Rroxscaffold_7G00176470

Arm repeat protein interacting with

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
15909711 .. 15914972
5262 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00176470.1

Sequence Viewer

Length: 1947 bp
ATGGACCGCCGCTCCGTCACCAACAGACGCCGCAGTCTGAAGCGGAAGCTGGAACAAGACTTCGTAGAAGAAACCCAAGAAAACGAGCCGGATCGTAAATCTCCGGCCGTCGATCCCCAAGATCCGCTTCTTGAGATTCGCGCCCACGTCAAGGTTCTCGACTCCACCTTCTCCGCCTCCGACGCCGACCGTTCCGCCGCCAAGGTCACCGCCCGAGCCCTCGTCGAACTCGCCAAGAACGAGGACAATCTGAAAGACTTAGTGGAATGCGGAGCGGTTCCGGCTCTGGTTAAGCATCTACGGACGCCGCCGCCGGAGAGAGGCGGAAGCCACAGTCCGATTCCGTGTGAGCACGAGGTTGAGAAAGAAAGTGCTTTCGCGCTTAATCTCATCGCCGTTAAGTTGATGCTGGAGGTTTGTCGCCCTCTTATTGATCTGTTAAAGAGGCACAAGAGTAGTAGTGGCTCAAATGCGGGGGCGGTTGATGGTGTTATCAGGAGAGCTGCGGATGCAATCTGTAACATTTCTCATGAGAATAGCAACATTAAAAACCTTGTCAGGATTGAAGGTGGTATCCCTCCTCTTGTGGAGTTGCTTAACTTCTTTGACACAAAGGTACAGAGGGCAGCTGCAGGGGCCCTGAAGATCCTAGCATTCAAAAATGACGAAAACAAAAATCAGATTGTTGAGTGCAATGCTTTGCCTAACCTGGTACTTATGCTGCGATCTGAGATTGCAACTATGACTTATGAAGCAGTTGGTGTAATTGGTAATCTTGTCCACTCTTCACCAAGCATCAAGAAACTTGTTCTTCTTGCTGGTGCTTTACAACCTGTTATTGATTTACTGAGTTCACCTTGTTTGGAAAGCCAAAGAGAAGCTGCTCTATTACTTGGTCAGTTTGCTACGGCTGATTCAGATTGCAAGGCACACATTGTTCAAAGGGGTGCAGTACAACCATTAATTAAGATGCTCCAGTCACCTGATTCACAGGTCAAGGAGATGTCGGCTTTTGCAATTGGGAGGACACACATAACCAAGCTGGCATTGCTCATAATGGTGATAATGAGGACAACATTGCAGCTCTTATTAAATTTGGGAATTGTCCAGAAATTTCAAGATGGAGAATTCCTTGTTCAACGAACTAAGGATTGTGTTGAAAAGACATTGAAAAGATTAGAGGGGGAAGATTTGTGGTCGAACAGTCATGTCATTCCAATACCTCAGTTGGTTTATGTTAACAGGTCATTTTTATTGAACACAAAGTCTAAAAGCCTGAAGCAGCAACATGATGGTTCATTGGCCTTGCACACATTGGCTACAAAAGCCTCTCCACTCTCTCATGTAGATGCAGTTCCTCCAGCACCAAACTCACAGGTGTACTTGGGTGAGCAATATGTAAACAATCCTACACTTTCTGACATAACATTCGTAGTTGATGGTGGGGATTGTAAACAGTTTTATGCACACAGAATTTGTCTGCTTGCTTCTTCGGAAGCATTTCGAGCCATGTTTGATGGTGGATACAGGGAGAGAGATGCCAAGGATGTAGAGATTCCAAATATTAGATGGGACGTTTTTGAACTGATGATGAGATTCATATACACGGGATCAGTTGAAGTCGATTTGGATATTGCTCACGATCTCCTCAAAGCTGCTGATCAGTATCTTTTAGAAGGTCTTAAGCGTCAATGTGAACATGCCATTGCTCAGGTGGATATCTGTGTGGAAAATGTGTCTCTCATGTTTGAGTTATCAGAGGCCTATAATGCCATGTCATTGATGCAAGCATGCATTCTGTTTGTACTAGAGCAGTTTGATAAGTTGAGTAAGAAACCATGGTTTCAACCACTAATGAAACGAATCATACCGGAGATCCGCAGATTTTTCACTAAAGCACTTACAAAGCCTAACCAGGGTAGCTCGTTGCAGGATAAACTTGCATAG

Protein Analysis

648

Amino Acids

72.1

Weight (kDa)

6.77

Isoelectric Point (pI)

45.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_ARMC5 PF24768 161 - 330 5.8e-09 ARMC5
Arm PF00514 183 - 217 8.1e-06 Armadillo/beta-catenin-like repeat
BTB PF00651 468 - 570 1.3e-22 BTB/POZ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000306)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19330
fragaria_vesca FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 33
AccBSI CCGCTC 2 cut(s) 12, 275
AccII CGCG 2 cut(s) 141, 380
AclWI GGATC 6 cut(s) 99, 107, 116, 640, 1618, 1870
AcoI YGGCCR 1 cut(s) 105
AcsI RAATTY 4 cut(s) 1093, 1112, 1127, 1473
AcuI CTGAAG 3 cut(s) 59, 662, 1298
AcyI GRCGYC 3 cut(s) 28, 183, 305
AfaI GTAC 5 cut(s) 618, 714, 954, 1382, 1806
AfiI CCNNNNNNNGG 3 cut(s) 151, 320, 1916
AflII CTTAAG 1 cut(s) 1682
AjiI CACGTC 1 cut(s) 148
AjnI CCWGG 2 cut(s) 708, 1914
AjuI GAANNNNNNNTTGG 2 cut(s) 111, 143
AluBI AGCT 8 cut(s) 49, 503, 629, 881, 1042, 1084, 1655, 1923
AluI AGCT 8 cut(s) 49, 503, 629, 881, 1042, 1084, 1655, 1923
Alw21I GWGCWC 1 cut(s) 354
Alw26I GTCTC 1 cut(s) 1743
AlwI GGATC 6 cut(s) 99, 107, 116, 640, 1618, 1870
Ama87I CYCGRG 1 cut(s) 213
AoxI GGCC 4 cut(s) 105, 636, 1302, 1761
ApaI GGGCCC 1 cut(s) 640
ApeKI GCWGC 8 cut(s) 503, 626, 629, 721, 881, 1081, 1282, 1655
ApoI RAATTY 4 cut(s) 1093, 1112, 1127, 1473
ArsI GACNNNNNNTTYG 2 cut(s) 1412, 1444
AseI ATTAAT 1 cut(s) 962
Asp700I GAANNNNTTC 1 cut(s) 1500
AspLEI GCGC 2 cut(s) 143, 382
AspS9I GGNCC 3 cut(s) 4, 636, 637
AsuHPI GGTGA 7 cut(s) 10, 199, 780, 846, 972, 1072, 1400
AvaI CYCGRG 1 cut(s) 213
AvaII GGWCC 1 cut(s) 4
BaeGI GKGCMC 1 cut(s) 640
BanII GRGCYC 2 cut(s) 220, 640
BauI CACGAG 1 cut(s) 353
Bbv12I GWGCWC 1 cut(s) 354
BbvI GCAGC 8 cut(s) 490, 616, 638, 708, 868, 1093, 1294, 1642
BccI CCATC 6 cut(s) 479, 1115, 1286, 1433, 1511, 1563
BceAI ACGGC 3 cut(s) 92, 380, 924
BciT130I CCWGG 2 cut(s) 710, 1916
BciVI GTATCC 2 cut(s) 584, 1517
BclI TGATCA 1 cut(s) 1660
BcoDI GTCTC 1 cut(s) 1743
BfaI CTAG 2 cut(s) 650, 1808
BfmI CTRYAG 1 cut(s) 630
BfrI CTTAAG 1 cut(s) 1682
BfuI GTATCC 2 cut(s) 584, 1517
Bme1390I CCNGG 2 cut(s) 710, 1916
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 1 cut(s) 213
BmgBI CACGTC 1 cut(s) 148
BmgT120I GGNCC 3 cut(s) 4, 636, 637
BmiI GGNNCC 3 cut(s) 279, 637, 638
BmrFI CCNGG 2 cut(s) 710, 1916
BmsI GCATC 8 cut(s) 304, 396, 499, 804, 960, 1339, 1528, 1773
BpmI CTGGAG 3 cut(s) 431, 959, 1344
Bpu10I CCTNAGC 1 cut(s) 1710
BpuEI CTTGAG 1 cut(s) 152
BsaBI GATNNNNATC 1 cut(s) 1665
BsaHI GRCGYC 3 cut(s) 28, 183, 305
BsaJI CCNNGG 4 cut(s) 201, 1542, 1838, 1915
BsaWI WCCGGW 1 cut(s) 1870
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 3 cut(s) 151, 320, 1916
Bse1I ACTGG 1 cut(s) 976
Bse3DI GCAATG 4 cut(s) 700, 1046, 1076, 1704
Bse8I GATNNNNATC 1 cut(s) 1665
BseBI CCWGG 2 cut(s) 710, 1916
BseDI CCNNGG 4 cut(s) 201, 1542, 1838, 1915
BseGI GGATG 2 cut(s) 514, 1552
BseJI GATNNNNATC 1 cut(s) 1665
BseLI CCNNNNNNNGG 3 cut(s) 151, 320, 1916
BseMI GCAATG 4 cut(s) 700, 1046, 1076, 1704
BseMII CTCAG 4 cut(s) 720, 839, 1238, 1724
BseNI ACTGG 1 cut(s) 976
BseRI GAGGAG 2 cut(s) 570, 1637
BseSI GKGCMC 1 cut(s) 640
BseX3I CGGCCG 1 cut(s) 105
BseXI GCAGC 8 cut(s) 490, 616, 638, 708, 868, 1093, 1294, 1642
BsgI GTGCAG 1 cut(s) 969
Bsh1236I CGCG 2 cut(s) 141, 380
Bsh1285I CGRYCG 2 cut(s) 108, 190
BshFI GGCC 4 cut(s) 107, 638, 1304, 1763
BsiEI CGRYCG 2 cut(s) 108, 190
BsiHKAI GWGCWC 1 cut(s) 354
BsiHKCI CYCGRG 1 cut(s) 213
BsiSI CCGG 5 cut(s) 89, 104, 281, 314, 1871
BslFI GGGAC 1 cut(s) 1586
BslI CCNNNNNNNGG 3 cut(s) 151, 320, 1916
BsmAI GTCTC 1 cut(s) 1743
BsmFI GGGAC 1 cut(s) 1586
BsmI GAATGC 3 cut(s) 272, 653, 1794
BsnI GGCC 4 cut(s) 107, 638, 1304, 1763
BsoBI CYCGRG 1 cut(s) 213
Bsp120I GGGCCC 1 cut(s) 636
Bsp1286I GDGCHC 3 cut(s) 220, 354, 640
Bsp19I CCATGG 1 cut(s) 1838
BspANI GGCC 4 cut(s) 107, 638, 1304, 1763
BspCNI CTCAG 4 cut(s) 721, 840, 1237, 1723
BspFNI CGCG 2 cut(s) 141, 380
BspHI TCATGA 1 cut(s) 529
BspLI GGNNCC 3 cut(s) 279, 637, 638
BspMAI CTGCAG 1 cut(s) 634
BspPI GGATC 6 cut(s) 99, 107, 116, 640, 1618, 1870
BspTI CTTAAG 1 cut(s) 1682
BsrBI CCGCTC 2 cut(s) 12, 275
BsrDI GCAATG 4 cut(s) 700, 1046, 1076, 1704
BsrI ACTGG 1 cut(s) 976
BssECI CCNNGG 4 cut(s) 201, 1542, 1838, 1915
BssNI GRCGYC 3 cut(s) 28, 183, 305
BssSI CACGAG 1 cut(s) 353
BssT1I CCWWGG 3 cut(s) 201, 1542, 1838
Bst2BI CACGAG 1 cut(s) 353
Bst2UI CCWGG 2 cut(s) 710, 1916
Bst4CI ACNGT 4 cut(s) 191, 335, 1205, 1458
Bst6I CTCTTC 1 cut(s) 790
BstACI GRCGYC 3 cut(s) 28, 183, 305
BstAFI CTTAAG 1 cut(s) 1682
BstC8I GCNNGC 4 cut(s) 1044, 1485, 1788, 1792
BstDEI CTNAG 6 cut(s) 259, 729, 848, 1146, 1224, 1710
BstDSI CCRYGG 1 cut(s) 1838
BstEII GGTNACC 1 cut(s) 205
BstF5I GGATG 2 cut(s) 514, 1552
BstFNI CGCG 2 cut(s) 141, 380
BstHHI GCGC 2 cut(s) 143, 382
BstMAI GTCTC 1 cut(s) 1743
BstMCI CGRYCG 2 cut(s) 108, 190
BstMWI GCNNNNNNNGC 8 cut(s) 182, 281, 509, 635, 1048, 1325, 1505, 1769
BstNI CCWGG 2 cut(s) 710, 1916
BstNSI RCATGY 2 cut(s) 1703, 1794
BstPI GGTNACC 1 cut(s) 205
BstSCI CCNGG 2 cut(s) 708, 1914
BstSFI CTRYAG 1 cut(s) 630
BstSLI GKGCMC 1 cut(s) 640
BstUI CGCG 2 cut(s) 141, 380
BstV1I GCAGC 8 cut(s) 490, 616, 638, 708, 868, 1093, 1294, 1642
BstX2I RGATCY 3 cut(s) 121, 645, 1875
BstYI RGATCY 3 cut(s) 121, 645, 1875
BstZI CGGCCG 1 cut(s) 105
BsuI GTATCC 2 cut(s) 584, 1517
BsuRI GGCC 4 cut(s) 107, 638, 1304, 1763
BtgI CCRYGG 1 cut(s) 1838
BtgZI GCGATG 1 cut(s) 376
BtrI CACGTC 1 cut(s) 148
BtsCI GGATG 2 cut(s) 514, 1552
Cac8I GCNNGC 4 cut(s) 1044, 1485, 1788, 1792
CciI TCATGA 1 cut(s) 529
CfoI GCGC 2 cut(s) 143, 382
Cfr13I GGNCC 3 cut(s) 4, 636, 637
CseI GACGC 4 cut(s) 36, 191, 313, 1676
CsiI ACCWGGT 1 cut(s) 708
Csp6I GTAC 5 cut(s) 617, 713, 953, 1381, 1805
CviQI GTAC 5 cut(s) 617, 713, 953, 1381, 1805
DdeI CTNAG 6 cut(s) 259, 729, 848, 1146, 1224, 1710
DrdI GACNNNNNNGTC 1 cut(s) 33
DseDI GACNNNNNNGTC 1 cut(s) 33
EaeI YGGCCR 1 cut(s) 105
EagI CGGCCG 1 cut(s) 105
Eam1104I CTCTTC 1 cut(s) 790
EarI CTCTTC 1 cut(s) 790
EciI GGCGGA 3 cut(s) 163, 184, 339
EclXI CGGCCG 1 cut(s) 105
Eco130I CCWWGG 3 cut(s) 201, 1542, 1838
Eco147I AGGCCT 1 cut(s) 1763
Eco24I GRGCYC 2 cut(s) 220, 640
Eco32I GATATC 1 cut(s) 1720
Eco47I GGWCC 1 cut(s) 4
Eco52I CGGCCG 1 cut(s) 105
Eco57I CTGAAG 3 cut(s) 59, 662, 1298
Eco88I CYCGRG 1 cut(s) 213
Eco91I GGTNACC 1 cut(s) 205
EcoO109I RGGNCCY 2 cut(s) 636, 637
EcoO65I GGTNACC 1 cut(s) 205
EcoRI GAATTC 1 cut(s) 1127
EcoRII CCWGG 2 cut(s) 708, 1914
EcoRV GATATC 1 cut(s) 1720
EcoT14I CCWWGG 3 cut(s) 201, 1542, 1838
EcoT22I ATGCAT 1 cut(s) 1796
EcoT38I GRGCYC 2 cut(s) 220, 640
ErhI CCWWGG 3 cut(s) 201, 1542, 1838
FalI AAGNNNNNCTT 2 cut(s) 111, 143
FaqI GGGAC 1 cut(s) 1586
FauI CCCGC 1 cut(s) 466
FbaI TGATCA 1 cut(s) 1660
FokI GGATG 2 cut(s) 521, 1559
FriOI GRGCYC 2 cut(s) 220, 640
FspBI CTAG 2 cut(s) 650, 1808
GlaI GCGC 2 cut(s) 142, 381
GsuI CTGGAG 3 cut(s) 431, 959, 1344
HaeIII GGCC 4 cut(s) 107, 638, 1304, 1763
HapII CCGG 5 cut(s) 89, 104, 281, 314, 1871
HgaI GACGC 4 cut(s) 36, 191, 313, 1676
HhaI GCGC 2 cut(s) 143, 382
Hin1I GRCGYC 3 cut(s) 28, 183, 305
Hin6I GCGC 2 cut(s) 141, 380
HinP1I GCGC 2 cut(s) 141, 380
HincII GTYRAC 1 cut(s) 1240
HindII GTYRAC 1 cut(s) 1240
HinfI GANTC 8 cut(s) 136, 161, 340, 914, 986, 1555, 1596, 1863
HpaI GTTAAC 1 cut(s) 1240
HpaII CCGG 5 cut(s) 89, 104, 281, 314, 1871
HphI GGTGA 7 cut(s) 10, 199, 780, 846, 972, 1072, 1400
Hpy166II GTNNAC 7 cut(s) 781, 854, 1240, 1381, 1402, 1454, 1697
Hpy188III TCNNGA 9 cut(s) 131, 158, 496, 530, 559, 799, 1108, 1118, 1640
Hpy8I GTNNAC 7 cut(s) 781, 854, 1240, 1381, 1402, 1454, 1697
Hpy99I CGWCG 3 cut(s) 113, 185, 227
HpyAV CCTTC 3 cut(s) 178, 560, 1670
HpyCH4III ACNGT 4 cut(s) 191, 335, 1205, 1458
HpyCH4IV ACGT 2 cut(s) 147, 1575
HpyF10VI GCNNNNNNNGC 8 cut(s) 182, 281, 509, 635, 1048, 1325, 1505, 1769
HpyF3I CTNAG 6 cut(s) 259, 729, 848, 1146, 1224, 1710
HpySE526I ACGT 2 cut(s) 147, 1575
Hsp92I GRCGYC 3 cut(s) 28, 183, 305
HspAI GCGC 2 cut(s) 141, 380
Ksp22I TGATCA 1 cut(s) 1660
KspAI GTTAAC 1 cut(s) 1240
LmnI GCTCC 3 cut(s) 17, 272, 978
Lsp1109I GCAGC 8 cut(s) 490, 616, 638, 708, 868, 1093, 1294, 1642
LweI GCATC 8 cut(s) 304, 396, 499, 804, 960, 1339, 1528, 1773
MabI ACCWGGT 1 cut(s) 708
MaeI CTAG 2 cut(s) 650, 1808
MaeII ACGT 2 cut(s) 147, 1575
MaeIII GTNAC 4 cut(s) 16, 205, 518, 978
MbiI CCGCTC 2 cut(s) 12, 275
MboII GAAGA 6 cut(s) 80, 655, 777, 803, 1199, 1482
MfeI CAATTG 1 cut(s) 1017
MflI RGATCY 3 cut(s) 121, 645, 1875
MhlI GDGCHC 3 cut(s) 220, 354, 640
MluCI AATT 8 cut(s) 765, 963, 1017, 1093, 1101, 1112, 1127, 1473
MlyI GAGTC 1 cut(s) 155
MmeI TCCRAC 1 cut(s) 204
Mph1103I ATGCAT 1 cut(s) 1796
MroXI GAANNNNTTC 1 cut(s) 1500
MslI CAYNNNNRTG 2 cut(s) 1058, 1347
MspA1I CMGCKG 1 cut(s) 629
MspCI CTTAAG 1 cut(s) 1682
MspI CCGG 5 cut(s) 89, 104, 281, 314, 1871
MspR9I CCNGG 2 cut(s) 710, 1916
MunI CAATTG 1 cut(s) 1017
Mva1269I GAATGC 3 cut(s) 272, 653, 1794
MvaI CCWGG 2 cut(s) 710, 1916
MvnI CGCG 2 cut(s) 141, 380
MwoI GCNNNNNNNGC 8 cut(s) 182, 281, 509, 635, 1048, 1325, 1505, 1769
NcoI CCATGG 1 cut(s) 1838
NlaIV GGNNCC 3 cut(s) 279, 637, 638
NmuCI GTSAC 3 cut(s) 16, 205, 978
NsiI ATGCAT 1 cut(s) 1796
NspI RCATGY 2 cut(s) 1703, 1794
PacI TTAATTAA 1 cut(s) 966
PaeI GCATGC 1 cut(s) 1794
PagI TCATGA 1 cut(s) 529
PceI AGGCCT 1 cut(s) 1763
PcsI WCGNNNNNNNCGW 1 cut(s) 237
PctI GAATGC 3 cut(s) 272, 653, 1794
PdmI GAANNNNTTC 1 cut(s) 1500
PfeI GAWTC 7 cut(s) 136, 340, 914, 986, 1555, 1596, 1863
PleI GAGTC 1 cut(s) 155
PpsI GAGTC 1 cut(s) 155
PshBI ATTAAT 1 cut(s) 962
Psp6I CCWGG 2 cut(s) 708, 1914
PspEI GGTNACC 1 cut(s) 205
PspGI CCWGG 2 cut(s) 708, 1914
PspN4I GGNNCC 3 cut(s) 279, 637, 638
PspOMI GGGCCC 1 cut(s) 636
PspPI GGNCC 3 cut(s) 4, 636, 637
PsrI GAACNNNNNNTAC 2 cut(s) 1338, 1370
PstI CTGCAG 1 cut(s) 634
PsuI RGATCY 3 cut(s) 121, 645, 1875
PvuII CAGCTG 1 cut(s) 629
RsaI GTAC 5 cut(s) 618, 714, 954, 1382, 1806
RsaNI GTAC 5 cut(s) 617, 713, 953, 1381, 1805
RseI CAYNNNNRTG 2 cut(s) 1058, 1347
Sau96I GGNCC 3 cut(s) 4, 636, 637
SchI GAGTC 1 cut(s) 155
ScrFI CCNGG 2 cut(s) 710, 1916
SduI GDGCHC 3 cut(s) 220, 354, 640
SexAI ACCWGGT 1 cut(s) 708
SfaNI GCATC 8 cut(s) 304, 396, 499, 804, 960, 1339, 1528, 1773
SfcI CTRYAG 1 cut(s) 630
SinI GGWCC 1 cut(s) 4
SmiMI CAYNNNNRTG 2 cut(s) 1058, 1347
SmlI CTYRAG 2 cut(s) 131, 1682
SmoI CTYRAG 2 cut(s) 131, 1682
SphI GCATGC 1 cut(s) 1794
Sse9I AATT 8 cut(s) 765, 963, 1017, 1093, 1101, 1112, 1127, 1473
SseBI AGGCCT 1 cut(s) 1763
SspI AATATT 1 cut(s) 1564
SspMI CTAG 2 cut(s) 650, 1808
StuI AGGCCT 1 cut(s) 1763
StyD4I CCNGG 2 cut(s) 708, 1914
StyI CCWWGG 3 cut(s) 201, 1542, 1838
TaaI ACNGT 4 cut(s) 191, 335, 1205, 1458
TaiI ACGT 2 cut(s) 150, 1578
TaqI TCGA 6 cut(s) 111, 159, 225, 1199, 1504, 1623
TasI AATT 8 cut(s) 765, 963, 1017, 1093, 1101, 1112, 1127, 1473
TatI WGTACW 3 cut(s) 952, 1380, 1804
TauI GCSGC 5 cut(s) 12, 33, 200, 310, 313
TfiI GAWTC 7 cut(s) 136, 340, 914, 986, 1555, 1596, 1863
TseFI GTSAC 3 cut(s) 16, 205, 978
TseI GCWGC 8 cut(s) 503, 626, 629, 721, 881, 1081, 1282, 1655
Tsp45I GTSAC 3 cut(s) 16, 205, 978
TspDTI ATGAA 4 cut(s) 765, 1287, 1588, 1871
TspGWI ACGGA 3 cut(s) 4, 316, 333
Vha464I CTTAAG 1 cut(s) 1682
VpaK11BI GGWCC 1 cut(s) 4
VspI ATTAAT 1 cut(s) 962
XapI RAATTY 4 cut(s) 1093, 1112, 1127, 1473
XceI RCATGY 2 cut(s) 1703, 1794
XcmI CCANNNNNNNNNTGG 2 cut(s) 1566, 1711
XmnI GAANNNNTTC 1 cut(s) 1500
XspI CTAG 2 cut(s) 650, 1808
Zsp2I ATGCAT 1 cut(s) 1796
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.