Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Forward (+)

17794849 .. 17796973

Gene Structure 2125 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g21390.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGGCCAGGTCTTTAGCTCTCTCTCTCTGCTTGCTTGTTCTCTTTCATGGCTGCTCAGCCTATCGCCAACAATCTCCGTCCAGCCAGCAAAATGAGTGCATGCTGAACCAGATCCAAGCCCGCGAGCCCGACAACCGCATTGAGACCGAGGCGGGTCGGATCGAGTCATGGGACTACAACCAGGATGACTTCCAGTGCGCCGGAGTCGCCGTTCAGAGAATCACCGTCGAGCGCAACGGCCTTCACTTGCCTTTTTACACCAACAGTCCTCGCCTCCTTTACGTTGTCCAAGGTAGGGGTCAACTAGGAATGGTGATCCCCGGATGTCCCGAGACTTTCGAAGAAACCGAGCAATCTTACGAGGAACAACTACAGGGCTCGCAACAGCAAGGGCAAGGGCAACAAGGTCGCCAGCAAATTGGACGCCGACAAGGCCAACAGGGACAACAAGAGAGCTTCGAACAGCTAGACCGACACCAGAAAGTGCGACCCGTCAAGGAAGGTGACGTTATCGCCGTCCCCGCCGGAGTCACAACCTGGTCCTACAACGACGGTGACCAATCTCTTGTTTTCGTCTGTCTTCAAGACACCAGCAACCTTCACAACCAACTTGACCAAATCCCAAGGCGATTCTATCTTGCTGGTAACCCACAAGATGAGTTCACCCAACAAGGCCAAAGCCGACATTCGATCGCGAGACAACAGGGAAAGATCAGACACCAACAACAGGGAAACAACAACAACAACGTCTTTGCCGGCTTCGACACCAGACTCCTTGCCGATGCTCTCAACATCGACCAACAGACCGCCCAACAGCTCCAGGGACAGAACGACAACAGGCCACAGATCGTTAGGGTTCAGGGACGCCTCGACTTCGTCCAGCCCCCAGAGTCAATGAGGGAGGAAAGACAACAACAAGGACGACAAGGACAGAATGGTTTTGAGGAGGTATTCTGCCACATGAAGATGAAGCAGAACATCGGCAAGCCTTCAATGGCTGACGTCTTCAGCCCACAAGCCGGTCGCATCAGCGTCCTCAATGGCCTTAGCATGCCCGTTCTCAGGCACCTCCGTCTCAGCGCTGAGAGAGGCTTCTTCTACAACAACGCTATCTACAGCCCACACTGGAACTTGAACGCCCATGAAGTGTACTACGTCATCAGGGGCAGCGCTAGGGTTCAGGTGGTGAACGACAACGGTGAGACCATCTTGGACGACCAGGTCCGCCAGGGACAGCTCTTCATCGTGCCGCAGAACCACGCCGTGCTGCAAAAGGCCATGAGCAATGGATACGAGTACATTGCCTTCAAGACACAAGACAATGCCATAATCAACACCTTGGCTGGCAGGACCTCCGTCCTCCGGGCACTCCCCGACGTGGTCCTCGCCAATGCTTACCAGATGGACCGTCAGCAGGCAAGGAACCTCAAGTACAACAGGCAGGAGACTGTTGCCTTGAGCTCCTCAAGATCTTTCCAGTCCGAGAGGGCTAGTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

500

Amino Acids

56.61

Weight (kDa)

6.84

Isoelectric Point (pI)

60.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	39 - 217	3e-27	Cupin
Cupin_1	PF00190	286 - 369	2.4e-08	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1220
AatII	GACGTC	1 cut(s)	1005
AccB1I	GGYRCC	1 cut(s)	1065
AccII	CGCG	2 cut(s)	123, 695
AciI	CCGC	7 cut(s)	121, 136, 152, 522, 807, 1225, 1250
AclWI	GGATC	3 cut(s)	106, 167, 310
AcoI	YGGCCR	1 cut(s)	3
AcuI	CTGAAG	1 cut(s)	991
AcyI	GRCGYC	3 cut(s)	424, 865, 1002
AdeI	CACNNNGTG	1 cut(s)	1264
AfaI	GTAC	3 cut(s)	1151, 1298, 1433
AfeI	AGCGCT	2 cut(s)	1081, 1171
AfiI	CCNNNNNNNGG	7 cut(s)	295, 727, 1019, 1062, 1362, 1378, 1414
AgsI	TTSAA	4 cut(s)	584, 993, 1135, 1309
AjiI	CACGTC	1 cut(s)	1378
AjnI	CCWGG	6 cut(s)	5, 180, 536, 819, 1218, 1227
AloI	GAACNNNNNNTCC	2 cut(s)	195, 227
AluBI	AGCT	6 cut(s)	17, 456, 466, 817, 1237, 1461
AluI	AGCT	6 cut(s)	17, 456, 466, 817, 1237, 1461
Alw21I	GWGCWC	1 cut(s)	1463
Alw26I	GTCTC	6 cut(s)	137, 326, 691, 1079, 1196, 1439
AlwI	GGATC	3 cut(s)	106, 167, 310
Ama87I	CYCGRG	1 cut(s)	329
Aor51HI	AGCGCT	2 cut(s)	1081, 1171
AoxI	GGCC	7 cut(s)	3, 238, 433, 673, 839, 1042, 1275
ApeKI	GCWGC	3 cut(s)	51, 1167, 1267
AspLEI	GCGC	4 cut(s)	200, 234, 1082, 1172
AspS9I	GGNCC	5 cut(s)	540, 1222, 1350, 1381, 1405
AsuC2I	CCSGG	2 cut(s)	321, 1364
AsuHPI	GGTGA	7 cut(s)	214, 325, 515, 566, 655, 1198, 1211
AsuII	TTCGAA	2 cut(s)	339, 459
AvaI	CYCGRG	1 cut(s)	329
AvaII	GGWCC	5 cut(s)	540, 1222, 1350, 1381, 1405
BaeGI	GKGCMC	1 cut(s)	1369
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	1065
BanII	GRGCYC	3 cut(s)	129, 380, 1463
BarI	GAAGNNNNNNTAC	2 cut(s)	1289, 1321
BbsI	GAAGAC	2 cut(s)	572, 997
Bbv12I	GWGCWC	1 cut(s)	1463
BbvI	GCAGC	3 cut(s)	38, 1179, 1254
BccI	CCATC	2 cut(s)	1214, 1396
BceAI	ACGGC	4 cut(s)	194, 253, 500, 1247
BcgI	CGANNNNNNTGC	4 cut(s)	389, 423, 1283, 1317
BciT130I	CCWGG	6 cut(s)	7, 182, 538, 821, 1220, 1229
BciVI	GTATCC	1 cut(s)	1283
BcnI	CCSGG	2 cut(s)	321, 1364
BcoDI	GTCTC	6 cut(s)	137, 326, 691, 1079, 1196, 1439
BfaI	CTAG	4 cut(s)	305, 467, 1173, 1491
BfmI	CTRYAG	2 cut(s)	371, 1114
BfoI	RGCGCY	2 cut(s)	1083, 1173
BfuI	GTATCC	1 cut(s)	1283
BglI	GCCNNNNNGGC	1 cut(s)	432
BglII	AGATCT	1 cut(s)	1469
BisI	GCNGC	4 cut(s)	52, 1168, 1250, 1268
BlpI	GCTNAGC	1 cut(s)	55
BlsI	GCNGC	4 cut(s)	53, 1169, 1251, 1269
Bme1390I	CCNGG	8 cut(s)	7, 182, 321, 538, 821, 1220, 1229, 1364
Bme18I	GGWCC	5 cut(s)	540, 1222, 1350, 1381, 1405
BmeT110I	CYCGRG	1 cut(s)	329
BmgBI	CACGTC	1 cut(s)	1378
BmgT120I	GGNCC	5 cut(s)	540, 1222, 1350, 1381, 1405
BmiI	GGNNCC	2 cut(s)	1067, 1424
BmrFI	CCNGG	8 cut(s)	7, 182, 321, 538, 821, 1220, 1229, 1364
BmsI	GCATC	2 cut(s)	772, 1035
BoxI	GACNNNNGTC	1 cut(s)	1355
BpiI	GAAGAC	2 cut(s)	572, 997
BpmI	CTGGAG	1 cut(s)	803
Bpu10I	CCTNAGC	1 cut(s)	1046
Bpu1102I	GCTNAGC	1 cut(s)	55
Bpu14I	TTCGAA	2 cut(s)	339, 459
BpuEI	CTTGAG	3 cut(s)	1412, 1450, 1477
BpuMI	CCSGG	2 cut(s)	321, 1364
BsaHI	GRCGYC	3 cut(s)	424, 865, 1002
BsaI	GGTCTC	2 cut(s)	137, 1196
BsaJI	CCNNGG	7 cut(s)	147, 289, 319, 623, 820, 1228, 1338
BsaXI	ACNNNNNCTCC	2 cut(s)	195, 225
Bsc4I	CCNNNNNNNGG	7 cut(s)	295, 727, 1019, 1062, 1362, 1378, 1414
Bse118I	RCCGGY	2 cut(s)	755, 1019
Bse1I	ACTGG	3 cut(s)	193, 1130, 1477
Bse3DI	GCAATG	2 cut(s)	1291, 1299
BseBI	CCWGG	6 cut(s)	7, 182, 538, 821, 1220, 1229
BseDI	CCNNGG	7 cut(s)	147, 289, 319, 623, 820, 1228, 1338
BseGI	GGATG	2 cut(s)	190, 329
BseLI	CCNNNNNNNGG	7 cut(s)	295, 727, 1019, 1062, 1362, 1378, 1414
BseMI	GCAATG	2 cut(s)	1291, 1299
BseMII	CTCAG	4 cut(s)	69, 1074, 1075, 1090
BseNI	ACTGG	3 cut(s)	193, 1130, 1477
BseRI	GAGGAG	2 cut(s)	959, 1453
BseSI	GKGCMC	1 cut(s)	1369
BseXI	GCAGC	3 cut(s)	38, 1179, 1254
Bsh1236I	CGCG	2 cut(s)	123, 695
Bsh1285I	CGRYCG	2 cut(s)	693, 1024
BshFI	GGCC	7 cut(s)	5, 240, 435, 675, 841, 1044, 1277
BshNI	GGYRCC	1 cut(s)	1065
BsiEI	CGRYCG	2 cut(s)	693, 1024
BsiHKAI	GWGCWC	1 cut(s)	1463
BsiHKCI	CYCGRG	1 cut(s)	329
BsiSI	CCGG	6 cut(s)	201, 321, 525, 756, 1020, 1363
BslFI	GGGAC	7 cut(s)	185, 312, 456, 503, 837, 876, 1245
BslI	CCNNNNNNNGG	7 cut(s)	295, 727, 1019, 1062, 1362, 1378, 1414
BsmAI	GTCTC	6 cut(s)	137, 326, 691, 1079, 1196, 1439
BsmBI	CGTCTC	1 cut(s)	1079
BsmFI	GGGAC	7 cut(s)	185, 312, 456, 503, 837, 876, 1245
BsnI	GGCC	7 cut(s)	5, 240, 435, 675, 841, 1044, 1277
Bso31I	GGTCTC	2 cut(s)	137, 1196
BsoBI	CYCGRG	1 cut(s)	329
Bsp119I	TTCGAA	2 cut(s)	339, 459
Bsp1286I	GDGCHC	4 cut(s)	129, 380, 1369, 1463
Bsp143I	GATC	7 cut(s)	111, 159, 315, 690, 711, 846, 1469
Bsp1720I	GCTNAGC	1 cut(s)	55
Bsp68I	TCGCGA	1 cut(s)	695
BspACI	CCGC	7 cut(s)	121, 136, 152, 522, 807, 1225, 1250
BspANI	GGCC	7 cut(s)	5, 240, 435, 675, 841, 1044, 1277
BspCNI	CTCAG	4 cut(s)	68, 1074, 1075, 1089
BspFNI	CGCG	2 cut(s)	123, 695
BspLI	GGNNCC	2 cut(s)	1067, 1424
BspPI	GGATC	3 cut(s)	106, 167, 310
BspQI	GCTCTTC	1 cut(s)	1244
BspT104I	TTCGAA	2 cut(s)	339, 459
BspT107I	GGYRCC	1 cut(s)	1065
BspTNI	GGTCTC	2 cut(s)	137, 1196
BsrDI	GCAATG	2 cut(s)	1291, 1299
BsrFI	RCCGGY	2 cut(s)	755, 1019
BsrI	ACTGG	3 cut(s)	193, 1130, 1477
BssAI	RCCGGY	2 cut(s)	755, 1019
BssECI	CCNNGG	7 cut(s)	147, 289, 319, 623, 820, 1228, 1338
BssMI	GATC	7 cut(s)	111, 159, 315, 690, 711, 846, 1469
BssNI	GRCGYC	3 cut(s)	424, 865, 1002
BssT1I	CCWWGG	3 cut(s)	289, 623, 1338
Bst2UI	CCWGG	6 cut(s)	7, 182, 538, 821, 1220, 1229
Bst4CI	ACNGT	6 cut(s)	226, 266, 554, 1199, 1409, 1450
Bst6I	CTCTTC	1 cut(s)	1244
BstACI	GRCGYC	3 cut(s)	424, 865, 1002
BstBI	TTCGAA	2 cut(s)	339, 459
BstDEI	CTNAG	5 cut(s)	55, 1046, 1061, 1076, 1083
BstEII	GGTNACC	2 cut(s)	554, 644
BstF5I	GGATG	2 cut(s)	190, 329
BstFNI	CGCG	2 cut(s)	123, 695
BstH2I	RGCGCY	2 cut(s)	1083, 1173
BstHHI	GCGC	4 cut(s)	200, 234, 1082, 1172
BstKTI	GATC	7 cut(s)	114, 162, 318, 693, 714, 849, 1472
BstMAI	GTCTC	6 cut(s)	137, 326, 691, 1079, 1196, 1439
BstMBI	GATC	7 cut(s)	111, 159, 315, 690, 711, 846, 1469
BstMCI	CGRYCG	2 cut(s)	693, 1024
BstMWI	GCNNNNNNNGC	3 cut(s)	206, 432, 521
BstNI	CCWGG	6 cut(s)	7, 182, 538, 821, 1220, 1229
BstNSI	RCATGY	2 cut(s)	103, 1054
BstPAI	GACNNNNGTC	1 cut(s)	1355
BstPI	GGTNACC	2 cut(s)	554, 644
BstSCI	CCNGG	8 cut(s)	5, 180, 319, 536, 819, 1218, 1227, 1362
BstSFI	CTRYAG	2 cut(s)	371, 1114
BstSLI	GKGCMC	1 cut(s)	1369
BstUI	CGCG	2 cut(s)	123, 695
BstV1I	GCAGC	3 cut(s)	38, 1179, 1254
BstV2I	GAAGAC	2 cut(s)	572, 997
BstX2I	RGATCY	2 cut(s)	111, 1469
BstXI	CCANNNNNNTGG	1 cut(s)	419
BstYI	RGATCY	2 cut(s)	111, 1469
BsuI	GTATCC	1 cut(s)	1283
BsuRI	GGCC	7 cut(s)	5, 240, 435, 675, 841, 1044, 1277
BtrI	CACGTC	1 cut(s)	1378
BtsCI	GGATG	2 cut(s)	190, 329
BtsIMutI	CAGTG	2 cut(s)	200, 1123
BtuMI	TCGCGA	1 cut(s)	695
CfoI	GCGC	4 cut(s)	200, 234, 1082, 1172
Cfr10I	RCCGGY	2 cut(s)	755, 1019
Cfr13I	GGNCC	5 cut(s)	540, 1222, 1350, 1381, 1405
CseI	GACGC	3 cut(s)	432, 873, 1021
CsiI	ACCWGGT	2 cut(s)	536, 1218
Csp6I	GTAC	3 cut(s)	1150, 1297, 1432
CviAII	CATG	7 cut(s)	47, 100, 168, 961, 1051, 1142, 1279
CviQI	GTAC	3 cut(s)	1150, 1297, 1432
DdeI	CTNAG	5 cut(s)	55, 1046, 1061, 1076, 1083
DpnI	GATC	7 cut(s)	113, 161, 317, 692, 713, 848, 1471
DpnII	GATC	7 cut(s)	111, 159, 315, 690, 711, 846, 1469
DraIII	CACNNNGTG	1 cut(s)	1264
DrdI	GACNNNNNNGTC	1 cut(s)	1220
DseDI	GACNNNNNNGTC	1 cut(s)	1220
EaeI	YGGCCR	1 cut(s)	3
Eam1104I	CTCTTC	1 cut(s)	1244
EarI	CTCTTC	1 cut(s)	1244
EciI	GGCGGA	1 cut(s)	1214
Ecl136II	GAGCTC	1 cut(s)	1461
Eco130I	CCWWGG	3 cut(s)	289, 623, 1338
Eco24I	GRGCYC	3 cut(s)	129, 380, 1463
Eco31I	GGTCTC	2 cut(s)	137, 1196
Eco47I	GGWCC	5 cut(s)	540, 1222, 1350, 1381, 1405
Eco47III	AGCGCT	2 cut(s)	1081, 1171
Eco53kI	GAGCTC	1 cut(s)	1461
Eco57I	CTGAAG	1 cut(s)	991
Eco88I	CYCGRG	1 cut(s)	329
Eco91I	GGTNACC	2 cut(s)	554, 644
EcoICRI	GAGCTC	1 cut(s)	1461
EcoO109I	RGGNCCY	1 cut(s)	1350
EcoO65I	GGTNACC	2 cut(s)	554, 644
EcoRII	CCWGG	6 cut(s)	5, 180, 536, 819, 1218, 1227
EcoT14I	CCWWGG	3 cut(s)	289, 623, 1338
EcoT38I	GRGCYC	3 cut(s)	129, 380, 1463
ErhI	CCWWGG	3 cut(s)	289, 623, 1338
Esp3I	CGTCTC	1 cut(s)	1079
FaeI	CATG	7 cut(s)	50, 103, 171, 964, 1054, 1145, 1282
FaiI	YATR	8 cut(s)	48, 101, 169, 962, 1052, 1143, 1280, 1328
FaqI	GGGAC	7 cut(s)	185, 312, 456, 503, 837, 876, 1245
FatI	CATG	7 cut(s)	46, 99, 167, 960, 1050, 1141, 1278
FauI	CCCGC	3 cut(s)	128, 145, 529
Fnu4HI	GCNGC	4 cut(s)	52, 1168, 1250, 1268
FokI	GGATG	2 cut(s)	197, 336
FriOI	GRGCYC	3 cut(s)	129, 380, 1463
Fsp4HI	GCNGC	4 cut(s)	52, 1168, 1250, 1268
FspBI	CTAG	4 cut(s)	305, 467, 1173, 1491
GlaI	GCGC	4 cut(s)	199, 233, 1081, 1171
GluI	GCNGC	4 cut(s)	52, 1168, 1250, 1268
GsuI	CTGGAG	1 cut(s)	803
HaeII	RGCGCY	2 cut(s)	1083, 1173
HaeIII	GGCC	7 cut(s)	5, 240, 435, 675, 841, 1044, 1277
HapII	CCGG	6 cut(s)	201, 321, 525, 756, 1020, 1363
HgaI	GACGC	3 cut(s)	432, 873, 1021
HhaI	GCGC	4 cut(s)	200, 234, 1082, 1172
Hin1I	GRCGYC	3 cut(s)	424, 865, 1002
Hin1II	CATG	7 cut(s)	50, 103, 171, 964, 1054, 1145, 1282
Hin6I	GCGC	4 cut(s)	198, 232, 1080, 1170
HinP1I	GCGC	4 cut(s)	198, 232, 1080, 1170
HincII	GTYRAC	1 cut(s)	302
HindII	GTYRAC	1 cut(s)	302
HinfI	GANTC	7 cut(s)	164, 204, 219, 528, 630, 771, 890
HpaII	CCGG	6 cut(s)	201, 321, 525, 756, 1020, 1363
HphI	GGTGA	7 cut(s)	214, 325, 515, 566, 655, 1198, 1211
Hpy166II	GTNNAC	4 cut(s)	302, 663, 1150, 1189
Hpy188I	TCNGA	4 cut(s)	159, 216, 716, 1483
Hpy188III	TCNNGA	5 cut(s)	329, 584, 694, 1309, 1467
Hpy8I	GTNNAC	4 cut(s)	302, 663, 1150, 1189
Hpy99I	CGWCG	3 cut(s)	230, 554, 1379
HpyAV	CCTTC	5 cut(s)	251, 494, 608, 999, 1315
HpyCH4III	ACNGT	6 cut(s)	226, 266, 554, 1199, 1409, 1450
HpyCH4IV	ACGT	6 cut(s)	282, 507, 747, 1002, 1155, 1377
HpyCH4V	TGCA	2 cut(s)	99, 1270
HpyF10VI	GCNNNNNNNGC	3 cut(s)	206, 432, 521
HpyF3I	CTNAG	5 cut(s)	55, 1046, 1061, 1076, 1083
HpySE526I	ACGT	6 cut(s)	282, 507, 747, 1002, 1155, 1377
Hsp92I	GRCGYC	3 cut(s)	424, 865, 1002
Hsp92II	CATG	7 cut(s)	50, 103, 171, 964, 1054, 1145, 1282
HspAI	GCGC	4 cut(s)	198, 232, 1080, 1170
KroI	GCCGGC	1 cut(s)	755
KroNI	GCCGGC	1 cut(s)	757
Kzo9I	GATC	7 cut(s)	111, 159, 315, 690, 711, 846, 1469
LguI	GCTCTTC	1 cut(s)	1244
LmnI	GCTCC	2 cut(s)	822, 1466
Lsp1109I	GCAGC	3 cut(s)	38, 1179, 1254
LweI	GCATC	2 cut(s)	772, 1035
MabI	ACCWGGT	2 cut(s)	536, 1218
MaeI	CTAG	4 cut(s)	305, 467, 1173, 1491
MaeII	ACGT	6 cut(s)	282, 507, 747, 1002, 1155, 1377
MaeIII	GTNAC	4 cut(s)	503, 529, 554, 644
MalI	GATC	7 cut(s)	113, 161, 317, 692, 713, 848, 1471
MboI	GATC	7 cut(s)	111, 159, 315, 690, 711, 846, 1469
MboII	GAAGA	6 cut(s)	353, 572, 976, 997, 1087, 1231
MflI	RGATCY	2 cut(s)	111, 1469
MhlI	GDGCHC	4 cut(s)	129, 380, 1369, 1463
MlsI	TGGCCA	1 cut(s)	5
MluCI	AATT	1 cut(s)	417
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	5 cut(s)	173, 213, 537, 765, 899
MmeI	TCCRAC	1 cut(s)	137
Mox20I	TGGCCA	1 cut(s)	5
MroNI	GCCGGC	1 cut(s)	755
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	1 cut(s)	1498
MslI	CAYNNNNRTG	1 cut(s)	965
Msp20I	TGGCCA	1 cut(s)	5
MspI	CCGG	6 cut(s)	201, 321, 525, 756, 1020, 1363
MspR9I	CCNGG	8 cut(s)	7, 182, 321, 538, 821, 1220, 1229, 1364
MvaI	CCWGG	6 cut(s)	7, 182, 538, 821, 1220, 1229
MvnI	CGCG	2 cut(s)	123, 695
MwoI	GCNNNNNNNGC	3 cut(s)	206, 432, 521
NaeI	GCCGGC	1 cut(s)	757
NciI	CCSGG	2 cut(s)	321, 1364
NdeII	GATC	7 cut(s)	111, 159, 315, 690, 711, 846, 1469
NgoMIV	GCCGGC	1 cut(s)	755
NlaIII	CATG	7 cut(s)	50, 103, 171, 964, 1054, 1145, 1282
NlaIV	GGNNCC	2 cut(s)	1067, 1424
NmuCI	GTSAC	3 cut(s)	503, 529, 554
NruI	TCGCGA	1 cut(s)	695
NspI	RCATGY	2 cut(s)	103, 1054
NspV	TTCGAA	2 cut(s)	339, 459
PaeI	GCATGC	2 cut(s)	103, 1054
PciSI	GCTCTTC	1 cut(s)	1244
PcsI	WCGNNNNNNNCGW	2 cut(s)	345, 513
PdiI	GCCGGC	1 cut(s)	757
PfeI	GAWTC	2 cut(s)	219, 630
PflFI	GACNNNGTC	3 cut(s)	875, 1220, 1379
PkrI	GCNGC	4 cut(s)	53, 1169, 1251, 1269
Ple19I	CGATCG	1 cut(s)	693
PleI	GAGTC	5 cut(s)	172, 212, 536, 765, 898
PpsI	GAGTC	5 cut(s)	172, 212, 536, 765, 898
PpuMI	RGGWCCY	1 cut(s)	1350
PshAI	GACNNNNGTC	1 cut(s)	1355
Psp124BI	GAGCTC	1 cut(s)	1463
Psp5II	RGGWCCY	1 cut(s)	1350
Psp6I	CCWGG	6 cut(s)	5, 180, 536, 819, 1218, 1227
PspEI	GGTNACC	2 cut(s)	554, 644
PspGI	CCWGG	6 cut(s)	5, 180, 536, 819, 1218, 1227
PspN4I	GGNNCC	2 cut(s)	1067, 1424
PspPI	GGNCC	5 cut(s)	540, 1222, 1350, 1381, 1405
PspPPI	RGGWCCY	1 cut(s)	1350
PsrI	GAACNNNNNNTAC	2 cut(s)	1415, 1447
PsuI	RGATCY	2 cut(s)	111, 1469
PsyI	GACNNNGTC	3 cut(s)	875, 1220, 1379
PvuI	CGATCG	1 cut(s)	693
RruI	TCGCGA	1 cut(s)	695
RsaI	GTAC	3 cut(s)	1151, 1298, 1433
RsaNI	GTAC	3 cut(s)	1150, 1297, 1432
RseI	CAYNNNNRTG	1 cut(s)	965
SacI	GAGCTC	1 cut(s)	1463
SapI	GCTCTTC	1 cut(s)	1244
SaqAI	TTAA	1 cut(s)	1498
SatI	GCNGC	4 cut(s)	52, 1168, 1250, 1268
Sau3AI	GATC	7 cut(s)	111, 159, 315, 690, 711, 846, 1469
Sau96I	GGNCC	5 cut(s)	540, 1222, 1350, 1381, 1405
SchI	GAGTC	5 cut(s)	173, 213, 537, 765, 899
ScrFI	CCNGG	8 cut(s)	7, 182, 321, 538, 821, 1220, 1229, 1364
SduI	GDGCHC	4 cut(s)	129, 380, 1369, 1463
SexAI	ACCWGGT	2 cut(s)	536, 1218
SfaNI	GCATC	2 cut(s)	772, 1035
SfcI	CTRYAG	2 cut(s)	371, 1114
SfuI	TTCGAA	2 cut(s)	339, 459
SinI	GGWCC	5 cut(s)	540, 1222, 1350, 1381, 1405
SmiMI	CAYNNNNRTG	1 cut(s)	965
SmlI	CTYRAG	3 cut(s)	1427, 1456, 1465
SmoI	CTYRAG	3 cut(s)	1427, 1456, 1465
SphI	GCATGC	2 cut(s)	103, 1054
Sse9I	AATT	1 cut(s)	417
SsiI	CCGC	7 cut(s)	121, 136, 152, 522, 807, 1225, 1250
SspMI	CTAG	4 cut(s)	305, 467, 1173, 1491
SstI	GAGCTC	1 cut(s)	1463
StyD4I	CCNGG	8 cut(s)	5, 180, 319, 536, 819, 1218, 1227, 1362
StyI	CCWWGG	3 cut(s)	289, 623, 1338
TaaI	ACNGT	6 cut(s)	226, 266, 554, 1199, 1409, 1450
TaiI	ACGT	6 cut(s)	285, 510, 750, 1005, 1158, 1380
TaqI	TCGA	8 cut(s)	162, 228, 339, 459, 689, 762, 795, 870
TaqII	GACCGA	2 cut(s)	161, 486
TasI	AATT	1 cut(s)	417
TatI	WGTACW	3 cut(s)	1149, 1296, 1431
TauI	GCSGC	1 cut(s)	1252
TfiI	GAWTC	2 cut(s)	219, 630
Tru1I	TTAA	1 cut(s)	1498
Tru9I	TTAA	1 cut(s)	1498
TscAI	CASTG	2 cut(s)	200, 1130
TseFI	GTSAC	3 cut(s)	503, 529, 554
TseI	GCWGC	3 cut(s)	51, 1167, 1267
Tsp45I	GTSAC	3 cut(s)	503, 529, 554
TspDTI	ATGAA	5 cut(s)	35, 977, 983, 1158, 1231
TspGWI	ACGGA	3 cut(s)	66, 1061, 1345
TspRI	CASTG	2 cut(s)	200, 1130
Tth111I	GACNNNGTC	3 cut(s)	875, 1220, 1379
VpaK11BI	GGWCC	5 cut(s)	540, 1222, 1350, 1381, 1405
XceI	RCATGY	2 cut(s)	103, 1054
XspI	CTAG	4 cut(s)	305, 467, 1173, 1491
ZraI	GACGTC	1 cut(s)	1003

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.