Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Reverse (-)

18838131 .. 18840107

Gene Structure 1977 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012444

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGGCTAAGCCTATAGCTCTCACCTTTTCTCTCTGCTTGCTTGTCCTCTTCCACAGCTGCTTAGCAGCTCGCCAACAATCTCAGTCGAGCCAGCAGAATGAGTGCCAACTAGATCAGCTCCAAGCCCGCGAACCTGATAACCGCATTGAGACTGAGGCGGGTAGGATTGAGTCCTGGGACTACAACCGGGACGACTTCCAGTGTGCTGGTGTTGCCGTTCAACGAATTACCATTGAAAGAAATGGCCTTCACTTGCCTTCTTACACCCACGCTCCACAACTCACTTATGTCGTCCAAGGCAATGGTTTTCTATCAACTGTTTTCCCTGGCTGTCCTGAAACTTTTGAAGAAACTGAGCAATCTGATGAAGAACAACAAGGCCAGCAAGGGCGCCGCGGAAAGCAAGGTCGTGGACAACAAGAGCAGCAAGAACAAGAAGAGTATGAACAACAACAACAAGGCCGTGGACAACAAGGTCGTCATAGACAACAAGGGCAGCAAGGCCAACAGGGACAAGAGAGCTTCGAACAGCTAGACAGACACCAGAAGGTTCGACGCATCAGAGAAGGTGATGTGATTGCTATTCCTGCTGGTGTCACTTACTGGTCCTACAACGACGGTGACCAACCTCTTGTTGCTGTCAATCTTCTTGATATCAGCAACCAACAAAACCAGCTTGACCGTAACCCCAGGAGATTCTATCTTGCTGGTAACCCACAAGATGAGTTTAACCAACAAGGGCAAAGCCAGAGTCGACGGGGCCAGCAAGGACGTGGACAACAAGGGCAAGGCCAAAGTCAATGGGACCAGGACCAGCAACAGCAACAGCATGGTGGAAGGAGCAGGCACCAGCAACAACAACAAGGAAACAACAACAACAACATCTTCGCCGGCTTCAACACACAGCTTCTCGCTGACGCTCTGAACATCGATCAACAGACTGCCCAGCAGCTTCAGGGACAAAACGACAACAGACCCCAAATTGTGAGAGTTAGAGGACGTCTTGATTTCATCGAACCACCACGATCACAACAGGAGGAAAGACAACAACAGGGAATACAGAGACAACAGGGACAACAAGGACAGAATGGTTTTGAGGAGACATTCTGTAACTTCAGGATCAGAGAGAATATTGGCAGGCCTTCACGCGCCGACGTCTTCAGTCCCCAAGCTGGTCGCATCAGCACCCTCAACAGCTTTCAGTTGCCTATTCTCAGGTACCTTGACCTCAGCGCTGAGAGAGGCTTCTTCTACAATAATGCTATCTACAGTCCTCACTGGAACCTGAACGCCCATGAAGTCTACTACGTCATTAGAGGTAGTGCTAGGGTTCAGGTTGTGAATGACAATGGCCAGGCCATCTTGGACAATGAGGTCCGCCAGGGACAGCTCTTCATAGTGCCACAGAACCATGCAGTGTTGCAGAAGGCTAGCAACAATGGATACGAGTACATTGCTTTCAAGACCCAAGACAATGCTAAGATTAACACTCTTGCCGGCCGGACCTCAGTCTTGCGGGCACTCCCTGACGTGGTCCTCGCTAACGCGTACCAGATTGATCGACAACAGGCAAGGACTCTCAAGTACAACAGGCAGGAGACTGTTGCTTTGAGCTCATCAAGGTCTTCTCGATCCCAGAGGAACTGGTGGGATATTGCTGAAATGTTTGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

558

Amino Acids

63.86

Weight (kDa)

6.4

Isoelectric Point (pI)

65.63

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	41 - 239	1.4e-25	Cupin
Cupin_1	PF00190	377 - 524	4e-40	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	474, 1373
AatII	GACGTC	2 cut(s)	1003, 1158
Acc65I	GGTACC	1 cut(s)	1218
AccB1I	GGYRCC	3 cut(s)	390, 846, 1218
AccI	GTMKAC	2 cut(s)	754, 1302
AccII	CGCG	4 cut(s)	129, 396, 1149, 1547
AciI	CCGC	7 cut(s)	127, 142, 158, 394, 396, 1378, 1516
AclWI	GGATC	2 cut(s)	1127, 1626
AcoI	YGGCCR	2 cut(s)	1351, 1498
AcuI	CTGAAG	3 cut(s)	938, 1099, 1144
AcyI	GRCGYC	3 cut(s)	391, 1000, 1155
AfaI	GTAC	4 cut(s)	1220, 1451, 1550, 1586
AfeI	AGCGCT	1 cut(s)	1234
AfiI	CCNNNNNNNGG	2 cut(s)	1172, 1531
AflIII	ACRYGT	1 cut(s)	1545
AgsI	TTSAA	5 cut(s)	221, 236, 347, 898, 1462
AjiI	CACGTC	2 cut(s)	773, 1531
AjnI	CCWGG	6 cut(s)	173, 325, 689, 807, 1353, 1380
Alw21I	GWGCWC	1 cut(s)	1616
Alw26I	GTCTC	4 cut(s)	143, 1057, 1094, 1592
AlwI	GGATC	2 cut(s)	1127, 1626
Aor51HI	AGCGCT	1 cut(s)	1234
ApeKI	GCWGC	5 cut(s)	57, 65, 424, 496, 949
ArsI	GACNNNNNNTTYG	4 cut(s)	736, 768, 1591, 1623
Asp718I	GGTACC	1 cut(s)	1218
AspLEI	GCGC	3 cut(s)	393, 1151, 1235
AspS9I	GGNCC	7 cut(s)	606, 760, 805, 811, 1375, 1503, 1534
AsuC2I	CCSGG	1 cut(s)	188
AsuHPI	GGTGA	3 cut(s)	13, 581, 632
AsuII	TTCGAA	1 cut(s)	525
AsuNHI	GCTAGC	1 cut(s)	1430
AvaII	GGWCC	6 cut(s)	606, 805, 811, 1375, 1503, 1534
BaeGI	GKGCMC	1 cut(s)	1522
BalI	TGGCCA	1 cut(s)	1353
BanI	GGYRCC	3 cut(s)	390, 846, 1218
BanII	GRGCYC	1 cut(s)	1616
BbsI	GAAGAC	2 cut(s)	1150, 1617
Bbv12I	GWGCWC	1 cut(s)	1616
BbvCI	CCTCAGC	1 cut(s)	1229
BbvI	GCAGC	5 cut(s)	44, 77, 436, 508, 961
BccI	CCATC	1 cut(s)	1367
BceAI	ACGGC	2 cut(s)	200, 447
BcgI	CGANNNNNNTGC	2 cut(s)	1436, 1470
BciT130I	CCWGG	6 cut(s)	175, 327, 691, 809, 1355, 1382
BciVI	GTATCC	1 cut(s)	1436
BcnI	CCSGG	1 cut(s)	188
BcoDI	GTCTC	4 cut(s)	143, 1057, 1094, 1592
BfaI	CTAG	4 cut(s)	110, 533, 1326, 1431
BfmI	CTRYAG	2 cut(s)	12, 1267
BfoI	RGCGCY	2 cut(s)	394, 1236
BfuI	GTATCC	1 cut(s)	1436
BisI	GCNGC	6 cut(s)	58, 66, 394, 425, 497, 950
BlpI	GCTNAGC	2 cut(s)	6, 61
BlsI	GCNGC	6 cut(s)	59, 67, 395, 426, 498, 951
Bme1390I	CCNGG	7 cut(s)	175, 188, 327, 691, 809, 1355, 1382
Bme18I	GGWCC	6 cut(s)	606, 805, 811, 1375, 1503, 1534
BmgBI	CACGTC	2 cut(s)	773, 1531
BmgT120I	GGNCC	7 cut(s)	606, 760, 805, 811, 1375, 1503, 1534
BmiI	GGNNCC	6 cut(s)	392, 761, 806, 848, 1220, 1283
BmrFI	CCNGG	7 cut(s)	175, 188, 327, 691, 809, 1355, 1382
BmsI	GCATC	2 cut(s)	567, 1188
BmtI	GCTAGC	1 cut(s)	1434
BoxI	GACNNNNGTC	1 cut(s)	1508
BpiI	GAAGAC	2 cut(s)	1150, 1617
Bpu10I	CCTNAGC	1 cut(s)	1229
Bpu1102I	GCTNAGC	2 cut(s)	6, 61
Bpu14I	TTCGAA	1 cut(s)	525
BpuEI	CTTGAG	1 cut(s)	1565
BpuMI	CCSGG	1 cut(s)	188
Bsa29I	ATCGAT	1 cut(s)	930
BsaHI	GRCGYC	3 cut(s)	391, 1000, 1155
BsaJI	CCNNGG	7 cut(s)	174, 295, 325, 394, 463, 689, 1381
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	2 cut(s)	1172, 1531
Bse118I	RCCGGY	2 cut(s)	890, 1496
Bse1I	ACTGG	4 cut(s)	199, 608, 1283, 1649
Bse3DI	GCAATG	2 cut(s)	307, 1452
BseBI	CCWGG	6 cut(s)	175, 327, 691, 809, 1355, 1382
BseCI	ATCGAT	1 cut(s)	930
BseDI	CCNNGG	7 cut(s)	174, 295, 325, 394, 463, 689, 1381
BseLI	CCNNNNNNNGG	2 cut(s)	1172, 1531
BseMI	GCAATG	2 cut(s)	307, 1452
BseMII	CTCAG	7 cut(s)	95, 144, 345, 1227, 1228, 1243, 1521
BseNI	ACTGG	4 cut(s)	199, 608, 1283, 1649
BseRI	GAGGAG	1 cut(s)	1112
BseSI	GKGCMC	1 cut(s)	1522
BseX3I	CGGCCG	1 cut(s)	1498
BseXI	GCAGC	5 cut(s)	44, 77, 436, 508, 961
BseYI	CCCAGC	1 cut(s)	945
Bsh1236I	CGCG	4 cut(s)	129, 396, 1149, 1547
Bsh1285I	CGRYCG	1 cut(s)	1501
BshNI	GGYRCC	3 cut(s)	390, 846, 1218
BshVI	ATCGAT	1 cut(s)	930
BsiEI	CGRYCG	1 cut(s)	1501
BsiHKAI	GWGCWC	1 cut(s)	1616
BsiSI	CCGG	4 cut(s)	187, 891, 1497, 1501
BslFI	GGGAC	8 cut(s)	191, 203, 525, 818, 972, 1086, 1149, 1398
BslI	CCNNNNNNNGG	2 cut(s)	1172, 1531
BsmAI	GTCTC	4 cut(s)	143, 1057, 1094, 1592
BsmFI	GGGAC	8 cut(s)	191, 203, 525, 818, 972, 1086, 1149, 1398
Bsp119I	TTCGAA	1 cut(s)	525
Bsp1286I	GDGCHC	2 cut(s)	1522, 1616
Bsp143I	GATC	6 cut(s)	112, 931, 1025, 1119, 1558, 1631
Bsp1720I	GCTNAGC	2 cut(s)	6, 61
BspACI	CCGC	7 cut(s)	127, 142, 158, 394, 396, 1378, 1516
BspCNI	CTCAG	7 cut(s)	94, 145, 346, 1227, 1228, 1242, 1520
BspDI	ATCGAT	1 cut(s)	930
BspFNI	CGCG	4 cut(s)	129, 396, 1149, 1547
BspLI	GGNNCC	6 cut(s)	392, 761, 806, 848, 1220, 1283
BspOI	GCTAGC	1 cut(s)	1434
BspPI	GGATC	2 cut(s)	1127, 1626
BspQI	GCTCTTC	1 cut(s)	1397
BspT104I	TTCGAA	1 cut(s)	525
BspT107I	GGYRCC	3 cut(s)	390, 846, 1218
BsrDI	GCAATG	2 cut(s)	307, 1452
BsrFI	RCCGGY	2 cut(s)	890, 1496
BsrI	ACTGG	4 cut(s)	199, 608, 1283, 1649
BssAI	RCCGGY	2 cut(s)	890, 1496
BssECI	CCNNGG	7 cut(s)	174, 295, 325, 394, 463, 689, 1381
BssMI	GATC	6 cut(s)	112, 931, 1025, 1119, 1558, 1631
BssNI	GRCGYC	3 cut(s)	391, 1000, 1155
BssT1I	CCWWGG	1 cut(s)	295
Bst2UI	CCWGG	6 cut(s)	175, 327, 691, 809, 1355, 1382
Bst4CI	ACNGT	5 cut(s)	319, 620, 683, 1271, 1603
Bst6I	CTCTTC	3 cut(s)	53, 432, 1397
BstACI	GRCGYC	3 cut(s)	391, 1000, 1155
BstBI	TTCGAA	1 cut(s)	525
BstDSI	CCRYGG	2 cut(s)	394, 463
BstEII	GGTNACC	2 cut(s)	620, 710
BstFNI	CGCG	4 cut(s)	129, 396, 1149, 1547
BstH2I	RGCGCY	2 cut(s)	394, 1236
BstHHI	GCGC	3 cut(s)	393, 1151, 1235
BstKTI	GATC	6 cut(s)	115, 934, 1028, 1122, 1561, 1634
BstMAI	GTCTC	4 cut(s)	143, 1057, 1094, 1592
BstMBI	GATC	6 cut(s)	112, 931, 1025, 1119, 1558, 1631
BstMCI	CGRYCG	1 cut(s)	1501
BstMWI	GCNNNNNNNGC	2 cut(s)	212, 587
BstNI	CCWGG	6 cut(s)	175, 327, 691, 809, 1355, 1382
BstPAI	GACNNNNGTC	1 cut(s)	1508
BstPI	GGTNACC	2 cut(s)	620, 710
BstSCI	CCNGG	7 cut(s)	173, 186, 325, 689, 807, 1353, 1380
BstSFI	CTRYAG	2 cut(s)	12, 1267
BstSLI	GKGCMC	1 cut(s)	1522
BstUI	CGCG	4 cut(s)	129, 396, 1149, 1547
BstV1I	GCAGC	5 cut(s)	44, 77, 436, 508, 961
BstV2I	GAAGAC	2 cut(s)	1150, 1617
BstXI	CCANNNNNNTGG	2 cut(s)	206, 302
BstZI	CGGCCG	1 cut(s)	1498
Bsu15I	ATCGAT	1 cut(s)	930
BsuI	GTATCC	1 cut(s)	1436
BsuTUI	ATCGAT	1 cut(s)	930
BtgI	CCRYGG	2 cut(s)	394, 463
BtrI	CACGTC	2 cut(s)	773, 1531
BtsI	GCAGTG	1 cut(s)	1422
BtsIMutI	CAGTG	3 cut(s)	206, 1276, 1422
CfoI	GCGC	3 cut(s)	393, 1151, 1235
Cfr10I	RCCGGY	2 cut(s)	890, 1496
Cfr13I	GGNCC	7 cut(s)	606, 760, 805, 811, 1375, 1503, 1534
Cfr42I	CCGCGG	1 cut(s)	397
ClaI	ATCGAT	1 cut(s)	930
CseI	GACGC	2 cut(s)	564, 926
Csp6I	GTAC	4 cut(s)	1219, 1450, 1549, 1585
CviAII	CATG	3 cut(s)	830, 1295, 1412
CviQI	GTAC	4 cut(s)	1219, 1450, 1549, 1585
DinI	GGCGCC	1 cut(s)	392
DpnI	GATC	6 cut(s)	114, 933, 1027, 1121, 1560, 1633
DpnII	GATC	6 cut(s)	112, 931, 1025, 1119, 1558, 1631
DrdI	GACNNNNNNGTC	2 cut(s)	474, 1373
DseDI	GACNNNNNNGTC	2 cut(s)	474, 1373
EaeI	YGGCCR	2 cut(s)	1351, 1498
EagI	CGGCCG	1 cut(s)	1498
Eam1104I	CTCTTC	3 cut(s)	53, 432, 1397
EarI	CTCTTC	3 cut(s)	53, 432, 1397
EciI	GGCGGA	1 cut(s)	1367
Ecl136II	GAGCTC	1 cut(s)	1614
EclXI	CGGCCG	1 cut(s)	1498
Eco130I	CCWWGG	1 cut(s)	295
Eco147I	AGGCCT	1 cut(s)	1141
Eco24I	GRGCYC	1 cut(s)	1616
Eco32I	GATATC	1 cut(s)	655
Eco47I	GGWCC	6 cut(s)	606, 805, 811, 1375, 1503, 1534
Eco47III	AGCGCT	1 cut(s)	1234
Eco52I	CGGCCG	1 cut(s)	1498
Eco53kI	GAGCTC	1 cut(s)	1614
Eco57I	CTGAAG	3 cut(s)	938, 1099, 1144
Eco91I	GGTNACC	2 cut(s)	620, 710
EcoICRI	GAGCTC	1 cut(s)	1614
EcoO65I	GGTNACC	2 cut(s)	620, 710
EcoRII	CCWGG	6 cut(s)	173, 325, 689, 807, 1353, 1380
EcoRV	GATATC	1 cut(s)	655
EcoT14I	CCWWGG	1 cut(s)	295
EcoT38I	GRGCYC	1 cut(s)	1616
EgeI	GGCGCC	1 cut(s)	392
EheI	GGCGCC	1 cut(s)	392
ErhI	CCWWGG	1 cut(s)	295
FaeI	CATG	3 cut(s)	833, 1298, 1415
FaiI	YATR	9 cut(s)	14, 288, 444, 483, 831, 1296, 1397, 1413, 1672
FaqI	GGGAC	8 cut(s)	191, 203, 525, 818, 972, 1086, 1149, 1398
FatI	CATG	3 cut(s)	829, 1294, 1411
FauI	CCCGC	3 cut(s)	134, 151, 1509
FblI	GTMKAC	2 cut(s)	754, 1302
Fnu4HI	GCNGC	6 cut(s)	58, 66, 394, 425, 497, 950
FriOI	GRGCYC	1 cut(s)	1616
Fsp4HI	GCNGC	6 cut(s)	58, 66, 394, 425, 497, 950
FspBI	CTAG	4 cut(s)	110, 533, 1326, 1431
GlaI	GCGC	3 cut(s)	392, 1150, 1234
GluI	GCNGC	6 cut(s)	58, 66, 394, 425, 497, 950
GsaI	CCCAGC	1 cut(s)	949
HaeII	RGCGCY	2 cut(s)	394, 1236
HapII	CCGG	4 cut(s)	187, 891, 1497, 1501
HgaI	GACGC	2 cut(s)	564, 926
HhaI	GCGC	3 cut(s)	393, 1151, 1235
Hin1I	GRCGYC	3 cut(s)	391, 1000, 1155
Hin1II	CATG	3 cut(s)	833, 1298, 1415
Hin6I	GCGC	3 cut(s)	391, 1149, 1233
HinP1I	GCGC	3 cut(s)	391, 1149, 1233
HincII	GTYRAC	1 cut(s)	755
HindII	GTYRAC	1 cut(s)	755
HinfI	GANTC	4 cut(s)	170, 696, 751, 1576
HpaII	CCGG	4 cut(s)	187, 891, 1497, 1501
HphI	GGTGA	3 cut(s)	13, 581, 632
Hpy166II	GTNNAC	5 cut(s)	413, 467, 755, 776, 1303
Hpy188I	TCNGA	4 cut(s)	364, 563, 924, 1124
Hpy188III	TCNNGA	6 cut(s)	335, 650, 1004, 1117, 1462, 1629
Hpy8I	GTNNAC	5 cut(s)	413, 467, 755, 776, 1303
Hpy99I	CGWCG	4 cut(s)	558, 620, 759, 1157
HpyAV	CCTTC	7 cut(s)	257, 267, 541, 560, 831, 1152, 1420
HpyCH4III	ACNGT	5 cut(s)	319, 620, 683, 1271, 1603
HpyCH4IV	ACGT	5 cut(s)	772, 1000, 1155, 1308, 1530
HpyCH4V	TGCA	2 cut(s)	1415, 1423
HpyF10VI	GCNNNNNNNGC	2 cut(s)	212, 587
HpySE526I	ACGT	5 cut(s)	772, 1000, 1155, 1308, 1530
Hsp92I	GRCGYC	3 cut(s)	391, 1000, 1155
Hsp92II	CATG	3 cut(s)	833, 1298, 1415
HspAI	GCGC	3 cut(s)	391, 1149, 1233
KasI	GGCGCC	1 cut(s)	390
KpnI	GGTACC	1 cut(s)	1222
KroI	GCCGGC	2 cut(s)	890, 1496
KroNI	GCCGGC	2 cut(s)	892, 1498
KspI	CCGCGG	1 cut(s)	397
Kzo9I	GATC	6 cut(s)	112, 931, 1025, 1119, 1558, 1631
LguI	GCTCTTC	1 cut(s)	1397
LmnI	GCTCC	3 cut(s)	123, 277, 840
Lsp1109I	GCAGC	5 cut(s)	44, 77, 436, 508, 961
LweI	GCATC	2 cut(s)	567, 1188
MaeI	CTAG	4 cut(s)	110, 533, 1326, 1431
MaeII	ACGT	5 cut(s)	772, 1000, 1155, 1308, 1530
MaeIII	GTNAC	5 cut(s)	595, 620, 683, 710, 1109
MalI	GATC	6 cut(s)	114, 933, 1027, 1121, 1560, 1633
MboI	GATC	6 cut(s)	112, 931, 1025, 1119, 1558, 1631
MhlI	GDGCHC	2 cut(s)	1522, 1616
MlsI	TGGCCA	1 cut(s)	1353
MluCI	AATT	2 cut(s)	225, 981
MluI	ACGCGT	1 cut(s)	1545
MluNI	TGGCCA	1 cut(s)	1353
Mly113I	GGCGCC	1 cut(s)	391
MlyI	GAGTC	3 cut(s)	179, 760, 1570
Mox20I	TGGCCA	1 cut(s)	1353
MroNI	GCCGGC	2 cut(s)	890, 1496
MscI	TGGCCA	1 cut(s)	1353
MseI	TTAA	2 cut(s)	729, 1485
Msp20I	TGGCCA	1 cut(s)	1353
MspA1I	CMGCKG	2 cut(s)	57, 396
MspI	CCGG	4 cut(s)	187, 891, 1497, 1501
MspR9I	CCNGG	7 cut(s)	175, 188, 327, 691, 809, 1355, 1382
MvaI	CCWGG	6 cut(s)	175, 327, 691, 809, 1355, 1382
MvnI	CGCG	4 cut(s)	129, 396, 1149, 1547
MwoI	GCNNNNNNNGC	2 cut(s)	212, 587
NaeI	GCCGGC	2 cut(s)	892, 1498
NarI	GGCGCC	1 cut(s)	391
NciI	CCSGG	1 cut(s)	188
NdeII	GATC	6 cut(s)	112, 931, 1025, 1119, 1558, 1631
NgoMIV	GCCGGC	2 cut(s)	890, 1496
NheI	GCTAGC	1 cut(s)	1430
NlaIII	CATG	3 cut(s)	833, 1298, 1415
NlaIV	GGNNCC	6 cut(s)	392, 761, 806, 848, 1220, 1283
NmuCI	GTSAC	2 cut(s)	595, 620
NspV	TTCGAA	1 cut(s)	525
PceI	AGGCCT	1 cut(s)	1141
PciSI	GCTCTTC	1 cut(s)	1397
PdiI	GCCGGC	2 cut(s)	892, 1498
PfeI	GAWTC	1 cut(s)	696
PflFI	GACNNNGTC	1 cut(s)	1532
PkrI	GCNGC	6 cut(s)	59, 67, 395, 426, 498, 951
PleI	GAGTC	3 cut(s)	178, 759, 1570
PluTI	GGCGCC	1 cut(s)	394
PpsI	GAGTC	3 cut(s)	178, 759, 1570
PshAI	GACNNNNGTC	1 cut(s)	1508
Psp124BI	GAGCTC	1 cut(s)	1616
Psp6I	CCWGG	6 cut(s)	173, 325, 689, 807, 1353, 1380
PspEI	GGTNACC	2 cut(s)	620, 710
PspFI	CCCAGC	1 cut(s)	945
PspGI	CCWGG	6 cut(s)	173, 325, 689, 807, 1353, 1380
PspN4I	GGNNCC	6 cut(s)	392, 761, 806, 848, 1220, 1283
PspPI	GGNCC	7 cut(s)	606, 760, 805, 811, 1375, 1503, 1534
PsyI	GACNNNGTC	1 cut(s)	1532
PvuII	CAGCTG	1 cut(s)	57
RsaI	GTAC	4 cut(s)	1220, 1451, 1550, 1586
RsaNI	GTAC	4 cut(s)	1219, 1450, 1549, 1585
SacI	GAGCTC	1 cut(s)	1616
SacII	CCGCGG	1 cut(s)	397
SalI	GTCGAC	1 cut(s)	753
SapI	GCTCTTC	1 cut(s)	1397
SaqAI	TTAA	2 cut(s)	729, 1485
SatI	GCNGC	6 cut(s)	58, 66, 394, 425, 497, 950
Sau3AI	GATC	6 cut(s)	112, 931, 1025, 1119, 1558, 1631
Sau96I	GGNCC	7 cut(s)	606, 760, 805, 811, 1375, 1503, 1534
SchI	GAGTC	3 cut(s)	179, 760, 1570
ScrFI	CCNGG	7 cut(s)	175, 188, 327, 691, 809, 1355, 1382
SduI	GDGCHC	2 cut(s)	1522, 1616
SfaNI	GCATC	2 cut(s)	567, 1188
SfcI	CTRYAG	2 cut(s)	12, 1267
SfoI	GGCGCC	1 cut(s)	392
Sfr303I	CCGCGG	1 cut(s)	397
SfuI	TTCGAA	1 cut(s)	525
SgrBI	CCGCGG	1 cut(s)	397
SinI	GGWCC	6 cut(s)	606, 805, 811, 1375, 1503, 1534
SmlI	CTYRAG	1 cut(s)	1580
SmoI	CTYRAG	1 cut(s)	1580
Sse9I	AATT	2 cut(s)	225, 981
SseBI	AGGCCT	1 cut(s)	1141
SsiI	CCGC	7 cut(s)	127, 142, 158, 394, 396, 1378, 1516
SspDI	GGCGCC	1 cut(s)	390
SspI	AATATT	1 cut(s)	1132
SspMI	CTAG	4 cut(s)	110, 533, 1326, 1431
SstI	GAGCTC	1 cut(s)	1616
StuI	AGGCCT	1 cut(s)	1141
StyD4I	CCNGG	7 cut(s)	173, 186, 325, 689, 807, 1353, 1380
StyI	CCWWGG	1 cut(s)	295
TaaI	ACNGT	5 cut(s)	319, 620, 683, 1271, 1603
TaiI	ACGT	5 cut(s)	775, 1003, 1158, 1311, 1533
TaqI	TCGA	8 cut(s)	86, 525, 553, 754, 930, 1014, 1561, 1630
TasI	AATT	2 cut(s)	225, 981
TatI	WGTACW	2 cut(s)	1449, 1584
TauI	GCSGC	1 cut(s)	396
TfiI	GAWTC	1 cut(s)	696
Tru1I	TTAA	2 cut(s)	729, 1485
Tru9I	TTAA	2 cut(s)	729, 1485
TscAI	CASTG	3 cut(s)	206, 1283, 1422
TseFI	GTSAC	2 cut(s)	595, 620
TseI	GCWGC	5 cut(s)	57, 65, 424, 496, 949
Tsp45I	GTSAC	2 cut(s)	595, 620
TspDTI	ATGAA	5 cut(s)	381, 459, 1000, 1311, 1384
TspRI	CASTG	3 cut(s)	206, 1283, 1422
Tth111I	GACNNNGTC	1 cut(s)	1532
VpaK11BI	GGWCC	6 cut(s)	606, 805, 811, 1375, 1503, 1534
XcmI	CCANNNNNNNNNTGG	1 cut(s)	770
XmiI	GTMKAC	2 cut(s)	754, 1302
XspI	CTAG	4 cut(s)	110, 533, 1326, 1431
ZraI	GACGTC	2 cut(s)	1001, 1156

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.