Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0000311

Physical Location & Seq

Genomic Coordinates Reverse (-)

48031790 .. 48033821

Gene Structure 2032 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG300000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGGCAAAGCATTTAGCTCTCGCCTTTTCTCTTTGCTTGCTTGTTCTCTTCCACGGCTGTTTAGCCAGACGCCAACAATCTCAGTCCAGCCAGCAAAATGAGTGCCAGCTGAACCAGATCCAAGCCCGCGAGCCTGACAACCGTATTGAGACTGAAGCAGGTCGGATTGAGTCATGGGACTACAACCAGGATGACTTGCAGTGCGCTGGTGTCGCTGTTCAAAGAATCACCATTGAGCGTAATGGCCTTCACTTGCCTTCTTACACTAACACTCCAAGGCTTGCATACGTTGTACAAGGTAGGGGTCATCTAGGGATGGTATTCCCTGGCTGTCCTGAGACATTTGAGGAGTCTGAGCAATCTGATGAAGAACAACAGGGTCAGCAACAACAATGGCAAGGCCAACAACGGGGCCGCCAGCAACAGGGACGCCGACAAGGACAATTCGGACAGCAAGGCCAACAAGGACAACAAGACTTTGAACAGCTAGACCGACACCAGAGGGTGCGACGTGTCAAAGAAGGTGATGTTATCGCAATCCCCGCCGGAGTCGCAACCTGGTCTCACAACGACGGTGACAGATCTCTTGTTTTTGTTACTCTTTTAGACATCGGCAATAACCACAACCAGCTTGACGAAAACCCAAGGCGATTTTATCTTGCTGGTAACCCACAAGATGAGTTCAACCAACAAGGCCAAAGCCAAAGCCAAAGGAGACAACAAGGACAACAAGGACAACAAGGAAGGAGCAGGCAGCAACGGCAGGGAAACAACAACAACAACATCTATGCCGGCTTCGAGACACAGCTCCTCGCCGACGCTCTCAACATCGACCAACAGACTGCCCAGCAGCTCCAGGGACAGAACGACAACAGGCCACAGATTGTTAGGGTTCAGGGACGTCTCGACTTTGTCGAGCCACCACGGTCACAGAGGGAGGAAAGACAACTGCAAGGACAACAAGGACAACAGGGACAGAATGGCCTTGAGGAGCTATTCTGCCACATGAAGATCAAGCAGAACATCGGCAAGCCTTCATTGGCCGACGTCTTCAGCCCGCAAGCCGGTCGCATCAGCACCCTCAACAGCTTTAGCCTGCCTATTCTCAGGCACCTCCGCCTCAGTGCTGAGAGAGGCTTCTTGTACAACAATGCTATCCACAGCCCACACTGGAACTTGAATGCCCATGAGATCGTCTATGTCATCAGAGGTAGCGCCAGGGTTCAGGTGGTGAACGACAACGGCGAGACCATCTTGGACGACCAGGTCCGCCAGGGACAGCTCTTCGTCGTGCCACAGAACCACGCCGTGTTGCAGAAGGCCATGAGCAACGGATACGAGTACATTGCCTTCAAGACCGATGACAATGCCATGATCAACACTCTGGCTGGCAGGACCTCCGTCCTGCGGGCACTCCCCGACGTGGTCCTCGCCAACGCCTACCAGATGGACCGGGAGCAGGCAAGGAACCTCAAATACAACAGGCAGGAGACCCTTGCCTTGAGCTCCTCAAGGTCTTCCCAGTCACAGAGGTACTGGTGGGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001101 GO:0003006 GO:0003674 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0007275 GO:0008150 GO:0009719 GO:0009725 GO:0009735 GO:0009737 GO:0009791 GO:0009987 GO:0010033 GO:0010154 GO:0010431 GO:0021700 GO:0022414 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0032870 GO:0033095 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045735 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0050896 GO:0051716 GO:0061458 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0071695 GO:0097305 GO:0097306 GO:0097708 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cupin_1

Protein Analysis

515

Amino Acids

58.77

Weight (kDa)

6.91

Isoelectric Point (pI)

63.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cupin_1	PF00190	41 - 224	4.7e-27	Cupin
Cupin_1	PF00190	341 - 488	1e-40	Cupin

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000311)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G03880 AT1G03890 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT4G28520 AT5G44120 AT5G44120 AT5G44120
fragaria_vesca	FvH4_2g21390 FvH4_2g21390 FvH4_2g21400 FvH4_2g21410 FvH4_2g21410 FvH4_2g21410 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21420 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21430 FvH4_2g21440 FvH4_3g19080
malus_domestica	MD01G1024700.v1.1 MD05G1196800.v1.1 MD05G1196900.v1.1 MD17G1078200.v1.1
prunus_persica	Prupe.8G223300_v2.0.a1 Prupe.8G223400_v2.0.a1 Prupe.8G223400_v2.0.a1
pyrus_communis	pycom05g18380 pycom05g18390
rosa_chinensis	RchiOBHm_Chr6g0287991 RchiOBHm_Chr6g0288001 RchiOBHm_Chr6g0288021 RchiOBHm_Chr6g0288031 RchiOBHm_Chr6g0288041 RchiOBHm_Chr6g0288051 RchiOBHm_Chr6g0288071
rosa_laevigata	RLG00000012441 RLG00000012443 RLG00000012444 RLG00000012446 RLG00000012447 RLG00000012448
rosa_multiflora	Rmu_co8147412.1_g000001 Rmu_co8487931.1_g000001 Rmu_co8505755.1_g000001 Rmu_sc0001117.1_g000003 Rmu_sc0001117.1_g000005 Rmu_sc0001117.1_g000011 Rmu_sc0001117.1_g000013 Rmu_sc0005266.1_g000010 Rmu_sc0010960.1_g000004
rosa_roxburghii	Rroxscaffold_3G00252330 Rroxscaffold_7G00180530 Rroxscaffold_7G00180550 Rroxscaffold_7G00180560 Rroxscaffold_7G00180570 Rroxscaffold_7G00180580 Rroxscaffold_7G00180590
rosa_rugosa	Rorug06G0041100 Rorug06G0041200 Rorug06G0041200 Rorug06G0041400 Rorug06G0193700 Rorug06G0193700 Rorug06G0193700 Rorug06G0193800 Rorug06G0193800 Rorug06G0193900 Rorug06G0194000 Rorug06G0194100
rosa_samantha	Rh6AG303300 Rh6AG303400 Rh6AG303500 Rh6AG303700 Rh6AG303800 Rh6AG303900 Rh6AG304100 Rh6AG304200 Rh6BG309500 Rh6BG309600 Rh6BG309700 Rh6BG309900 Rh6BG310000 Rh6BG310100 Rh6BG310200 Rh6CG299600 Rh6CG299800 Rh6CG300000 Rh6CG300200 Rh6CG300300 Rh6CG317100 Rh6CG317300 Rh6CG317500 Rh6CG317700 Rh6CG317800 Rh6CG318200 Rh6DG302000 Rh6DG302100 Rh6DG302300 Rh6DG302500 Rh6DG302600 Rh6DG302700 Rh6DG303100
rosa_wichuraiana	Rw6G026230 Rw6G026240 Rw6G026260 Rw6G026280 Rw6G026300 Rw6G026320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1265
AatII	GACGTC	2 cut(s)	904, 1050
Acc36I	ACCTGC	1 cut(s)	149
AccB1I	GGYRCC	1 cut(s)	1110
AccII	CGCG	1 cut(s)	129
AciI	CCGC	7 cut(s)	127, 415, 543, 1058, 1117, 1270, 1408
AclWI	GGATC	1 cut(s)	112
AcoI	YGGCCR	1 cut(s)	1041
AcuI	CTGAAG	2 cut(s)	174, 1036
AcyI	GRCGYC	4 cut(s)	70, 430, 901, 1047
AdeI	CACNNNGTG	1 cut(s)	1309
AfaI	GTAC	4 cut(s)	294, 1145, 1343, 1535
AfiI	CCNNNNNNNGG	6 cut(s)	409, 424, 1064, 1407, 1423, 1459
AflIII	ACRYGT	1 cut(s)	511
AgsI	TTSAA	5 cut(s)	221, 482, 685, 1180, 1354
AjiI	CACGTC	2 cut(s)	512, 1423
AjnI	CCWGG	7 cut(s)	186, 325, 557, 855, 1217, 1263, 1272
Alw21I	GWGCWC	1 cut(s)	1508
Alw26I	GTCTC	8 cut(s)	143, 332, 567, 709, 794, 908, 1241, 1484
AlwI	GGATC	1 cut(s)	112
AoxI	GGCC	9 cut(s)	244, 400, 412, 457, 694, 875, 982, 1041, 1320
ApeKI	GCWGC	2 cut(s)	754, 850
AspLEI	GCGC	2 cut(s)	206, 1217
AspS9I	GGNCC	5 cut(s)	412, 1267, 1395, 1426, 1450
AsuC2I	CCSGG	1 cut(s)	1454
AsuHPI	GGTGA	4 cut(s)	220, 536, 587, 1243
AvaII	GGWCC	4 cut(s)	1267, 1395, 1426, 1450
BaeGI	GKGCMC	1 cut(s)	1414
BanI	GGYRCC	1 cut(s)	1110
BanII	GRGCYC	1 cut(s)	1508
BarI	GAAGNNNNNNTAC	2 cut(s)	1334, 1366
BbsI	GAAGAC	2 cut(s)	1042, 1509
Bbv12I	GWGCWC	1 cut(s)	1508
BbvI	GCAGC	2 cut(s)	766, 862
BccI	CCATC	3 cut(s)	310, 1259, 1441
BceAI	ACGGC	4 cut(s)	70, 776, 1258, 1292
BcgI	CGANNNNNNTGC	6 cut(s)	1049, 1083, 1328, 1349, 1362, 1383
BciT130I	CCWGG	7 cut(s)	188, 327, 559, 857, 1219, 1265, 1274
BciVI	GTATCC	1 cut(s)	1328
BclI	TGATCA	1 cut(s)	1374
BcnI	CCSGG	1 cut(s)	1454
BcoDI	GTCTC	8 cut(s)	143, 332, 567, 709, 794, 908, 1241, 1484
BfaI	CTAG	2 cut(s)	311, 488
BfoI	RGCGCY	1 cut(s)	1218
BfuAI	ACCTGC	1 cut(s)	149
BfuI	GTATCC	1 cut(s)	1328
BglII	AGATCT	1 cut(s)	581
BisI	GCNGC	3 cut(s)	415, 755, 851
BlsI	GCNGC	3 cut(s)	416, 756, 852
Bme1390I	CCNGG	8 cut(s)	188, 327, 559, 857, 1219, 1265, 1274, 1454
Bme18I	GGWCC	4 cut(s)	1267, 1395, 1426, 1450
BmgBI	CACGTC	2 cut(s)	512, 1423
BmgT120I	GGNCC	5 cut(s)	412, 1267, 1395, 1426, 1450
BmiI	GGNNCC	3 cut(s)	413, 1112, 1469
BmrFI	CCNGG	8 cut(s)	188, 327, 559, 857, 1219, 1265, 1274, 1454
BmrI	ACTGGG	1 cut(s)	1516
BmsI	GCATC	1 cut(s)	1080
BmuI	ACTGGG	1 cut(s)	1516
BoxI	GACNNNNGTC	1 cut(s)	1400
BpiI	GAAGAC	2 cut(s)	1042, 1509
BpmI	CTGGAG	1 cut(s)	839
BpuEI	CTTGAG	3 cut(s)	1007, 1495, 1522
BpuMI	CCSGG	1 cut(s)	1454
BsaHI	GRCGYC	4 cut(s)	70, 430, 901, 1047
BsaI	GGTCTC	3 cut(s)	567, 1241, 1484
BsaJI	CCNNGG	8 cut(s)	52, 275, 325, 644, 856, 923, 1218, 1273
BsaXI	ACNNNNNCTCC	2 cut(s)	256, 286
Bsc4I	CCNNNNNNNGG	6 cut(s)	409, 424, 1064, 1407, 1423, 1459
Bse118I	RCCGGY	2 cut(s)	791, 1064
Bse1I	ACTGG	3 cut(s)	1175, 1522, 1541
Bse3DI	GCAATG	1 cut(s)	1344
BseBI	CCWGG	7 cut(s)	188, 327, 559, 857, 1219, 1265, 1274
BseDI	CCNNGG	8 cut(s)	52, 275, 325, 644, 856, 923, 1218, 1273
BseGI	GGATG	2 cut(s)	196, 321
BseLI	CCNNNNNNNGG	6 cut(s)	409, 424, 1064, 1407, 1423, 1459
BseMI	GCAATG	1 cut(s)	1344
BseMII	CTCAG	6 cut(s)	95, 327, 345, 1119, 1120, 1135
BseNI	ACTGG	3 cut(s)	1175, 1522, 1541
BseRI	GAGGAG	4 cut(s)	362, 800, 1004, 1498
BseSI	GKGCMC	1 cut(s)	1414
BseXI	GCAGC	2 cut(s)	766, 862
BseYI	CCCAGC	1 cut(s)	846
Bsh1236I	CGCG	1 cut(s)	129
Bsh1285I	CGRYCG	1 cut(s)	1069
BshFI	GGCC	9 cut(s)	246, 402, 414, 459, 696, 877, 984, 1043, 1322
BshNI	GGYRCC	1 cut(s)	1110
BsiEI	CGRYCG	1 cut(s)	1069
BsiHKAI	GWGCWC	1 cut(s)	1508
BsiSI	CCGG	4 cut(s)	546, 792, 1065, 1453
BslFI	GGGAC	6 cut(s)	191, 441, 873, 912, 987, 1290
BslI	CCNNNNNNNGG	6 cut(s)	409, 424, 1064, 1407, 1423, 1459
BsmAI	GTCTC	8 cut(s)	143, 332, 567, 709, 794, 908, 1241, 1484
BsmBI	CGTCTC	1 cut(s)	908
BsmFI	GGGAC	6 cut(s)	191, 441, 873, 912, 987, 1290
BsmI	GAATGC	1 cut(s)	1186
BsnI	GGCC	9 cut(s)	246, 402, 414, 459, 696, 877, 984, 1043, 1322
Bso31I	GGTCTC	3 cut(s)	567, 1241, 1484
Bsp1286I	GDGCHC	2 cut(s)	1414, 1508
Bsp1407I	TGTACA	2 cut(s)	292, 1143
Bsp143I	GATC	5 cut(s)	117, 581, 1011, 1191, 1374
BspACI	CCGC	7 cut(s)	127, 415, 543, 1058, 1117, 1270, 1408
BspANI	GGCC	9 cut(s)	246, 402, 414, 459, 696, 877, 984, 1043, 1322
BspCNI	CTCAG	6 cut(s)	94, 328, 346, 1119, 1120, 1134
BspFNI	CGCG	1 cut(s)	129
BspLI	GGNNCC	3 cut(s)	413, 1112, 1469
BspMI	ACCTGC	1 cut(s)	149
BspPI	GGATC	1 cut(s)	112
BspQI	GCTCTTC	1 cut(s)	1289
BspT107I	GGYRCC	1 cut(s)	1110
BspTNI	GGTCTC	3 cut(s)	567, 1241, 1484
BsrDI	GCAATG	1 cut(s)	1344
BsrFI	RCCGGY	2 cut(s)	791, 1064
BsrGI	TGTACA	2 cut(s)	292, 1143
BsrI	ACTGG	3 cut(s)	1175, 1522, 1541
BssAI	RCCGGY	2 cut(s)	791, 1064
BssECI	CCNNGG	8 cut(s)	52, 275, 325, 644, 856, 923, 1218, 1273
BssMI	GATC	5 cut(s)	117, 581, 1011, 1191, 1374
BssNI	GRCGYC	4 cut(s)	70, 430, 901, 1047
BssT1I	CCWWGG	2 cut(s)	275, 644
Bst2UI	CCWGG	7 cut(s)	188, 327, 559, 857, 1219, 1265, 1274
Bst4CI	ACNGT	3 cut(s)	143, 575, 927
Bst6I	CTCTTC	2 cut(s)	53, 1289
BstACI	GRCGYC	4 cut(s)	70, 430, 901, 1047
BstAUI	TGTACA	2 cut(s)	292, 1143
BstDEI	CTNAG	6 cut(s)	81, 336, 354, 1106, 1121, 1128
BstDSI	CCRYGG	2 cut(s)	52, 923
BstEII	GGTNACC	1 cut(s)	665
BstF5I	GGATG	2 cut(s)	196, 321
BstFNI	CGCG	1 cut(s)	129
BstH2I	RGCGCY	1 cut(s)	1218
BstHHI	GCGC	2 cut(s)	206, 1217
BstKTI	GATC	5 cut(s)	120, 584, 1014, 1194, 1377
BstMAI	GTCTC	8 cut(s)	143, 332, 567, 709, 794, 908, 1241, 1484
BstMBI	GATC	5 cut(s)	117, 581, 1011, 1191, 1374
BstMCI	CGRYCG	1 cut(s)	1069
BstMWI	GCNNNNNNNGC	4 cut(s)	212, 542, 551, 760
BstNI	CCWGG	7 cut(s)	188, 327, 559, 857, 1219, 1265, 1274
BstPAI	GACNNNNGTC	1 cut(s)	1400
BstPI	GGTNACC	1 cut(s)	665
BstSCI	CCNGG	8 cut(s)	186, 325, 557, 855, 1217, 1263, 1272, 1452
BstSLI	GKGCMC	1 cut(s)	1414
BstUI	CGCG	1 cut(s)	129
BstV1I	GCAGC	2 cut(s)	766, 862
BstV2I	GAAGAC	2 cut(s)	1042, 1509
BstX2I	RGATCY	2 cut(s)	117, 581
BstYI	RGATCY	2 cut(s)	117, 581
BsuI	GTATCC	1 cut(s)	1328
BsuRI	GGCC	9 cut(s)	246, 402, 414, 459, 696, 877, 984, 1043, 1322
BtgI	CCRYGG	2 cut(s)	52, 923
BtrI	CACGTC	2 cut(s)	512, 1423
BtsCI	GGATG	2 cut(s)	196, 321
BtsI	GCAGTG	1 cut(s)	206
BtsIMutI	CAGTG	3 cut(s)	206, 1129, 1168
BveI	ACCTGC	1 cut(s)	149
CfoI	GCGC	2 cut(s)	206, 1217
Cfr10I	RCCGGY	2 cut(s)	791, 1064
Cfr13I	GGNCC	5 cut(s)	412, 1267, 1395, 1426, 1450
CseI	GACGC	3 cut(s)	78, 438, 827
CsiI	ACCWGGT	2 cut(s)	557, 1263
Csp6I	GTAC	4 cut(s)	293, 1144, 1342, 1534
CviAII	CATG	5 cut(s)	174, 1006, 1187, 1324, 1372
CviQI	GTAC	4 cut(s)	293, 1144, 1342, 1534
DdeI	CTNAG	6 cut(s)	81, 336, 354, 1106, 1121, 1128
DpnI	GATC	5 cut(s)	119, 583, 1013, 1193, 1376
DpnII	GATC	5 cut(s)	117, 581, 1011, 1191, 1374
DraIII	CACNNNGTG	1 cut(s)	1309
DrdI	GACNNNNNNGTC	1 cut(s)	1265
DseDI	GACNNNNNNGTC	1 cut(s)	1265
EaeI	YGGCCR	1 cut(s)	1041
Eam1104I	CTCTTC	2 cut(s)	53, 1289
EarI	CTCTTC	2 cut(s)	53, 1289
EciI	GGCGGA	2 cut(s)	1106, 1259
Ecl136II	GAGCTC	1 cut(s)	1506
Eco130I	CCWWGG	2 cut(s)	275, 644
Eco24I	GRGCYC	1 cut(s)	1508
Eco31I	GGTCTC	3 cut(s)	567, 1241, 1484
Eco47I	GGWCC	4 cut(s)	1267, 1395, 1426, 1450
Eco53kI	GAGCTC	1 cut(s)	1506
Eco57I	CTGAAG	2 cut(s)	174, 1036
Eco91I	GGTNACC	1 cut(s)	665
EcoICRI	GAGCTC	1 cut(s)	1506
EcoO109I	RGGNCCY	1 cut(s)	1395
EcoO65I	GGTNACC	1 cut(s)	665
EcoRII	CCWGG	7 cut(s)	186, 325, 557, 855, 1217, 1263, 1272
EcoT14I	CCWWGG	2 cut(s)	275, 644
EcoT38I	GRGCYC	1 cut(s)	1508
ErhI	CCWWGG	2 cut(s)	275, 644
Esp3I	CGTCTC	1 cut(s)	908
FaeI	CATG	5 cut(s)	177, 1009, 1190, 1327, 1375
FaiI	YATR	8 cut(s)	175, 286, 789, 1007, 1188, 1200, 1325, 1373
FaqI	GGGAC	6 cut(s)	191, 441, 873, 912, 987, 1290
FatI	CATG	5 cut(s)	173, 1005, 1186, 1323, 1371
FauI	CCCGC	4 cut(s)	134, 550, 1065, 1401
FbaI	TGATCA	1 cut(s)	1374
Fnu4HI	GCNGC	3 cut(s)	415, 755, 851
FokI	GGATG	2 cut(s)	203, 328
FriOI	GRGCYC	1 cut(s)	1508
Fsp4HI	GCNGC	3 cut(s)	415, 755, 851
FspBI	CTAG	2 cut(s)	311, 488
GlaI	GCGC	2 cut(s)	205, 1216
GluI	GCNGC	3 cut(s)	415, 755, 851
GsaI	CCCAGC	1 cut(s)	850
GsuI	CTGGAG	1 cut(s)	839
HaeII	RGCGCY	1 cut(s)	1218
HaeIII	GGCC	9 cut(s)	246, 402, 414, 459, 696, 877, 984, 1043, 1322
HapII	CCGG	4 cut(s)	546, 792, 1065, 1453
HgaI	GACGC	3 cut(s)	78, 438, 827
HhaI	GCGC	2 cut(s)	206, 1217
Hin1I	GRCGYC	4 cut(s)	70, 430, 901, 1047
Hin1II	CATG	5 cut(s)	177, 1009, 1190, 1327, 1375
Hin6I	GCGC	2 cut(s)	204, 1215
HinP1I	GCGC	2 cut(s)	204, 1215
HinfI	GANTC	4 cut(s)	170, 225, 350, 549
HpaII	CCGG	4 cut(s)	546, 792, 1065, 1453
HphI	GGTGA	4 cut(s)	220, 536, 587, 1243
Hpy166II	GTNNAC	1 cut(s)	1234
Hpy188I	TCNGA	5 cut(s)	165, 355, 364, 449, 1208
Hpy188III	TCNNGA	4 cut(s)	335, 799, 905, 1354
Hpy8I	GTNNAC	1 cut(s)	1234
Hpy99I	CGWCG	6 cut(s)	513, 575, 821, 1049, 1292, 1424
HpyAV	CCTTC	7 cut(s)	257, 267, 515, 738, 1044, 1312, 1360
HpyCH4III	ACNGT	3 cut(s)	143, 575, 927
HpyCH4IV	ACGT	5 cut(s)	288, 511, 901, 1047, 1422
HpyCH4V	TGCA	4 cut(s)	199, 284, 952, 1315
HpyF10VI	GCNNNNNNNGC	4 cut(s)	212, 542, 551, 760
HpyF3I	CTNAG	6 cut(s)	81, 336, 354, 1106, 1121, 1128
HpySE526I	ACGT	5 cut(s)	288, 511, 901, 1047, 1422
Hsp92I	GRCGYC	4 cut(s)	70, 430, 901, 1047
Hsp92II	CATG	5 cut(s)	177, 1009, 1190, 1327, 1375
HspAI	GCGC	2 cut(s)	204, 1215
KroI	GCCGGC	1 cut(s)	791
KroNI	GCCGGC	1 cut(s)	793
Ksp22I	TGATCA	1 cut(s)	1374
Kzo9I	GATC	5 cut(s)	117, 581, 1011, 1191, 1374
LguI	GCTCTTC	1 cut(s)	1289
LmnI	GCTCC	6 cut(s)	747, 813, 858, 991, 1456, 1511
Lsp1109I	GCAGC	2 cut(s)	766, 862
LweI	GCATC	1 cut(s)	1080
MabI	ACCWGGT	2 cut(s)	557, 1263
MaeI	CTAG	2 cut(s)	311, 488
MaeII	ACGT	5 cut(s)	288, 511, 901, 1047, 1422
MaeIII	GTNAC	5 cut(s)	575, 595, 665, 927, 1524
MalI	GATC	5 cut(s)	119, 583, 1013, 1193, 1376
MboI	GATC	5 cut(s)	117, 581, 1011, 1191, 1374
MboII	GAAGA	6 cut(s)	40, 380, 1021, 1042, 1276, 1509
MflI	RGATCY	2 cut(s)	117, 581
MhlI	GDGCHC	2 cut(s)	1414, 1508
MluCI	AATT	1 cut(s)	443
MlyI	GAGTC	3 cut(s)	179, 359, 558
MmeI	TCCRAC	1 cut(s)	143
MroNI	GCCGGC	1 cut(s)	791
MspA1I	CMGCKG	1 cut(s)	109
MspI	CCGG	4 cut(s)	546, 792, 1065, 1453
MspR9I	CCNGG	8 cut(s)	188, 327, 559, 857, 1219, 1265, 1274, 1454
Mva1269I	GAATGC	1 cut(s)	1186
MvaI	CCWGG	7 cut(s)	188, 327, 559, 857, 1219, 1265, 1274
MvnI	CGCG	1 cut(s)	129
MwoI	GCNNNNNNNGC	4 cut(s)	212, 542, 551, 760
NaeI	GCCGGC	1 cut(s)	793
NciI	CCSGG	1 cut(s)	1454
NdeII	GATC	5 cut(s)	117, 581, 1011, 1191, 1374
NgoMIV	GCCGGC	1 cut(s)	791
NlaIII	CATG	5 cut(s)	177, 1009, 1190, 1327, 1375
NlaIV	GGNNCC	3 cut(s)	413, 1112, 1469
NmuCI	GTSAC	3 cut(s)	575, 927, 1524
PciSI	GCTCTTC	1 cut(s)	1289
PcsI	WCGNNNNNNNCGW	2 cut(s)	912, 1242
PctI	GAATGC	1 cut(s)	1186
PdiI	GCCGGC	1 cut(s)	793
PfeI	GAWTC	1 cut(s)	225
PflFI	GACNNNGTC	3 cut(s)	911, 1265, 1424
PkrI	GCNGC	3 cut(s)	416, 756, 852
PleI	GAGTC	3 cut(s)	178, 358, 557
PpsI	GAGTC	3 cut(s)	178, 358, 557
PpuMI	RGGWCCY	1 cut(s)	1395
PshAI	GACNNNNGTC	1 cut(s)	1400
Psp124BI	GAGCTC	1 cut(s)	1508
Psp5II	RGGWCCY	1 cut(s)	1395
Psp6I	CCWGG	7 cut(s)	186, 325, 557, 855, 1217, 1263, 1272
PspEI	GGTNACC	1 cut(s)	665
PspFI	CCCAGC	1 cut(s)	846
PspGI	CCWGG	7 cut(s)	186, 325, 557, 855, 1217, 1263, 1272
PspN4I	GGNNCC	3 cut(s)	413, 1112, 1469
PspPI	GGNCC	5 cut(s)	412, 1267, 1395, 1426, 1450
PspPPI	RGGWCCY	1 cut(s)	1395
PsrI	GAACNNNNNNTAC	2 cut(s)	1460, 1492
PsuI	RGATCY	2 cut(s)	117, 581
PsyI	GACNNNGTC	3 cut(s)	911, 1265, 1424
PvuII	CAGCTG	1 cut(s)	109
RsaI	GTAC	4 cut(s)	294, 1145, 1343, 1535
RsaNI	GTAC	4 cut(s)	293, 1144, 1342, 1534
SacI	GAGCTC	1 cut(s)	1508
SapI	GCTCTTC	1 cut(s)	1289
SatI	GCNGC	3 cut(s)	415, 755, 851
Sau3AI	GATC	5 cut(s)	117, 581, 1011, 1191, 1374
Sau96I	GGNCC	5 cut(s)	412, 1267, 1395, 1426, 1450
SchI	GAGTC	3 cut(s)	179, 359, 558
ScrFI	CCNGG	8 cut(s)	188, 327, 559, 857, 1219, 1265, 1274, 1454
SduI	GDGCHC	2 cut(s)	1414, 1508
SexAI	ACCWGGT	2 cut(s)	557, 1263
SfaNI	GCATC	1 cut(s)	1080
SinI	GGWCC	4 cut(s)	1267, 1395, 1426, 1450
SmlI	CTYRAG	3 cut(s)	986, 1501, 1510
SmoI	CTYRAG	3 cut(s)	986, 1501, 1510
Sse9I	AATT	1 cut(s)	443
SsiI	CCGC	7 cut(s)	127, 415, 543, 1058, 1117, 1270, 1408
SspMI	CTAG	2 cut(s)	311, 488
SstI	GAGCTC	1 cut(s)	1508
StyD4I	CCNGG	8 cut(s)	186, 325, 557, 855, 1217, 1263, 1272, 1452
StyI	CCWWGG	2 cut(s)	275, 644
TaaI	ACNGT	3 cut(s)	143, 575, 927
TaiI	ACGT	5 cut(s)	291, 514, 904, 1050, 1425
TaqI	TCGA	4 cut(s)	798, 831, 906, 915
TaqII	GACCGA	2 cut(s)	507, 1373
TasI	AATT	1 cut(s)	443
TatI	WGTACW	3 cut(s)	292, 1143, 1341
TauI	GCSGC	1 cut(s)	417
TfiI	GAWTC	1 cut(s)	225
TscAI	CASTG	3 cut(s)	206, 1129, 1175
TseFI	GTSAC	3 cut(s)	575, 927, 1524
TseI	GCWGC	2 cut(s)	754, 850
Tsp45I	GTSAC	3 cut(s)	575, 927, 1524
TspDTI	ATGAA	3 cut(s)	381, 1022, 1026
TspGWI	ACGGA	2 cut(s)	1347, 1390
TspRI	CASTG	3 cut(s)	206, 1129, 1175
Tth111I	GACNNNGTC	3 cut(s)	911, 1265, 1424
VpaK11BI	GGWCC	4 cut(s)	1267, 1395, 1426, 1450
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1225
XspI	CTAG	2 cut(s)	311, 488
ZraI	GACGTC	2 cut(s)	902, 1048

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.