Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000306

Physical Location & Seq

Genomic Coordinates Reverse (-)

6507576 .. 6512801

Gene Structure 5226 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G19330.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2133 bp

ATGGACCAACAACCGGAGAGGCGAGAAGGCCGGAGTTTTCCGGAGCGTAAAGGACAGAAGCGGAAGCTAGAGGAAGGAGCCGCCGCCGTAGAAGATCGAGAGATCTCTGCCGTCAGCACCGACGGAGGCCAAGCGCTTCTTAGCGAGGTTGCTGCTCAAGTCTCGGTACTAAACTCTGCCTTCTCTTGGCAAGAGTCCGATCGCGCTGCTGCCAAGCGAGCCACTCAAGTTCTGGCTGAGCTAGCCAAAAACGAGGATTTAGTGAACGTGATTGTCGACGGAGGTGCTGTTCCAGCTCTTATGACGCATCTACAGGCGCCACCATACAACGACGGGGACTTGGCTGAGAAGCCGTACGAACACGAAGTTGAGAAGGGAAGCGCTTTTGCGCTTGGTCTTCTTGCTATTAAGCCAGAGTATCAGAAACTGATAGTAGACAAAGGTGCCTTACCTCATTTAGTGAATTTGTTGAAGAGAAACAAAGATGGTTCTAGCTCTCGAGCTGTGAATAGTGTTATCAGAAGAGCGGCTGATGCCATCACCAATCTTGCTCATGAGAACAGCAGTATCAAGACCCGTGTTAGGGTAGAAGGCGGTATTCCACCTCTCGTGGAGTTGCTTGAATTTTCTGATTCAAAGGTCCAGAGAGCAGCAGCAGGGGCATTGAGAACCCTTGCATTTAAAAATGATGATAACAAGAATCAGATAGTTGAATGCAATGCTCTTCCCACACTTATTCTAATGCTAGGATCAGAGGATGCTGCTATACATTATGAAGCGGTTGGAGTTATAGGCAATCTAGTACACTCGTCTCCACACATTAAAAAAGAGGTTCTTACTGCCGGGGCGTTGCAACCTGTCATTGGTCTTCTTAGCTCCTGTTGCCCTGAGAGTCAAAGAGAGGCGGCTTTATTACTTGGGCAGTTTGCCTCAACTGATTCTGATTGTAAGGTGCACATTGTGCAAAGGGGTGCTGTCCGTCCTTTAATTGAGATGCTTCAGTCCCCGGATGTCCAGTTGAAGGAAATGTCGGCCTTTGCACTGGGTAGATTGGCACAGGATGCCCACAATCAAGCTGGTATTGCCCATAGTGGTGGTTTAGGACCTTTATTGAAGCTTCTCGATTCAAGAAATGGATCATTGCAACACAATGCTGCATTTGCTCTTTATGGCCTTGCCGATAATGAGGATAATGTGTCAGATTTTATCAGGGTGGGAGGTATCCAAAAGCTACAGGATGGAGAGTTTATTGTTCAAGCAACTAAAGATTGTGTTTCCAAAACACTAAAGAGATTGGAGGAGAAGATTCATGGAAGAGTTCTGAGACATCTGTTGTACCTAATGCGCATTTCAGAGAAGTCTATCCAAAGACGAGTTGCTCTTGCCCTTGCTCATCTCTGTTCACCCGAGGATCAACGAACCATATTCATAGATGACAACGGGTTGGAGTTGCTACTCGGTCTTCTTGGTTCTTTAAACACTAAGCAGCAACTTGACGGTGCAGCAGCGTTGTACAAATTAGCAAATAAATCTATGGCACTTTCTCCAGTTGATGCTGCTCCTCCTTCTCCAACACAAAGGGTTTATCTCGGAGAGCAATATGTAAATAATGCTACGCTGTCTGATGTAACCTTTCTAGTCGAAGGAAGGACATTCTATGCACACAGAATTTGTCTGCTGGCATCCTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTACAGAGAAAAAGACGCTAGAGATATTGAGATTCCAAATATCAAATGGGAGGTGTTTGAGTTAATGATGAGGTTTATATACACTGGATCTGTCGACATAACAAATGAGATATCAAAAGATCTTCTAAGAGCAGCGGATCAGTATCTCTTGGAGGGCCTGAAACGACTCTGTGAATACACAATTGCTCAGGATATTACGTTGGAAAGTATAGGAGACATGTACGAGCTATCAGAAGCATTCCATGCGATGTCGCTGAGGCAAGCTTGTATCATGTTCATCCTGGAGCATTTCGATAAACTGAGTTCAATGCCTTGGCAGAACGAGCTGGTGCAGAGAACAATACCAGAGATAAGAGAGTACTTTTGTAGAGCCCTAACAAAGTCTACTACAAACCTGCAAAGCTTGAGGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005886 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006725 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008156 GO:0008285 GO:0009058 GO:0009059 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010029 GO:0010033 GO:0010187 GO:0010556 GO:0010558 GO:0010605 GO:0016020 GO:0019219 GO:0019222 GO:0031261 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0032993 GO:0033993 GO:0034641 GO:0034645 GO:0042127 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0048580 GO:0048581 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0080090 GO:0090304 GO:0090329 GO:0097305 GO:1900140 GO:1901360 GO:1901576 GO:1901700 GO:2000026 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm BTB

Protein Analysis

710

Amino Acids

78.19

Weight (kDa)

5.8

Isoelectric Point (pI)

42.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	136 - 389	3.5e-19	ARMC5
ARM_PUB	PF25598	178 - 364	1.5e-06	Plant U-box protein ARM repeat region
Arm	PF00514	195 - 227	3.3e-07	Armadillo/beta-catenin-like repeat
Arm	PF00514	230 - 269	6.7e-07	Armadillo/beta-catenin-like repeat
BTB	PF00651	516 - 588	3.7e-13	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19330
fragaria_vesca	FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica	MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica	Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis	pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis	RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata	RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora	Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii	Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa	Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha	Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana	Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1346
Acc36I	ACCTGC	1 cut(s)	2121
AccB1I	GGYRCC	2 cut(s)	316, 443
AccBSI	CCGCTC	1 cut(s)	527
AccI	GTMKAC	4 cut(s)	276, 435, 1812, 2102
AccII	CGCG	1 cut(s)	204
AccIII	TCCGGA	1 cut(s)	40
AciI	CCGC	8 cut(s)	61, 81, 84, 527, 594, 779, 905, 1853
AclWI	GGATC	5 cut(s)	757, 1144, 1419, 1813, 1863
AcsI	RAATTY	3 cut(s)	463, 623, 1668
AcuI	CTGAAG	1 cut(s)	983
AcyI	GRCGYC	1 cut(s)	317
AdeI	CACNNNGTG	1 cut(s)	961
AfaI	GTAC	7 cut(s)	168, 356, 804, 1337, 1514, 1940, 2078
AfeI	AGCGCT	2 cut(s)	135, 382
AfiI	CCNNNNNNNGG	6 cut(s)	13, 186, 582, 583, 863, 1021
AflIII	ACRYGT	1 cut(s)	1935
AgsI	TTSAA	9 cut(s)	472, 623, 636, 713, 1021, 1114, 1128, 1256, 2025
AjnI	CCWGG	1 cut(s)	1998
AloI	GAACNNNNNNTCC	2 cut(s)	273, 305
Alw21I	GWGCWC	1 cut(s)	957
Alw26I	GTCTC	4 cut(s)	166, 816, 1318, 1926
Alw44I	GTGCAC	1 cut(s)	953
AlwI	GGATC	5 cut(s)	757, 1144, 1419, 1813, 1863
AlwNI	CAGNNNCTG	1 cut(s)	427
Ama87I	CYCGRG	2 cut(s)	498, 1406
Aor13HI	TCCGGA	1 cut(s)	40
Aor51HI	AGCGCT	2 cut(s)	135, 382
AoxI	GGCC	5 cut(s)	28, 127, 1032, 1171, 1873
ApaLI	GTGCAC	1 cut(s)	953
ApoI	RAATTY	3 cut(s)	463, 623, 1668
AspLEI	GCGC	6 cut(s)	136, 206, 319, 383, 391, 1347
AspS9I	GGNCC	4 cut(s)	4, 640, 1103, 1873
AsuC2I	CCSGG	2 cut(s)	844, 1007
AsuHPI	GGTGA	2 cut(s)	532, 1395
AsuNHI	GCTAGC	1 cut(s)	241
AvaI	CYCGRG	2 cut(s)	498, 1406
AvaII	GGWCC	3 cut(s)	4, 640, 1103
BaeGI	GKGCMC	1 cut(s)	957
BaeI	ACNNNNGTAYC	2 cut(s)	550, 583
BanI	GGYRCC	2 cut(s)	316, 443
BanII	GRGCYC	1 cut(s)	2092
BauI	CACGAG	1 cut(s)	608
BbsI	GAAGAC	3 cut(s)	389, 860, 1454
Bbv12I	GWGCWC	1 cut(s)	957
BbvCI	CCTCAGC	1 cut(s)	1973
BccI	CCATC	4 cut(s)	479, 545, 1232, 1706
BceAI	ACGGC	3 cut(s)	71, 95, 337
BcgI	CGANNNNNNTGC	6 cut(s)	134, 168, 188, 222, 266, 300
BciT130I	CCWGG	1 cut(s)	2000
BciVI	GTATCC	1 cut(s)	1232
BcnI	CCSGG	2 cut(s)	844, 1007
BcoDI	GTCTC	4 cut(s)	166, 816, 1318, 1926
BfaI	CTAG	7 cut(s)	68, 242, 492, 746, 800, 1637, 1737
BfmI	CTRYAG	2 cut(s)	311, 1232
BfoI	RGCGCY	3 cut(s)	137, 320, 384
BfuAI	ACCTGC	1 cut(s)	2121
BfuI	GTATCC	1 cut(s)	1232
BglII	AGATCT	2 cut(s)	102, 1837
BlpI	GCTNAGC	1 cut(s)	237
BmcAI	AGTACT	1 cut(s)	2078
Bme1390I	CCNGG	3 cut(s)	844, 1007, 2000
Bme18I	GGWCC	3 cut(s)	4, 640, 1103
BmeT110I	CYCGRG	2 cut(s)	498, 1406
BmgT120I	GGNCC	4 cut(s)	4, 640, 1103, 1873
BmiI	GGNNCC	3 cut(s)	79, 318, 445
BmrFI	CCNGG	3 cut(s)	844, 1007, 2000
BmrI	ACTGGG	1 cut(s)	1052
BmsI	GCATC	8 cut(s)	316, 523, 748, 984, 1051, 1543, 1681, 1691
BmtI	GCTAGC	1 cut(s)	245
BmuI	ACTGGG	1 cut(s)	1052
BpiI	GAAGAC	3 cut(s)	389, 860, 1454
BpmI	CTGGAG	2 cut(s)	1530, 2021
Bpu10I	CCTNAGC	2 cut(s)	1905, 1973
Bpu1102I	GCTNAGC	1 cut(s)	237
BpuEI	CTTGAG	2 cut(s)	141, 210
BpuMI	CCSGG	2 cut(s)	844, 1007
BsaBI	GATNNNNATC	1 cut(s)	1860
BsaHI	GRCGYC	1 cut(s)	317
BsaJI	CCNNGG	4 cut(s)	843, 1005, 1407, 2030
BsaWI	WCCGGW	2 cut(s)	13, 40
BsaXI	ACNNNNNCTCC	2 cut(s)	273, 303
Bsc4I	CCNNNNNNNGG	6 cut(s)	13, 186, 582, 583, 863, 1021
Bse1I	ACTGG	4 cut(s)	1015, 1047, 1547, 1807
Bse3DI	GCAATG	3 cut(s)	724, 1139, 1710
Bse8I	GATNNNNATC	1 cut(s)	1860
BseAI	TCCGGA	1 cut(s)	40
BseBI	CCWGG	1 cut(s)	2000
BseDI	CCNNGG	4 cut(s)	843, 1005, 1407, 2030
BseGI	GGATG	6 cut(s)	763, 1015, 1066, 1243, 1682, 1995
BseJI	GATNNNNATC	1 cut(s)	1860
BseLI	CCNNNNNNNGG	6 cut(s)	13, 186, 582, 583, 863, 1021
BseMI	GCAATG	3 cut(s)	724, 1139, 1710
BseMII	CTCAG	8 cut(s)	228, 336, 879, 1313, 1701, 1919, 1964, 2009
BseNI	ACTGG	4 cut(s)	1015, 1047, 1547, 1807
BseRI	GAGGAG	2 cut(s)	1313, 1551
BseSI	GKGCMC	1 cut(s)	957
BsgI	GTGCAG	2 cut(s)	1521, 2069
Bsh1236I	CGCG	1 cut(s)	204
Bsh1285I	CGRYCG	1 cut(s)	202
BshFI	GGCC	5 cut(s)	30, 129, 1034, 1173, 1875
BshNI	GGYRCC	2 cut(s)	316, 443
BsiEI	CGRYCG	1 cut(s)	202
BsiHKAI	GWGCWC	1 cut(s)	957
BsiHKCI	CYCGRG	2 cut(s)	498, 1406
BsiSI	CCGG	5 cut(s)	14, 31, 41, 843, 1007
BsiWI	CGTACG	1 cut(s)	354
BslFI	GGGAC	2 cut(s)	350, 988
BslI	CCNNNNNNNGG	6 cut(s)	13, 186, 582, 583, 863, 1021
BsmAI	GTCTC	4 cut(s)	166, 816, 1318, 1926
BsmBI	CGTCTC	1 cut(s)	816
BsmFI	GGGAC	2 cut(s)	350, 988
BsmI	GAATGC	2 cut(s)	719, 1955
BsnI	GGCC	5 cut(s)	30, 129, 1034, 1173, 1875
BsoBI	CYCGRG	2 cut(s)	498, 1406
Bsp1286I	GDGCHC	2 cut(s)	957, 2092
Bsp13I	TCCGGA	1 cut(s)	40
Bsp1407I	TGTACA	1 cut(s)	1512
Bsp143I	GATC	9 cut(s)	94, 102, 199, 749, 1136, 1411, 1805, 1837, 1855
Bsp1720I	GCTNAGC	1 cut(s)	237
BspACI	CCGC	8 cut(s)	61, 81, 84, 527, 594, 779, 905, 1853
BspANI	GGCC	5 cut(s)	30, 129, 1034, 1173, 1875
BspCNI	CTCAG	8 cut(s)	229, 337, 880, 1314, 1700, 1918, 1965, 2010
BspEI	TCCGGA	1 cut(s)	40
BspFNI	CGCG	1 cut(s)	204
BspHI	TCATGA	1 cut(s)	553
BspLI	GGNNCC	3 cut(s)	79, 318, 445
BspMI	ACCTGC	1 cut(s)	2121
BspOI	GCTAGC	1 cut(s)	245
BspPI	GGATC	5 cut(s)	757, 1144, 1419, 1813, 1863
BspQI	GCTCTTC	2 cut(s)	517, 729
BspT107I	GGYRCC	2 cut(s)	316, 443
BsrBI	CCGCTC	1 cut(s)	527
BsrDI	GCAATG	3 cut(s)	724, 1139, 1710
BsrGI	TGTACA	1 cut(s)	1512
BsrI	ACTGG	4 cut(s)	1015, 1047, 1547, 1807
BssECI	CCNNGG	4 cut(s)	843, 1005, 1407, 2030
BssMI	GATC	9 cut(s)	94, 102, 199, 749, 1136, 1411, 1805, 1837, 1855
BssNI	GRCGYC	1 cut(s)	317
BssSI	CACGAG	1 cut(s)	608
BssT1I	CCWWGG	1 cut(s)	2030
Bst2BI	CACGAG	1 cut(s)	608
Bst2UI	CCWGG	1 cut(s)	2000
Bst4CI	ACNGT	1 cut(s)	1499
Bst6I	CTCTTC	4 cut(s)	467, 517, 729, 1309
BstACI	GRCGYC	1 cut(s)	317
BstAPI	GCANNNNNTGC	4 cut(s)	961, 1061, 1700, 1961
BstAUI	TGTACA	1 cut(s)	1512
BstC8I	GCNNGC	4 cut(s)	219, 243, 1680, 1980
BstF5I	GGATG	6 cut(s)	763, 1015, 1066, 1243, 1682, 1995
BstFNI	CGCG	1 cut(s)	204
BstH2I	RGCGCY	3 cut(s)	137, 320, 384
BstHHI	GCGC	6 cut(s)	136, 206, 319, 383, 391, 1347
BstKTI	GATC	9 cut(s)	97, 105, 202, 752, 1139, 1414, 1808, 1840, 1858
BstMAI	GTCTC	4 cut(s)	166, 816, 1318, 1926
BstMBI	GATC	9 cut(s)	94, 102, 199, 749, 1136, 1411, 1805, 1837, 1855
BstMCI	CGRYCG	1 cut(s)	202
BstNI	CCWGG	1 cut(s)	2000
BstNSI	RCATGY	1 cut(s)	1939
BstSCI	CCNGG	3 cut(s)	842, 1005, 1998
BstSFI	CTRYAG	2 cut(s)	311, 1232
BstSLI	GKGCMC	1 cut(s)	957
BstUI	CGCG	1 cut(s)	204
BstV2I	GAAGAC	3 cut(s)	389, 860, 1454
BstX2I	RGATCY	3 cut(s)	102, 1805, 1837
BstXI	CCANNNNNNTGG	1 cut(s)	1094
BstYI	RGATCY	3 cut(s)	102, 1805, 1837
BsuI	GTATCC	1 cut(s)	1232
BsuRI	GGCC	5 cut(s)	30, 129, 1034, 1173, 1875
BtgZI	GCGATG	1 cut(s)	1979
BtsCI	GGATG	6 cut(s)	763, 1015, 1066, 1243, 1682, 1995
BtsIMutI	CAGTG	2 cut(s)	1040, 1800
BveI	ACCTGC	1 cut(s)	2121
Cac8I	GCNNGC	4 cut(s)	219, 243, 1680, 1980
CaiI	CAGNNNCTG	1 cut(s)	427
CciI	TCATGA	1 cut(s)	553
CfoI	GCGC	6 cut(s)	136, 206, 319, 383, 391, 1347
Cfr13I	GGNCC	4 cut(s)	4, 640, 1103, 1873
CseI	GACGC	2 cut(s)	313, 1742
Csp6I	GTAC	7 cut(s)	167, 355, 803, 1336, 1513, 1939, 2077
CviAII	CATG	5 cut(s)	554, 1310, 1936, 1961, 1990
CviQI	GTAC	7 cut(s)	167, 355, 803, 1336, 1513, 1939, 2077
DinI	GGCGCC	1 cut(s)	318
DpnI	GATC	9 cut(s)	96, 104, 201, 751, 1138, 1413, 1807, 1839, 1857
DpnII	GATC	9 cut(s)	94, 102, 199, 749, 1136, 1411, 1805, 1837, 1855
DraI	TTTAAA	2 cut(s)	682, 1476
DraIII	CACNNNGTG	1 cut(s)	961
Eam1104I	CTCTTC	4 cut(s)	467, 517, 729, 1309
EarI	CTCTTC	4 cut(s)	467, 517, 729, 1309
Eco130I	CCWWGG	1 cut(s)	2030
Eco24I	GRGCYC	1 cut(s)	2092
Eco32I	GATATC	1 cut(s)	1830
Eco47I	GGWCC	3 cut(s)	4, 640, 1103
Eco47III	AGCGCT	2 cut(s)	135, 382
Eco57I	CTGAAG	1 cut(s)	983
Eco88I	CYCGRG	2 cut(s)	498, 1406
EcoO109I	RGGNCCY	2 cut(s)	1103, 1873
EcoRII	CCWGG	1 cut(s)	1998
EcoRV	GATATC	1 cut(s)	1830
EcoT14I	CCWWGG	1 cut(s)	2030
EcoT22I	ATGCAT	1 cut(s)	1696
EcoT38I	GRGCYC	1 cut(s)	2092
EgeI	GGCGCC	1 cut(s)	318
EheI	GGCGCC	1 cut(s)	318
ErhI	CCWWGG	1 cut(s)	2030
Esp3I	CGTCTC	1 cut(s)	816
FaeI	CATG	5 cut(s)	557, 1313, 1939, 1964, 1993
FalI	AAGNNNNNCTT	4 cut(s)	123, 155, 819, 851
FaqI	GGGAC	2 cut(s)	350, 988
FatI	CATG	5 cut(s)	553, 1309, 1935, 1960, 1989
FblI	GTMKAC	4 cut(s)	276, 435, 1812, 2102
FokI	GGATG	6 cut(s)	770, 1022, 1073, 1250, 1669, 1982
FriOI	GRGCYC	1 cut(s)	2092
FspAI	RTGCGCAY	1 cut(s)	1346
FspBI	CTAG	7 cut(s)	68, 242, 492, 746, 800, 1637, 1737
FspI	TGCGCA	1 cut(s)	1346
GlaI	GCGC	6 cut(s)	135, 205, 318, 382, 390, 1346
GsuI	CTGGAG	2 cut(s)	1530, 2021
HaeII	RGCGCY	3 cut(s)	137, 320, 384
HaeIII	GGCC	5 cut(s)	30, 129, 1034, 1173, 1875
HapII	CCGG	5 cut(s)	14, 31, 41, 843, 1007
HgaI	GACGC	2 cut(s)	313, 1742
HhaI	GCGC	6 cut(s)	136, 206, 319, 383, 391, 1347
Hin1I	GRCGYC	1 cut(s)	317
Hin1II	CATG	5 cut(s)	557, 1313, 1939, 1964, 1993
Hin6I	GCGC	6 cut(s)	134, 204, 317, 381, 389, 1345
HinP1I	GCGC	6 cut(s)	134, 204, 317, 381, 389, 1345
HincII	GTYRAC	2 cut(s)	277, 1813
HindII	GTYRAC	2 cut(s)	277, 1813
HindIII	AAGCTT	3 cut(s)	1115, 1980, 2119
HinfI	GANTC	9 cut(s)	194, 632, 700, 892, 938, 1124, 1306, 1750, 1884
HpaII	CCGG	5 cut(s)	14, 31, 41, 843, 1007
HphI	GGTGA	2 cut(s)	532, 1395
Hpy166II	GTNNAC	8 cut(s)	265, 277, 436, 805, 955, 1403, 1813, 2103
Hpy188III	TCNNGA	9 cut(s)	41, 98, 498, 554, 571, 643, 1121, 1128, 1907
Hpy8I	GTNNAC	8 cut(s)	265, 277, 436, 805, 955, 1403, 1813, 2103
Hpy99I	CGWCG	3 cut(s)	125, 281, 335
HpyAV	CCTTC	9 cut(s)	20, 68, 190, 367, 584, 1015, 1575, 1637, 1641
HpyCH4III	ACNGT	1 cut(s)	1499
HpyCH4IV	ACGT	2 cut(s)	267, 1916
HpySE526I	ACGT	2 cut(s)	267, 1916
Hsp92I	GRCGYC	1 cut(s)	317
Hsp92II	CATG	5 cut(s)	557, 1313, 1939, 1964, 1993
HspAI	GCGC	6 cut(s)	134, 204, 317, 381, 389, 1345
KasI	GGCGCC	1 cut(s)	316
Kpn2I	TCCGGA	1 cut(s)	40
Kzo9I	GATC	9 cut(s)	94, 102, 199, 749, 1136, 1411, 1805, 1837, 1855
LguI	GCTCTTC	2 cut(s)	517, 729
LmnI	GCTCC	5 cut(s)	43, 77, 881, 1564, 2002
LweI	GCATC	8 cut(s)	316, 523, 748, 984, 1051, 1543, 1681, 1691
MaeI	CTAG	7 cut(s)	68, 242, 492, 746, 800, 1637, 1737
MaeII	ACGT	2 cut(s)	267, 1916
MaeIII	GTNAC	2 cut(s)	1627, 1718
MalI	GATC	9 cut(s)	96, 104, 201, 751, 1138, 1413, 1807, 1839, 1857
MbiI	CCGCTC	1 cut(s)	527
MboI	GATC	9 cut(s)	94, 102, 199, 749, 1136, 1411, 1805, 1837, 1855
MfeI	CAATTG	1 cut(s)	1899
MflI	RGATCY	3 cut(s)	102, 1805, 1837
MhlI	GDGCHC	2 cut(s)	957, 2092
MluCI	AATT	6 cut(s)	463, 623, 987, 1517, 1668, 1899
Mly113I	GGCGCC	1 cut(s)	317
MlyI	GAGTC	3 cut(s)	203, 901, 1878
MmeI	TCCRAC	4 cut(s)	763, 1425, 1595, 1899
Mph1103I	ATGCAT	1 cut(s)	1696
MroI	TCCGGA	1 cut(s)	40
MseI	TTAA	6 cut(s)	408, 681, 822, 986, 1475, 1781
MslI	CAYNNNNRTG	1 cut(s)	1092
MspA1I	CMGCKG	1 cut(s)	1853
MspI	CCGG	5 cut(s)	14, 31, 41, 843, 1007
MspR9I	CCNGG	3 cut(s)	844, 1007, 2000
MunI	CAATTG	1 cut(s)	1899
Mva1269I	GAATGC	2 cut(s)	719, 1955
MvaI	CCWGG	1 cut(s)	2000
MvnI	CGCG	1 cut(s)	204
NarI	GGCGCC	1 cut(s)	317
NciI	CCSGG	2 cut(s)	844, 1007
NdeII	GATC	9 cut(s)	94, 102, 199, 749, 1136, 1411, 1805, 1837, 1855
NheI	GCTAGC	1 cut(s)	241
NlaIII	CATG	5 cut(s)	557, 1313, 1939, 1964, 1993
NlaIV	GGNNCC	3 cut(s)	79, 318, 445
NsbI	TGCGCA	1 cut(s)	1346
NsiI	ATGCAT	1 cut(s)	1696
NspI	RCATGY	1 cut(s)	1939
PaeR7I	CTCGAG	1 cut(s)	498
PagI	TCATGA	1 cut(s)	553
PciI	ACATGT	1 cut(s)	1935
PciSI	GCTCTTC	2 cut(s)	517, 729
PcsI	WCGNNNNNNNCGW	1 cut(s)	273
PctI	GAATGC	2 cut(s)	719, 1955
PfeI	GAWTC	6 cut(s)	632, 700, 938, 1124, 1306, 1750
Pfl23II	CGTACG	1 cut(s)	354
PfoI	TCCNGGA	1 cut(s)	1998
Ple19I	CGATCG	1 cut(s)	202
PleI	GAGTC	3 cut(s)	202, 900, 1878
PluTI	GGCGCC	1 cut(s)	320
PpsI	GAGTC	3 cut(s)	202, 900, 1878
PpuMI	RGGWCCY	1 cut(s)	1103
PscI	ACATGT	1 cut(s)	1935
Psp5II	RGGWCCY	1 cut(s)	1103
Psp6I	CCWGG	1 cut(s)	1998
PspGI	CCWGG	1 cut(s)	1998
PspLI	CGTACG	1 cut(s)	354
PspN4I	GGNNCC	3 cut(s)	79, 318, 445
PspPI	GGNCC	4 cut(s)	4, 640, 1103, 1873
PspPPI	RGGWCCY	1 cut(s)	1103
PstNI	CAGNNNCTG	1 cut(s)	427
PsuI	RGATCY	3 cut(s)	102, 1805, 1837
PvuI	CGATCG	1 cut(s)	202
RsaI	GTAC	7 cut(s)	168, 356, 804, 1337, 1514, 1940, 2078
RsaNI	GTAC	7 cut(s)	167, 355, 803, 1336, 1513, 1939, 2077
RseI	CAYNNNNRTG	1 cut(s)	1092
SalI	GTCGAC	2 cut(s)	275, 1811
SapI	GCTCTTC	2 cut(s)	517, 729
SaqAI	TTAA	6 cut(s)	408, 681, 822, 986, 1475, 1781
Sau3AI	GATC	9 cut(s)	94, 102, 199, 749, 1136, 1411, 1805, 1837, 1855
Sau96I	GGNCC	4 cut(s)	4, 640, 1103, 1873
ScaI	AGTACT	1 cut(s)	2078
SchI	GAGTC	3 cut(s)	203, 901, 1878
ScrFI	CCNGG	3 cut(s)	844, 1007, 2000
SduI	GDGCHC	2 cut(s)	957, 2092
SfaNI	GCATC	8 cut(s)	316, 523, 748, 984, 1051, 1543, 1681, 1691
SfcI	CTRYAG	2 cut(s)	311, 1232
SfoI	GGCGCC	1 cut(s)	318
Sfr274I	CTCGAG	1 cut(s)	498
SinI	GGWCC	3 cut(s)	4, 640, 1103
SlaI	CTCGAG	1 cut(s)	498
SmiMI	CAYNNNNRTG	1 cut(s)	1092
SmlI	CTYRAG	4 cut(s)	156, 225, 498, 2122
SmoI	CTYRAG	4 cut(s)	156, 225, 498, 2122
Sse9I	AATT	6 cut(s)	463, 623, 987, 1517, 1668, 1899
SsiI	CCGC	8 cut(s)	61, 81, 84, 527, 594, 779, 905, 1853
SspDI	GGCGCC	1 cut(s)	316
SspMI	CTAG	7 cut(s)	68, 242, 492, 746, 800, 1637, 1737
StyD4I	CCNGG	3 cut(s)	842, 1005, 1998
StyI	CCWWGG	1 cut(s)	2030
TaaI	ACNGT	1 cut(s)	1499
TaiI	ACGT	2 cut(s)	270, 1919
TaqI	TCGA	7 cut(s)	97, 276, 499, 1122, 1641, 1812, 2010
TaqII	GACCGA	1 cut(s)	1448
TasI	AATT	6 cut(s)	463, 623, 987, 1517, 1668, 1899
TatI	WGTACW	3 cut(s)	802, 1512, 2076
TauI	GCSGC	4 cut(s)	83, 86, 530, 908
TfiI	GAWTC	6 cut(s)	632, 700, 938, 1124, 1306, 1750
Tru1I	TTAA	6 cut(s)	408, 681, 822, 986, 1475, 1781
Tru9I	TTAA	6 cut(s)	408, 681, 822, 986, 1475, 1781
TscAI	CASTG	2 cut(s)	1047, 1807
TspDTI	ATGAA	4 cut(s)	789, 1298, 1417, 1984
TspGWI	ACGGA	3 cut(s)	138, 294, 968
TspRI	CASTG	2 cut(s)	1047, 1807
VneI	GTGCAC	1 cut(s)	953
VpaK11BI	GGWCC	3 cut(s)	4, 640, 1103
XapI	RAATTY	3 cut(s)	463, 623, 1668
XceI	RCATGY	1 cut(s)	1939
XcmI	CCANNNNNNNNNTGG	3 cut(s)	229, 1073, 1761
XhoI	CTCGAG	1 cut(s)	498
XmiI	GTMKAC	4 cut(s)	276, 435, 1812, 2102
XspI	CTAG	7 cut(s)	68, 242, 492, 746, 800, 1637, 1737
ZrmI	AGTACT	1 cut(s)	2078
Zsp2I	ATGCAT	1 cut(s)	1696

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.