Prupe.1G155300_v2.0.a1

Arm repeat protein interacting with

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000306
Physical Location & Seq
Reverse (-)
12269167 .. 12275600
6434 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G155300.1

Sequence Viewer

Length: 2115 bp
ATGGAGTTGCAGAGGCGCCAGGATCAGAACCACCCGGAGAGGAAGGGGCAAAAGCGGAAACTGGAGGAAGAAATCGGAGACGAACGAGAGATCTCGGTGAAGTCCGGCGAAGCCAGAAAGGCCCTGCTCAGCGAGGTCAGCGAGCAGGTGAAGGTCCTCAACTCTACGTTCTCTTGGAGCGAAGCCGATCGAGCGTCGGCTAAGCGCGCCACGCACGTCCTCGCCGAGCTCGCTAAGAACGAGGAGGTAGTGAACGTGATCGTTGAAGGCGGTGCGGTTCCGGCTCTGGTGAAGCATCTTCAAGCGCCGCCTTTAAGCGAAGGAGACCGGAGTTCGAAGCCGTACGAACACGAGGTCGAGAAGGGAAGTGCCTTTGCACTAGGCCTTCTCGCAGTTAAGCCTGAGCATCAACAACTCATCGTTGACACTGGTGCATTGGCTCATCTTGTGGATTTGTTGAAGAGGCACAAGGATAGTCCTGTATCCAGGGCTTTGTATAGCGTCATTCGTAGAGCTGCTGATGCCATCACCAACCTTGCTCATGAAAACAGCAGCATTAAAACACGTGTCAGAATAGAAGGCGGAATTCCACCTTTAGTTGAGTTGCTTGAATTTGCTGATACCAAGGTGCAAAGGGCAGCTGCTGGAGCACTACGAACCCTGGCATTTAAAAATGACGAGAATAAGAATCAAATTGTCGAATGCAATGCTCTTCCTACCCTCATTCTAATGCTTCGGTCTGAGGATGCTGCCATACATTATGAAGCGGTTGGTGTTATTGGAAATCTGGTACACTCATCTCCAAACATAAAGAAAGAAGTTCTTCTTGCGGGAGCTTTACAACCTGTTATTGGATTGCTTAGTTCTTGCTGCTCTGAGAGCCAAAGAGAGGCAGCTTTATTACTTGGGCAATTTGCTGCAACTGATTCAGATTGCAAGGTTCACATTGTACAGAGGGGTGCTGTCCGACCTTTGATTGAGATGCTTCAATCCCCTGACGTACAACTGAGGGAGATGTCAGCTTTTGCATTGGGGCGATTGGCACAGGACACAAACAACCAAGCTGGTATTGCTCATAATGGTGGTTTATTGCCATTGCTGAAGCTTCTTGATTCAAAAAATGGGTCTTTGCAACATAATGCTGCATTTACTCTTTATGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTTGGAGGTGTTCAGAAGCTGCAGGATGGAGAATTTATTTTTCAAGCAACAAAGGATTGCGTGACCAAAACATTGAAAAGATTAGAGGAGAAGATTCATGGACGAGTTTTGTCCCATTTGTTATATTTGATGCGTGTAGCAGAGAGGGTTGTCCAGAAACGTGTTGCTTTGGCTTTTGCTCATCTTTGTTCCCCAGATGATTTGAGAACAATATTCATTGACAACAATGGGCTGGAGTTGCTTCTTGGGCTTCTTGGCTCTACTGCCCATAAACAGCAACTTGATGCTGCTATGGCTTTGTATAAGTTGGCCAACAAAGCCATGACTCTTTCTCCTGTGGATGCAGCTCCCCCATCTCCGACACCACAGGTCTATCTAGGGGAGCAGTATGTAAACAATCCCACACTGTCCGATGTCATATTTTTAGTTGAAGGTAGACGGTTCTATGCTCACAGAATTTGCCTGCTTGCTTCTTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTACCGGGAGAAGGATGCAAGGGACATAGAGATACCAAATATTAGATGGGAGGTTTTCGAGTTGATGATGAGATTTATATACACTGGATCAGTGGACATTACTCTCGATATTGCTCAAGATCTCCTCAGAGCTGCAGATCAGTATCTTCTGGAGGGACTGAAGCGGCTTTGTGAGTATACAATAGCACAGGACGTATCATTGGAGAATGTTTCAAACATGTATGAACTTTCAGAAGCCTTCCATGCAATGTCATTAAGGCACACGTGCATTTTGTTTATTTTGGAGCAGTTTGAAAAATTGAGTGCCAGACCAGGGCACTCTCATTTGATCATGCGTATAATACCCGAGATCTGCACTTACTTTACTAAAGCGCTTACTAAGCCTAACCCACATAATTTGCGGCTATAA

Protein Analysis

705

Amino Acids

78.11

Weight (kDa)

6.31

Isoelectric Point (pI)

44.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000306)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19330
fragaria_vesca FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 136
Acc36I ACCTGC 1 cut(s) 136
AccB1I GGYRCC 1 cut(s) 15
AccI GTMKAC 2 cut(s) 1636, 1883
AccII CGCG 1 cut(s) 207
AciI CCGC 9 cut(s) 55, 270, 275, 308, 582, 767, 830, 1870, 2107
AclWI GGATC 2 cut(s) 30, 1801
AcoI YGGCCR 1 cut(s) 1509
AcsI RAATTY 4 cut(s) 585, 611, 1232, 1656
AcuI CTGAAG 3 cut(s) 1121, 1659, 1886
AcvI CACGTG 2 cut(s) 566, 1971
AcyI GRCGYC 1 cut(s) 16
AfaI GTAC 4 cut(s) 344, 792, 951, 1002
AfeI AGCGCT 1 cut(s) 2079
AfiI CCNNNNNNNGG 4 cut(s) 851, 889, 1717, 2019
AflIII ACRYGT 5 cut(s) 563, 565, 1360, 1923, 1968
AjiI CACGTC 1 cut(s) 217
AjnI CCWGG 4 cut(s) 18, 485, 660, 2017
Alw21I GWGCWC 2 cut(s) 231, 652
Alw26I GTCTC 2 cut(s) 72, 318
AlwI GGATC 2 cut(s) 30, 1801
AlwNI CAGNNNCTG 2 cut(s) 644, 1219
Ama87I CYCGRG 1 cut(s) 2051
Aor51HI AGCGCT 1 cut(s) 2079
AoxI GGCC 4 cut(s) 120, 382, 1159, 1509
ApoI RAATTY 4 cut(s) 585, 611, 1232, 1656
ArsI GACNNNNNNTTYG 4 cut(s) 339, 371, 1109, 1141
Asp700I GAANNNNTTC 1 cut(s) 822
AspLEI GCGC 5 cut(s) 18, 207, 209, 307, 2080
AspS9I GGNCC 2 cut(s) 121, 154
AsuC2I CCSGG 2 cut(s) 35, 1712
AsuHPI GGTGA 4 cut(s) 109, 160, 301, 520
AsuII TTCGAA 1 cut(s) 335
AvaI CYCGRG 1 cut(s) 2051
AvaII GGWCC 1 cut(s) 154
BaeGI GKGCMC 1 cut(s) 2025
BaeI ACNNNNGTAYC 2 cut(s) 612, 645
BalI TGGCCA 1 cut(s) 1511
BanI GGYRCC 1 cut(s) 15
BanII GRGCYC 1 cut(s) 231
BauI CACGAG 1 cut(s) 350
BbrPI CACGTG 2 cut(s) 566, 1971
Bbv12I GWGCWC 2 cut(s) 231, 652
BccI CCATC 5 cut(s) 533, 1220, 1561, 1694, 1746
BceAI ACGGC 1 cut(s) 325
BcgI CGANNNNNNTGC 2 cut(s) 689, 723
BciT130I CCWGG 4 cut(s) 20, 487, 662, 2019
BciVI GTATCC 1 cut(s) 493
BclI TGATCA 1 cut(s) 2034
BcnI CCSGG 2 cut(s) 35, 1712
BcoDI GTCTC 2 cut(s) 72, 318
BfaI CTAG 2 cut(s) 380, 1577
BfmI CTRYAG 2 cut(s) 1220, 1839
BfoI RGCGCY 3 cut(s) 19, 308, 2081
BfuAI ACCTGC 1 cut(s) 136
BfuI GTATCC 1 cut(s) 493
BglI GCCNNNNNGGC 1 cut(s) 119
BglII AGATCT 3 cut(s) 90, 1825, 2055
BlpI GCTNAGC 2 cut(s) 128, 201
Bme1390I CCNGG 6 cut(s) 20, 35, 487, 662, 1712, 2019
Bme18I GGWCC 1 cut(s) 154
BmeT110I CYCGRG 1 cut(s) 2051
BmgBI CACGTC 1 cut(s) 217
BmgT120I GGNCC 2 cut(s) 121, 154
BmiI GGNNCC 2 cut(s) 17, 279
BmrFI CCNGG 6 cut(s) 20, 35, 487, 662, 1712, 2019
BpmI CTGGAG 4 cut(s) 83, 666, 1454, 1877
Bpu10I CCTNAGC 1 cut(s) 402
Bpu1102I GCTNAGC 2 cut(s) 128, 201
Bpu14I TTCGAA 1 cut(s) 335
BpuEI CTTGAG 1 cut(s) 1806
BpuMI CCSGG 2 cut(s) 35, 1712
BsaAI YACGTR 2 cut(s) 566, 1971
BsaBI GATNNNNATC 1 cut(s) 1848
BsaHI GRCGYC 1 cut(s) 16
BsaI GGTCTC 1 cut(s) 318
BsaJI CCNNGG 4 cut(s) 486, 624, 660, 2018
BsaWI WCCGGW 1 cut(s) 327
BsaXI ACNNNNNCTCC 2 cut(s) 1516, 1546
Bsc4I CCNNNNNNNGG 4 cut(s) 851, 889, 1717, 2019
Bse1I ACTGG 3 cut(s) 66, 433, 1795
Bse3DI GCAATG 4 cut(s) 712, 1094, 1698, 1959
Bse8I GATNNNNATC 1 cut(s) 1848
BseBI CCWGG 4 cut(s) 20, 487, 662, 2019
BseDI CCNNGG 4 cut(s) 486, 624, 660, 2018
BseGI GGATG 4 cut(s) 751, 1231, 1546, 1726
BseJI GATNNNNATC 1 cut(s) 1848
BseLI CCNNNNNNNGG 4 cut(s) 851, 889, 1717, 2019
BseMI GCAATG 4 cut(s) 712, 1094, 1698, 1959
BseMII CTCAG 6 cut(s) 142, 393, 732, 867, 998, 1846
BseNI ACTGG 3 cut(s) 66, 433, 1795
BsePI GCGCGC 1 cut(s) 205
BseRI GAGGAG 3 cut(s) 257, 1301, 1820
BseSI GKGCMC 1 cut(s) 2025
BsgI GTGCAG 1 cut(s) 2044
Bsh1236I CGCG 1 cut(s) 207
Bsh1285I CGRYCG 1 cut(s) 190
BshFI GGCC 4 cut(s) 122, 384, 1161, 1511
BshNI GGYRCC 1 cut(s) 15
BsiEI CGRYCG 1 cut(s) 190
BsiHKAI GWGCWC 2 cut(s) 231, 652
BsiHKCI CYCGRG 1 cut(s) 2051
BsiSI CCGG 5 cut(s) 35, 105, 281, 328, 1711
BsiWI CGTACG 1 cut(s) 342
BslFI GGGAC 3 cut(s) 1297, 1742, 1875
BslI CCNNNNNNNGG 4 cut(s) 851, 889, 1717, 2019
BsmAI GTCTC 2 cut(s) 72, 318
BsmBI CGTCTC 1 cut(s) 72
BsmFI GGGAC 3 cut(s) 1297, 1742, 1875
BsmI GAATGC 1 cut(s) 707
BsnI GGCC 4 cut(s) 122, 384, 1161, 1511
Bso31I GGTCTC 1 cut(s) 318
BsoBI CYCGRG 1 cut(s) 2051
Bsp119I TTCGAA 1 cut(s) 335
Bsp1286I GDGCHC 3 cut(s) 231, 652, 2025
Bsp1407I TGTACA 1 cut(s) 949
Bsp143I GATC 9 cut(s) 22, 90, 187, 258, 1793, 1825, 1843, 2034, 2055
Bsp1720I GCTNAGC 2 cut(s) 128, 201
BspACI CCGC 9 cut(s) 55, 270, 275, 308, 582, 767, 830, 1870, 2107
BspANI GGCC 4 cut(s) 122, 384, 1161, 1511
BspCNI CTCAG 6 cut(s) 141, 394, 733, 868, 999, 1845
BspFNI CGCG 1 cut(s) 207
BspHI TCATGA 1 cut(s) 541
BspLI GGNNCC 2 cut(s) 17, 279
BspMAI CTGCAG 2 cut(s) 1224, 1843
BspMI ACCTGC 1 cut(s) 136
BspPI GGATC 2 cut(s) 30, 1801
BspQI GCTCTTC 1 cut(s) 717
BspT104I TTCGAA 1 cut(s) 335
BspT107I GGYRCC 1 cut(s) 15
BspTNI GGTCTC 1 cut(s) 318
BsrDI GCAATG 4 cut(s) 712, 1094, 1698, 1959
BsrGI TGTACA 1 cut(s) 949
BsrI ACTGG 3 cut(s) 66, 433, 1795
BssECI CCNNGG 4 cut(s) 486, 624, 660, 2018
BssHII GCGCGC 1 cut(s) 205
BssMI GATC 9 cut(s) 22, 90, 187, 258, 1793, 1825, 1843, 2034, 2055
BssNAI GTATAC 1 cut(s) 1884
BssNI GRCGYC 1 cut(s) 16
BssSI CACGAG 1 cut(s) 350
BssT1I CCWWGG 1 cut(s) 624
Bst1107I GTATAC 1 cut(s) 1884
Bst2BI CACGAG 1 cut(s) 350
Bst2UI CCWGG 4 cut(s) 20, 487, 662, 2019
Bst4CI ACNGT 2 cut(s) 1608, 1641
Bst6I CTCTTC 2 cut(s) 455, 717
BstACI GRCGYC 1 cut(s) 16
BstAPI GCANNNNNTGC 1 cut(s) 1688
BstAUI TGTACA 1 cut(s) 949
BstBAI YACGTR 2 cut(s) 566, 1971
BstBI TTCGAA 1 cut(s) 335
BstC8I GCNNGC 5 cut(s) 143, 207, 231, 1664, 1668
BstEII GGTNACC 1 cut(s) 1706
BstF5I GGATG 4 cut(s) 751, 1231, 1546, 1726
BstFNI CGCG 1 cut(s) 207
BstH2I RGCGCY 3 cut(s) 19, 308, 2081
BstHHI GCGC 5 cut(s) 18, 207, 209, 307, 2080
BstKTI GATC 9 cut(s) 25, 93, 190, 261, 1796, 1828, 1846, 2037, 2058
BstMAI GTCTC 2 cut(s) 72, 318
BstMBI GATC 9 cut(s) 22, 90, 187, 258, 1793, 1825, 1843, 2034, 2055
BstMCI CGRYCG 1 cut(s) 190
BstNI CCWGG 4 cut(s) 20, 487, 662, 2019
BstNSI RCATGY 1 cut(s) 1927
BstPI GGTNACC 1 cut(s) 1706
BstSCI CCNGG 6 cut(s) 18, 33, 485, 660, 1710, 2017
BstSFI CTRYAG 2 cut(s) 1220, 1839
BstSLI GKGCMC 1 cut(s) 2025
BstUI CGCG 1 cut(s) 207
BstX2I RGATCY 3 cut(s) 90, 1825, 2055
BstYI RGATCY 3 cut(s) 90, 1825, 2055
BstZ17I GTATAC 1 cut(s) 1884
BsuI GTATCC 1 cut(s) 493
BsuRI GGCC 4 cut(s) 122, 384, 1161, 1511
BtrI CACGTC 1 cut(s) 217
BtsCI GGATG 4 cut(s) 751, 1231, 1546, 1726
BtsIMutI CAGTG 4 cut(s) 426, 1604, 1788, 1803
BveI ACCTGC 1 cut(s) 136
Cac8I GCNNGC 5 cut(s) 143, 207, 231, 1664, 1668
CaiI CAGNNNCTG 2 cut(s) 644, 1219
CciI TCATGA 1 cut(s) 541
CfoI GCGC 5 cut(s) 18, 207, 209, 307, 2080
Cfr13I GGNCC 2 cut(s) 121, 154
CseI GACGC 2 cut(s) 183, 490
Csp6I GTAC 4 cut(s) 343, 791, 950, 1001
CspCI CAANNNNNGTGG 1 cut(s) 2085
CviAII CATG 6 cut(s) 542, 1298, 1522, 1924, 1949, 2038
CviQI GTAC 4 cut(s) 343, 791, 950, 1001
DinI GGCGCC 1 cut(s) 17
DpnI GATC 9 cut(s) 24, 92, 189, 260, 1795, 1827, 1845, 2036, 2057
DpnII GATC 9 cut(s) 22, 90, 187, 258, 1793, 1825, 1843, 2034, 2055
DraI TTTAAA 1 cut(s) 670
EaeI YGGCCR 1 cut(s) 1509
Eam1104I CTCTTC 2 cut(s) 455, 717
EarI CTCTTC 2 cut(s) 455, 717
EciI GGCGGA 1 cut(s) 597
Ecl136II GAGCTC 1 cut(s) 229
Eco130I CCWWGG 1 cut(s) 624
Eco147I AGGCCT 1 cut(s) 384
Eco24I GRGCYC 1 cut(s) 231
Eco31I GGTCTC 1 cut(s) 318
Eco47I GGWCC 1 cut(s) 154
Eco47III AGCGCT 1 cut(s) 2079
Eco53kI GAGCTC 1 cut(s) 229
Eco57I CTGAAG 3 cut(s) 1121, 1659, 1886
Eco72I CACGTG 2 cut(s) 566, 1971
Eco88I CYCGRG 1 cut(s) 2051
Eco91I GGTNACC 1 cut(s) 1706
EcoICRI GAGCTC 1 cut(s) 229
EcoO109I RGGNCCY 2 cut(s) 121, 154
EcoO65I GGTNACC 1 cut(s) 1706
EcoRI GAATTC 1 cut(s) 585
EcoRII CCWGG 4 cut(s) 18, 485, 660, 2017
EcoT14I CCWWGG 1 cut(s) 624
EcoT22I ATGCAT 1 cut(s) 1684
EcoT38I GRGCYC 1 cut(s) 231
EgeI GGCGCC 1 cut(s) 17
EheI GGCGCC 1 cut(s) 17
ErhI CCWWGG 1 cut(s) 624
Esp3I CGTCTC 1 cut(s) 72
FaeI CATG 6 cut(s) 545, 1301, 1525, 1927, 1952, 2041
FalI AAGNNNNNCTT 4 cut(s) 807, 839, 810, 842
FaqI GGGAC 3 cut(s) 1297, 1742, 1875
FatI CATG 6 cut(s) 541, 1297, 1521, 1923, 1948, 2037
FauI CCCGC 1 cut(s) 823
FbaI TGATCA 1 cut(s) 2034
FblI GTMKAC 2 cut(s) 1636, 1883
FokI GGATG 4 cut(s) 758, 1238, 1553, 1733
FriOI GRGCYC 1 cut(s) 231
FspBI CTAG 2 cut(s) 380, 1577
GlaI GCGC 5 cut(s) 17, 206, 208, 306, 2079
GsuI CTGGAG 4 cut(s) 83, 666, 1454, 1877
HaeII RGCGCY 3 cut(s) 19, 308, 2081
HaeIII GGCC 4 cut(s) 122, 384, 1161, 1511
HapII CCGG 5 cut(s) 35, 105, 281, 328, 1711
HgaI GACGC 2 cut(s) 183, 490
HhaI GCGC 5 cut(s) 18, 207, 209, 307, 2080
Hin1I GRCGYC 1 cut(s) 16
Hin1II CATG 6 cut(s) 545, 1301, 1525, 1927, 1952, 2041
Hin6I GCGC 5 cut(s) 16, 205, 207, 305, 2078
HinP1I GCGC 5 cut(s) 16, 205, 207, 305, 2078
HincII GTYRAC 1 cut(s) 424
HindII GTYRAC 1 cut(s) 424
HindIII AAGCTT 1 cut(s) 1103
HinfI GANTC 5 cut(s) 688, 926, 1112, 1294, 1525
HpaII CCGG 5 cut(s) 35, 105, 281, 328, 1711
HphI GGTGA 4 cut(s) 109, 160, 301, 520
Hpy166II GTNNAC 8 cut(s) 253, 424, 793, 943, 1594, 1637, 1801, 1884
Hpy188III TCNNGA 7 cut(s) 358, 542, 1109, 1354, 1811, 1823, 1856
Hpy8I GTNNAC 8 cut(s) 253, 424, 793, 943, 1594, 1637, 1801, 1884
Hpy99I CGWCG 1 cut(s) 199
HpyCH4III ACNGT 2 cut(s) 1608, 1641
HpyCH4IV ACGT 8 cut(s) 167, 216, 255, 565, 999, 1360, 1899, 1970
HpySE526I ACGT 8 cut(s) 167, 216, 255, 565, 999, 1360, 1899, 1970
Hsp92I GRCGYC 1 cut(s) 16
Hsp92II CATG 6 cut(s) 545, 1301, 1525, 1927, 1952, 2041
HspAI GCGC 5 cut(s) 16, 205, 207, 305, 2078
KasI GGCGCC 1 cut(s) 15
Ksp22I TGATCA 1 cut(s) 2034
Kzo9I GATC 9 cut(s) 22, 90, 187, 258, 1793, 1825, 1843, 2034, 2055
LguI GCTCTTC 1 cut(s) 717
LmnI GCTCC 6 cut(s) 177, 647, 833, 1552, 1582, 1990
MaeI CTAG 2 cut(s) 380, 1577
MaeII ACGT 8 cut(s) 167, 216, 255, 565, 999, 1360, 1899, 1970
MaeIII GTNAC 2 cut(s) 1261, 1706
MalI GATC 9 cut(s) 24, 92, 189, 260, 1795, 1827, 1845, 2036, 2057
MboI GATC 9 cut(s) 22, 90, 187, 258, 1793, 1825, 1843, 2034, 2055
MboII GAAGA 8 cut(s) 80, 290, 472, 704, 815, 1303, 1665, 1844
MflI RGATCY 3 cut(s) 90, 1825, 2055
MhlI GDGCHC 3 cut(s) 231, 652, 2025
MlsI TGGCCA 1 cut(s) 1511
MluCI AATT 8 cut(s) 585, 611, 693, 911, 1232, 1656, 2003, 2101
MluNI TGGCCA 1 cut(s) 1511
Mly113I GGCGCC 1 cut(s) 16
MlyI GAGTC 1 cut(s) 1519
MmeI TCCRAC 3 cut(s) 991, 1183, 1583
Mox20I TGGCCA 1 cut(s) 1511
Mph1103I ATGCAT 1 cut(s) 1684
MroXI GAANNNNTTC 1 cut(s) 822
MscI TGGCCA 1 cut(s) 1511
MseI TTAA 5 cut(s) 314, 396, 558, 669, 1961
MslI CAYNNNNRTG 2 cut(s) 728, 1080
Msp20I TGGCCA 1 cut(s) 1511
MspA1I CMGCKG 1 cut(s) 641
MspI CCGG 5 cut(s) 35, 105, 281, 328, 1711
MspR9I CCNGG 6 cut(s) 20, 35, 487, 662, 1712, 2019
Mva1269I GAATGC 1 cut(s) 707
MvaI CCWGG 4 cut(s) 20, 487, 662, 2019
MvnI CGCG 1 cut(s) 207
NarI GGCGCC 1 cut(s) 16
NciI CCSGG 2 cut(s) 35, 1712
NdeII GATC 9 cut(s) 22, 90, 187, 258, 1793, 1825, 1843, 2034, 2055
NlaIII CATG 6 cut(s) 545, 1301, 1525, 1927, 1952, 2041
NlaIV GGNNCC 2 cut(s) 17, 279
NmeAIII GCCGAG 1 cut(s) 250
NmuCI GTSAC 1 cut(s) 1261
NsiI ATGCAT 1 cut(s) 1684
NspI RCATGY 1 cut(s) 1927
NspV TTCGAA 1 cut(s) 335
PagI TCATGA 1 cut(s) 541
PaqCI CACCTGC 1 cut(s) 136
PauI GCGCGC 1 cut(s) 205
PceI AGGCCT 1 cut(s) 384
PciI ACATGT 1 cut(s) 1923
PciSI GCTCTTC 1 cut(s) 717
PcsI WCGNNNNNNNCGW 2 cut(s) 222, 237
PctI GAATGC 1 cut(s) 707
PdmI GAANNNNTTC 1 cut(s) 822
PfeI GAWTC 4 cut(s) 688, 926, 1112, 1294
Pfl23II CGTACG 1 cut(s) 342
Ple19I CGATCG 1 cut(s) 190
PleI GAGTC 1 cut(s) 1519
PluTI GGCGCC 1 cut(s) 19
PmaCI CACGTG 2 cut(s) 566, 1971
PmlI CACGTG 2 cut(s) 566, 1971
PpsI GAGTC 1 cut(s) 1519
Ppu21I YACGTR 2 cut(s) 566, 1971
PpuMI RGGWCCY 1 cut(s) 154
PscI ACATGT 1 cut(s) 1923
Psp124BI GAGCTC 1 cut(s) 231
Psp5II RGGWCCY 1 cut(s) 154
Psp6I CCWGG 4 cut(s) 18, 485, 660, 2017
PspCI CACGTG 2 cut(s) 566, 1971
PspEI GGTNACC 1 cut(s) 1706
PspGI CCWGG 4 cut(s) 18, 485, 660, 2017
PspLI CGTACG 1 cut(s) 342
PspN4I GGNNCC 2 cut(s) 17, 279
PspPI GGNCC 2 cut(s) 121, 154
PspPPI RGGWCCY 1 cut(s) 154
PstI CTGCAG 2 cut(s) 1224, 1843
PstNI CAGNNNCTG 2 cut(s) 644, 1219
PsuI RGATCY 3 cut(s) 90, 1825, 2055
PteI GCGCGC 1 cut(s) 205
PvuI CGATCG 1 cut(s) 190
PvuII CAGCTG 1 cut(s) 641
RsaI GTAC 4 cut(s) 344, 792, 951, 1002
RsaNI GTAC 4 cut(s) 343, 791, 950, 1001
RseI CAYNNNNRTG 2 cut(s) 728, 1080
SacI GAGCTC 1 cut(s) 231
SapI GCTCTTC 1 cut(s) 717
SaqAI TTAA 5 cut(s) 314, 396, 558, 669, 1961
Sau3AI GATC 9 cut(s) 22, 90, 187, 258, 1793, 1825, 1843, 2034, 2055
Sau96I GGNCC 2 cut(s) 121, 154
SchI GAGTC 1 cut(s) 1519
ScrFI CCNGG 6 cut(s) 20, 35, 487, 662, 1712, 2019
SduI GDGCHC 3 cut(s) 231, 652, 2025
SfcI CTRYAG 2 cut(s) 1220, 1839
SfoI GGCGCC 1 cut(s) 17
SfuI TTCGAA 1 cut(s) 335
SinI GGWCC 1 cut(s) 154
SmiMI CAYNNNNRTG 2 cut(s) 728, 1080
SmlI CTYRAG 1 cut(s) 1821
SmoI CTYRAG 1 cut(s) 1821
Sse9I AATT 8 cut(s) 585, 611, 693, 911, 1232, 1656, 2003, 2101
SseBI AGGCCT 1 cut(s) 384
SsiI CCGC 9 cut(s) 55, 270, 275, 308, 582, 767, 830, 1870, 2107
SspDI GGCGCC 1 cut(s) 15
SspI AATATT 2 cut(s) 1413, 1747
SspMI CTAG 2 cut(s) 380, 1577
SstI GAGCTC 1 cut(s) 231
StuI AGGCCT 1 cut(s) 384
StyD4I CCNGG 6 cut(s) 18, 33, 485, 660, 1710, 2017
StyI CCWWGG 1 cut(s) 624
TaaI ACNGT 2 cut(s) 1608, 1641
TaiI ACGT 8 cut(s) 170, 219, 258, 568, 1002, 1363, 1902, 1973
TaqI TCGA 6 cut(s) 190, 335, 357, 699, 1764, 1812
TaqII GACCGA 1 cut(s) 726
TasI AATT 8 cut(s) 585, 611, 693, 911, 1232, 1656, 2003, 2101
TatI WGTACW 1 cut(s) 949
TauI GCSGC 3 cut(s) 310, 1873, 2110
TfiI GAWTC 4 cut(s) 688, 926, 1112, 1294
Tru1I TTAA 5 cut(s) 314, 396, 558, 669, 1961
Tru9I TTAA 5 cut(s) 314, 396, 558, 669, 1961
TscAI CASTG 4 cut(s) 433, 1611, 1795, 1803
TseFI GTSAC 1 cut(s) 1261
Tsp45I GTSAC 1 cut(s) 1261
TspDTI ATGAA 5 cut(s) 558, 777, 1286, 1405, 1944
TspRI CASTG 4 cut(s) 433, 1611, 1795, 1803
VpaK11BI GGWCC 1 cut(s) 154
XapI RAATTY 4 cut(s) 585, 611, 1232, 1656
XceI RCATGY 1 cut(s) 1927
XcmI CCANNNNNNNNNTGG 1 cut(s) 1749
XmiI GTMKAC 2 cut(s) 1636, 1883
XmnI GAANNNNTTC 1 cut(s) 822
XspI CTAG 2 cut(s) 380, 1577
Zsp2I ATGCAT 1 cut(s) 1684
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.