Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001117.1

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Reverse (-)

23287 .. 25279

Gene Structure 1993 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001117.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

atggctaagcctatagctctcgccttttctctttgcttgcttgtcctcttccacagctgcttagcagctcgccaacaatctcagtcaagccagaagaacgagtgccagctagatcagctccaagctcgcgaacctgataaccgcattgagactgaagcgggtaggatcgagtcatgggactacaaccgcgacgacttccagtgcgctggtgttgctgttcaacgaatcaccattgaaagaaatggccttcacttgccttcttacacccacgctccacaactcatttacatagtccaaggaagtggttttctatctactgtatttcctggctgtcctgagactttcgaagaatctgaacaatctgatgaagaacaacaagggcaagggcagcaggggcgccatggacagcaaggccgtggacaacggggtcaacaagaacaagaagaggaagaacaacaacaacgccaacgccaacagggacaacaaggccatggacagcatgatagacaacaaggacagcaaggccaacggggacaagagagcttcgaacagctagacagacaccagaaggttcgacgcataaaagaaggtgatattgttgctattcctgccggagtcacctactggtcctacaatgacggtgaccaacctcttgttgctgtcagtcttcttgacatcagcaacaaccaaaaccagcttgatcgtaaccctaggagattctatcttgctggtaacccacaagatgagtttaaacaacaagggcaaagccagagtcgaaggggccagcaaggacgtggacaagaagggcaaggccaaagtcaatgggaccaggaccaggaccagcaacagcaacagcaaggaggaaggagcaggcaccagcaacaacagcatggaaacaacaacaacaacatcttcgctggcttcaacacacagctcctcgctgacgctctgaacatcgaccaacagactgcgcagcagcttcagggacaaaacgacaacagaccccaaatcgtcagagttagaggacgtcttgattttatccagccgccacagtcacaacaggaggaaagacaagaacagggaattcagagacaacagggacagaatggtcttgaggaaactctctgcaactggaagatcagagagaatattggcaggccttcacgtgctgacgtcttcagtccccaagccggtcgcatcagcaccctcaacagctttaagttgcctattctcaggtaccttgacctcagcgctgagagaggcttcttctacaataatgctatctacagcccacactggaacttgaacgcccacgaagtgtactacgtcattcgaggtagcgctagggttcaggttgtgaacgacaacggccaggccatcttggacaacgaagtccgccagggacagctcttcattgtgccacagaaccacgcagtgttacaaaaggctagcaacaacggctacgagtacattgccttcaagacccaggacaatgccaagattaacactctggcaggccggacctcagtcttgcgggcactccccgacgtcgtccttgctaacgcataccagattgaccgacaacaggcaaggaatctcaaatacaacagacaggagactgttgctttgagctcttcaaggtcttcccaatcccagaggagctggtgggctattgcataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

559

Amino Acids

63.76

Weight (kDa)

6.49

Isoelectric Point (pI)

63.96

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	426, 1107, 1391
AatII	GACGTC	3 cut(s)	1030, 1176, 1551
Acc16I	TGCGCA	1 cut(s)	972
Acc65I	GGTACC	1 cut(s)	1236
AccB1I	GGYRCC	3 cut(s)	396, 873, 1236
AccII	CGCG	2 cut(s)	129, 189
AciI	CCGC	6 cut(s)	142, 158, 187, 1046, 1396, 1534
AclWI	GGATC	1 cut(s)	173
AcoI	YGGCCR	1 cut(s)	1369
AcsI	RAATTY	1 cut(s)	1083
AcuI	CTGAAG	3 cut(s)	174, 965, 1162
AcvI	CACGTG	1 cut(s)	1166
AcyI	GRCGYC	4 cut(s)	397, 1027, 1173, 1548
AdeI	CACNNNGTG	2 cut(s)	1318, 1435
AfaI	GTAC	3 cut(s)	1238, 1322, 1469
AfeI	AGCGCT	2 cut(s)	1252, 1342
AfiI	CCNNNNNNNGG	3 cut(s)	835, 1190, 1585
AgsI	TTSAA	6 cut(s)	221, 236, 925, 1306, 1480, 1638
AjiI	CACGTC	1 cut(s)	794
AjnI	CCWGG	6 cut(s)	325, 828, 834, 1371, 1398, 1485
Alw21I	GWGCWC	1 cut(s)	1634
Alw26I	GTCTC	4 cut(s)	143, 332, 1084, 1610
AlwI	GGATC	1 cut(s)	173
Aor51HI	AGCGCT	2 cut(s)	1252, 1342
ApeKI	GCWGC	5 cut(s)	57, 65, 388, 973, 976
ApoI	RAATTY	1 cut(s)	1083
ArsI	GACNNNNNNTTYG	4 cut(s)	757, 789, 1609, 1641
Asp718I	GGTACC	1 cut(s)	1236
AspA2I	CCTAGG	1 cut(s)	710
AspLEI	GCGC	5 cut(s)	206, 399, 973, 1253, 1343
AspS9I	GGNCC	6 cut(s)	627, 781, 826, 832, 838, 1521
AsuHPI	GGTGA	4 cut(s)	220, 602, 610, 653
AsuII	TTCGAA	2 cut(s)	345, 546
AsuNHI	GCTAGC	1 cut(s)	1448
AvaII	GGWCC	5 cut(s)	627, 826, 832, 838, 1521
AvrII	CCTAGG	1 cut(s)	710
BaeGI	GKGCMC	1 cut(s)	1540
BanI	GGYRCC	3 cut(s)	396, 873, 1236
BanII	GRGCYC	1 cut(s)	1634
BarI	GAAGNNNNNNTAC	2 cut(s)	1460, 1492
BbrPI	CACGTG	1 cut(s)	1166
BbsI	GAAGAC	3 cut(s)	659, 1168, 1635
Bbv12I	GWGCWC	1 cut(s)	1634
BbvCI	CCTCAGC	1 cut(s)	1247
BbvI	GCAGC	5 cut(s)	44, 77, 400, 985, 988
BccI	CCATC	1 cut(s)	1385
BceAI	ACGGC	3 cut(s)	399, 1384, 1474
BcgI	CGANNNNNNTGC	2 cut(s)	1454, 1488
BciT130I	CCWGG	6 cut(s)	327, 830, 836, 1373, 1400, 1487
BcoDI	GTCTC	4 cut(s)	143, 332, 1084, 1610
BfaI	CTAG	5 cut(s)	110, 554, 711, 1344, 1449
BfmI	CTRYAG	2 cut(s)	12, 1285
BfoI	RGCGCY	3 cut(s)	400, 1254, 1344
BisI	GCNGC	6 cut(s)	58, 66, 389, 974, 977, 1046
BlnI	CCTAGG	1 cut(s)	710
BlpI	GCTNAGC	2 cut(s)	6, 61
BlsI	GCNGC	6 cut(s)	59, 67, 390, 975, 978, 1047
Bme1390I	CCNGG	6 cut(s)	327, 830, 836, 1373, 1400, 1487
Bme18I	GGWCC	5 cut(s)	627, 826, 832, 838, 1521
BmgBI	CACGTC	1 cut(s)	794
BmgT120I	GGNCC	6 cut(s)	627, 781, 826, 832, 838, 1521
BmiI	GGNNCC	5 cut(s)	398, 782, 827, 875, 1238
BmrFI	CCNGG	6 cut(s)	327, 830, 836, 1373, 1400, 1487
BmsI	GCATC	1 cut(s)	1206
BmtI	GCTAGC	1 cut(s)	1452
BoxI	GACNNNNGTC	1 cut(s)	1526
BpiI	GAAGAC	3 cut(s)	659, 1168, 1635
Bpu10I	CCTNAGC	1 cut(s)	1247
Bpu1102I	GCTNAGC	2 cut(s)	6, 61
Bpu14I	TTCGAA	2 cut(s)	345, 546
BpuEI	CTTGAG	1 cut(s)	1133
BsaAI	YACGTR	1 cut(s)	1166
BsaHI	GRCGYC	4 cut(s)	397, 1027, 1173, 1548
BsaJI	CCNNGG	7 cut(s)	295, 400, 415, 490, 710, 1399, 1485
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	3 cut(s)	835, 1190, 1585
Bse118I	RCCGGY	1 cut(s)	1190
Bse1I	ACTGG	4 cut(s)	199, 629, 1136, 1301
Bse3DI	GCAATG	1 cut(s)	1470
BseBI	CCWGG	6 cut(s)	327, 830, 836, 1373, 1400, 1487
BseDI	CCNNGG	7 cut(s)	295, 400, 415, 490, 710, 1399, 1485
BseLI	CCNNNNNNNGG	3 cut(s)	835, 1190, 1585
BseMI	GCAATG	1 cut(s)	1470
BseMII	CTCAG	6 cut(s)	95, 327, 1245, 1246, 1261, 1539
BseNI	ACTGG	4 cut(s)	199, 629, 1136, 1301
BseRI	GAGGAG	2 cut(s)	926, 1672
BseSI	GKGCMC	1 cut(s)	1540
BseXI	GCAGC	5 cut(s)	44, 77, 400, 985, 988
Bsh1236I	CGCG	2 cut(s)	129, 189
Bsh1285I	CGRYCG	1 cut(s)	1195
BshNI	GGYRCC	3 cut(s)	396, 873, 1236
BsiEI	CGRYCG	1 cut(s)	1195
BsiHKAI	GWGCWC	1 cut(s)	1634
BsiSI	CCGG	3 cut(s)	612, 1191, 1519
BslFI	GGGAC	8 cut(s)	191, 492, 546, 839, 999, 1113, 1167, 1416
BslI	CCNNNNNNNGG	3 cut(s)	835, 1190, 1585
BsmAI	GTCTC	4 cut(s)	143, 332, 1084, 1610
BsmFI	GGGAC	8 cut(s)	191, 492, 546, 839, 999, 1113, 1167, 1416
Bsp119I	TTCGAA	2 cut(s)	345, 546
Bsp1286I	GDGCHC	2 cut(s)	1540, 1634
Bsp143I	GATC	4 cut(s)	112, 165, 700, 1137
Bsp1720I	GCTNAGC	2 cut(s)	6, 61
Bsp19I	CCATGG	2 cut(s)	400, 490
Bsp68I	TCGCGA	1 cut(s)	129
BspACI	CCGC	6 cut(s)	142, 158, 187, 1046, 1396, 1534
BspCNI	CTCAG	6 cut(s)	94, 328, 1245, 1246, 1260, 1538
BspFNI	CGCG	2 cut(s)	129, 189
BspLI	GGNNCC	5 cut(s)	398, 782, 827, 875, 1238
BspOI	GCTAGC	1 cut(s)	1452
BspPI	GGATC	1 cut(s)	173
BspQI	GCTCTTC	2 cut(s)	1415, 1639
BspT104I	TTCGAA	2 cut(s)	345, 546
BspT107I	GGYRCC	3 cut(s)	396, 873, 1236
BsrDI	GCAATG	1 cut(s)	1470
BsrFI	RCCGGY	1 cut(s)	1190
BsrI	ACTGG	4 cut(s)	199, 629, 1136, 1301
BssAI	RCCGGY	1 cut(s)	1190
BssECI	CCNNGG	7 cut(s)	295, 400, 415, 490, 710, 1399, 1485
BssMI	GATC	4 cut(s)	112, 165, 700, 1137
BssNI	GRCGYC	4 cut(s)	397, 1027, 1173, 1548
BssT1I	CCWWGG	4 cut(s)	295, 400, 490, 710
Bst2UI	CCWGG	6 cut(s)	327, 830, 836, 1373, 1400, 1487
Bst4CI	ACNGT	4 cut(s)	319, 641, 1053, 1621
Bst6I	CTCTTC	4 cut(s)	53, 438, 1415, 1639
BstACI	GRCGYC	4 cut(s)	397, 1027, 1173, 1548
BstBAI	YACGTR	1 cut(s)	1166
BstBI	TTCGAA	2 cut(s)	345, 546
BstDEI	CTNAG	8 cut(s)	6, 61, 81, 336, 1232, 1247, 1254, 1525
BstDSI	CCRYGG	3 cut(s)	400, 415, 490
BstEII	GGTNACC	2 cut(s)	641, 731
BstFNI	CGCG	2 cut(s)	129, 189
BstH2I	RGCGCY	3 cut(s)	400, 1254, 1344
BstHHI	GCGC	5 cut(s)	206, 399, 973, 1253, 1343
BstKTI	GATC	4 cut(s)	115, 168, 703, 1140
BstMAI	GTCTC	4 cut(s)	143, 332, 1084, 1610
BstMBI	GATC	4 cut(s)	112, 165, 700, 1137
BstMCI	CGRYCG	1 cut(s)	1195
BstMWI	GCNNNNNNNGC	7 cut(s)	115, 212, 388, 394, 608, 886, 1458
BstNI	CCWGG	6 cut(s)	327, 830, 836, 1373, 1400, 1487
BstPAI	GACNNNNGTC	1 cut(s)	1526
BstPI	GGTNACC	2 cut(s)	641, 731
BstSCI	CCNGG	6 cut(s)	325, 828, 834, 1371, 1398, 1485
BstSFI	CTRYAG	2 cut(s)	12, 1285
BstSLI	GKGCMC	1 cut(s)	1540
BstUI	CGCG	2 cut(s)	129, 189
BstV1I	GCAGC	5 cut(s)	44, 77, 400, 985, 988
BstV2I	GAAGAC	3 cut(s)	659, 1168, 1635
BstXI	CCANNNNNNTGG	2 cut(s)	206, 302
BtgI	CCRYGG	3 cut(s)	400, 415, 490
BtrI	CACGTC	1 cut(s)	794
BtsI	GCAGTG	1 cut(s)	1440
BtsIMutI	CAGTG	3 cut(s)	206, 1294, 1440
BtuMI	TCGCGA	1 cut(s)	129
CfoI	GCGC	5 cut(s)	206, 399, 973, 1253, 1343
Cfr10I	RCCGGY	1 cut(s)	1190
Cfr13I	GGNCC	6 cut(s)	627, 781, 826, 832, 838, 1521
CseI	GACGC	2 cut(s)	585, 953
Csp6I	GTAC	3 cut(s)	1237, 1321, 1468
CviAII	CATG	5 cut(s)	174, 401, 491, 500, 890
CviQI	GTAC	3 cut(s)	1237, 1321, 1468
DdeI	CTNAG	8 cut(s)	6, 61, 81, 336, 1232, 1247, 1254, 1525
DinI	GGCGCC	1 cut(s)	398
DpnI	GATC	4 cut(s)	114, 167, 702, 1139
DpnII	GATC	4 cut(s)	112, 165, 700, 1137
DraI	TTTAAA	1 cut(s)	751
DraIII	CACNNNGTG	2 cut(s)	1318, 1435
DrdI	GACNNNNNNGTC	3 cut(s)	426, 1107, 1391
DseDI	GACNNNNNNGTC	3 cut(s)	426, 1107, 1391
EaeI	YGGCCR	1 cut(s)	1369
Eam1104I	CTCTTC	4 cut(s)	53, 438, 1415, 1639
EarI	CTCTTC	4 cut(s)	53, 438, 1415, 1639
EciI	GGCGGA	1 cut(s)	1385
Ecl136II	GAGCTC	1 cut(s)	1632
Eco130I	CCWWGG	4 cut(s)	295, 400, 490, 710
Eco147I	AGGCCT	1 cut(s)	1159
Eco24I	GRGCYC	1 cut(s)	1634
Eco47I	GGWCC	5 cut(s)	627, 826, 832, 838, 1521
Eco47III	AGCGCT	2 cut(s)	1252, 1342
Eco53kI	GAGCTC	1 cut(s)	1632
Eco57I	CTGAAG	3 cut(s)	174, 965, 1162
Eco72I	CACGTG	1 cut(s)	1166
Eco91I	GGTNACC	2 cut(s)	641, 731
EcoICRI	GAGCTC	1 cut(s)	1632
EcoO65I	GGTNACC	2 cut(s)	641, 731
EcoRI	GAATTC	1 cut(s)	1083
EcoRII	CCWGG	6 cut(s)	325, 828, 834, 1371, 1398, 1485
EcoT14I	CCWWGG	4 cut(s)	295, 400, 490, 710
EcoT38I	GRGCYC	1 cut(s)	1634
EgeI	GGCGCC	1 cut(s)	398
EheI	GGCGCC	1 cut(s)	398
ErhI	CCWWGG	4 cut(s)	295, 400, 490, 710
FaeI	CATG	5 cut(s)	177, 404, 494, 503, 893
FaqI	GGGAC	8 cut(s)	191, 492, 546, 839, 999, 1113, 1167, 1416
FatI	CATG	5 cut(s)	173, 400, 490, 499, 889
FauI	CCCGC	2 cut(s)	151, 1527
Fnu4HI	GCNGC	6 cut(s)	58, 66, 389, 974, 977, 1046
FriOI	GRGCYC	1 cut(s)	1634
Fsp4HI	GCNGC	6 cut(s)	58, 66, 389, 974, 977, 1046
FspBI	CTAG	5 cut(s)	110, 554, 711, 1344, 1449
FspI	TGCGCA	1 cut(s)	972
GlaI	GCGC	5 cut(s)	205, 398, 972, 1252, 1342
GluI	GCNGC	6 cut(s)	58, 66, 389, 974, 977, 1046
HaeII	RGCGCY	3 cut(s)	400, 1254, 1344
HapII	CCGG	3 cut(s)	612, 1191, 1519
HgaI	GACGC	2 cut(s)	585, 953
HhaI	GCGC	5 cut(s)	206, 399, 973, 1253, 1343
Hin1I	GRCGYC	4 cut(s)	397, 1027, 1173, 1548
Hin1II	CATG	5 cut(s)	177, 404, 494, 503, 893
Hin6I	GCGC	5 cut(s)	204, 397, 971, 1251, 1341
HinP1I	GCGC	5 cut(s)	204, 397, 971, 1251, 1341
HincII	GTYRAC	1 cut(s)	431
HindII	GTYRAC	1 cut(s)	431
HinfI	GANTC	7 cut(s)	170, 225, 350, 615, 717, 772, 1594
HpaII	CCGG	3 cut(s)	612, 1191, 1519
HphI	GGTGA	4 cut(s)	220, 602, 610, 653
Hpy166II	GTNNAC	5 cut(s)	419, 431, 797, 1321, 1360
Hpy188I	TCNGA	6 cut(s)	355, 364, 951, 1016, 1089, 1142
Hpy188III	TCNNGA	6 cut(s)	128, 335, 671, 1031, 1112, 1480
Hpy8I	GTNNAC	5 cut(s)	419, 431, 797, 1321, 1360
Hpy99I	CGWCG	4 cut(s)	194, 579, 1550, 1553
HpyAV	CCTTC	9 cut(s)	257, 267, 562, 581, 771, 797, 858, 1170, 1486
HpyCH4III	ACNGT	4 cut(s)	319, 641, 1053, 1621
HpyCH4IV	ACGT	6 cut(s)	793, 1027, 1165, 1173, 1326, 1548
HpyCH4V	TGCA	2 cut(s)	1128, 1676
HpyF10VI	GCNNNNNNNGC	7 cut(s)	115, 212, 388, 394, 608, 886, 1458
HpyF3I	CTNAG	8 cut(s)	6, 61, 81, 336, 1232, 1247, 1254, 1525
HpySE526I	ACGT	6 cut(s)	793, 1027, 1165, 1173, 1326, 1548
Hsp92I	GRCGYC	4 cut(s)	397, 1027, 1173, 1548
Hsp92II	CATG	5 cut(s)	177, 404, 494, 503, 893
HspAI	GCGC	5 cut(s)	204, 397, 971, 1251, 1341
KasI	GGCGCC	1 cut(s)	396
KpnI	GGTACC	1 cut(s)	1240
Kzo9I	GATC	4 cut(s)	112, 165, 700, 1137
LguI	GCTCTTC	2 cut(s)	1415, 1639
LmnI	GCTCC	5 cut(s)	123, 277, 867, 939, 1659
Lsp1109I	GCAGC	5 cut(s)	44, 77, 400, 985, 988
LweI	GCATC	1 cut(s)	1206
MaeI	CTAG	5 cut(s)	110, 554, 711, 1344, 1449
MaeII	ACGT	6 cut(s)	793, 1027, 1165, 1173, 1326, 1548
MaeIII	GTNAC	6 cut(s)	616, 641, 704, 731, 1053, 1437
MalI	GATC	4 cut(s)	114, 167, 702, 1139
MboI	GATC	4 cut(s)	112, 165, 700, 1137
MhlI	GDGCHC	2 cut(s)	1540, 1634
MluCI	AATT	1 cut(s)	1083
Mly113I	GGCGCC	1 cut(s)	397
MlyI	GAGTC	3 cut(s)	179, 624, 781
MseI	TTAA	3 cut(s)	750, 1218, 1503
MspA1I	CMGCKG	1 cut(s)	57
MspI	CCGG	3 cut(s)	612, 1191, 1519
MspR9I	CCNGG	6 cut(s)	327, 830, 836, 1373, 1400, 1487
MssI	GTTTAAAC	1 cut(s)	751
MvaI	CCWGG	6 cut(s)	327, 830, 836, 1373, 1400, 1487
MvnI	CGCG	2 cut(s)	129, 189
MwoI	GCNNNNNNNGC	7 cut(s)	115, 212, 388, 394, 608, 886, 1458
NarI	GGCGCC	1 cut(s)	397
NcoI	CCATGG	2 cut(s)	400, 490
NdeII	GATC	4 cut(s)	112, 165, 700, 1137
NheI	GCTAGC	1 cut(s)	1448
NlaIII	CATG	5 cut(s)	177, 404, 494, 503, 893
NlaIV	GGNNCC	5 cut(s)	398, 782, 827, 875, 1238
NmuCI	GTSAC	3 cut(s)	616, 641, 1053
NruI	TCGCGA	1 cut(s)	129
NsbI	TGCGCA	1 cut(s)	972
NspV	TTCGAA	2 cut(s)	345, 546
PceI	AGGCCT	1 cut(s)	1159
PciSI	GCTCTTC	2 cut(s)	1415, 1639
PfeI	GAWTC	4 cut(s)	225, 350, 717, 1594
PflFI	GACNNNGTC	1 cut(s)	1550
PkrI	GCNGC	6 cut(s)	59, 67, 390, 975, 978, 1047
PleI	GAGTC	3 cut(s)	178, 623, 780
PluTI	GGCGCC	1 cut(s)	400
PmaCI	CACGTG	1 cut(s)	1166
PmeI	GTTTAAAC	1 cut(s)	751
PmlI	CACGTG	1 cut(s)	1166
PpsI	GAGTC	3 cut(s)	178, 623, 780
Ppu21I	YACGTR	1 cut(s)	1166
PshAI	GACNNNNGTC	1 cut(s)	1526
Psp124BI	GAGCTC	1 cut(s)	1634
Psp6I	CCWGG	6 cut(s)	325, 828, 834, 1371, 1398, 1485
PspCI	CACGTG	1 cut(s)	1166
PspEI	GGTNACC	2 cut(s)	641, 731
PspGI	CCWGG	6 cut(s)	325, 828, 834, 1371, 1398, 1485
PspN4I	GGNNCC	5 cut(s)	398, 782, 827, 875, 1238
PspPI	GGNCC	6 cut(s)	627, 781, 826, 832, 838, 1521
PsyI	GACNNNGTC	1 cut(s)	1550
PvuII	CAGCTG	1 cut(s)	57
RruI	TCGCGA	1 cut(s)	129
RsaI	GTAC	3 cut(s)	1238, 1322, 1469
RsaNI	GTAC	3 cut(s)	1237, 1321, 1468
SacI	GAGCTC	1 cut(s)	1634
SapI	GCTCTTC	2 cut(s)	1415, 1639
SaqAI	TTAA	3 cut(s)	750, 1218, 1503
SatI	GCNGC	6 cut(s)	58, 66, 389, 974, 977, 1046
Sau3AI	GATC	4 cut(s)	112, 165, 700, 1137
Sau96I	GGNCC	6 cut(s)	627, 781, 826, 832, 838, 1521
SchI	GAGTC	3 cut(s)	179, 624, 781
ScrFI	CCNGG	6 cut(s)	327, 830, 836, 1373, 1400, 1487
SduI	GDGCHC	2 cut(s)	1540, 1634
SfaNI	GCATC	1 cut(s)	1206
SfcI	CTRYAG	2 cut(s)	12, 1285
SfoI	GGCGCC	1 cut(s)	398
SfuI	TTCGAA	2 cut(s)	345, 546
SinI	GGWCC	5 cut(s)	627, 826, 832, 838, 1521
SmlI	CTYRAG	1 cut(s)	1112
SmoI	CTYRAG	1 cut(s)	1112
Sse9I	AATT	1 cut(s)	1083
SseBI	AGGCCT	1 cut(s)	1159
SsiI	CCGC	6 cut(s)	142, 158, 187, 1046, 1396, 1534
SspDI	GGCGCC	1 cut(s)	396
SspI	AATATT	1 cut(s)	1150
SspMI	CTAG	5 cut(s)	110, 554, 711, 1344, 1449
SstI	GAGCTC	1 cut(s)	1634
StuI	AGGCCT	1 cut(s)	1159
StyD4I	CCNGG	6 cut(s)	325, 828, 834, 1371, 1398, 1485
StyI	CCWWGG	4 cut(s)	295, 400, 490, 710
TaaI	ACNGT	4 cut(s)	319, 641, 1053, 1621
TaiI	ACGT	6 cut(s)	796, 1030, 1168, 1176, 1329, 1551
TaqI	TCGA	7 cut(s)	168, 345, 546, 574, 775, 957, 1333
TaqII	GACCGA	1 cut(s)	1593
TasI	AATT	1 cut(s)	1083
TatI	WGTACW	2 cut(s)	1320, 1467
TauI	GCSGC	1 cut(s)	1048
TfiI	GAWTC	4 cut(s)	225, 350, 717, 1594
Tru1I	TTAA	3 cut(s)	750, 1218, 1503
Tru9I	TTAA	3 cut(s)	750, 1218, 1503
TscAI	CASTG	3 cut(s)	206, 1301, 1440
TseFI	GTSAC	3 cut(s)	616, 641, 1053
TseI	GCWGC	5 cut(s)	57, 65, 388, 973, 976
Tsp45I	GTSAC	3 cut(s)	616, 641, 1053
TspDTI	ATGAA	2 cut(s)	381, 1402
TspRI	CASTG	3 cut(s)	206, 1301, 1440
Tth111I	GACNNNGTC	1 cut(s)	1550
VpaK11BI	GGWCC	5 cut(s)	627, 826, 832, 838, 1521
XapI	RAATTY	1 cut(s)	1083
XcmI	CCANNNNNNNNNTGG	1 cut(s)	791
XmaJI	CCTAGG	1 cut(s)	710
XspI	CTAG	5 cut(s)	110, 554, 711, 1344, 1449
ZraI	GACGTC	3 cut(s)	1028, 1174, 1549

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.