Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001117.1

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Reverse (-)

54829 .. 56598

Gene Structure 1770 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001117.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ctgaaccagatccaagcccgcgagcccgacaacctcattgagtgcgaagcaggtcggatcgagtcctgggactacaaccaggatgacttccagtgcgctggtgtcgccgttcagagaatcaccattgagagcaacgaccttcacttgccatcttacactaacaccccacgactagtttacgtcgtccaaggttggggtcatgtaggaatggtgctccctggctgtcccgagacttttgaagaatccgagcaatctgatgaggaacaacagggccagcaacaacaatggcaaggccaacgaggccgccagcaacagggacgccgacagggacaacaagagagctttgagcagctagaccgtcaccagagggtccgatgcgtcaaggaaggtgatgtcattgccatccccgccggagtcacctgctggactcacaaccacggtaaccaacctcttgtttttgtcagtctttttgatatgagcaacaagcgcaaccagcttgaccaaaacccaaggaaattctatcttgctggtaacccacaagatgagttcaaccaacaaggccaaagccaatggggacaacaaggacaacaaggctggggacaacaaggacaacaaggccgtggacaacaaggaaggaccaggcgccaacagcagggaaacaacaacaacaacatctttgccggcttcgacacacagctcctcgccgacgctctcaacatcgaccaacagacagcccagcggctccagggacagaacgacaacaggccacagattgttagggttaagggacgtttcgactttgtcgagccaccacgatcacagagggaggaaagacaaatgcaaggacaacaaatgcagggacaacaaggacagtatgaacaaaatggcatggaggagctcttctgtcacatgaagatgaaacagaacattggcaaacctaaaatggccgacgtctacagcccgcaagccggtcacatcagcaccctcaacagcttcagcatgcctattctcaggcgcctccgcctcagtgccgagagaggcttcttctacaacaacgctatctacagcccacactggaacttgaacgcccatgaagtctactacgtcatcaggggcagcgctagggttcaggtggtgaacgacaatggcgagaccatcttggacgaccaggtccgccagggacagctcttcatcgtgccacagaaccacgctgtgttgcaaaaggccatgagcaacggatacgagtacattgccttcaagatcgatgacaatgccatgatgaacaccatggctggcaggacctccgtcctgcgggcactccccgacgtggtcctcgccaacgcctatcagatggaccgtgaccaggcaaggaacctcaagtacaacaggcaggagaccgttgctttgagctcctcaaggtcttcccggtcccagaggaactggtgggctcttgatgcttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

486

Amino Acids

55.84

Weight (kDa)

6.61

Isoelectric Point (pI)

57.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	428
AasI	GACNNNNNNGTC	1 cut(s)	1169
AatII	GACGTC	1 cut(s)	954
Acc36I	ACCTGC	2 cut(s)	41, 428
AccB1I	GGYRCC	2 cut(s)	642, 1014
AccI	GTMKAC	2 cut(s)	954, 1098
AccII	CGCG	1 cut(s)	21
AciI	CCGC	8 cut(s)	19, 304, 408, 739, 962, 1021, 1174, 1312
AclWI	GGATC	2 cut(s)	4, 65
AcoI	YGGCCR	1 cut(s)	945
AcsI	RAATTY	1 cut(s)	515
AcuI	CTGAAG	1 cut(s)	979
AcyI	GRCGYC	4 cut(s)	319, 643, 951, 1015
AdeI	CACNNNGTG	1 cut(s)	1213
AfaI	GTAC	2 cut(s)	1247, 1382
AfeI	AGCGCT	1 cut(s)	1120
AfiI	CCNNNNNNNGG	7 cut(s)	193, 313, 652, 968, 1311, 1327, 1363
AgsI	TTSAA	4 cut(s)	239, 550, 1084, 1258
AhlI	ACTAGT	1 cut(s)	172
AjiI	CACGTC	1 cut(s)	1327
AjnI	CCWGG	8 cut(s)	65, 78, 217, 638, 744, 1167, 1176, 1362
AluBI	AGCT	8 cut(s)	342, 352, 496, 697, 898, 993, 1186, 1410
AluI	AGCT	8 cut(s)	342, 352, 496, 697, 898, 993, 1186, 1410
Alw21I	GWGCWC	3 cut(s)	216, 900, 1412
Alw26I	GTCTC	3 cut(s)	224, 1145, 1388
AlwI	GGATC	2 cut(s)	4, 65
Ama87I	CYCGRG	1 cut(s)	227
Aor51HI	AGCGCT	1 cut(s)	1120
AoxI	GGCC	8 cut(s)	271, 292, 301, 559, 616, 764, 945, 1224
ApeKI	GCWGC	2 cut(s)	349, 1116
ApoI	RAATTY	1 cut(s)	515
ArsI	GACNNNNNNTTYG	2 cut(s)	1387, 1419
AspLEI	GCGC	5 cut(s)	98, 489, 645, 1017, 1121
AspS9I	GGNCC	8 cut(s)	271, 370, 636, 1171, 1299, 1330, 1354, 1428
AsuC2I	CCSGG	1 cut(s)	1426
AsuHPI	GGTGA	5 cut(s)	112, 353, 401, 409, 1147
AvaI	CYCGRG	1 cut(s)	227
AvaII	GGWCC	7 cut(s)	370, 636, 1171, 1299, 1330, 1354, 1428
BaeGI	GKGCMC	1 cut(s)	1318
BanI	GGYRCC	2 cut(s)	642, 1014
BanII	GRGCYC	4 cut(s)	27, 900, 1412, 1450
BarI	GAAGNNNNNNTAC	2 cut(s)	1238, 1270
BbsI	GAAGAC	1 cut(s)	1413
Bbv12I	GWGCWC	3 cut(s)	216, 900, 1412
BbvI	GCAGC	2 cut(s)	361, 1128
BccI	CCATC	4 cut(s)	157, 410, 1163, 1345
BceAI	ACGGC	2 cut(s)	92, 603
BcgI	CGANNNNNNTGC	4 cut(s)	1232, 1253, 1266, 1287
BciT130I	CCWGG	8 cut(s)	67, 80, 219, 640, 746, 1169, 1178, 1364
BciVI	GTATCC	1 cut(s)	1232
BcnI	CCSGG	1 cut(s)	1426
BcoDI	GTCTC	3 cut(s)	224, 1145, 1388
BcuI	ACTAGT	1 cut(s)	172
BfaI	CTAG	3 cut(s)	173, 353, 1122
BfmI	CTRYAG	2 cut(s)	955, 1063
BfoI	RGCGCY	3 cut(s)	646, 1018, 1122
BfuAI	ACCTGC	2 cut(s)	41, 428
BfuI	GTATCC	1 cut(s)	1232
BglI	GCCNNNNNGGC	1 cut(s)	300
BisI	GCNGC	4 cut(s)	304, 350, 740, 1117
BlsI	GCNGC	4 cut(s)	305, 351, 741, 1118
Bme1390I	CCNGG	9 cut(s)	67, 80, 219, 640, 746, 1169, 1178, 1364, 1426
Bme18I	GGWCC	7 cut(s)	370, 636, 1171, 1299, 1330, 1354, 1428
BmeT110I	CYCGRG	1 cut(s)	227
BmgBI	CACGTC	1 cut(s)	1327
BmgT120I	GGNCC	8 cut(s)	271, 370, 636, 1171, 1299, 1330, 1354, 1428
BmiI	GGNNCC	6 cut(s)	371, 644, 743, 1016, 1373, 1430
BmrFI	CCNGG	9 cut(s)	67, 80, 219, 640, 746, 1169, 1178, 1364, 1426
BmsI	GCATC	2 cut(s)	365, 1444
BoxI	GACNNNNGTC	1 cut(s)	1304
BpiI	GAAGAC	1 cut(s)	1413
BpmI	CTGGAG	1 cut(s)	728
BpuEI	CTTGAG	2 cut(s)	1361, 1399
BpuMI	CCSGG	1 cut(s)	1426
Bsa29I	ATCGAT	1 cut(s)	1263
BsaHI	GRCGYC	4 cut(s)	319, 643, 951, 1015
BsaI	GGTCTC	2 cut(s)	1145, 1388
BsaJI	CCNNGG	9 cut(s)	66, 187, 217, 436, 509, 619, 745, 1177, 1287
Bsc4I	CCNNNNNNNGG	7 cut(s)	193, 313, 652, 968, 1311, 1327, 1363
Bse118I	RCCGGY	2 cut(s)	680, 968
Bse1I	ACTGG	3 cut(s)	91, 1079, 1445
Bse3DI	GCAATG	2 cut(s)	396, 1248
BseBI	CCWGG	8 cut(s)	67, 80, 219, 640, 746, 1169, 1178, 1364
BseCI	ATCGAT	1 cut(s)	1263
BseDI	CCNNGG	9 cut(s)	66, 187, 217, 436, 509, 619, 745, 1177, 1287
BseGI	GGATG	2 cut(s)	88, 402
BseLI	CCNNNNNNNGG	7 cut(s)	193, 313, 652, 968, 1311, 1327, 1363
BseMI	GCAATG	2 cut(s)	396, 1248
BseMII	CTCAG	2 cut(s)	1024, 1039
BseNI	ACTGG	3 cut(s)	91, 1079, 1445
BseRI	GAGGAG	3 cut(s)	689, 908, 1402
BseSI	GKGCMC	1 cut(s)	1318
BseXI	GCAGC	2 cut(s)	361, 1128
BseYI	CCCAGC	2 cut(s)	594, 735
Bsh1236I	CGCG	1 cut(s)	21
BshFI	GGCC	8 cut(s)	273, 294, 303, 561, 618, 766, 947, 1226
BshNI	GGYRCC	2 cut(s)	642, 1014
BshVI	ATCGAT	1 cut(s)	1263
BsiHKAI	GWGCWC	3 cut(s)	216, 900, 1412
BsiHKCI	CYCGRG	1 cut(s)	227
BsiSI	CCGG	4 cut(s)	411, 681, 969, 1426
BslI	CCNNNNNNNGG	7 cut(s)	193, 313, 652, 968, 1311, 1327, 1363
BsmAI	GTCTC	3 cut(s)	224, 1145, 1388
BsnI	GGCC	8 cut(s)	273, 294, 303, 561, 618, 766, 947, 1226
Bso31I	GGTCTC	2 cut(s)	1145, 1388
BsoBI	CYCGRG	1 cut(s)	227
Bsp1286I	GDGCHC	6 cut(s)	27, 216, 900, 1318, 1412, 1450
Bsp143I	GATC	4 cut(s)	9, 57, 815, 1260
Bsp19I	CCATGG	1 cut(s)	1287
BspACI	CCGC	8 cut(s)	19, 304, 408, 739, 962, 1021, 1174, 1312
BspANI	GGCC	8 cut(s)	273, 294, 303, 561, 618, 766, 947, 1226
BspCNI	CTCAG	2 cut(s)	1023, 1038
BspDI	ATCGAT	1 cut(s)	1263
BspFNI	CGCG	1 cut(s)	21
BspLI	GGNNCC	6 cut(s)	371, 644, 743, 1016, 1373, 1430
BspMI	ACCTGC	2 cut(s)	41, 428
BspPI	GGATC	2 cut(s)	4, 65
BspQI	GCTCTTC	2 cut(s)	905, 1193
BspT107I	GGYRCC	2 cut(s)	642, 1014
BspTNI	GGTCTC	2 cut(s)	1145, 1388
BsrDI	GCAATG	2 cut(s)	396, 1248
BsrFI	RCCGGY	2 cut(s)	680, 968
BsrI	ACTGG	3 cut(s)	91, 1079, 1445
BssAI	RCCGGY	2 cut(s)	680, 968
BssECI	CCNNGG	9 cut(s)	66, 187, 217, 436, 509, 619, 745, 1177, 1287
BssMI	GATC	4 cut(s)	9, 57, 815, 1260
BssNI	GRCGYC	4 cut(s)	319, 643, 951, 1015
BssT1I	CCWWGG	3 cut(s)	187, 509, 1287
Bst2UI	CCWGG	8 cut(s)	67, 80, 219, 640, 746, 1169, 1178, 1364
Bst4CI	ACNGT	5 cut(s)	359, 440, 873, 1358, 1399
Bst6I	CTCTTC	2 cut(s)	905, 1193
BstACI	GRCGYC	4 cut(s)	319, 643, 951, 1015
BstDEI	CTNAG	2 cut(s)	1010, 1025
BstDSI	CCRYGG	3 cut(s)	436, 619, 1287
BstEII	GGTNACC	2 cut(s)	440, 530
BstF5I	GGATG	2 cut(s)	88, 402
BstFNI	CGCG	1 cut(s)	21
BstH2I	RGCGCY	3 cut(s)	646, 1018, 1122
BstHHI	GCGC	5 cut(s)	98, 489, 645, 1017, 1121
BstKTI	GATC	4 cut(s)	12, 60, 818, 1263
BstMAI	GTCTC	3 cut(s)	224, 1145, 1388
BstMBI	GATC	4 cut(s)	9, 57, 815, 1260
BstMWI	GCNNNNNNNGC	7 cut(s)	104, 300, 407, 486, 493, 649, 1454
BstNI	CCWGG	8 cut(s)	67, 80, 219, 640, 746, 1169, 1178, 1364
BstNSI	RCATGY	1 cut(s)	1003
BstPAI	GACNNNNGTC	1 cut(s)	1304
BstPI	GGTNACC	2 cut(s)	440, 530
BstSCI	CCNGG	9 cut(s)	65, 78, 217, 638, 744, 1167, 1176, 1362, 1424
BstSFI	CTRYAG	2 cut(s)	955, 1063
BstSLI	GKGCMC	1 cut(s)	1318
BstUI	CGCG	1 cut(s)	21
BstV1I	GCAGC	2 cut(s)	361, 1128
BstV2I	GAAGAC	1 cut(s)	1413
BstX2I	RGATCY	1 cut(s)	9
BstXI	CCANNNNNNTGG	1 cut(s)	98
BstYI	RGATCY	1 cut(s)	9
Bsu15I	ATCGAT	1 cut(s)	1263
BsuI	GTATCC	1 cut(s)	1232
BsuRI	GGCC	8 cut(s)	273, 294, 303, 561, 618, 766, 947, 1226
BsuTUI	ATCGAT	1 cut(s)	1263
BtgI	CCRYGG	3 cut(s)	436, 619, 1287
BtrI	CACGTC	1 cut(s)	1327
BtsCI	GGATG	2 cut(s)	88, 402
BtsIMutI	CAGTG	3 cut(s)	98, 1033, 1072
BveI	ACCTGC	2 cut(s)	41, 428
CfoI	GCGC	5 cut(s)	98, 489, 645, 1017, 1121
Cfr10I	RCCGGY	2 cut(s)	680, 968
Cfr13I	GGNCC	8 cut(s)	271, 370, 636, 1171, 1299, 1330, 1354, 1428
ClaI	ATCGAT	1 cut(s)	1263
CseI	GACGC	3 cut(s)	327, 367, 716
CsiI	ACCWGGT	1 cut(s)	1167
Csp6I	GTAC	2 cut(s)	1246, 1381
CviAII	CATG	8 cut(s)	200, 889, 910, 1000, 1091, 1228, 1276, 1288
CviQI	GTAC	2 cut(s)	1246, 1381
DdeI	CTNAG	2 cut(s)	1010, 1025
DinI	GGCGCC	2 cut(s)	644, 1016
DpnI	GATC	4 cut(s)	11, 59, 817, 1262
DpnII	GATC	4 cut(s)	9, 57, 815, 1260
DraIII	CACNNNGTG	1 cut(s)	1213
DrdI	GACNNNNNNGTC	1 cut(s)	1169
DseDI	GACNNNNNNGTC	1 cut(s)	1169
EaeI	YGGCCR	1 cut(s)	945
Eam1104I	CTCTTC	2 cut(s)	905, 1193
EarI	CTCTTC	2 cut(s)	905, 1193
EciI	GGCGGA	2 cut(s)	1010, 1163
Ecl136II	GAGCTC	2 cut(s)	898, 1410
Eco130I	CCWWGG	3 cut(s)	187, 509, 1287
Eco24I	GRGCYC	4 cut(s)	27, 900, 1412, 1450
Eco31I	GGTCTC	2 cut(s)	1145, 1388
Eco47I	GGWCC	7 cut(s)	370, 636, 1171, 1299, 1330, 1354, 1428
Eco47III	AGCGCT	1 cut(s)	1120
Eco53kI	GAGCTC	2 cut(s)	898, 1410
Eco57I	CTGAAG	1 cut(s)	979
Eco88I	CYCGRG	1 cut(s)	227
Eco91I	GGTNACC	2 cut(s)	440, 530
EcoICRI	GAGCTC	2 cut(s)	898, 1410
EcoO109I	RGGNCCY	1 cut(s)	1299
EcoO65I	GGTNACC	2 cut(s)	440, 530
EcoRII	CCWGG	8 cut(s)	65, 78, 217, 638, 744, 1167, 1176, 1362
EcoT14I	CCWWGG	3 cut(s)	187, 509, 1287
EcoT38I	GRGCYC	4 cut(s)	27, 900, 1412, 1450
EgeI	GGCGCC	2 cut(s)	644, 1016
EheI	GGCGCC	2 cut(s)	644, 1016
ErhI	CCWWGG	3 cut(s)	187, 509, 1287
FaeI	CATG	8 cut(s)	203, 892, 913, 1003, 1094, 1231, 1279, 1291
FatI	CATG	8 cut(s)	199, 888, 909, 999, 1090, 1227, 1275, 1287
FauI	CCCGC	4 cut(s)	26, 415, 969, 1305
FblI	GTMKAC	2 cut(s)	954, 1098
Fnu4HI	GCNGC	4 cut(s)	304, 350, 740, 1117
FokI	GGATG	2 cut(s)	95, 389
FriOI	GRGCYC	4 cut(s)	27, 900, 1412, 1450
Fsp4HI	GCNGC	4 cut(s)	304, 350, 740, 1117
FspBI	CTAG	3 cut(s)	173, 353, 1122
GlaI	GCGC	5 cut(s)	97, 488, 644, 1016, 1120
GluI	GCNGC	4 cut(s)	304, 350, 740, 1117
GsaI	CCCAGC	2 cut(s)	598, 739
GsuI	CTGGAG	1 cut(s)	728
HaeII	RGCGCY	3 cut(s)	646, 1018, 1122
HaeIII	GGCC	8 cut(s)	273, 294, 303, 561, 618, 766, 947, 1226
HapII	CCGG	4 cut(s)	411, 681, 969, 1426
HgaI	GACGC	3 cut(s)	327, 367, 716
HhaI	GCGC	5 cut(s)	98, 489, 645, 1017, 1121
Hin1I	GRCGYC	4 cut(s)	319, 643, 951, 1015
Hin1II	CATG	8 cut(s)	203, 892, 913, 1003, 1094, 1231, 1279, 1291
Hin6I	GCGC	5 cut(s)	96, 487, 643, 1015, 1119
HinP1I	GCGC	5 cut(s)	96, 487, 643, 1015, 1119
HinfI	GANTC	5 cut(s)	62, 117, 242, 414, 427
HpaII	CCGG	4 cut(s)	411, 681, 969, 1426
HphI	GGTGA	5 cut(s)	112, 353, 401, 409, 1147
Hpy166II	GTNNAC	5 cut(s)	178, 623, 955, 1099, 1138
Hpy188I	TCNGA	6 cut(s)	57, 114, 247, 256, 374, 1350
Hpy188III	TCNNGA	3 cut(s)	227, 1258, 1451
Hpy8I	GTNNAC	5 cut(s)	178, 623, 955, 1099, 1138
Hpy99I	CGWCG	4 cut(s)	185, 710, 953, 1328
HpyAV	CCTTC	4 cut(s)	149, 380, 627, 1264
HpyCH4III	ACNGT	5 cut(s)	359, 440, 873, 1358, 1399
HpyCH4IV	ACGT	5 cut(s)	180, 790, 951, 1104, 1326
HpyCH4V	TGCA	3 cut(s)	841, 856, 1219
HpyF10VI	GCNNNNNNNGC	7 cut(s)	104, 300, 407, 486, 493, 649, 1454
HpyF3I	CTNAG	2 cut(s)	1010, 1025
HpySE526I	ACGT	5 cut(s)	180, 790, 951, 1104, 1326
Hsp92I	GRCGYC	4 cut(s)	319, 643, 951, 1015
Hsp92II	CATG	8 cut(s)	203, 892, 913, 1003, 1094, 1231, 1279, 1291
HspAI	GCGC	5 cut(s)	96, 487, 643, 1015, 1119
KasI	GGCGCC	2 cut(s)	642, 1014
KroI	GCCGGC	1 cut(s)	680
KroNI	GCCGGC	1 cut(s)	682
Kzo9I	GATC	4 cut(s)	9, 57, 815, 1260
LguI	GCTCTTC	2 cut(s)	905, 1193
LmnI	GCTCC	5 cut(s)	219, 702, 747, 895, 1415
Lsp1109I	GCAGC	2 cut(s)	361, 1128
LweI	GCATC	2 cut(s)	365, 1444
MabI	ACCWGGT	1 cut(s)	1167
MaeI	CTAG	3 cut(s)	173, 353, 1122
MaeII	ACGT	5 cut(s)	180, 790, 951, 1104, 1326
MaeIII	GTNAC	7 cut(s)	359, 415, 440, 530, 905, 971, 1358
MalI	GATC	4 cut(s)	11, 59, 817, 1262
MboI	GATC	4 cut(s)	9, 57, 815, 1260
MboII	GAAGA	6 cut(s)	251, 892, 925, 1036, 1180, 1413
MflI	RGATCY	1 cut(s)	9
MhlI	GDGCHC	6 cut(s)	27, 216, 900, 1318, 1412, 1450
MluCI	AATT	1 cut(s)	515
Mly113I	GGCGCC	2 cut(s)	643, 1015
MlyI	GAGTC	3 cut(s)	71, 421, 423
MmeI	TCCRAC	1 cut(s)	35
MroNI	GCCGGC	1 cut(s)	680
MseI	TTAA	2 cut(s)	783, 1459
MslI	CAYNNNNRTG	1 cut(s)	914
MspA1I	CMGCKG	1 cut(s)	739
MspI	CCGG	4 cut(s)	411, 681, 969, 1426
MspR9I	CCNGG	9 cut(s)	67, 80, 219, 640, 746, 1169, 1178, 1364, 1426
MvaI	CCWGG	8 cut(s)	67, 80, 219, 640, 746, 1169, 1178, 1364
MvnI	CGCG	1 cut(s)	21
MwoI	GCNNNNNNNGC	7 cut(s)	104, 300, 407, 486, 493, 649, 1454
NaeI	GCCGGC	1 cut(s)	682
NarI	GGCGCC	2 cut(s)	643, 1015
NciI	CCSGG	1 cut(s)	1426
NcoI	CCATGG	1 cut(s)	1287
NdeII	GATC	4 cut(s)	9, 57, 815, 1260
NgoMIV	GCCGGC	1 cut(s)	680
NlaIII	CATG	8 cut(s)	203, 892, 913, 1003, 1094, 1231, 1279, 1291
NlaIV	GGNNCC	6 cut(s)	371, 644, 743, 1016, 1373, 1430
NmeAIII	GCCGAG	1 cut(s)	1057
NmuCI	GTSAC	5 cut(s)	359, 415, 905, 971, 1358
NspI	RCATGY	1 cut(s)	1003
PaeI	GCATGC	1 cut(s)	1003
PaqCI	CACCTGC	1 cut(s)	428
PciSI	GCTCTTC	2 cut(s)	905, 1193
PcsI	WCGNNNNNNNCGW	2 cut(s)	801, 1146
PdiI	GCCGGC	1 cut(s)	682
PfeI	GAWTC	2 cut(s)	117, 242
PflFI	GACNNNGTC	3 cut(s)	800, 1169, 1328
PkrI	GCNGC	4 cut(s)	305, 351, 741, 1118
PleI	GAGTC	3 cut(s)	70, 421, 422
PluTI	GGCGCC	2 cut(s)	646, 1018
PpsI	GAGTC	3 cut(s)	70, 421, 422
PpuMI	RGGWCCY	1 cut(s)	1299
PshAI	GACNNNNGTC	1 cut(s)	1304
Psp124BI	GAGCTC	2 cut(s)	900, 1412
Psp5II	RGGWCCY	1 cut(s)	1299
Psp6I	CCWGG	8 cut(s)	65, 78, 217, 638, 744, 1167, 1176, 1362
PspEI	GGTNACC	2 cut(s)	440, 530
PspFI	CCCAGC	2 cut(s)	594, 735
PspGI	CCWGG	8 cut(s)	65, 78, 217, 638, 744, 1167, 1176, 1362
PspN4I	GGNNCC	6 cut(s)	371, 644, 743, 1016, 1373, 1430
PspPI	GGNCC	8 cut(s)	271, 370, 636, 1171, 1299, 1330, 1354, 1428
PspPPI	RGGWCCY	1 cut(s)	1299
PsrI	GAACNNNNNNTAC	2 cut(s)	1364, 1396
PsuI	RGATCY	1 cut(s)	9
PsyI	GACNNNGTC	3 cut(s)	800, 1169, 1328
RsaI	GTAC	2 cut(s)	1247, 1382
RsaNI	GTAC	2 cut(s)	1246, 1381
RseI	CAYNNNNRTG	1 cut(s)	914
SacI	GAGCTC	2 cut(s)	900, 1412
SapI	GCTCTTC	2 cut(s)	905, 1193
SaqAI	TTAA	2 cut(s)	783, 1459
SatI	GCNGC	4 cut(s)	304, 350, 740, 1117
Sau3AI	GATC	4 cut(s)	9, 57, 815, 1260
Sau96I	GGNCC	8 cut(s)	271, 370, 636, 1171, 1299, 1330, 1354, 1428
SchI	GAGTC	3 cut(s)	71, 421, 423
ScrFI	CCNGG	9 cut(s)	67, 80, 219, 640, 746, 1169, 1178, 1364, 1426
SduI	GDGCHC	6 cut(s)	27, 216, 900, 1318, 1412, 1450
SexAI	ACCWGGT	1 cut(s)	1167
SfaNI	GCATC	2 cut(s)	365, 1444
SfcI	CTRYAG	2 cut(s)	955, 1063
SfiI	GGCCNNNNNGGCC	1 cut(s)	300
SfoI	GGCGCC	2 cut(s)	644, 1016
SinI	GGWCC	7 cut(s)	370, 636, 1171, 1299, 1330, 1354, 1428
SmiMI	CAYNNNNRTG	1 cut(s)	914
SmlI	CTYRAG	2 cut(s)	1376, 1414
SmoI	CTYRAG	2 cut(s)	1376, 1414
SpeI	ACTAGT	1 cut(s)	172
SphI	GCATGC	1 cut(s)	1003
Sse9I	AATT	1 cut(s)	515
SsiI	CCGC	8 cut(s)	19, 304, 408, 739, 962, 1021, 1174, 1312
SspDI	GGCGCC	2 cut(s)	642, 1014
SspMI	CTAG	3 cut(s)	173, 353, 1122
SstI	GAGCTC	2 cut(s)	900, 1412
StyD4I	CCNGG	9 cut(s)	65, 78, 217, 638, 744, 1167, 1176, 1362, 1424
StyI	CCWWGG	3 cut(s)	187, 509, 1287
TaaI	ACNGT	5 cut(s)	359, 440, 873, 1358, 1399
TaiI	ACGT	5 cut(s)	183, 793, 954, 1107, 1329
TaqI	TCGA	6 cut(s)	60, 687, 720, 795, 804, 1263
TasI	AATT	1 cut(s)	515
TatI	WGTACW	2 cut(s)	1245, 1380
TauI	GCSGC	2 cut(s)	306, 742
TfiI	GAWTC	2 cut(s)	117, 242
Tru1I	TTAA	2 cut(s)	783, 1459
Tru9I	TTAA	2 cut(s)	783, 1459
TscAI	CASTG	3 cut(s)	98, 1033, 1079
TseFI	GTSAC	5 cut(s)	359, 415, 905, 971, 1358
TseI	GCWGC	2 cut(s)	349, 1116
Tsp45I	GTSAC	5 cut(s)	359, 415, 905, 971, 1358
TspDTI	ATGAA	6 cut(s)	891, 926, 932, 1107, 1180, 1295
TspGWI	ACGGA	2 cut(s)	1251, 1294
TspRI	CASTG	3 cut(s)	98, 1033, 1079
Tth111I	GACNNNGTC	3 cut(s)	800, 1169, 1328
VpaK11BI	GGWCC	7 cut(s)	370, 636, 1171, 1299, 1330, 1354, 1428
XapI	RAATTY	1 cut(s)	515
XceI	RCATGY	1 cut(s)	1003
XmiI	GTMKAC	2 cut(s)	954, 1098
XspI	CTAG	3 cut(s)	173, 353, 1122
ZraI	GACGTC	1 cut(s)	952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.