Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Forward (+)

51296181 .. 51298148

Gene Structure 1968 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ25840

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1641 bp

ATGAGATTCCTTACACATCATTCGTGCTTCTCTCTCCCTTACATCCTCTACTCTCCTATAAATACTAACAGTCTACTCGCCGCTTCACCGCAACCCACAACTAGCTATCTGCCACTGATCATCACTATGGCCAAGCATTTAGCTCTCGTTTTCTCTCTCTGCTTTATTGTTCTCTTCCACGGCTGCTTAGCCAGTCGCCAACAATCTCAGTTCAGCCAGCAAAATGAGTGCCAGCTGAACCAGATCCAAGCCCGCGAGCCCGACAACCGCATTGAGTGCGAAGCAGGTCGGATCGAGTCCTGGGACTACAACCAGGATGACTTCCAGTGCGCTGGTGTCGCCGTTCAGAGAATCACCATTGAGAGCAACGGCCTTCACTTGCCATCTTACACTAACACCCCACGACTAGTTTACGTCGTCCAAGGAATGGTGCTCCCTGGCTGTCCCGAGACTTTTGAAGAATCGGAGCAATCTGATGAGGAACAACAGGGCCAGGAACAACAAGGGCAAGGCCAACGAGGCCGCCAGCAACAGGGACGCCGACAGGGACAACAAGAGAGCTTTGAGCAGCTAGACCGTCACCAGAGGGTCCGACGCGTCAAGGAAGGTGATGTCATTGCCGTCCCCGCTGGAGTCACCTGCTGGACTCACAACCACGGTAACCAACCTCTTGTTTTTGTCAGTCTTTTTGATATGAGCAACAAGCGCAACCAGCTTGACCAAAACCCAAGGAAATTCTATCTTGCTGGTAACCCACAAGATGAGTTCAACCAACAAGGCCAAAGCCAATGGGGACAACAAGGACAACAAGGCCGTGGACAACAAGGAAGGACCAGGCGCCAACAGCAGGGAAACAACAACAACAACATCTTTGCCGGCTTCGACACACAGCTCCTCGCCGACGCTCTCAACATCGACCAACAGACCGCCCAGCGGCTCCAGGGACAGAACGACAACAGGCCACAGATTGTTAGGGTTCAGGGACGTTTCGACTTTGTCGAGCCACCACGATCACAGAGGGAGGAAAGACAAATGCAGGGACAAAAAGGACAGTATGAACAGAATGGCATGGAGGAGCTCTTCTGTCACATGAAGATGAAACAGAACATTGGCAAACCTAAAATGGCCGACGTCTACAGCCCGCAAGCCGGTCGCATCAGCACCCTCAACAGCTTCAGCATGCCTATTCTCAGGCGCCTCCGCCTCAGTGCCGAGAGAGGCTTCTTCTACAACAACGCTATCTACAGCCCACACTGGAACTTGAACGCCCATGAAGTCTACTACGTCATCAGGGGCAGCGCTAGGGTTCAGGTGGTGAACGACAATGGCGAGACCATCTTGGACGACCAGGTCCGGCAGGGACAGCTCTTCATCGTGCCACAGAACCACGCCGTGTTGCAAAAGGCCATGAGCAACGGATACGAGTACATTGCCTTCAAGACCGATGACAATGCCATGATGAACACCATGGCTGGCAGGACCTCCGTCCTGCGGGCACTCCCCGACGTGGTCCTCGCCAACGCCTACCAGATGGACCGTGAGCAGGCAAGGAACCTCAAGTACAACAGGCAGGAGACCGTTGCTTTGAGCTCCTCAAGGTCTTCCCGGTCCCAGAGGAACTGGTGGCCTCTTGATGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

546

Amino Acids

62.6

Weight (kDa)

8.31

Isoelectric Point (pI)

59.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	83 - 252	1.1e-21	Cupin
Cupin_1	PF00190	369 - 516	2.1e-38	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	647
AasI	GACNNNNNNGTC	1 cut(s)	1349
AatII	GACGTC	1 cut(s)	1134
Acc36I	ACCTGC	2 cut(s)	275, 647
AccB1I	GGYRCC	2 cut(s)	837, 1194
AccB7I	CCANNNNNTGG	1 cut(s)	427
AccI	GTMKAC	3 cut(s)	73, 1134, 1278
AccII	CGCG	2 cut(s)	255, 597
AclWI	GGATC	2 cut(s)	238, 299
AcoI	YGGCCR	2 cut(s)	129, 1125
AcsI	RAATTY	1 cut(s)	734
AcuI	CTGAAG	1 cut(s)	1159
AcyI	GRCGYC	4 cut(s)	538, 838, 1131, 1195
AdeI	CACNNNGTG	1 cut(s)	1393
AfaI	GTAC	2 cut(s)	1427, 1562
AfeI	AGCGCT	1 cut(s)	1300
AfiI	CCNNNNNNNGG	8 cut(s)	427, 532, 847, 933, 1148, 1491, 1507, 1543
AflIII	ACRYGT	1 cut(s)	595
AgsI	TTSAA	4 cut(s)	458, 769, 1264, 1438
AhlI	ACTAGT	1 cut(s)	406
AjiI	CACGTC	1 cut(s)	1507
AjnI	CCWGG	7 cut(s)	299, 312, 436, 492, 833, 939, 1347
Alw21I	GWGCWC	3 cut(s)	435, 1080, 1592
Alw26I	GTCTC	3 cut(s)	443, 1325, 1568
AlwI	GGATC	2 cut(s)	238, 299
Ama87I	CYCGRG	1 cut(s)	446
Aor51HI	AGCGCT	1 cut(s)	1300
ApeKI	GCWGC	3 cut(s)	183, 568, 1296
ApoI	RAATTY	1 cut(s)	734
ArsI	GACNNNNNNTTYG	2 cut(s)	1567, 1599
AspLEI	GCGC	5 cut(s)	332, 708, 840, 1197, 1301
AspS9I	GGNCC	8 cut(s)	490, 589, 831, 1351, 1479, 1510, 1534, 1608
AsuC2I	CCSGG	1 cut(s)	1606
AsuHPI	GGTGA	6 cut(s)	78, 346, 572, 620, 628, 1327
AvaI	CYCGRG	1 cut(s)	446
AvaII	GGWCC	7 cut(s)	589, 831, 1351, 1479, 1510, 1534, 1608
BaeGI	GKGCMC	1 cut(s)	1498
BalI	TGGCCA	1 cut(s)	131
BanI	GGYRCC	2 cut(s)	837, 1194
BanII	GRGCYC	3 cut(s)	261, 1080, 1592
BarI	GAAGNNNNNNTAC	2 cut(s)	1418, 1450
BbsI	GAAGAC	1 cut(s)	1593
Bbv12I	GWGCWC	3 cut(s)	435, 1080, 1592
BbvI	GCAGC	3 cut(s)	170, 580, 1308
BccI	CCATC	3 cut(s)	391, 1343, 1525
BceAI	ACGGC	6 cut(s)	196, 326, 385, 605, 798, 1376
BcgI	CGANNNNNNTGC	6 cut(s)	1133, 1167, 1412, 1433, 1446, 1467
BciT130I	CCWGG	7 cut(s)	301, 314, 438, 494, 835, 941, 1349
BciVI	GTATCC	1 cut(s)	1412
BclI	TGATCA	1 cut(s)	117
BcnI	CCSGG	1 cut(s)	1606
BcoDI	GTCTC	3 cut(s)	443, 1325, 1568
BcuI	ACTAGT	1 cut(s)	406
BfaI	CTAG	4 cut(s)	102, 407, 572, 1302
BfmI	CTRYAG	2 cut(s)	1135, 1243
BfoI	RGCGCY	3 cut(s)	841, 1198, 1302
BfuAI	ACCTGC	2 cut(s)	275, 647
BfuI	GTATCC	1 cut(s)	1412
BglI	GCCNNNNNGGC	1 cut(s)	519
BisI	GCNGC	6 cut(s)	81, 184, 523, 569, 935, 1297
BlpI	GCTNAGC	1 cut(s)	187
BlsI	GCNGC	6 cut(s)	82, 185, 524, 570, 936, 1298
Bme1390I	CCNGG	8 cut(s)	301, 314, 438, 494, 835, 941, 1349, 1606
Bme18I	GGWCC	7 cut(s)	589, 831, 1351, 1479, 1510, 1534, 1608
BmeT110I	CYCGRG	1 cut(s)	446
BmgBI	CACGTC	1 cut(s)	1507
BmgT120I	GGNCC	8 cut(s)	490, 589, 831, 1351, 1479, 1510, 1534, 1608
BmiI	GGNNCC	6 cut(s)	590, 839, 938, 1196, 1553, 1610
BmrFI	CCNGG	8 cut(s)	301, 314, 438, 494, 835, 941, 1349, 1606
BmsI	GCATC	2 cut(s)	1164, 1624
BoxI	GACNNNNGTC	1 cut(s)	1484
BpiI	GAAGAC	1 cut(s)	1593
BpmI	CTGGAG	2 cut(s)	651, 923
Bpu1102I	GCTNAGC	1 cut(s)	187
BpuEI	CTTGAG	2 cut(s)	1541, 1579
BpuMI	CCSGG	1 cut(s)	1606
BsaHI	GRCGYC	4 cut(s)	538, 838, 1131, 1195
BsaI	GGTCTC	2 cut(s)	1325, 1568
BsaJI	CCNNGG	9 cut(s)	178, 300, 421, 436, 655, 728, 814, 940, 1467
Bsc4I	CCNNNNNNNGG	8 cut(s)	427, 532, 847, 933, 1148, 1491, 1507, 1543
Bse118I	RCCGGY	2 cut(s)	875, 1148
Bse1I	ACTGG	4 cut(s)	192, 325, 1259, 1625
Bse3DI	GCAATG	2 cut(s)	615, 1428
BseBI	CCWGG	7 cut(s)	301, 314, 438, 494, 835, 941, 1349
BseDI	CCNNGG	9 cut(s)	178, 300, 421, 436, 655, 728, 814, 940, 1467
BseGI	GGATG	2 cut(s)	42, 322
BseLI	CCNNNNNNNGG	8 cut(s)	427, 532, 847, 933, 1148, 1491, 1507, 1543
BseMI	GCAATG	2 cut(s)	615, 1428
BseMII	CTCAG	3 cut(s)	221, 1204, 1219
BseNI	ACTGG	4 cut(s)	192, 325, 1259, 1625
BseRI	GAGGAG	3 cut(s)	884, 1088, 1582
BseSI	GKGCMC	1 cut(s)	1498
BseXI	GCAGC	3 cut(s)	170, 580, 1308
BseYI	CCCAGC	1 cut(s)	930
Bsh1236I	CGCG	2 cut(s)	255, 597
Bsh1285I	CGRYCG	1 cut(s)	1153
BshNI	GGYRCC	2 cut(s)	837, 1194
BsiEI	CGRYCG	1 cut(s)	1153
BsiHKAI	GWGCWC	3 cut(s)	435, 1080, 1592
BsiHKCI	CYCGRG	1 cut(s)	446
BsiSI	CCGG	4 cut(s)	876, 1149, 1354, 1606
BslI	CCNNNNNNNGG	8 cut(s)	427, 532, 847, 933, 1148, 1491, 1507, 1543
BsmAI	GTCTC	3 cut(s)	443, 1325, 1568
Bso31I	GGTCTC	2 cut(s)	1325, 1568
BsoBI	CYCGRG	1 cut(s)	446
Bsp1286I	GDGCHC	5 cut(s)	261, 435, 1080, 1498, 1592
Bsp143I	GATC	4 cut(s)	117, 243, 291, 1010
Bsp1720I	GCTNAGC	1 cut(s)	187
Bsp19I	CCATGG	1 cut(s)	1467
BspCNI	CTCAG	3 cut(s)	220, 1203, 1218
BspFNI	CGCG	2 cut(s)	255, 597
BspLI	GGNNCC	6 cut(s)	590, 839, 938, 1196, 1553, 1610
BspMI	ACCTGC	2 cut(s)	275, 647
BspPI	GGATC	2 cut(s)	238, 299
BspQI	GCTCTTC	2 cut(s)	1085, 1373
BspT107I	GGYRCC	2 cut(s)	837, 1194
BspTNI	GGTCTC	2 cut(s)	1325, 1568
BsrDI	GCAATG	2 cut(s)	615, 1428
BsrFI	RCCGGY	2 cut(s)	875, 1148
BsrI	ACTGG	4 cut(s)	192, 325, 1259, 1625
BssAI	RCCGGY	2 cut(s)	875, 1148
BssECI	CCNNGG	9 cut(s)	178, 300, 421, 436, 655, 728, 814, 940, 1467
BssMI	GATC	4 cut(s)	117, 243, 291, 1010
BssNI	GRCGYC	4 cut(s)	538, 838, 1131, 1195
BssT1I	CCWWGG	3 cut(s)	421, 728, 1467
Bst2UI	CCWGG	7 cut(s)	301, 314, 438, 494, 835, 941, 1349
Bst4CI	ACNGT	6 cut(s)	71, 578, 659, 1053, 1538, 1579
Bst6I	CTCTTC	3 cut(s)	179, 1085, 1373
BstACI	GRCGYC	4 cut(s)	538, 838, 1131, 1195
BstAPI	GCANNNNNTGC	1 cut(s)	276
BstDEI	CTNAG	4 cut(s)	187, 207, 1190, 1205
BstDSI	CCRYGG	4 cut(s)	178, 655, 814, 1467
BstEII	GGTNACC	2 cut(s)	659, 749
BstF5I	GGATG	2 cut(s)	42, 322
BstFNI	CGCG	2 cut(s)	255, 597
BstH2I	RGCGCY	3 cut(s)	841, 1198, 1302
BstHHI	GCGC	5 cut(s)	332, 708, 840, 1197, 1301
BstKTI	GATC	4 cut(s)	120, 246, 294, 1013
BstMAI	GTCTC	3 cut(s)	443, 1325, 1568
BstMBI	GATC	4 cut(s)	117, 243, 291, 1010
BstMCI	CGRYCG	1 cut(s)	1153
BstMWI	GCNNNNNNNGC	8 cut(s)	276, 338, 519, 626, 705, 712, 844, 1363
BstNI	CCWGG	7 cut(s)	301, 314, 438, 494, 835, 941, 1349
BstNSI	RCATGY	1 cut(s)	1183
BstPAI	GACNNNNGTC	1 cut(s)	1484
BstPI	GGTNACC	2 cut(s)	659, 749
BstSCI	CCNGG	8 cut(s)	299, 312, 436, 492, 833, 939, 1347, 1604
BstSFI	CTRYAG	2 cut(s)	1135, 1243
BstSLI	GKGCMC	1 cut(s)	1498
BstUI	CGCG	2 cut(s)	255, 597
BstV1I	GCAGC	3 cut(s)	170, 580, 1308
BstV2I	GAAGAC	1 cut(s)	1593
BstX2I	RGATCY	1 cut(s)	243
BstXI	CCANNNNNNTGG	1 cut(s)	332
BstYI	RGATCY	1 cut(s)	243
BsuI	GTATCC	1 cut(s)	1412
BtgI	CCRYGG	4 cut(s)	178, 655, 814, 1467
BtrI	CACGTC	1 cut(s)	1507
BtsCI	GGATG	2 cut(s)	42, 322
BtsIMutI	CAGTG	4 cut(s)	113, 332, 1213, 1252
BveI	ACCTGC	2 cut(s)	275, 647
CfoI	GCGC	5 cut(s)	332, 708, 840, 1197, 1301
Cfr10I	RCCGGY	2 cut(s)	875, 1148
Cfr13I	GGNCC	8 cut(s)	490, 589, 831, 1351, 1479, 1510, 1534, 1608
CseI	GACGC	4 cut(s)	546, 586, 603, 911
CsiI	ACCWGGT	1 cut(s)	1347
Csp6I	GTAC	2 cut(s)	1426, 1561
CviAII	CATG	7 cut(s)	1069, 1090, 1180, 1271, 1408, 1456, 1468
CviQI	GTAC	2 cut(s)	1426, 1561
DdeI	CTNAG	4 cut(s)	187, 207, 1190, 1205
DinI	GGCGCC	2 cut(s)	839, 1196
DpnI	GATC	4 cut(s)	119, 245, 293, 1012
DpnII	GATC	4 cut(s)	117, 243, 291, 1010
DraIII	CACNNNGTG	1 cut(s)	1393
DrdI	GACNNNNNNGTC	1 cut(s)	1349
DseDI	GACNNNNNNGTC	1 cut(s)	1349
EaeI	YGGCCR	2 cut(s)	129, 1125
Eam1104I	CTCTTC	3 cut(s)	179, 1085, 1373
EarI	CTCTTC	3 cut(s)	179, 1085, 1373
EciI	GGCGGA	1 cut(s)	1190
Ecl136II	GAGCTC	2 cut(s)	1078, 1590
Eco130I	CCWWGG	3 cut(s)	421, 728, 1467
Eco24I	GRGCYC	3 cut(s)	261, 1080, 1592
Eco31I	GGTCTC	2 cut(s)	1325, 1568
Eco47I	GGWCC	7 cut(s)	589, 831, 1351, 1479, 1510, 1534, 1608
Eco47III	AGCGCT	1 cut(s)	1300
Eco53kI	GAGCTC	2 cut(s)	1078, 1590
Eco57I	CTGAAG	1 cut(s)	1159
Eco88I	CYCGRG	1 cut(s)	446
Eco91I	GGTNACC	2 cut(s)	659, 749
EcoICRI	GAGCTC	2 cut(s)	1078, 1590
EcoO109I	RGGNCCY	1 cut(s)	1479
EcoO65I	GGTNACC	2 cut(s)	659, 749
EcoRII	CCWGG	7 cut(s)	299, 312, 436, 492, 833, 939, 1347
EcoT14I	CCWWGG	3 cut(s)	421, 728, 1467
EcoT38I	GRGCYC	3 cut(s)	261, 1080, 1592
EgeI	GGCGCC	2 cut(s)	839, 1196
EheI	GGCGCC	2 cut(s)	839, 1196
ErhI	CCWWGG	3 cut(s)	421, 728, 1467
FaeI	CATG	7 cut(s)	1072, 1093, 1183, 1274, 1411, 1459, 1471
FatI	CATG	7 cut(s)	1068, 1089, 1179, 1270, 1407, 1455, 1467
FauI	CCCGC	4 cut(s)	260, 634, 1149, 1485
FbaI	TGATCA	1 cut(s)	117
FblI	GTMKAC	3 cut(s)	73, 1134, 1278
Fnu4HI	GCNGC	6 cut(s)	81, 184, 523, 569, 935, 1297
FokI	GGATG	2 cut(s)	29, 329
FriOI	GRGCYC	3 cut(s)	261, 1080, 1592
Fsp4HI	GCNGC	6 cut(s)	81, 184, 523, 569, 935, 1297
FspBI	CTAG	4 cut(s)	102, 407, 572, 1302
GlaI	GCGC	5 cut(s)	331, 707, 839, 1196, 1300
GluI	GCNGC	6 cut(s)	81, 184, 523, 569, 935, 1297
GsaI	CCCAGC	1 cut(s)	934
GsuI	CTGGAG	2 cut(s)	651, 923
HaeII	RGCGCY	3 cut(s)	841, 1198, 1302
HapII	CCGG	4 cut(s)	876, 1149, 1354, 1606
HgaI	GACGC	4 cut(s)	546, 586, 603, 911
HhaI	GCGC	5 cut(s)	332, 708, 840, 1197, 1301
Hin1I	GRCGYC	4 cut(s)	538, 838, 1131, 1195
Hin1II	CATG	7 cut(s)	1072, 1093, 1183, 1274, 1411, 1459, 1471
Hin6I	GCGC	5 cut(s)	330, 706, 838, 1195, 1299
HinP1I	GCGC	5 cut(s)	330, 706, 838, 1195, 1299
HinfI	GANTC	6 cut(s)	6, 296, 351, 461, 633, 646
HpaII	CCGG	4 cut(s)	876, 1149, 1354, 1606
HphI	GGTGA	6 cut(s)	78, 346, 572, 620, 628, 1327
Hpy166II	GTNNAC	6 cut(s)	74, 412, 818, 1135, 1279, 1318
Hpy188I	TCNGA	5 cut(s)	291, 348, 466, 475, 593
Hpy188III	TCNNGA	3 cut(s)	446, 1438, 1631
Hpy8I	GTNNAC	6 cut(s)	74, 412, 818, 1135, 1279, 1318
Hpy99I	CGWCG	5 cut(s)	419, 597, 905, 1133, 1508
HpyAV	CCTTC	4 cut(s)	383, 599, 822, 1444
HpyCH4III	ACNGT	6 cut(s)	71, 578, 659, 1053, 1538, 1579
HpyCH4IV	ACGT	5 cut(s)	414, 985, 1131, 1284, 1506
HpyCH4V	TGCA	2 cut(s)	1036, 1399
HpyF10VI	GCNNNNNNNGC	8 cut(s)	276, 338, 519, 626, 705, 712, 844, 1363
HpyF3I	CTNAG	4 cut(s)	187, 207, 1190, 1205
HpySE526I	ACGT	5 cut(s)	414, 985, 1131, 1284, 1506
Hsp92I	GRCGYC	4 cut(s)	538, 838, 1131, 1195
Hsp92II	CATG	7 cut(s)	1072, 1093, 1183, 1274, 1411, 1459, 1471
HspAI	GCGC	5 cut(s)	330, 706, 838, 1195, 1299
KasI	GGCGCC	2 cut(s)	837, 1194
KroI	GCCGGC	1 cut(s)	875
KroNI	GCCGGC	1 cut(s)	877
Ksp22I	TGATCA	1 cut(s)	117
Kzo9I	GATC	4 cut(s)	117, 243, 291, 1010
LguI	GCTCTTC	2 cut(s)	1085, 1373
LmnI	GCTCC	6 cut(s)	438, 466, 897, 942, 1075, 1595
Lsp1109I	GCAGC	3 cut(s)	170, 580, 1308
LweI	GCATC	2 cut(s)	1164, 1624
MabI	ACCWGGT	1 cut(s)	1347
MaeI	CTAG	4 cut(s)	102, 407, 572, 1302
MaeII	ACGT	5 cut(s)	414, 985, 1131, 1284, 1506
MaeIII	GTNAC	5 cut(s)	578, 634, 659, 749, 1085
MalI	GATC	4 cut(s)	119, 245, 293, 1012
MboI	GATC	4 cut(s)	117, 243, 291, 1010
MboII	GAAGA	7 cut(s)	166, 470, 1072, 1105, 1216, 1360, 1593
MflI	RGATCY	1 cut(s)	243
MhlI	GDGCHC	5 cut(s)	261, 435, 1080, 1498, 1592
MlsI	TGGCCA	1 cut(s)	131
MluCI	AATT	1 cut(s)	734
MluI	ACGCGT	1 cut(s)	595
MluNI	TGGCCA	1 cut(s)	131
Mly113I	GGCGCC	2 cut(s)	838, 1195
MlyI	GAGTC	3 cut(s)	305, 640, 642
MmeI	TCCRAC	2 cut(s)	269, 616
Mox20I	TGGCCA	1 cut(s)	131
MroNI	GCCGGC	1 cut(s)	875
MscI	TGGCCA	1 cut(s)	131
MseI	TTAA	1 cut(s)	1639
MslI	CAYNNNNRTG	2 cut(s)	125, 1094
Msp20I	TGGCCA	1 cut(s)	131
MspA1I	CMGCKG	3 cut(s)	235, 629, 934
MspI	CCGG	4 cut(s)	876, 1149, 1354, 1606
MspR9I	CCNGG	8 cut(s)	301, 314, 438, 494, 835, 941, 1349, 1606
MvaI	CCWGG	7 cut(s)	301, 314, 438, 494, 835, 941, 1349
MvnI	CGCG	2 cut(s)	255, 597
MwoI	GCNNNNNNNGC	8 cut(s)	276, 338, 519, 626, 705, 712, 844, 1363
NaeI	GCCGGC	1 cut(s)	877
NarI	GGCGCC	2 cut(s)	838, 1195
NciI	CCSGG	1 cut(s)	1606
NcoI	CCATGG	1 cut(s)	1467
NdeII	GATC	4 cut(s)	117, 243, 291, 1010
NgoMIV	GCCGGC	1 cut(s)	875
NlaIII	CATG	7 cut(s)	1072, 1093, 1183, 1274, 1411, 1459, 1471
NlaIV	GGNNCC	6 cut(s)	590, 839, 938, 1196, 1553, 1610
NmeAIII	GCCGAG	1 cut(s)	1237
NmuCI	GTSAC	3 cut(s)	578, 634, 1085
NspI	RCATGY	1 cut(s)	1183
PaeI	GCATGC	1 cut(s)	1183
PaqCI	CACCTGC	1 cut(s)	647
PciSI	GCTCTTC	2 cut(s)	1085, 1373
PcsI	WCGNNNNNNNCGW	2 cut(s)	996, 1326
PdiI	GCCGGC	1 cut(s)	877
PfeI	GAWTC	3 cut(s)	6, 351, 461
PflFI	GACNNNGTC	3 cut(s)	995, 1349, 1508
PflMI	CCANNNNNTGG	1 cut(s)	427
PkrI	GCNGC	6 cut(s)	82, 185, 524, 570, 936, 1298
PleI	GAGTC	3 cut(s)	304, 640, 641
PluTI	GGCGCC	2 cut(s)	841, 1198
PpsI	GAGTC	3 cut(s)	304, 640, 641
PpuMI	RGGWCCY	1 cut(s)	1479
PshAI	GACNNNNGTC	1 cut(s)	1484
Psp124BI	GAGCTC	2 cut(s)	1080, 1592
Psp5II	RGGWCCY	1 cut(s)	1479
Psp6I	CCWGG	7 cut(s)	299, 312, 436, 492, 833, 939, 1347
PspEI	GGTNACC	2 cut(s)	659, 749
PspFI	CCCAGC	1 cut(s)	930
PspGI	CCWGG	7 cut(s)	299, 312, 436, 492, 833, 939, 1347
PspN4I	GGNNCC	6 cut(s)	590, 839, 938, 1196, 1553, 1610
PspPI	GGNCC	8 cut(s)	490, 589, 831, 1351, 1479, 1510, 1534, 1608
PspPPI	RGGWCCY	1 cut(s)	1479
PsrI	GAACNNNNNNTAC	2 cut(s)	1544, 1576
PsuI	RGATCY	1 cut(s)	243
PsyI	GACNNNGTC	3 cut(s)	995, 1349, 1508
PvuII	CAGCTG	1 cut(s)	235
RsaI	GTAC	2 cut(s)	1427, 1562
RsaNI	GTAC	2 cut(s)	1426, 1561
RseI	CAYNNNNRTG	2 cut(s)	125, 1094
SacI	GAGCTC	2 cut(s)	1080, 1592
SapI	GCTCTTC	2 cut(s)	1085, 1373
SaqAI	TTAA	1 cut(s)	1639
SatI	GCNGC	6 cut(s)	81, 184, 523, 569, 935, 1297
Sau3AI	GATC	4 cut(s)	117, 243, 291, 1010
Sau96I	GGNCC	8 cut(s)	490, 589, 831, 1351, 1479, 1510, 1534, 1608
SchI	GAGTC	3 cut(s)	305, 640, 642
ScrFI	CCNGG	8 cut(s)	301, 314, 438, 494, 835, 941, 1349, 1606
SduI	GDGCHC	5 cut(s)	261, 435, 1080, 1498, 1592
SexAI	ACCWGGT	1 cut(s)	1347
SfaNI	GCATC	2 cut(s)	1164, 1624
SfcI	CTRYAG	2 cut(s)	1135, 1243
SfiI	GGCCNNNNNGGCC	1 cut(s)	519
SfoI	GGCGCC	2 cut(s)	839, 1196
SinI	GGWCC	7 cut(s)	589, 831, 1351, 1479, 1510, 1534, 1608
SmiMI	CAYNNNNRTG	2 cut(s)	125, 1094
SmlI	CTYRAG	2 cut(s)	1556, 1594
SmoI	CTYRAG	2 cut(s)	1556, 1594
SpeI	ACTAGT	1 cut(s)	406
SphI	GCATGC	1 cut(s)	1183
Sse9I	AATT	1 cut(s)	734
SspDI	GGCGCC	2 cut(s)	837, 1194
SspMI	CTAG	4 cut(s)	102, 407, 572, 1302
SstI	GAGCTC	2 cut(s)	1080, 1592
StyD4I	CCNGG	8 cut(s)	299, 312, 436, 492, 833, 939, 1347, 1604
StyI	CCWWGG	3 cut(s)	421, 728, 1467
TaaI	ACNGT	6 cut(s)	71, 578, 659, 1053, 1538, 1579
TaiI	ACGT	5 cut(s)	417, 988, 1134, 1287, 1509
TaqI	TCGA	5 cut(s)	294, 882, 915, 990, 999
TaqII	GACCGA	1 cut(s)	1457
TasI	AATT	1 cut(s)	734
TatI	WGTACW	2 cut(s)	1425, 1560
TauI	GCSGC	3 cut(s)	83, 525, 937
TfiI	GAWTC	3 cut(s)	6, 351, 461
Tru1I	TTAA	1 cut(s)	1639
Tru9I	TTAA	1 cut(s)	1639
TscAI	CASTG	4 cut(s)	120, 332, 1213, 1259
TseFI	GTSAC	3 cut(s)	578, 634, 1085
TseI	GCWGC	3 cut(s)	183, 568, 1296
Tsp45I	GTSAC	3 cut(s)	578, 634, 1085
TspDTI	ATGAA	6 cut(s)	1071, 1106, 1112, 1287, 1360, 1475
TspGWI	ACGGA	2 cut(s)	1431, 1474
TspRI	CASTG	4 cut(s)	120, 332, 1213, 1259
Tth111I	GACNNNGTC	3 cut(s)	995, 1349, 1508
Van91I	CCANNNNNTGG	1 cut(s)	427
VpaK11BI	GGWCC	7 cut(s)	589, 831, 1351, 1479, 1510, 1534, 1608
XapI	RAATTY	1 cut(s)	734
XceI	RCATGY	1 cut(s)	1183
XmiI	GTMKAC	3 cut(s)	73, 1134, 1278
XspI	CTAG	4 cut(s)	102, 407, 572, 1302
ZraI	GACGTC	1 cut(s)	1132

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.