Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000306

Physical Location & Seq

Genomic Coordinates Forward (+)

40331326 .. 40336731

Gene Structure 5406 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1284800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGGAACGCTCTCAGGCGCGAACCGTCACTACCAGAAGAGGGTTGAAGCGGAAGCTCGAAGAAGACTTCAGAGATGAGAGGATCGAGGGCGAACCAGACCGGAAAGTCCCGGCCGTCGTCGAACTGCAAGACGATCGGCCGGATCTCGTCGCCCGGGTTCGCGAGCAGGTCCGGATTCTGGAGTCCAAATTCTCGTCCGCGCAGCCCGACCGCCTCCTTGCGAAGCAGGCCGCCCATGGCCTTGCTCTCACCGCCAAAGAAGAGGAGCTTGTGGACATCGTGGTGGACTGTGGAGCAGTTCCGGCGCTTGTTAAGCATCTGCAGGCGCCTCCGCCGGCGACAGACGGCCGAAAAAGCCCGATCCCGTACGAGCACGAGGTCGAGAAATACTGTGCTTATGCCCTGGGGTTTATTGCCATTAAGCCGGAGTATCAACAACTCGTGGTTGATGCCGGAGCTTTACCGCATCTTGTTGATCTGCTAAAAAGGCACAAGTGGGGAAGTGACTCACCGGCACCTGATGCTGTGATCAGGAGAGCTTGTGATACAATTGCTCACCTTGCCCATGAAAATAGCAACATTAAGAACCTTGTCAGGATTGAAGGTGGAATTCCTCCTCTTGTTCAACTGCTTAACTTCTTCGACACAAAGGTACAGATAGCGGCTGCAGGGGCCCTTCGGACTCTGGCATTTAAAAATGATGAAAACAAGAACCAGATTGTAGTAGAGTGCAATGCTTTGCCTACCCTGGTACTAATGCTTCGATCTGAGGATCCTGTGATGTCTTTTGAAGCGGTTGGTGTAATAGGCAATCTTGTCCACTCATCCCCACACATCAAGAAATTAGTACTTCTTGCTGGTGCTTTACAACCTATTATTGGATTGCTCAGTTCTGAATGTACTGAGAGCCAAAGAGAAGCTGCTTTATTACTTGGCCAGTTTGCTGCAGCTGATACAGATTGCAAGGCACACATTGCTCAGAGGGGTGCTTTAAAACCGTTAATTGAGATGCTTAAGTCACCTGATGCACAGGTTCAGGAGATGTCAGCCTTTACGCTTGGGAGGTTGGCACAGGACATACATAACCAAGCTGGCATTGCTCACAATGGTGGTATAATGCCTCTAATCAAGCTTCTTGATTCAAAAAACATCTCTCTGCAACATAATGCTGCATTTTGTCTATATGGTCTTGCAGATAATGAGGATAACACTGCAACTATAATAAAGTTTGGAGGTGTTCAGAAATTCCAAGATGGAGTATTCGTTGCTCAACAAACCAAGGAATGCGTGGCAAAGTCATTGAAAAGACTAGAGGAGAAGATTTGTGGACAAGTATTAAACCATCTGTTATATATGATGAGGGTTGCAGATAAGGCCACTCGAAGAAGAGTGGCTTTGGCTCTTGCTCATCTTTGCAACCCTAGTGACAGCGAAAGCATTTTTATTTCTAACAAAGGATTAGAGTTGCTTTTAGGGCTTCTTAAGTCTCTGCAGTATAAGGAGAAACATGATGGTTCTTTGGCCTTGTACAAATTGGCTACAAAAGTCACTTCACTCGCTCGCATGGATGCAGCTCCTCCATCACCCTCCCCACAGGTGTATTTGGGTGAGCAATACGTAAACAATCCTACCCTTTCCGACATCACATTCTTAGTTGAAGGTAAACGGTTCTATGCCCACAGAATTTGTTTGCGTGCCTCATCTGATGCATTCCGTGCCATGTTTGACGGTGGTTACAGAGAGAGAGATGCAAAGGACATAGTGATTCCAAATATTAGATGGGAAGCCTTTGAATTGATGATGAGATTCATGTACACGGGATCGGTAGATGTCACTTTGGATATAGCTCAGGATCTCCTCAGAGCTGCTGATCAGTATCTTTTGGAGGGCCTCAAGCGGCTCTGCGAGCATGCCATTGCTCAGGACATCTGCGTGGAAAATCTTTCGCTCATGTTTGAGTTATCGGAGGCCTTCAACGCCATGTCGTTACAGCAAGCATGCATTCTATTTCTACTGGAGCAATTTGAGGAATTGGTTGAGAAACCATGGTATCCGACGTTGGTGGACCGTGTGATACCAGACATTTGCACATTTTTTACTAATGCGCTTAAGATGCCAATCGAGGCAACCTCGCAGCAGCAGCAGGAGGCAATGGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008156 GO:0008285 GO:0009058 GO:0009059 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0019219 GO:0019222 GO:0031261 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0032993 GO:0034641 GO:0034645 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0060255 GO:0065007 GO:0070013 GO:0071704 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

ko04340 ko04341 map04340 map04341

Pfam Domains

Protein Families

Arm BTB

Protein Analysis

720

Amino Acids

79.86

Weight (kDa)

5.97

Isoelectric Point (pI)

50.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	136 - 391	1.5e-16	ARMC5
ARM_PUB	PF25598	180 - 376	7.1e-07	Plant U-box protein ARM repeat region
Arm	PF00514	195 - 230	3.3e-06	Armadillo/beta-catenin-like repeat
Arm	PF00514	236 - 273	2.3e-06	Armadillo/beta-catenin-like repeat
BTB	PF00651	541 - 641	3.7e-24	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19330
fragaria_vesca	FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica	MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica	Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis	pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis	RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata	RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora	Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii	Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa	Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha	Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana	Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	104
Acc36I	ACCTGC	1 cut(s)	157
AccB1I	GGYRCC	2 cut(s)	325, 514
AccII	CGCG	3 cut(s)	19, 162, 200
AccIII	TCCGGA	1 cut(s)	171
AclWI	GGATC	7 cut(s)	89, 150, 355, 767, 780, 1828, 1860
AcoI	YGGCCR	4 cut(s)	111, 137, 346, 934
AcsI	RAATTY	4 cut(s)	188, 609, 1244, 1683
AcuI	CTGAAG	1 cut(s)	52
AcyI	GRCGYC	1 cut(s)	326
AfaI	GTAC	7 cut(s)	368, 654, 753, 849, 901, 1529, 1814
AfiI	CCNNNNNNNGG	3 cut(s)	39, 178, 878
AflII	CTTAAG	3 cut(s)	1013, 1481, 2108
AgsI	TTSAA	9 cut(s)	46, 602, 626, 791, 1143, 1303, 1658, 1793, 1975
AjnI	CCWGG	2 cut(s)	402, 747
AleI	CACNNNNGTG	1 cut(s)	1107
Alw21I	GWGCWC	1 cut(s)	375
Alw26I	GTCTC	1 cut(s)	1491
AlwI	GGATC	7 cut(s)	89, 150, 355, 767, 780, 1828, 1860
Ama87I	CYCGRG	1 cut(s)	153
Aor13HI	TCCGGA	1 cut(s)	171
ApaI	GGGCCC	1 cut(s)	676
ApoI	RAATTY	4 cut(s)	188, 609, 1244, 1683
AspLEI	GCGC	5 cut(s)	19, 202, 307, 328, 2107
AspS9I	GGNCC	5 cut(s)	169, 672, 673, 1888, 2065
AsuC2I	CCSGG	3 cut(s)	110, 154, 155
AsuHPI	GGTGA	6 cut(s)	241, 501, 548, 1011, 1575, 1619
AvaI	CYCGRG	1 cut(s)	153
AvaII	GGWCC	2 cut(s)	169, 2065
BaeGI	GKGCMC	1 cut(s)	676
BaeI	ACNNNNGTAYC	2 cut(s)	2033, 2066
BalI	TGGCCA	1 cut(s)	936
BamHI	GGATCC	1 cut(s)	772
BanI	GGYRCC	2 cut(s)	325, 514
BanII	GRGCYC	1 cut(s)	676
BarI	GAAGNNNNNNTAC	2 cut(s)	744, 776
BauI	CACGAG	2 cut(s)	374, 440
BbsI	GAAGAC	1 cut(s)	69
Bbv12I	GWGCWC	1 cut(s)	375
BccI	CCATC	5 cut(s)	1247, 1350, 1505, 1588, 1773
BceAI	ACGGC	2 cut(s)	98, 361
BcgI	CGANNNNNNTGC	2 cut(s)	116, 150
BciT130I	CCWGG	2 cut(s)	404, 749
BciVI	GTATCC	1 cut(s)	2061
BclI	TGATCA	2 cut(s)	528, 1870
BcnI	CCSGG	3 cut(s)	110, 154, 155
BcoDI	GTCTC	1 cut(s)	1491
BfaI	CTAG	2 cut(s)	1310, 1422
BfmI	CTRYAG	4 cut(s)	320, 666, 945, 1490
BfoI	RGCGCY	2 cut(s)	308, 329
BfrI	CTTAAG	3 cut(s)	1013, 1481, 2108
BfuAI	ACCTGC	1 cut(s)	157
BfuI	GTATCC	1 cut(s)	2061
BmcAI	AGTACT	1 cut(s)	849
Bme1390I	CCNGG	5 cut(s)	110, 154, 155, 404, 749
Bme18I	GGWCC	2 cut(s)	169, 2065
BmeT110I	CYCGRG	1 cut(s)	153
BmgT120I	GGNCC	5 cut(s)	169, 672, 673, 1888, 2065
BmiI	GGNNCC	5 cut(s)	327, 516, 673, 674, 774
BmrFI	CCNGG	5 cut(s)	110, 154, 155, 404, 749
BpiI	GAAGAC	1 cut(s)	69
BplI	GAGNNNNNCTC	2 cut(s)	2114, 2146
BpmI	CTGGAG	2 cut(s)	200, 2036
Bpu10I	CCTNAGC	2 cut(s)	1848, 1920
BpuEI	CTTGAG	1 cut(s)	1877
BpuMI	CCSGG	3 cut(s)	110, 154, 155
BsaAI	YACGTR	1 cut(s)	1618
BsaBI	GATNNNNATC	2 cut(s)	1875, 2117
BsaHI	GRCGYC	1 cut(s)	326
BsaJI	CCNNGG	7 cut(s)	153, 235, 402, 403, 747, 1278, 2045
BsaWI	WCCGGW	2 cut(s)	99, 171
BsaXI	ACNNNNNCTCC	4 cut(s)	526, 556, 1248, 1278
Bsc4I	CCNNNNNNNGG	3 cut(s)	39, 178, 878
Bse118I	RCCGGY	2 cut(s)	334, 511
Bse1I	ACTGG	2 cut(s)	937, 2019
Bse3DI	GCAATG	5 cut(s)	739, 972, 1095, 1914, 2157
Bse8I	GATNNNNATC	2 cut(s)	1875, 2117
BseAI	TCCGGA	1 cut(s)	171
BseBI	CCWGG	2 cut(s)	404, 749
BseDI	CCNNGG	7 cut(s)	153, 235, 402, 403, 747, 1278, 2045
BseGI	GGATG	2 cut(s)	824, 1573
BseJI	GATNNNNATC	2 cut(s)	1875, 2117
BseLI	CCNNNNNNNGG	3 cut(s)	39, 178, 878
BseMI	GCAATG	5 cut(s)	739, 972, 1095, 1914, 2157
BseMII	CTCAG	8 cut(s)	26, 759, 894, 901, 992, 1862, 1873, 1934
BseNI	ACTGG	2 cut(s)	937, 2019
BseRI	GAGGAG	5 cut(s)	278, 606, 1328, 1566, 1847
BseSI	GKGCMC	1 cut(s)	676
BseX3I	CGGCCG	3 cut(s)	111, 137, 346
Bsh1236I	CGCG	3 cut(s)	19, 162, 200
Bsh1285I	CGRYCG	5 cut(s)	114, 136, 140, 211, 349
BshNI	GGYRCC	2 cut(s)	325, 514
BsiEI	CGRYCG	5 cut(s)	114, 136, 140, 211, 349
BsiHKAI	GWGCWC	1 cut(s)	375
BsiHKCI	CYCGRG	1 cut(s)	153
BsiWI	CGTACG	1 cut(s)	366
BslFI	GGGAC	1 cut(s)	92
BslI	CCNNNNNNNGG	3 cut(s)	39, 178, 878
BsmAI	GTCTC	1 cut(s)	1491
BsmFI	GGGAC	1 cut(s)	92
BsmI	GAATGC	3 cut(s)	1289, 1709, 2001
BsoBI	CYCGRG	1 cut(s)	153
Bsp120I	GGGCCC	1 cut(s)	672
Bsp1286I	GDGCHC	2 cut(s)	375, 676
Bsp13I	TCCGGA	1 cut(s)	171
Bsp1407I	TGTACA	2 cut(s)	1527, 1812
Bsp19I	CCATGG	2 cut(s)	235, 2045
Bsp68I	TCGCGA	1 cut(s)	162
BspCNI	CTCAG	8 cut(s)	25, 760, 895, 900, 991, 1861, 1872, 1933
BspEI	TCCGGA	1 cut(s)	171
BspFNI	CGCG	3 cut(s)	19, 162, 200
BspLI	GGNNCC	5 cut(s)	327, 516, 673, 674, 774
BspMAI	CTGCAG	4 cut(s)	324, 670, 949, 1494
BspMI	ACCTGC	1 cut(s)	157
BspPI	GGATC	7 cut(s)	89, 150, 355, 767, 780, 1828, 1860
BspT107I	GGYRCC	2 cut(s)	325, 514
BspTI	CTTAAG	3 cut(s)	1013, 1481, 2108
BsrDI	GCAATG	5 cut(s)	739, 972, 1095, 1914, 2157
BsrFI	RCCGGY	2 cut(s)	334, 511
BsrGI	TGTACA	2 cut(s)	1527, 1812
BsrI	ACTGG	2 cut(s)	937, 2019
BssAI	RCCGGY	2 cut(s)	334, 511
BssECI	CCNNGG	7 cut(s)	153, 235, 402, 403, 747, 1278, 2045
BssNI	GRCGYC	1 cut(s)	326
BssSI	CACGAG	2 cut(s)	374, 440
BssT1I	CCWWGG	3 cut(s)	235, 1278, 2045
Bst2BI	CACGAG	2 cut(s)	374, 440
Bst2UI	CCWGG	2 cut(s)	404, 749
Bst4CI	ACNGT	7 cut(s)	25, 290, 392, 999, 1668, 1730, 2069
Bst6I	CTCTTC	3 cut(s)	31, 255, 1381
BstACI	GRCGYC	1 cut(s)	326
BstAFI	CTTAAG	3 cut(s)	1013, 1481, 2108
BstAPI	GCANNNNNTGC	3 cut(s)	521, 974, 1715
BstAUI	TGTACA	2 cut(s)	1527, 1812
BstBAI	YACGTR	1 cut(s)	1618
BstDEI	CTNAG	9 cut(s)	12, 768, 887, 903, 978, 1651, 1848, 1859, 1920
BstDSI	CCRYGG	2 cut(s)	235, 2045
BstF5I	GGATG	2 cut(s)	824, 1573
BstFNI	CGCG	3 cut(s)	19, 162, 200
BstH2I	RGCGCY	2 cut(s)	308, 329
BstHHI	GCGC	5 cut(s)	19, 202, 307, 328, 2107
BstMAI	GTCTC	1 cut(s)	1491
BstMCI	CGRYCG	5 cut(s)	114, 136, 140, 211, 349
BstNI	CCWGG	2 cut(s)	404, 749
BstNSI	RCATGY	2 cut(s)	1913, 2001
BstSCI	CCNGG	5 cut(s)	108, 152, 153, 402, 747
BstSFI	CTRYAG	4 cut(s)	320, 666, 945, 1490
BstSLI	GKGCMC	1 cut(s)	676
BstSNI	TACGTA	1 cut(s)	1618
BstUI	CGCG	3 cut(s)	19, 162, 200
BstV2I	GAAGAC	1 cut(s)	69
BstX2I	RGATCY	3 cut(s)	142, 772, 1852
BstYI	RGATCY	3 cut(s)	142, 772, 1852
BstZI	CGGCCG	3 cut(s)	111, 137, 346
BsuI	GTATCC	1 cut(s)	2061
BtgI	CCRYGG	2 cut(s)	235, 2045
BtsCI	GGATG	2 cut(s)	824, 1573
BtsI	GCAGTG	1 cut(s)	1209
BtsIMutI	CAGTG	1 cut(s)	1209
BtuMI	TCGCGA	1 cut(s)	162
BveI	ACCTGC	1 cut(s)	157
CfoI	GCGC	5 cut(s)	19, 202, 307, 328, 2107
Cfr10I	RCCGGY	2 cut(s)	334, 511
Cfr13I	GGNCC	5 cut(s)	169, 672, 673, 1888, 2065
Cfr9I	CCCGGG	1 cut(s)	153
Csp6I	GTAC	7 cut(s)	367, 653, 752, 848, 900, 1528, 1813
CspCI	CAANNNNNGTGG	2 cut(s)	1667, 1702
CviQI	GTAC	7 cut(s)	367, 653, 752, 848, 900, 1528, 1813
DdeI	CTNAG	9 cut(s)	12, 768, 887, 903, 978, 1651, 1848, 1859, 1920
DinI	GGCGCC	1 cut(s)	327
DraI	TTTAAA	2 cut(s)	694, 993
DrdI	GACNNNNNNGTC	1 cut(s)	104
DseDI	GACNNNNNNGTC	1 cut(s)	104
EaeI	YGGCCR	4 cut(s)	111, 137, 346, 934
EagI	CGGCCG	3 cut(s)	111, 137, 346
Eam1104I	CTCTTC	3 cut(s)	31, 255, 1381
EarI	CTCTTC	3 cut(s)	31, 255, 1381
EciI	GGCGGA	1 cut(s)	321
EclXI	CGGCCG	3 cut(s)	111, 137, 346
Eco105I	TACGTA	1 cut(s)	1618
Eco130I	CCWWGG	3 cut(s)	235, 1278, 2045
Eco147I	AGGCCT	1 cut(s)	1970
Eco24I	GRGCYC	1 cut(s)	676
Eco47I	GGWCC	2 cut(s)	169, 2065
Eco52I	CGGCCG	3 cut(s)	111, 137, 346
Eco57I	CTGAAG	1 cut(s)	52
Eco88I	CYCGRG	1 cut(s)	153
EcoO109I	RGGNCCY	3 cut(s)	672, 673, 1888
EcoRI	GAATTC	1 cut(s)	609
EcoRII	CCWGG	2 cut(s)	402, 747
EcoT14I	CCWWGG	3 cut(s)	235, 1278, 2045
EcoT22I	ATGCAT	2 cut(s)	1711, 2003
EcoT38I	GRGCYC	1 cut(s)	676
EgeI	GGCGCC	1 cut(s)	327
EheI	GGCGCC	1 cut(s)	327
ErhI	CCWWGG	3 cut(s)	235, 1278, 2045
FalI	AAGNNNNNCTT	4 cut(s)	252, 284, 1378, 1410
FaqI	GGGAC	1 cut(s)	92
FbaI	TGATCA	2 cut(s)	528, 1870
FokI	GGATG	2 cut(s)	811, 1580
FriOI	GRGCYC	1 cut(s)	676
FspBI	CTAG	2 cut(s)	1310, 1422
GlaI	GCGC	5 cut(s)	18, 201, 306, 327, 2106
GsuI	CTGGAG	2 cut(s)	200, 2036
HaeII	RGCGCY	2 cut(s)	308, 329
HhaI	GCGC	5 cut(s)	19, 202, 307, 328, 2107
Hin1I	GRCGYC	1 cut(s)	326
Hin6I	GCGC	5 cut(s)	17, 200, 305, 326, 2105
HinP1I	GCGC	5 cut(s)	17, 200, 305, 326, 2105
HindIII	AAGCTT	1 cut(s)	1130
HinfI	GANTC	7 cut(s)	175, 182, 506, 682, 1139, 1765, 1806
HphI	GGTGA	6 cut(s)	241, 501, 548, 1011, 1575, 1619
Hpy166II	GTNNAC	8 cut(s)	274, 286, 820, 1328, 1621, 1664, 1815, 2065
Hpy8I	GTNNAC	8 cut(s)	274, 286, 820, 1328, 1621, 1664, 1815, 2065
Hpy99I	CGWCG	4 cut(s)	119, 122, 152, 2059
HpyAV	CCTTC	4 cut(s)	596, 686, 1652, 1981
HpyCH4III	ACNGT	7 cut(s)	25, 290, 392, 999, 1668, 1730, 2069
HpyCH4IV	ACGT	2 cut(s)	1617, 2057
HpyF3I	CTNAG	9 cut(s)	12, 768, 887, 903, 978, 1651, 1848, 1859, 1920
HpySE526I	ACGT	2 cut(s)	1617, 2057
Hsp92I	GRCGYC	1 cut(s)	326
HspAI	GCGC	5 cut(s)	17, 200, 305, 326, 2105
KasI	GGCGCC	1 cut(s)	325
Kpn2I	TCCGGA	1 cut(s)	171
KroI	GCCGGC	1 cut(s)	334
KroNI	GCCGGC	1 cut(s)	336
Ksp22I	TGATCA	2 cut(s)	528, 1870
LmnI	GCTCC	5 cut(s)	265, 293, 455, 1579, 2017
MaeI	CTAG	2 cut(s)	1310, 1422
MaeII	ACGT	2 cut(s)	1617, 2057
MaeIII	GTNAC	8 cut(s)	25, 503, 1017, 1424, 1546, 1733, 1831, 1986
MboII	GAAGA	8 cut(s)	48, 71, 74, 272, 631, 1330, 1395, 1398
MfeI	CAATTG	1 cut(s)	549
MflI	RGATCY	3 cut(s)	142, 772, 1852
MhlI	GDGCHC	2 cut(s)	375, 676
MlsI	TGGCCA	1 cut(s)	936
MluNI	TGGCCA	1 cut(s)	936
Mly113I	GGCGCC	1 cut(s)	326
MlyI	GAGTC	3 cut(s)	191, 500, 676
MmeI	TCCRAC	2 cut(s)	1662, 2078
Mox20I	TGGCCA	1 cut(s)	936
Mph1103I	ATGCAT	2 cut(s)	1711, 2003
MreI	CGCCGGCG	1 cut(s)	334
MroI	TCCGGA	1 cut(s)	171
MroNI	GCCGGC	1 cut(s)	334
MscI	TGGCCA	1 cut(s)	936
MslI	CAYNNNNRTG	3 cut(s)	281, 1107, 1931
Msp20I	TGGCCA	1 cut(s)	936
MspA1I	CMGCKG	1 cut(s)	950
MspCI	CTTAAG	3 cut(s)	1013, 1481, 2108
MspR9I	CCNGG	5 cut(s)	110, 154, 155, 404, 749
MunI	CAATTG	1 cut(s)	549
Mva1269I	GAATGC	3 cut(s)	1289, 1709, 2001
MvaI	CCWGG	2 cut(s)	404, 749
MvnI	CGCG	3 cut(s)	19, 162, 200
NaeI	GCCGGC	1 cut(s)	336
NarI	GGCGCC	1 cut(s)	326
NciI	CCSGG	3 cut(s)	110, 154, 155
NcoI	CCATGG	2 cut(s)	235, 2045
NgoMIV	GCCGGC	1 cut(s)	334
NlaIV	GGNNCC	5 cut(s)	327, 516, 673, 674, 774
NmuCI	GTSAC	6 cut(s)	25, 503, 1017, 1424, 1546, 1831
NruI	TCGCGA	1 cut(s)	162
NsiI	ATGCAT	2 cut(s)	1711, 2003
NspI	RCATGY	2 cut(s)	1913, 2001
OliI	CACNNNNGTG	1 cut(s)	1107
PaeI	GCATGC	2 cut(s)	1913, 2001
PasI	CCCWGGG	1 cut(s)	403
PceI	AGGCCT	1 cut(s)	1970
PctI	GAATGC	3 cut(s)	1289, 1709, 2001
PdiI	GCCGGC	1 cut(s)	336
PfeI	GAWTC	4 cut(s)	175, 1139, 1765, 1806
Pfl23II	CGTACG	1 cut(s)	366
Ple19I	CGATCG	1 cut(s)	136
PleI	GAGTC	3 cut(s)	190, 500, 676
PluTI	GGCGCC	1 cut(s)	329
PpsI	GAGTC	3 cut(s)	190, 500, 676
Ppu21I	YACGTR	1 cut(s)	1618
Psp6I	CCWGG	2 cut(s)	402, 747
PspGI	CCWGG	2 cut(s)	402, 747
PspLI	CGTACG	1 cut(s)	366
PspN4I	GGNNCC	5 cut(s)	327, 516, 673, 674, 774
PspOMI	GGGCCC	1 cut(s)	672
PspPI	GGNCC	5 cut(s)	169, 672, 673, 1888, 2065
PsrI	GAACNNNNNNTAC	2 cut(s)	13, 45
PstI	CTGCAG	4 cut(s)	324, 670, 949, 1494
PsuI	RGATCY	3 cut(s)	142, 772, 1852
PvuI	CGATCG	1 cut(s)	136
PvuII	CAGCTG	1 cut(s)	950
RruI	TCGCGA	1 cut(s)	162
RsaI	GTAC	7 cut(s)	368, 654, 753, 849, 901, 1529, 1814
RsaNI	GTAC	7 cut(s)	367, 653, 752, 848, 900, 1528, 1813
RseI	CAYNNNNRTG	3 cut(s)	281, 1107, 1931
Sau96I	GGNCC	5 cut(s)	169, 672, 673, 1888, 2065
ScaI	AGTACT	1 cut(s)	849
SchI	GAGTC	3 cut(s)	191, 500, 676
ScrFI	CCNGG	5 cut(s)	110, 154, 155, 404, 749
SduI	GDGCHC	2 cut(s)	375, 676
SfcI	CTRYAG	4 cut(s)	320, 666, 945, 1490
SfoI	GGCGCC	1 cut(s)	327
SgrAI	CRCCGGYG	1 cut(s)	334
SinI	GGWCC	2 cut(s)	169, 2065
SmaI	CCCGGG	1 cut(s)	155
SmiMI	CAYNNNNRTG	3 cut(s)	281, 1107, 1931
SmlI	CTYRAG	4 cut(s)	1013, 1481, 1892, 2108
SmoI	CTYRAG	4 cut(s)	1013, 1481, 1892, 2108
SnaBI	TACGTA	1 cut(s)	1618
SphI	GCATGC	2 cut(s)	1913, 2001
SseBI	AGGCCT	1 cut(s)	1970
SspDI	GGCGCC	1 cut(s)	325
SspI	AATATT	1 cut(s)	1774
SspMI	CTAG	2 cut(s)	1310, 1422
StuI	AGGCCT	1 cut(s)	1970
StyD4I	CCNGG	5 cut(s)	108, 152, 153, 402, 747
StyI	CCWWGG	3 cut(s)	235, 1278, 2045
TaaI	ACNGT	7 cut(s)	25, 290, 392, 999, 1668, 1730, 2069
TaiI	ACGT	2 cut(s)	1620, 2060
TaqI	TCGA	8 cut(s)	57, 84, 120, 381, 642, 763, 1381, 2121
TatI	WGTACW	4 cut(s)	847, 899, 1527, 1812
TauI	GCSGC	3 cut(s)	233, 665, 1900
TfiI	GAWTC	4 cut(s)	175, 1139, 1765, 1806
TscAI	CASTG	1 cut(s)	1216
TseFI	GTSAC	6 cut(s)	25, 503, 1017, 1424, 1546, 1831
Tsp45I	GTSAC	6 cut(s)	25, 503, 1017, 1424, 1546, 1831
TspDTI	ATGAA	3 cut(s)	582, 717, 1798
TspGWI	ACGGA	1 cut(s)	1703
TspMI	CCCGGG	1 cut(s)	153
TspRI	CASTG	1 cut(s)	1216
Vha464I	CTTAAG	3 cut(s)	1013, 1481, 2108
VpaK11BI	GGWCC	2 cut(s)	169, 2065
XapI	RAATTY	4 cut(s)	188, 609, 1244, 1683
XceI	RCATGY	2 cut(s)	1913, 2001
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1285, 1776
XmaI	CCCGGG	1 cut(s)	153
XspI	CTAG	2 cut(s)	1310, 1422
ZrmI	AGTACT	1 cut(s)	849
Zsp2I	ATGCAT	2 cut(s)	1711, 2003

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.