seed storage protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 824 |
| AatII | GACGTC | 1 cut(s) | 612 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 586 |
| AccBSI | CCGCTC | 1 cut(s) | 810 |
| AccII | CGCG | 3 cut(s) | 603, 1089, 1524 |
| AciI | CCGC | 8 cut(s) | 249, 318, 603, 718, 771, 810, 1406, 1522 |
| AclWI | GGATC | 4 cut(s) | 650, 1234, 1247, 1370 |
| AcoI | YGGCCR | 1 cut(s) | 741 |
| AcsI | RAATTY | 1 cut(s) | 285 |
| AcuI | CTGAAG | 1 cut(s) | 857 |
| AcyI | GRCGYC | 1 cut(s) | 609 |
| AfaI | GTAC | 3 cut(s) | 179, 1070, 1217 |
| AflIII | ACRYGT | 3 cut(s) | 592, 1065, 1269 |
| AgsI | TTSAA | 5 cut(s) | 242, 302, 844, 1372, 1498 |
| AjiI | CACGTC | 1 cut(s) | 1066 |
| AjnI | CCWGG | 4 cut(s) | 331, 625, 924, 1161 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 888, 920 |
| AluBI | AGCT | 8 cut(s) | 10, 97, 202, 833, 871, 1107, 1300, 1481 |
| AluI | AGCT | 8 cut(s) | 10, 97, 202, 833, 871, 1107, 1300, 1481 |
| Alw26I | GTCTC | 6 cut(s) | 338, 592, 600, 967, 1004, 1502 |
| AlwI | GGATC | 4 cut(s) | 650, 1234, 1247, 1370 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 632 |
| Ama87I | CYCGRG | 1 cut(s) | 1472 |
| AoxI | GGCC | 7 cut(s) | 385, 418, 466, 523, 741, 935, 1000 |
| ApeKI | GCWGC | 5 cut(s) | 60, 361, 868, 1020, 1526 |
| ApoI | RAATTY | 1 cut(s) | 285 |
| AspA2I | CCTAGG | 1 cut(s) | 1081 |
| AspLEI | GCGC | 1 cut(s) | 1526 |
| AspS9I | GGNCC | 5 cut(s) | 184, 328, 917, 1029, 1276 |
| AvaI | CYCGRG | 1 cut(s) | 1472 |
| AvaII | GGWCC | 5 cut(s) | 184, 328, 917, 1029, 1276 |
| AvrII | CCTAGG | 1 cut(s) | 1081 |
| BamHI | GGATCC | 1 cut(s) | 1239 |
| BauI | CACGAG | 4 cut(s) | 1034, 1056, 1149, 1301 |
| BbsI | GAAGAC | 1 cut(s) | 466 |
| BbvCI | CCTCAGC | 2 cut(s) | 93, 198 |
| BbvI | GCAGC | 5 cut(s) | 47, 373, 880, 1032, 1513 |
| BccI | CCATC | 2 cut(s) | 1127, 1168 |
| BceAI | ACGGC | 2 cut(s) | 73, 1015 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 4, 38 |
| BciT130I | CCWGG | 4 cut(s) | 333, 627, 926, 1163 |
| BclI | TGATCA | 1 cut(s) | 1392 |
| BcoDI | GTCTC | 6 cut(s) | 338, 592, 600, 967, 1004, 1502 |
| BfaI | CTAG | 4 cut(s) | 125, 726, 1082, 1482 |
| BfmI | CTRYAG | 2 cut(s) | 98, 1018 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 993 |
| BglII | AGATCT | 2 cut(s) | 1209, 1464 |
| BisI | GCNGC | 5 cut(s) | 61, 362, 869, 1021, 1527 |
| BlnI | CCTAGG | 1 cut(s) | 1081 |
| BlpI | GCTNAGC | 2 cut(s) | 11, 864 |
| BlsI | GCNGC | 5 cut(s) | 62, 363, 870, 1022, 1528 |
| BmcAI | AGTACT | 1 cut(s) | 179 |
| Bme1390I | CCNGG | 4 cut(s) | 333, 627, 926, 1163 |
| Bme18I | GGWCC | 5 cut(s) | 184, 328, 917, 1029, 1276 |
| BmeT110I | CYCGRG | 1 cut(s) | 1472 |
| BmgBI | CACGTC | 1 cut(s) | 1066 |
| BmgT120I | GGNCC | 5 cut(s) | 184, 328, 917, 1029, 1276 |
| BmiI | GGNNCC | 7 cut(s) | 87, 185, 330, 566, 918, 1031, 1241 |
| BmrFI | CCNGG | 4 cut(s) | 333, 627, 926, 1163 |
| BmrI | ACTGGG | 1 cut(s) | 190 |
| BmsI | GCATC | 1 cut(s) | 357 |
| BmuI | ACTGGG | 1 cut(s) | 190 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1097 |
| BpiI | GAAGAC | 1 cut(s) | 466 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 925, 957, 1349, 1381 |
| BpmI | CTGGAG | 3 cut(s) | 609, 1145, 1245 |
| Bpu10I | CCTNAGC | 2 cut(s) | 93, 198 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 11, 864 |
| BpuEI | CTTGAG | 4 cut(s) | 819, 1025, 1444, 1526 |
| BsaAI | YACGTR | 1 cut(s) | 983 |
| BsaHI | GRCGYC | 1 cut(s) | 609 |
| BsaI | GGTCTC | 2 cut(s) | 338, 1502 |
| BsaJI | CCNNGG | 9 cut(s) | 331, 392, 425, 473, 530, 1081, 1162, 1342, 1473 |
| Bse118I | RCCGGY | 2 cut(s) | 164, 1529 |
| Bse1I | ACTGG | 4 cut(s) | 185, 644, 1228, 1336 |
| Bse3DI | GCAATG | 2 cut(s) | 1395, 1430 |
| BseBI | CCWGG | 4 cut(s) | 333, 627, 926, 1163 |
| BseDI | CCNNGG | 9 cut(s) | 331, 392, 425, 473, 530, 1081, 1162, 1342, 1473 |
| BseGI | GGATG | 2 cut(s) | 341, 1308 |
| BseMI | GCAATG | 2 cut(s) | 1395, 1430 |
| BseMII | CTCAG | 6 cut(s) | 25, 107, 212, 666, 878, 1153 |
| BseNI | ACTGG | 4 cut(s) | 185, 644, 1228, 1336 |
| BseRI | GAGGAG | 6 cut(s) | 11, 35, 81, 980, 1022, 1571 |
| BseXI | GCAGC | 5 cut(s) | 47, 373, 880, 1032, 1513 |
| BseYI | CCCAGC | 1 cut(s) | 1076 |
| BsgI | GTGCAG | 2 cut(s) | 1204, 1307 |
| Bsh1236I | CGCG | 3 cut(s) | 603, 1089, 1524 |
| Bsh1285I | CGRYCG | 1 cut(s) | 718 |
| BshFI | GGCC | 7 cut(s) | 387, 420, 468, 525, 743, 937, 1002 |
| BsiEI | CGRYCG | 1 cut(s) | 718 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1472 |
| BsiSI | CCGG | 3 cut(s) | 165, 744, 1530 |
| BsmAI | GTCTC | 6 cut(s) | 338, 592, 600, 967, 1004, 1502 |
| BsmBI | CGTCTC | 2 cut(s) | 592, 600 |
| BsnI | GGCC | 7 cut(s) | 387, 420, 468, 525, 743, 937, 1002 |
| Bso31I | GGTCTC | 2 cut(s) | 338, 1502 |
| BsoBI | CYCGRG | 1 cut(s) | 1472 |
| Bsp1407I | TGTACA | 1 cut(s) | 1068 |
| Bsp143I | GATC | 9 cut(s) | 171, 642, 1209, 1239, 1362, 1392, 1464, 1488, 1551 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 11, 864 |
| Bsp19I | CCATGG | 4 cut(s) | 392, 425, 473, 530 |
| BspACI | CCGC | 8 cut(s) | 249, 318, 603, 718, 771, 810, 1406, 1522 |
| BspANI | GGCC | 7 cut(s) | 387, 420, 468, 525, 743, 937, 1002 |
| BspCNI | CTCAG | 6 cut(s) | 24, 106, 211, 665, 877, 1152 |
| BspFNI | CGCG | 3 cut(s) | 603, 1089, 1524 |
| BspLI | GGNNCC | 7 cut(s) | 87, 185, 330, 566, 918, 1031, 1241 |
| BspMAI | CTGCAG | 1 cut(s) | 1022 |
| BspPI | GGATC | 4 cut(s) | 650, 1234, 1247, 1370 |
| BspQI | GCTCTTC | 1 cut(s) | 687 |
| BspTNI | GGTCTC | 2 cut(s) | 338, 1502 |
| BsrBI | CCGCTC | 1 cut(s) | 810 |
| BsrDI | GCAATG | 2 cut(s) | 1395, 1430 |
| BsrFI | RCCGGY | 2 cut(s) | 164, 1529 |
| BsrGI | TGTACA | 1 cut(s) | 1068 |
| BsrI | ACTGG | 4 cut(s) | 185, 644, 1228, 1336 |
| BssAI | RCCGGY | 2 cut(s) | 164, 1529 |
| BssECI | CCNNGG | 9 cut(s) | 331, 392, 425, 473, 530, 1081, 1162, 1342, 1473 |
| BssMI | GATC | 9 cut(s) | 171, 642, 1209, 1239, 1362, 1392, 1464, 1488, 1551 |
| BssNI | GRCGYC | 1 cut(s) | 609 |
| BssSI | CACGAG | 4 cut(s) | 1034, 1056, 1149, 1301 |
| BssT1I | CCWWGG | 5 cut(s) | 392, 425, 473, 530, 1081 |
| Bst2BI | CACGAG | 4 cut(s) | 1034, 1056, 1149, 1301 |
| Bst2UI | CCWGG | 4 cut(s) | 333, 627, 926, 1163 |
| Bst4CI | ACNGT | 1 cut(s) | 1548 |
| Bst6I | CTCTTC | 2 cut(s) | 316, 687 |
| BstACI | GRCGYC | 1 cut(s) | 609 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 367 |
| BstAUI | TGTACA | 1 cut(s) | 1068 |
| BstBAI | YACGTR | 1 cut(s) | 983 |
| BstDEI | CTNAG | 7 cut(s) | 11, 93, 198, 652, 864, 944, 1139 |
| BstDSI | CCRYGG | 5 cut(s) | 392, 425, 473, 530, 1342 |
| BstF5I | GGATG | 2 cut(s) | 341, 1308 |
| BstFNI | CGCG | 3 cut(s) | 603, 1089, 1524 |
| BstHHI | GCGC | 1 cut(s) | 1526 |
| BstKTI | GATC | 9 cut(s) | 174, 645, 1212, 1242, 1365, 1395, 1467, 1491, 1554 |
| BstMAI | GTCTC | 6 cut(s) | 338, 592, 600, 967, 1004, 1502 |
| BstMBI | GATC | 9 cut(s) | 171, 642, 1209, 1239, 1362, 1392, 1464, 1488, 1551 |
| BstMCI | CGRYCG | 1 cut(s) | 718 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 367, 993, 1086, 1095, 1104 |
| BstNI | CCWGG | 4 cut(s) | 333, 627, 926, 1163 |
| BstNSI | RCATGY | 2 cut(s) | 577, 596 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1097 |
| BstSCI | CCNGG | 4 cut(s) | 331, 625, 924, 1161 |
| BstSFI | CTRYAG | 2 cut(s) | 98, 1018 |
| BstUI | CGCG | 3 cut(s) | 603, 1089, 1524 |
| BstV1I | GCAGC | 5 cut(s) | 47, 373, 880, 1032, 1513 |
| BstV2I | GAAGAC | 1 cut(s) | 466 |
| BstX2I | RGATCY | 5 cut(s) | 642, 1209, 1239, 1362, 1464 |
| BstYI | RGATCY | 5 cut(s) | 642, 1209, 1239, 1362, 1464 |
| BsuRI | GGCC | 7 cut(s) | 387, 420, 468, 525, 743, 937, 1002 |
| BtgI | CCRYGG | 5 cut(s) | 392, 425, 473, 530, 1342 |
| BtgZI | GCGATG | 3 cut(s) | 661, 676, 1187 |
| BtrI | CACGTC | 1 cut(s) | 1066 |
| BtsCI | GGATG | 2 cut(s) | 341, 1308 |
| BtsIMutI | CAGTG | 3 cut(s) | 637, 1147, 1221 |
| CaiI | CAGNNNCTG | 1 cut(s) | 632 |
| CfoI | GCGC | 1 cut(s) | 1526 |
| Cfr10I | RCCGGY | 2 cut(s) | 164, 1529 |
| Cfr13I | GGNCC | 5 cut(s) | 184, 328, 917, 1029, 1276 |
| CseI | GACGC | 3 cut(s) | 609, 827, 1087 |
| Csp6I | GTAC | 3 cut(s) | 178, 1069, 1216 |
| CviAII | CATG | 9 cut(s) | 352, 393, 426, 474, 531, 574, 593, 1024, 1195 |
| CviQI | GTAC | 3 cut(s) | 178, 1069, 1216 |
| DdeI | CTNAG | 7 cut(s) | 11, 93, 198, 652, 864, 944, 1139 |
| DpnI | GATC | 9 cut(s) | 173, 644, 1211, 1241, 1364, 1394, 1466, 1490, 1553 |
| DpnII | GATC | 9 cut(s) | 171, 642, 1209, 1239, 1362, 1392, 1464, 1488, 1551 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 824 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 824 |
| EaeI | YGGCCR | 1 cut(s) | 741 |
| Eam1104I | CTCTTC | 2 cut(s) | 316, 687 |
| EarI | CTCTTC | 2 cut(s) | 316, 687 |
| Eco130I | CCWWGG | 5 cut(s) | 392, 425, 473, 530, 1081 |
| Eco31I | GGTCTC | 2 cut(s) | 338, 1502 |
| Eco47I | GGWCC | 5 cut(s) | 184, 328, 917, 1029, 1276 |
| Eco57I | CTGAAG | 1 cut(s) | 857 |
| Eco88I | CYCGRG | 1 cut(s) | 1472 |
| EcoO109I | RGGNCCY | 2 cut(s) | 917, 1029 |
| EcoRII | CCWGG | 4 cut(s) | 331, 625, 924, 1161 |
| EcoT14I | CCWWGG | 5 cut(s) | 392, 425, 473, 530, 1081 |
| ErhI | CCWWGG | 5 cut(s) | 392, 425, 473, 530, 1081 |
| Esp3I | CGTCTC | 2 cut(s) | 592, 600 |
| FaeI | CATG | 9 cut(s) | 355, 396, 429, 477, 534, 577, 596, 1027, 1198 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 237, 269 |
| FatI | CATG | 9 cut(s) | 351, 392, 425, 473, 530, 573, 592, 1023, 1194 |
| FauI | CCCGC | 3 cut(s) | 803, 1399, 1529 |
| FbaI | TGATCA | 1 cut(s) | 1392 |
| Fnu4HI | GCNGC | 5 cut(s) | 61, 362, 869, 1021, 1527 |
| FokI | GGATG | 2 cut(s) | 348, 1295 |
| Fsp4HI | GCNGC | 5 cut(s) | 61, 362, 869, 1021, 1527 |
| FspBI | CTAG | 4 cut(s) | 125, 726, 1082, 1482 |
| GlaI | GCGC | 1 cut(s) | 1525 |
| GluI | GCNGC | 5 cut(s) | 61, 362, 869, 1021, 1527 |
| GsaI | CCCAGC | 1 cut(s) | 1080 |
| GsuI | CTGGAG | 3 cut(s) | 609, 1145, 1245 |
| HaeIII | GGCC | 7 cut(s) | 387, 420, 468, 525, 743, 937, 1002 |
| HapII | CCGG | 3 cut(s) | 165, 744, 1530 |
| HgaI | GACGC | 3 cut(s) | 609, 827, 1087 |
| HhaI | GCGC | 1 cut(s) | 1526 |
| Hin1I | GRCGYC | 1 cut(s) | 609 |
| Hin1II | CATG | 9 cut(s) | 355, 396, 429, 477, 534, 577, 596, 1027, 1198 |
| Hin6I | GCGC | 1 cut(s) | 1524 |
| HinP1I | GCGC | 1 cut(s) | 1524 |
| HincII | GTYRAC | 2 cut(s) | 1102, 1252 |
| HindII | GTYRAC | 2 cut(s) | 1102, 1252 |
| HinfI | GANTC | 1 cut(s) | 356 |
| HpaII | CCGG | 3 cut(s) | 165, 744, 1530 |
| Hpy166II | GTNNAC | 4 cut(s) | 776, 1069, 1102, 1252 |
| Hpy188I | TCNGA | 3 cut(s) | 171, 206, 876 |
| Hpy188III | TCNNGA | 7 cut(s) | 154, 654, 686, 931, 1423, 1462, 1472 |
| Hpy8I | GTNNAC | 4 cut(s) | 776, 1069, 1102, 1252 |
| Hpy99I | CGWCG | 2 cut(s) | 299, 821 |
| HpyAV | CCTTC | 9 cut(s) | 43, 277, 358, 425, 473, 530, 577, 1230, 1285 |
| HpyCH4III | ACNGT | 1 cut(s) | 1548 |
| HpyCH4IV | ACGT | 7 cut(s) | 294, 609, 852, 982, 1065, 1269, 1329 |
| HpyCH4V | TGCA | 6 cut(s) | 29, 370, 577, 1020, 1221, 1288 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 367, 993, 1086, 1095, 1104 |
| HpyF3I | CTNAG | 7 cut(s) | 11, 93, 198, 652, 864, 944, 1139 |
| HpySE526I | ACGT | 7 cut(s) | 294, 609, 852, 982, 1065, 1269, 1329 |
| Hsp92I | GRCGYC | 1 cut(s) | 609 |
| Hsp92II | CATG | 9 cut(s) | 355, 396, 429, 477, 534, 577, 596, 1027, 1198 |
| HspAI | GCGC | 1 cut(s) | 1524 |
| Ksp22I | TGATCA | 1 cut(s) | 1392 |
| Kzo9I | GATC | 9 cut(s) | 171, 642, 1209, 1239, 1362, 1392, 1464, 1488, 1551 |
| LguI | GCTCTTC | 1 cut(s) | 687 |
| LmnI | GCTCC | 2 cut(s) | 207, 807 |
| Lsp1109I | GCAGC | 5 cut(s) | 47, 373, 880, 1032, 1513 |
| LweI | GCATC | 1 cut(s) | 357 |
| MaeI | CTAG | 4 cut(s) | 125, 726, 1082, 1482 |
| MaeII | ACGT | 7 cut(s) | 294, 609, 852, 982, 1065, 1269, 1329 |
| MaeIII | GTNAC | 4 cut(s) | 75, 110, 569, 1090 |
| MalI | GATC | 9 cut(s) | 173, 644, 1211, 1241, 1364, 1394, 1466, 1490, 1553 |
| MbiI | CCGCTC | 1 cut(s) | 810 |
| MboI | GATC | 9 cut(s) | 171, 642, 1209, 1239, 1362, 1392, 1464, 1488, 1551 |
| MboII | GAAGA | 5 cut(s) | 262, 333, 471, 674, 1498 |
| MflI | RGATCY | 5 cut(s) | 642, 1209, 1239, 1362, 1464 |
| MluCI | AATT | 3 cut(s) | 237, 285, 846 |
| MlyI | GAGTC | 1 cut(s) | 350 |
| MmeI | TCCRAC | 1 cut(s) | 1254 |
| MseI | TTAA | 4 cut(s) | 6, 54, 912, 1573 |
| MspA1I | CMGCKG | 1 cut(s) | 318 |
| MspI | CCGG | 3 cut(s) | 165, 744, 1530 |
| MspR9I | CCNGG | 4 cut(s) | 333, 627, 926, 1163 |
| MvaI | CCWGG | 4 cut(s) | 333, 627, 926, 1163 |
| MvnI | CGCG | 3 cut(s) | 603, 1089, 1524 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 367, 993, 1086, 1095, 1104 |
| NcoI | CCATGG | 4 cut(s) | 392, 425, 473, 530 |
| NdeII | GATC | 9 cut(s) | 171, 642, 1209, 1239, 1362, 1392, 1464, 1488, 1551 |
| NlaIII | CATG | 9 cut(s) | 355, 396, 429, 477, 534, 577, 596, 1027, 1198 |
| NlaIV | GGNNCC | 7 cut(s) | 87, 185, 330, 566, 918, 1031, 1241 |
| NmeAIII | GCCGAG | 1 cut(s) | 367 |
| NmuCI | GTSAC | 3 cut(s) | 75, 569, 1090 |
| NspI | RCATGY | 2 cut(s) | 577, 596 |
| PciI | ACATGT | 1 cut(s) | 592 |
| PciSI | GCTCTTC | 1 cut(s) | 687 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 684, 1266 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 586 |
| PkrI | GCNGC | 5 cut(s) | 62, 363, 870, 1022, 1528 |
| PleI | GAGTC | 1 cut(s) | 350 |
| PpsI | GAGTC | 1 cut(s) | 350 |
| Ppu21I | YACGTR | 1 cut(s) | 983 |
| PpuMI | RGGWCCY | 2 cut(s) | 917, 1029 |
| PscI | ACATGT | 1 cut(s) | 592 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1097 |
| Psp5II | RGGWCCY | 2 cut(s) | 917, 1029 |
| Psp6I | CCWGG | 4 cut(s) | 331, 625, 924, 1161 |
| PspFI | CCCAGC | 1 cut(s) | 1076 |
| PspGI | CCWGG | 4 cut(s) | 331, 625, 924, 1161 |
| PspN4I | GGNNCC | 7 cut(s) | 87, 185, 330, 566, 918, 1031, 1241 |
| PspPI | GGNCC | 5 cut(s) | 184, 328, 917, 1029, 1276 |
| PspPPI | RGGWCCY | 2 cut(s) | 917, 1029 |
| PstI | CTGCAG | 1 cut(s) | 1022 |
| PstNI | CAGNNNCTG | 1 cut(s) | 632 |
| PsuI | RGATCY | 5 cut(s) | 642, 1209, 1239, 1362, 1464 |
| RsaI | GTAC | 3 cut(s) | 179, 1070, 1217 |
| RsaNI | GTAC | 3 cut(s) | 178, 1069, 1216 |
| SapI | GCTCTTC | 1 cut(s) | 687 |
| SaqAI | TTAA | 4 cut(s) | 6, 54, 912, 1573 |
| SatI | GCNGC | 5 cut(s) | 61, 362, 869, 1021, 1527 |
| Sau3AI | GATC | 9 cut(s) | 171, 642, 1209, 1239, 1362, 1392, 1464, 1488, 1551 |
| Sau96I | GGNCC | 5 cut(s) | 184, 328, 917, 1029, 1276 |
| ScaI | AGTACT | 1 cut(s) | 179 |
| SchI | GAGTC | 1 cut(s) | 350 |
| ScrFI | CCNGG | 4 cut(s) | 333, 627, 926, 1163 |
| SfaNI | GCATC | 1 cut(s) | 357 |
| SfcI | CTRYAG | 2 cut(s) | 98, 1018 |
| SinI | GGWCC | 5 cut(s) | 184, 328, 917, 1029, 1276 |
| SmlI | CTYRAG | 4 cut(s) | 834, 1004, 1423, 1505 |
| SmoI | CTYRAG | 4 cut(s) | 834, 1004, 1423, 1505 |
| Sse9I | AATT | 3 cut(s) | 237, 285, 846 |
| SsiI | CCGC | 8 cut(s) | 249, 318, 603, 718, 771, 810, 1406, 1522 |
| SspMI | CTAG | 4 cut(s) | 125, 726, 1082, 1482 |
| StyD4I | CCNGG | 4 cut(s) | 331, 625, 924, 1161 |
| StyI | CCWWGG | 5 cut(s) | 392, 425, 473, 530, 1081 |
| TaaI | ACNGT | 1 cut(s) | 1548 |
| TaiI | ACGT | 7 cut(s) | 297, 612, 855, 985, 1068, 1272, 1332 |
| TaqI | TCGA | 8 cut(s) | 117, 174, 687, 714, 816, 1356, 1554, 1566 |
| TasI | AATT | 3 cut(s) | 237, 285, 846 |
| TatI | WGTACW | 3 cut(s) | 177, 1068, 1215 |
| Tru1I | TTAA | 4 cut(s) | 6, 54, 912, 1573 |
| Tru9I | TTAA | 4 cut(s) | 6, 54, 912, 1573 |
| TscAI | CASTG | 3 cut(s) | 644, 1147, 1228 |
| TseFI | GTSAC | 3 cut(s) | 75, 569, 1090 |
| TseI | GCWGC | 5 cut(s) | 60, 361, 868, 1020, 1526 |
| Tsp45I | GTSAC | 3 cut(s) | 75, 569, 1090 |
| TspDTI | ATGAA | 3 cut(s) | 340, 1211, 1395 |
| TspGWI | ACGGA | 4 cut(s) | 211, 557, 1275, 1359 |
| TspRI | CASTG | 3 cut(s) | 644, 1147, 1228 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 586 |
| VpaK11BI | GGWCC | 5 cut(s) | 184, 328, 917, 1029, 1276 |
| XapI | RAATTY | 1 cut(s) | 285 |
| XceI | RCATGY | 2 cut(s) | 577, 596 |
| XmaJI | CCTAGG | 1 cut(s) | 1081 |
| XspI | CTAG | 4 cut(s) | 125, 726, 1082, 1482 |
| ZraI | GACGTC | 1 cut(s) | 610 |
| ZrmI | AGTACT | 1 cut(s) | 179 |