AT4G11373
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
6913984 .. 6919763
5780 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G11373.1

Sequence Viewer

Length: 342 bp
ATGAAATACATTGAGAGAGGTCGTAAGATTGATGAGAATGTGGCGAGAGAAATTATCAATCATAGATCCCTTAGGCATCTTAATATCATTCGATTCAAGGAGGTGGTTCTAACTCCAACTCATCTTGCAATTGAAATGGAGTATGCTTCTAGAGGAGAGCTCTTTGAAAGAATCTGTAATGCTAGTAGATTCAGTGAAGCTGAGCTGATTTGTGGCGTGGACTACTGTCATTCACTGTTGCAGAGTGGGAATAAGCTCCGCGTGTTTTGGTGTCAACTTGTTGTCCTAGTTTTTAGTTTTGTTTCAGTTAGTTCCTGCAATTTCTCTTTCACGTATTTGTAA

Protein Analysis

113

Amino Acids

13.21

Weight (kDa)

8.34

Isoelectric Point (pI)

46.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 8 - 78 1.2e-09 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 261
AciI CCGC 1 cut(s) 259
AclWI GGATC 1 cut(s) 60
AgsI TTSAA 3 cut(s) 97, 134, 167
AluBI AGCT 4 cut(s) 160, 200, 205, 256
AluI AGCT 4 cut(s) 160, 200, 205, 256
Alw21I GWGCWC 1 cut(s) 162
AlwI GGATC 1 cut(s) 60
AxyI CCTNAGG 1 cut(s) 71
BanII GRGCYC 1 cut(s) 162
Bbv12I GWGCWC 1 cut(s) 162
BfaI CTAG 3 cut(s) 150, 183, 287
BlpI GCTNAGC 1 cut(s) 201
BmsI GCATC 1 cut(s) 85
BoxI GACNNNNGTC 1 cut(s) 225
BplI GAGNNNNNCTC 2 cut(s) 144, 176
Bpu1102I GCTNAGC 1 cut(s) 201
BsaAI YACGTR 1 cut(s) 333
Bse21I CCTNAGG 1 cut(s) 71
BseMII CTCAG 1 cut(s) 192
BseRI GAGGAG 1 cut(s) 168
Bsh1236I CGCG 1 cut(s) 261
BsiHKAI GWGCWC 1 cut(s) 162
Bsp1286I GDGCHC 1 cut(s) 162
Bsp143I GATC 1 cut(s) 65
Bsp1720I GCTNAGC 1 cut(s) 201
BspACI CCGC 1 cut(s) 259
BspCNI CTCAG 1 cut(s) 193
BspFNI CGCG 1 cut(s) 261
BspPI GGATC 1 cut(s) 60
BssMI GATC 1 cut(s) 65
Bst4CI ACNGT 2 cut(s) 227, 237
BstBAI YACGTR 1 cut(s) 333
BstDEI CTNAG 2 cut(s) 71, 201
BstFNI CGCG 1 cut(s) 261
BstKTI GATC 1 cut(s) 68
BstMBI GATC 1 cut(s) 65
BstPAI GACNNNNGTC 1 cut(s) 225
BstUI CGCG 1 cut(s) 261
BstX2I RGATCY 1 cut(s) 65
BstYI RGATCY 1 cut(s) 65
Bsu36I CCTNAGG 1 cut(s) 71
BtsIMutI CAGTG 2 cut(s) 199, 233
CviJI RGCY 4 cut(s) 160, 200, 205, 256
CviKI_1 RGCY 4 cut(s) 160, 200, 205, 256
DdeI CTNAG 2 cut(s) 71, 201
DpnI GATC 1 cut(s) 67
DpnII GATC 1 cut(s) 65
Ecl136II GAGCTC 1 cut(s) 160
Eco24I GRGCYC 1 cut(s) 162
Eco53kI GAGCTC 1 cut(s) 160
Eco81I CCTNAGG 1 cut(s) 71
EcoICRI GAGCTC 1 cut(s) 160
EcoT38I GRGCYC 1 cut(s) 162
FaiI YATR 2 cut(s) 63, 144
FriOI GRGCYC 1 cut(s) 162
FspBI CTAG 3 cut(s) 150, 183, 287
HincII GTYRAC 1 cut(s) 275
HindII GTYRAC 1 cut(s) 275
HinfI GANTC 3 cut(s) 93, 171, 189
Hpy166II GTNNAC 2 cut(s) 220, 275
Hpy188III TCNNGA 1 cut(s) 150
Hpy8I GTNNAC 2 cut(s) 220, 275
HpyCH4III ACNGT 2 cut(s) 227, 237
HpyCH4IV ACGT 1 cut(s) 332
HpyCH4V TGCA 3 cut(s) 128, 241, 318
HpyF3I CTNAG 2 cut(s) 71, 201
HpySE526I ACGT 1 cut(s) 332
Kzo9I GATC 1 cut(s) 65
LmnI GCTCC 1 cut(s) 261
LpnPI CCDG 1 cut(s) 328
LweI GCATC 1 cut(s) 85
MaeI CTAG 3 cut(s) 150, 183, 287
MaeII ACGT 1 cut(s) 332
MalI GATC 1 cut(s) 67
MboI GATC 1 cut(s) 65
MfeI CAATTG 1 cut(s) 129
MflI RGATCY 1 cut(s) 65
MhlI GDGCHC 1 cut(s) 162
MluCI AATT 3 cut(s) 51, 129, 319
MmeI TCCRAC 1 cut(s) 140
MnlI CCTC 3 cut(s) 11, 94, 146
MseI TTAA 1 cut(s) 81
MunI CAATTG 1 cut(s) 129
MvnI CGCG 1 cut(s) 261
NdeII GATC 1 cut(s) 65
PfeI GAWTC 3 cut(s) 93, 171, 189
Ppu21I YACGTR 1 cut(s) 333
PshAI GACNNNNGTC 1 cut(s) 225
Psp124BI GAGCTC 1 cut(s) 162
PsuI RGATCY 1 cut(s) 65
SacI GAGCTC 1 cut(s) 162
SaqAI TTAA 1 cut(s) 81
Sau3AI GATC 1 cut(s) 65
SduI GDGCHC 1 cut(s) 162
SetI ASST 7 cut(s) 22, 105, 162, 202, 207, 258, 335
SfaNI GCATC 1 cut(s) 85
Sse9I AATT 3 cut(s) 51, 129, 319
SsiI CCGC 1 cut(s) 259
SspMI CTAG 3 cut(s) 150, 183, 287
SstI GAGCTC 1 cut(s) 162
TaaI ACNGT 2 cut(s) 227, 237
TaiI ACGT 1 cut(s) 335
TaqI TCGA 1 cut(s) 91
TasI AATT 3 cut(s) 51, 129, 319
TfiI GAWTC 3 cut(s) 93, 171, 189
Tru1I TTAA 1 cut(s) 81
Tru9I TTAA 1 cut(s) 81
TscAI CASTG 2 cut(s) 199, 240
TspDTI ATGAA 1 cut(s) 17
TspRI CASTG 2 cut(s) 199, 240
XbaI TCTAGA 1 cut(s) 149
XspI CTAG 3 cut(s) 150, 183, 287
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.