pycom03g21190

Arm repeat protein interacting with

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
21500916 .. 21502494
1579 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g21190.2

Sequence Viewer

Length: 756 bp
ATGGAACGCTCTCAGACGCGAACCGTCACTACCAAAAGAGGCTTGAAGCGGAAGCTCGAAGAAGGCTTCAGAGAAGAAAAGGTTGAGGGTGAACCGGACCGGAAAGTCCCGGCCGTCCTCGAACCTCAGGACGATCGCCCAGATCTCGTCGTTCGGGTTCGCGAGCAGGTTCAGATTCTGGAGTCCAAATTCTCGTCTGCCCAATCCGACCGCCTACTCGCCAAGCAGGCCGCCCATGGCCTCGCTCTCACCGCCAAGGAAGGTAGCCTGGAGTATCAACAACTCGTGGTTGATGCCGGAGCTTTACCACATCTTGTTGATCTGTTAAAAAGGCACAAGCGGGGAAGTGGATCACCGGCACCTGATGCTGTTCGATCAGGAGAGCTTGTGATACAATTGCTCACATTGCCCATGAAAATGGCAACACTAAGAACCTTGTCAGGTGGAATCCCTCCTCTTGTTGGACTGCTTAACTTCTTTGACACAAAGGTACAGATAGCGGCTGCAGGTGCCCTTCAGACTCTGGCATTTAAAAATGATGAAAACAAAAACCAGCTGATTTGCATTGCAAAATTCCAGATTGTAGTAGAGTGCGGTGCTTTGCCTACCCTGCTACTAATGCTTCGGTCTGAGGATCCTGTGATGTCCTTTGAAGCGGTTGGTGTAATAGGCAATCTTGTCCACTCATCCCCACACATCAAGAAATTAGTACTTCTTGCTGGTGCTTTACAACCTATTATTGGATTGCTGGGGTGA

Protein Analysis

252

Amino Acids

27.28

Weight (kDa)

9.07

Isoelectric Point (pI)

48.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000306)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19330
fragaria_vesca FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 497
AasI GACNNNNNNGTC 1 cut(s) 104
Acc36I ACCTGC 2 cut(s) 157, 497
AccB1I GGYRCC 2 cut(s) 358, 509
AccII CGCG 2 cut(s) 19, 162
AciI CCGC 8 cut(s) 49, 211, 231, 252, 340, 500, 594, 656
AclWI GGATC 3 cut(s) 358, 629, 642
AcoI YGGCCR 1 cut(s) 111
AcsI RAATTY 2 cut(s) 188, 572
AcuI CTGAAG 2 cut(s) 52, 500
AfaI GTAC 2 cut(s) 492, 711
AfiI CCNNNNNNNGG 2 cut(s) 461, 740
AgsI TTSAA 2 cut(s) 46, 653
AjnI CCWGG 1 cut(s) 267
AluBI AGCT 4 cut(s) 55, 302, 385, 556
AluI AGCT 4 cut(s) 55, 302, 385, 556
AlwI GGATC 3 cut(s) 358, 629, 642
AlwNI CAGNNNCTG 2 cut(s) 178, 523
AoxI GGCC 3 cut(s) 111, 228, 238
ApeKI GCWGC 1 cut(s) 503
ApoI RAATTY 2 cut(s) 188, 572
AspS9I GGNCC 1 cut(s) 97
AsuC2I CCSGG 1 cut(s) 110
AsuHPI GGTGA 3 cut(s) 101, 241, 345
AvaII GGWCC 1 cut(s) 97
AxyI CCTNAGG 1 cut(s) 126
BaeGI GKGCMC 1 cut(s) 514
BamHI GGATCC 1 cut(s) 634
BanI GGYRCC 2 cut(s) 358, 509
BauI CACGAG 1 cut(s) 284
BbvI GCAGC 1 cut(s) 490
BceAI ACGGC 1 cut(s) 98
BciT130I CCWGG 1 cut(s) 269
BcnI CCSGG 1 cut(s) 110
BfmI CTRYAG 1 cut(s) 504
BfuAI ACCTGC 2 cut(s) 157, 497
BglI GCCNNNNNGGC 1 cut(s) 227
BglII AGATCT 1 cut(s) 142
BisI GCNGC 3 cut(s) 231, 501, 504
BlsI GCNGC 3 cut(s) 232, 502, 505
BmcAI AGTACT 1 cut(s) 711
Bme1390I CCNGG 2 cut(s) 110, 269
Bme18I GGWCC 1 cut(s) 97
BmgT120I GGNCC 1 cut(s) 97
BmiI GGNNCC 3 cut(s) 360, 511, 636
BmrFI CCNGG 2 cut(s) 110, 269
BmsI GCATC 2 cut(s) 283, 355
BpmI CTGGAG 2 cut(s) 200, 290
BpuMI CCSGG 1 cut(s) 110
BsaJI CCNNGG 2 cut(s) 235, 255
BsaWI WCCGGW 2 cut(s) 94, 99
BsaXI ACNNNNNCTCC 2 cut(s) 372, 402
Bsc4I CCNNNNNNNGG 2 cut(s) 461, 740
Bse118I RCCGGY 1 cut(s) 355
Bse21I CCTNAGG 1 cut(s) 126
Bse3DI GCAATG 2 cut(s) 404, 564
BseBI CCWGG 1 cut(s) 269
BseDI CCNNGG 2 cut(s) 235, 255
BseGI GGATG 1 cut(s) 686
BseLI CCNNNNNNNGG 2 cut(s) 461, 740
BseMI GCAATG 2 cut(s) 404, 564
BseMII CTCAG 3 cut(s) 26, 140, 621
BseRI GAGGAG 1 cut(s) 444
BseSI GKGCMC 1 cut(s) 514
BseX3I CGGCCG 1 cut(s) 111
BseXI GCAGC 1 cut(s) 490
BseYI CCCAGC 1 cut(s) 748
Bsh1236I CGCG 2 cut(s) 19, 162
Bsh1285I CGRYCG 3 cut(s) 114, 136, 211
BshFI GGCC 3 cut(s) 113, 230, 240
BshNI GGYRCC 2 cut(s) 358, 509
BsiEI CGRYCG 3 cut(s) 114, 136, 211
BsiSI CCGG 5 cut(s) 95, 100, 110, 297, 356
BslFI GGGAC 1 cut(s) 92
BslI CCNNNNNNNGG 2 cut(s) 461, 740
BsmFI GGGAC 1 cut(s) 92
BsnI GGCC 3 cut(s) 113, 230, 240
Bsp1286I GDGCHC 1 cut(s) 514
Bsp143I GATC 6 cut(s) 133, 142, 319, 350, 374, 634
Bsp19I CCATGG 1 cut(s) 235
Bsp68I TCGCGA 1 cut(s) 162
BspACI CCGC 8 cut(s) 49, 211, 231, 252, 340, 500, 594, 656
BspANI GGCC 3 cut(s) 113, 230, 240
BspCNI CTCAG 3 cut(s) 25, 139, 622
BspFNI CGCG 2 cut(s) 19, 162
BspLI GGNNCC 3 cut(s) 360, 511, 636
BspMAI CTGCAG 1 cut(s) 508
BspMI ACCTGC 2 cut(s) 157, 497
BspPI GGATC 3 cut(s) 358, 629, 642
BspT107I GGYRCC 2 cut(s) 358, 509
BsrDI GCAATG 2 cut(s) 404, 564
BsrFI RCCGGY 1 cut(s) 355
BssAI RCCGGY 1 cut(s) 355
BssECI CCNNGG 2 cut(s) 235, 255
BssMI GATC 6 cut(s) 133, 142, 319, 350, 374, 634
BssSI CACGAG 1 cut(s) 284
BssT1I CCWWGG 2 cut(s) 235, 255
Bst2BI CACGAG 1 cut(s) 284
Bst2UI CCWGG 1 cut(s) 269
Bst4CI ACNGT 1 cut(s) 25
BstAPI GCANNNNNTGC 1 cut(s) 365
BstC8I GCNNGC 2 cut(s) 164, 228
BstDEI CTNAG 4 cut(s) 12, 126, 428, 630
BstDSI CCRYGG 1 cut(s) 235
BstF5I GGATG 1 cut(s) 686
BstFNI CGCG 2 cut(s) 19, 162
BstKTI GATC 6 cut(s) 136, 145, 322, 353, 377, 637
BstMBI GATC 6 cut(s) 133, 142, 319, 350, 374, 634
BstMCI CGRYCG 3 cut(s) 114, 136, 211
BstMWI GCNNNNNNNGC 7 cut(s) 227, 251, 365, 406, 509, 610, 619
BstNI CCWGG 1 cut(s) 269
BstSCI CCNGG 2 cut(s) 108, 267
BstSFI CTRYAG 1 cut(s) 504
BstSLI GKGCMC 1 cut(s) 514
BstUI CGCG 2 cut(s) 19, 162
BstV1I GCAGC 1 cut(s) 490
BstX2I RGATCY 2 cut(s) 142, 634
BstXI CCANNNNNNTGG 1 cut(s) 418
BstYI RGATCY 2 cut(s) 142, 634
BstZI CGGCCG 1 cut(s) 111
Bsu36I CCTNAGG 1 cut(s) 126
BsuRI GGCC 3 cut(s) 113, 230, 240
BtgI CCRYGG 1 cut(s) 235
BtsCI GGATG 1 cut(s) 686
BtuMI TCGCGA 1 cut(s) 162
BveI ACCTGC 2 cut(s) 157, 497
Cac8I GCNNGC 2 cut(s) 164, 228
CaiI CAGNNNCTG 2 cut(s) 178, 523
Cfr10I RCCGGY 1 cut(s) 355
Cfr13I GGNCC 1 cut(s) 97
CpoI CGGWCCG 1 cut(s) 97
CseI GACGC 1 cut(s) 25
Csp6I GTAC 2 cut(s) 491, 710
CspI CGGWCCG 1 cut(s) 97
CviAII CATG 2 cut(s) 236, 412
CviQI GTAC 2 cut(s) 491, 710
DdeI CTNAG 4 cut(s) 12, 126, 428, 630
DpnI GATC 6 cut(s) 135, 144, 321, 352, 376, 636
DpnII GATC 6 cut(s) 133, 142, 319, 350, 374, 634
DraI TTTAAA 1 cut(s) 532
DrdI GACNNNNNNGTC 1 cut(s) 104
DseDI GACNNNNNNGTC 1 cut(s) 104
EaeI YGGCCR 1 cut(s) 111
EagI CGGCCG 1 cut(s) 111
EclXI CGGCCG 1 cut(s) 111
Eco130I CCWWGG 2 cut(s) 235, 255
Eco47I GGWCC 1 cut(s) 97
Eco52I CGGCCG 1 cut(s) 111
Eco57I CTGAAG 2 cut(s) 52, 500
Eco81I CCTNAGG 1 cut(s) 126
EcoRII CCWGG 1 cut(s) 267
EcoT14I CCWWGG 2 cut(s) 235, 255
ErhI CCWWGG 2 cut(s) 235, 255
FaeI CATG 2 cut(s) 239, 415
FaiI YATR 2 cut(s) 237, 413
FaqI GGGAC 1 cut(s) 92
FatI CATG 2 cut(s) 235, 411
FauI CCCGC 1 cut(s) 333
Fnu4HI GCNGC 3 cut(s) 231, 501, 504
FokI GGATG 1 cut(s) 673
Fsp4HI GCNGC 3 cut(s) 231, 501, 504
GluI GCNGC 3 cut(s) 231, 501, 504
GsaI CCCAGC 1 cut(s) 752
GsuI CTGGAG 2 cut(s) 200, 290
HaeIII GGCC 3 cut(s) 113, 230, 240
HapII CCGG 5 cut(s) 95, 100, 110, 297, 356
HgaI GACGC 1 cut(s) 25
Hin1II CATG 2 cut(s) 239, 415
HinfI GANTC 4 cut(s) 175, 182, 447, 520
HpaII CCGG 5 cut(s) 95, 100, 110, 297, 356
HphI GGTGA 3 cut(s) 101, 241, 345
Hpy166II GTNNAC 2 cut(s) 92, 682
Hpy188I TCNGA 6 cut(s) 15, 71, 174, 208, 519, 631
Hpy188III TCNNGA 6 cut(s) 128, 161, 179, 378, 577, 700
Hpy8I GTNNAC 2 cut(s) 92, 682
Hpy99I CGWCG 1 cut(s) 152
HpyAV CCTTC 3 cut(s) 56, 254, 524
HpyCH4III ACNGT 1 cut(s) 25
HpyCH4V TGCA 3 cut(s) 506, 564, 569
HpyF10VI GCNNNNNNNGC 7 cut(s) 227, 251, 365, 406, 509, 610, 619
HpyF3I CTNAG 4 cut(s) 12, 126, 428, 630
Hsp92II CATG 2 cut(s) 239, 415
Kzo9I GATC 6 cut(s) 133, 142, 319, 350, 374, 634
LmnI GCTCC 1 cut(s) 299
Lsp1109I GCAGC 1 cut(s) 490
LweI GCATC 2 cut(s) 283, 355
MaeIII GTNAC 1 cut(s) 25
MalI GATC 6 cut(s) 135, 144, 321, 352, 376, 636
MboI GATC 6 cut(s) 133, 142, 319, 350, 374, 634
MboII GAAGA 2 cut(s) 71, 86
MfeI CAATTG 1 cut(s) 395
MflI RGATCY 2 cut(s) 142, 634
MhlI GDGCHC 1 cut(s) 514
MluCI AATT 4 cut(s) 188, 395, 572, 704
MlyI GAGTC 2 cut(s) 191, 514
MmeI TCCRAC 2 cut(s) 231, 442
MnlI CCTC 8 cut(s) 32, 79, 128, 135, 251, 462, 465, 625
MseI TTAA 3 cut(s) 326, 471, 531
MslI CAYNNNNRTG 1 cut(s) 416
MspA1I CMGCKG 1 cut(s) 556
MspI CCGG 5 cut(s) 95, 100, 110, 297, 356
MspR9I CCNGG 2 cut(s) 110, 269
MunI CAATTG 1 cut(s) 395
MvaI CCWGG 1 cut(s) 269
MvnI CGCG 2 cut(s) 19, 162
MwoI GCNNNNNNNGC 7 cut(s) 227, 251, 365, 406, 509, 610, 619
NciI CCSGG 1 cut(s) 110
NcoI CCATGG 1 cut(s) 235
NdeII GATC 6 cut(s) 133, 142, 319, 350, 374, 634
NlaIII CATG 2 cut(s) 239, 415
NlaIV GGNNCC 3 cut(s) 360, 511, 636
NmuCI GTSAC 1 cut(s) 25
NruI TCGCGA 1 cut(s) 162
PaqCI CACCTGC 1 cut(s) 497
PfeI GAWTC 2 cut(s) 175, 447
PkrI GCNGC 3 cut(s) 232, 502, 505
Ple19I CGATCG 1 cut(s) 136
PleI GAGTC 2 cut(s) 190, 514
PpsI GAGTC 2 cut(s) 190, 514
Psp6I CCWGG 1 cut(s) 267
PspFI CCCAGC 1 cut(s) 748
PspGI CCWGG 1 cut(s) 267
PspN4I GGNNCC 3 cut(s) 360, 511, 636
PspPI GGNCC 1 cut(s) 97
PsrI GAACNNNNNNTAC 2 cut(s) 13, 45
PstI CTGCAG 1 cut(s) 508
PstNI CAGNNNCTG 2 cut(s) 178, 523
PsuI RGATCY 2 cut(s) 142, 634
PvuI CGATCG 1 cut(s) 136
PvuII CAGCTG 1 cut(s) 556
RruI TCGCGA 1 cut(s) 162
RsaI GTAC 2 cut(s) 492, 711
RsaNI GTAC 2 cut(s) 491, 710
RseI CAYNNNNRTG 1 cut(s) 416
Rsr2I CGGWCCG 1 cut(s) 97
RsrII CGGWCCG 1 cut(s) 97
SaqAI TTAA 3 cut(s) 326, 471, 531
SatI GCNGC 3 cut(s) 231, 501, 504
Sau3AI GATC 6 cut(s) 133, 142, 319, 350, 374, 634
Sau96I GGNCC 1 cut(s) 97
ScaI AGTACT 1 cut(s) 711
SchI GAGTC 2 cut(s) 191, 514
ScrFI CCNGG 2 cut(s) 110, 269
SduI GDGCHC 1 cut(s) 514
SfaNI GCATC 2 cut(s) 283, 355
SfcI CTRYAG 1 cut(s) 504
SinI GGWCC 1 cut(s) 97
SmiMI CAYNNNNRTG 1 cut(s) 416
Sse9I AATT 4 cut(s) 188, 395, 572, 704
SsiI CCGC 8 cut(s) 49, 211, 231, 252, 340, 500, 594, 656
StyD4I CCNGG 2 cut(s) 108, 267
StyI CCWWGG 2 cut(s) 235, 255
TaaI ACNGT 1 cut(s) 25
TaqI TCGA 3 cut(s) 57, 120, 373
TaqII GACCGA 1 cut(s) 615
TasI AATT 4 cut(s) 188, 395, 572, 704
TatI WGTACW 1 cut(s) 709
TauI GCSGC 2 cut(s) 233, 503
TfiI GAWTC 2 cut(s) 175, 447
Tru1I TTAA 3 cut(s) 326, 471, 531
Tru9I TTAA 3 cut(s) 326, 471, 531
TseFI GTSAC 1 cut(s) 25
TseI GCWGC 1 cut(s) 503
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 2 cut(s) 428, 555
VpaK11BI GGWCC 1 cut(s) 97
XapI RAATTY 2 cut(s) 188, 572
ZrmI AGTACT 1 cut(s) 711
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.