Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000306

Physical Location & Seq

Genomic Coordinates Forward (+)

41972384 .. 41979495

Gene Structure 7112 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ38692

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

ATGTTGGCCGGTTTTACTCCCGACAATTTTTTTTTTGAGCCGGAAAAGAAAAAGAAAAGAAAAAGCTTTTACTTTCTTCTTTTCTTCGGAAATTCCGAAAATACCCTCCGATTTTTCTCTCTCAAAACTTTCTTTCTCTGTCTGTGTCTCACTGACCTGTATTCAAAATCCAAAAAATTCATATCTCTGGATCAGCTTCTCTTCCATTTTCGCGTTTCGCTGATGGAGCTGCCGAGGCGCCAAGATCAGAGCCAATCGGAGAGGAAGGGGCAGAAGCGGAAACTGGAAGAGGAAATCGGAGAGGAGCGAGAGATCACGGTGCAGCAGTCCGGCGACGCCAGAAAAGCCATACTGCTTCAGGTCGCCGAGCAGGTTCAAGTTCTCGACTCTTCTTTTTCCTGGAGCGAAGCTGATCGAAACGCTGCCAAGCGCGCCACTCACGTCCTCGCCGAGCTCGCCAAGAACGAGGACGTAGTGAACGTCATCGTTGAAGGCGGTGCGGTTCCGGCTTTGGTGAAACATCTGCAAGCGCCGCCGTGCAGCGAGGTCGACCGGAGCTCTTCGAAGCACTGCGAACACGAGGTTGAGAAGGGCAGTGCCTTTGCACTAGGCCTTCTTGCCGTTAAGCCCGAGCATCAACAACTCATTGTTGATAATGGTGCATTGTCTCATCTAGTAGATTTGTTGAAGAGGCACAAGGATAGTCATGTAACTCGACCTTTGTATAGCGTCATTCGTAGAGCTGCTGATGCCATCACCAATCTCGCTCATGAAAACAGCAGCATTAAAACCCGTGTCAGGATAGAAGGTGGAATTCCACCTCTAGTTGAGTTGCTTGAATTTGCCGATACAAAGGTGCAAAGAGCAGCTGCTGGAGCGCTACGAACCCTCGCATTTAAAAATGATGAGAATAAGAATCAGATTGTTGAATGCAATGCTCTTCCTACCCTCATTTTAATGCTTCGATCTGAAGATGCTGCTATACATTATGAAGCGGTTGGTGTAATTGGAAATCTAGTTCACTCTTCTCCAAACATAAAGAAAGAGGTTCTTCTTGCGGGAGCTTTACAACCTGTTATTGGATTGCTTAGTTCCTGCTGCTTTGAGAGCCAAAGAGAGGCAGCTTTGCTACTTGGACAATTTGCTGCAACTGATTCAGACTGCAAGGTTCACATTGTACAGAGGGGTGCTGTCCGACCTTTGATTGAGATGCTACAATCCCCAGATGTACAACTCAGGGAGATGTCAGCTTTTGCTTTGGGGAGGTTGGCACAGGACTCACACAACCAAGCTGGTATTGCTCATAATGGTGGTTTATTGCCATTGTTGAAACTTCTGGATTCAAAAAATGGGTCTCTGCAACACAATGCTGCATTTACCCTTTATGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTTGGTGGTGTTCAGAAGTTGCAGGATGGAGAATTTATTTTCCAAGCTACAAAGGATTGTGTGACCAAAACATTGAAAAGATTAGAGGAGAAGATTCATGCACGAGTTTTGTCGCATTTGTTATACTTGATGCGTGTAGCAGAGAGAAATGTCCAAAGACGTGTTGCTTTGGCTTTTGCTCATCTTTGCTCCCCAGAGGATCTCAGAACCATTTTCATCGATAACAATGGTTTGGAATTGCTTCTTGGGCTTCTTGGTTCTAGTAGCCCCAAACAGCAGCTTGATGGTGCTATGGCTCTGTACAAGTTGGCCAACAAAGCCATGACTCTTTCTCCTGTGGATGCAGCTCCTCCATCTCCAACACCACAGGTTTATCTAGGGGAGCAGTATGTTAACAACCCTACGCTGTCCGATGTTACGTTTTTAGTTGAAGGTAGACGGTTCTATGCTCACAGAATTTGCCTGCTTGCTTCTTCAGATGCTTTTCGTGCAATGTTTGATGGTGGTTACCGGGAGAAGGATGCAAGGGACATCGAAATACCAAATATTAGATGGGAGGTTTTTGAGTTGATGATGAGATTTATATACACCGGATCAGTAGACATTACTTTGGATATTGCTCAAGATCTCCTCAGAGCTGCAGATCAGTATCTTTTGGAGGGACTCAAGCGGCTTTGTGAGTATTCAATAGCACAGGACATATCTTTGGAGAATGTTTCAAACATGTATGAACTTTCAGAAGCCTTCCATGCAATGTCATTAAGGCAAACATGTATTTTGTTTATCTTGGAGCAGTTTGAAAAATTGAGTGCTAGACCAGGGCACTGTGAACTGATCAAGAATATATTGGATGAGATCAGATCTTACTTTACTAAAGCACTCACTAAGCCTAACCCACATAACTTGCGGCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0010029 GO:0010033 GO:0010187 GO:0016020 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0050789 GO:0050793 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0065007 GO:0071944 GO:0097305 GO:1900140 GO:1901700 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm BTB

Protein Analysis

780

Amino Acids

87.39

Weight (kDa)

6.56

Isoelectric Point (pI)

48.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	243 - 457	6.8e-16	ARMC5
ARM_PUB	PF25598	248 - 483	1.4e-06	Plant U-box protein ARM repeat region
Arm	PF00514	266 - 298	6e-07	Armadillo/beta-catenin-like repeat
Arm	PF00514	301 - 340	2.1e-07	Armadillo/beta-catenin-like repeat
BTB	PF00651	608 - 708	3.9e-25	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19330
fragaria_vesca	FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica	MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica	Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis	pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis	RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata	RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora	Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii	Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa	Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha	Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana	Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	361
AccB1I	GGYRCC	1 cut(s)	237
AccI	GTMKAC	3 cut(s)	549, 1864, 2028
AccII	CGCG	2 cut(s)	213, 432
AciI	CCGC	8 cut(s)	277, 495, 500, 533, 995, 1058, 2098, 2335
AclWI	GGATC	3 cut(s)	198, 1635, 2029
AcoI	YGGCCR	2 cut(s)	6, 1737
AcsI	RAATTY	6 cut(s)	91, 176, 813, 839, 1460, 1884
AcuI	CTGAAG	3 cut(s)	341, 990, 1887
AcyI	GRCGYC	2 cut(s)	238, 336
AfaI	GTAC	3 cut(s)	1179, 1230, 1730
AfeI	AGCGCT	1 cut(s)	879
AfiI	CCNNNNNNNGG	4 cut(s)	798, 1079, 1117, 1945
AflIII	ACRYGT	3 cut(s)	1588, 2151, 2198
AjiI	CACGTC	2 cut(s)	442, 1589
AjnI	CCWGG	2 cut(s)	398, 2245
AjuI	GAANNNNNNNTTGG	2 cut(s)	1656, 1688
AloI	GAACNNNNNNTCC	2 cut(s)	1002, 1034
Alw21I	GWGCWC	2 cut(s)	456, 560
Alw26I	GTCTC	3 cut(s)	152, 672, 1359
AlwI	GGATC	3 cut(s)	198, 1635, 2029
AlwNI	CAGNNNCTG	1 cut(s)	872
Ama87I	CYCGRG	1 cut(s)	629
Aor51HI	AGCGCT	1 cut(s)	879
AoxI	GGCC	4 cut(s)	6, 610, 1387, 1737
ApoI	RAATTY	6 cut(s)	91, 176, 813, 839, 1460, 1884
ArsI	GACNNNNNNTTYG	2 cut(s)	1337, 1369
Asp700I	GAANNNNTTC	1 cut(s)	1668
AspLEI	GCGC	5 cut(s)	240, 432, 434, 532, 880
AsuC2I	CCSGG	1 cut(s)	1940
AsuHPI	GGTGA	2 cut(s)	526, 748
AsuII	TTCGAA	1 cut(s)	563
AvaI	CYCGRG	1 cut(s)	629
BaeGI	GKGCMC	1 cut(s)	2253
BaeI	ACNNNNGTAYC	2 cut(s)	840, 873
BalI	TGGCCA	1 cut(s)	1739
BanI	GGYRCC	1 cut(s)	237
BanII	GRGCYC	2 cut(s)	456, 560
BauI	CACGAG	2 cut(s)	578, 1530
Bbv12I	GWGCWC	2 cut(s)	456, 560
BccI	CCATC	7 cut(s)	217, 761, 1448, 1706, 1789, 1922, 1974
BceAI	ACGGC	2 cut(s)	520, 605
BcgI	CGANNNNNNTGC	2 cut(s)	529, 563
BciT130I	CCWGG	2 cut(s)	400, 2247
BclI	TGATCA	1 cut(s)	2262
BcnI	CCSGG	1 cut(s)	1940
BcoDI	GTCTC	3 cut(s)	152, 672, 1359
BfaI	CTAG	7 cut(s)	608, 674, 824, 1016, 1689, 1805, 2241
BfmI	CTRYAG	2 cut(s)	2067, 2339
BfoI	RGCGCY	3 cut(s)	241, 533, 881
BfuAI	ACCTGC	1 cut(s)	361
BglII	AGATCT	2 cut(s)	2053, 2288
Bme1390I	CCNGG	3 cut(s)	400, 1940, 2247
BmeT110I	CYCGRG	1 cut(s)	629
BmgBI	CACGTC	2 cut(s)	442, 1589
BmiI	GGNNCC	2 cut(s)	239, 504
BmrFI	CCNGG	3 cut(s)	400, 1940, 2247
BmsI	GCATC	8 cut(s)	643, 739, 964, 1200, 1548, 1759, 1897, 1939
BpmI	CTGGAG	2 cut(s)	421, 894
Bpu14I	TTCGAA	1 cut(s)	563
BpuEI	CTTGAG	2 cut(s)	2034, 2078
BpuMI	CCSGG	1 cut(s)	1940
Bsa29I	ATCGAT	1 cut(s)	1647
BsaBI	GATNNNNATC	1 cut(s)	2076
BsaHI	GRCGYC	2 cut(s)	238, 336
BsaI	GGTCTC	1 cut(s)	1359
BsaJI	CCNNGG	2 cut(s)	233, 2246
BsaWI	WCCGGW	2 cut(s)	552, 2018
BsaXI	ACNNNNNCTCC	2 cut(s)	1744, 1774
Bsc4I	CCNNNNNNNGG	4 cut(s)	798, 1079, 1117, 1945
Bse118I	RCCGGY	1 cut(s)	8
Bse1I	ACTGG	1 cut(s)	288
Bse3DI	GCAATG	3 cut(s)	940, 1926, 2187
Bse8I	GATNNNNATC	1 cut(s)	2076
BseBI	CCWGG	2 cut(s)	400, 2247
BseCI	ATCGAT	1 cut(s)	1647
BseDI	CCNNGG	2 cut(s)	233, 2246
BseGI	GGATG	4 cut(s)	1459, 1774, 1954, 2284
BseJI	GATNNNNATC	1 cut(s)	2076
BseLI	CCNNNNNNNGG	4 cut(s)	798, 1079, 1117, 1945
BseMI	GCAATG	3 cut(s)	940, 1926, 2187
BseMII	CTCAG	3 cut(s)	1249, 1645, 2074
BseNI	ACTGG	1 cut(s)	288
BsePI	GCGCGC	1 cut(s)	430
BseRI	GAGGAG	4 cut(s)	317, 1529, 1767, 2048
BseSI	GKGCMC	1 cut(s)	2253
BsgI	GTGCAG	2 cut(s)	341, 559
Bsh1236I	CGCG	2 cut(s)	213, 432
Bsh1285I	CGRYCG	1 cut(s)	553
BshFI	GGCC	4 cut(s)	8, 612, 1389, 1739
BshNI	GGYRCC	1 cut(s)	237
BshVI	ATCGAT	1 cut(s)	1647
BsiEI	CGRYCG	1 cut(s)	553
BsiHKAI	GWGCWC	2 cut(s)	456, 560
BsiHKCI	CYCGRG	1 cut(s)	629
BsiSI	CCGG	7 cut(s)	9, 41, 330, 506, 553, 1939, 2019
BslFI	GGGAC	2 cut(s)	1970, 2103
BslI	CCNNNNNNNGG	4 cut(s)	798, 1079, 1117, 1945
BsmAI	GTCTC	3 cut(s)	152, 672, 1359
BsmFI	GGGAC	2 cut(s)	1970, 2103
BsmI	GAATGC	1 cut(s)	935
BsnI	GGCC	4 cut(s)	8, 612, 1389, 1739
Bso31I	GGTCTC	1 cut(s)	1359
BsoBI	CYCGRG	1 cut(s)	629
Bsp119I	TTCGAA	1 cut(s)	563
Bsp1286I	GDGCHC	3 cut(s)	456, 560, 2253
Bsp1407I	TGTACA	3 cut(s)	1177, 1228, 1728
BspACI	CCGC	8 cut(s)	277, 495, 500, 533, 995, 1058, 2098, 2335
BspANI	GGCC	4 cut(s)	8, 612, 1389, 1739
BspCNI	CTCAG	3 cut(s)	1248, 1644, 2073
BspDI	ATCGAT	1 cut(s)	1647
BspFNI	CGCG	2 cut(s)	213, 432
BspHI	TCATGA	1 cut(s)	769
BspLI	GGNNCC	2 cut(s)	239, 504
BspMAI	CTGCAG	1 cut(s)	2071
BspMI	ACCTGC	1 cut(s)	361
BspPI	GGATC	3 cut(s)	198, 1635, 2029
BspQI	GCTCTTC	2 cut(s)	565, 945
BspT104I	TTCGAA	1 cut(s)	563
BspT107I	GGYRCC	1 cut(s)	237
BspTNI	GGTCTC	1 cut(s)	1359
BsrDI	GCAATG	3 cut(s)	940, 1926, 2187
BsrFI	RCCGGY	1 cut(s)	8
BsrGI	TGTACA	3 cut(s)	1177, 1228, 1728
BsrI	ACTGG	1 cut(s)	288
BssAI	RCCGGY	1 cut(s)	8
BssECI	CCNNGG	2 cut(s)	233, 2246
BssHII	GCGCGC	1 cut(s)	430
BssNI	GRCGYC	2 cut(s)	238, 336
BssSI	CACGAG	2 cut(s)	578, 1530
Bst2BI	CACGAG	2 cut(s)	578, 1530
Bst2UI	CCWGG	2 cut(s)	400, 2247
Bst4CI	ACNGT	3 cut(s)	319, 1869, 2255
Bst6I	CTCTTC	7 cut(s)	206, 282, 394, 565, 683, 945, 1030
BstACI	GRCGYC	2 cut(s)	238, 336
BstAUI	TGTACA	3 cut(s)	1177, 1228, 1728
BstBI	TTCGAA	1 cut(s)	563
BstC8I	GCNNGC	5 cut(s)	432, 456, 528, 1892, 1896
BstDEI	CTNAG	5 cut(s)	1088, 1235, 1631, 2060, 2313
BstEII	GGTNACC	1 cut(s)	1934
BstF5I	GGATG	4 cut(s)	1459, 1774, 1954, 2284
BstFNI	CGCG	2 cut(s)	213, 432
BstH2I	RGCGCY	3 cut(s)	241, 533, 881
BstHHI	GCGC	5 cut(s)	240, 432, 434, 532, 880
BstMAI	GTCTC	3 cut(s)	152, 672, 1359
BstMCI	CGRYCG	1 cut(s)	553
BstNI	CCWGG	2 cut(s)	400, 2247
BstNSI	RCATGY	2 cut(s)	2155, 2202
BstPI	GGTNACC	1 cut(s)	1934
BstSCI	CCNGG	3 cut(s)	398, 1938, 2245
BstSFI	CTRYAG	2 cut(s)	2067, 2339
BstSLI	GKGCMC	1 cut(s)	2253
BstUI	CGCG	2 cut(s)	213, 432
BstX2I	RGATCY	3 cut(s)	1627, 2053, 2288
BstYI	RGATCY	3 cut(s)	1627, 2053, 2288
Bsu15I	ATCGAT	1 cut(s)	1647
BsuRI	GGCC	4 cut(s)	8, 612, 1389, 1739
BsuTUI	ATCGAT	1 cut(s)	1647
BtrI	CACGTC	2 cut(s)	442, 1589
BtsCI	GGATG	4 cut(s)	1459, 1774, 1954, 2284
BtsI	GCAGTG	2 cut(s)	568, 601
BtsIMutI	CAGTG	4 cut(s)	150, 568, 601, 2251
BveI	ACCTGC	1 cut(s)	361
Cac8I	GCNNGC	5 cut(s)	432, 456, 528, 1892, 1896
CaiI	CAGNNNCTG	1 cut(s)	872
CciI	TCATGA	1 cut(s)	769
CfoI	GCGC	5 cut(s)	240, 432, 434, 532, 880
Cfr10I	RCCGGY	1 cut(s)	8
ClaI	ATCGAT	1 cut(s)	1647
CseI	GACGC	2 cut(s)	344, 718
Csp6I	GTAC	3 cut(s)	1178, 1229, 1729
CspCI	CAANNNNNGTGG	1 cut(s)	2313
CviAII	CATG	7 cut(s)	707, 770, 1526, 1750, 2152, 2177, 2199
CviQI	GTAC	3 cut(s)	1178, 1229, 1729
DdeI	CTNAG	5 cut(s)	1088, 1235, 1631, 2060, 2313
DinI	GGCGCC	1 cut(s)	239
DraI	TTTAAA	1 cut(s)	898
EaeI	YGGCCR	2 cut(s)	6, 1737
Eam1104I	CTCTTC	7 cut(s)	206, 282, 394, 565, 683, 945, 1030
EarI	CTCTTC	7 cut(s)	206, 282, 394, 565, 683, 945, 1030
Ecl136II	GAGCTC	2 cut(s)	454, 558
Eco147I	AGGCCT	1 cut(s)	612
Eco24I	GRGCYC	2 cut(s)	456, 560
Eco31I	GGTCTC	1 cut(s)	1359
Eco47III	AGCGCT	1 cut(s)	879
Eco53kI	GAGCTC	2 cut(s)	454, 558
Eco57I	CTGAAG	3 cut(s)	341, 990, 1887
Eco88I	CYCGRG	1 cut(s)	629
Eco91I	GGTNACC	1 cut(s)	1934
EcoICRI	GAGCTC	2 cut(s)	454, 558
EcoO65I	GGTNACC	1 cut(s)	1934
EcoRI	GAATTC	1 cut(s)	813
EcoRII	CCWGG	2 cut(s)	398, 2245
EcoT38I	GRGCYC	2 cut(s)	456, 560
EgeI	GGCGCC	1 cut(s)	239
EheI	GGCGCC	1 cut(s)	239
FaeI	CATG	7 cut(s)	710, 773, 1529, 1753, 2155, 2180, 2202
FalI	AAGNNNNNCTT	2 cut(s)	1035, 1067
FaqI	GGGAC	2 cut(s)	1970, 2103
FatI	CATG	7 cut(s)	706, 769, 1525, 1749, 2151, 2176, 2198
FauI	CCCGC	1 cut(s)	1051
FbaI	TGATCA	1 cut(s)	2262
FblI	GTMKAC	3 cut(s)	549, 1864, 2028
FokI	GGATG	4 cut(s)	1466, 1781, 1961, 2291
FriOI	GRGCYC	2 cut(s)	456, 560
FspBI	CTAG	7 cut(s)	608, 674, 824, 1016, 1689, 1805, 2241
GlaI	GCGC	5 cut(s)	239, 431, 433, 531, 879
GsuI	CTGGAG	2 cut(s)	421, 894
HaeII	RGCGCY	3 cut(s)	241, 533, 881
HaeIII	GGCC	4 cut(s)	8, 612, 1389, 1739
HapII	CCGG	7 cut(s)	9, 41, 330, 506, 553, 1939, 2019
HgaI	GACGC	2 cut(s)	344, 718
HhaI	GCGC	5 cut(s)	240, 432, 434, 532, 880
Hin1I	GRCGYC	2 cut(s)	238, 336
Hin1II	CATG	7 cut(s)	710, 773, 1529, 1753, 2155, 2180, 2202
Hin6I	GCGC	5 cut(s)	238, 430, 432, 530, 878
HinP1I	GCGC	5 cut(s)	238, 430, 432, 530, 878
HincII	GTYRAC	2 cut(s)	550, 1822
HindII	GTYRAC	2 cut(s)	550, 1822
HindIII	AAGCTT	1 cut(s)	64
HinfI	GANTC	8 cut(s)	386, 916, 1154, 1277, 1340, 1522, 1753, 2091
HpaI	GTTAAC	1 cut(s)	1822
HpaII	CCGG	7 cut(s)	9, 41, 330, 506, 553, 1939, 2019
HphI	GGTGA	2 cut(s)	526, 748
Hpy166II	GTNNAC	8 cut(s)	478, 550, 1021, 1171, 1822, 1865, 2029, 2258
Hpy188III	TCNNGA	8 cut(s)	20, 188, 383, 770, 799, 1337, 2051, 2266
Hpy8I	GTNNAC	8 cut(s)	478, 550, 1021, 1171, 1822, 1865, 2029, 2258
Hpy99I	CGWCG	1 cut(s)	338
HpyAV	CCTTC	8 cut(s)	259, 485, 583, 623, 800, 1853, 1939, 2182
HpyCH4III	ACNGT	3 cut(s)	319, 1869, 2255
HpyCH4IV	ACGT	5 cut(s)	441, 471, 480, 1588, 1847
HpyF3I	CTNAG	5 cut(s)	1088, 1235, 1631, 2060, 2313
HpySE526I	ACGT	5 cut(s)	441, 471, 480, 1588, 1847
Hsp92I	GRCGYC	2 cut(s)	238, 336
Hsp92II	CATG	7 cut(s)	710, 773, 1529, 1753, 2155, 2180, 2202
HspAI	GCGC	5 cut(s)	238, 430, 432, 530, 878
KasI	GGCGCC	1 cut(s)	237
Ksp22I	TGATCA	1 cut(s)	2262
KspAI	GTTAAC	1 cut(s)	1822
LguI	GCTCTTC	2 cut(s)	565, 945
LweI	GCATC	8 cut(s)	643, 739, 964, 1200, 1548, 1759, 1897, 1939
MaeI	CTAG	7 cut(s)	608, 674, 824, 1016, 1689, 1805, 2241
MaeII	ACGT	5 cut(s)	441, 471, 480, 1588, 1847
MaeIII	GTNAC	4 cut(s)	709, 1489, 1843, 1934
MflI	RGATCY	3 cut(s)	1627, 2053, 2288
MhlI	GDGCHC	3 cut(s)	456, 560, 2253
MlsI	TGGCCA	1 cut(s)	1739
MluNI	TGGCCA	1 cut(s)	1739
Mly113I	GGCGCC	1 cut(s)	238
MlyI	GAGTC	4 cut(s)	380, 1271, 1747, 2085
MmeI	TCCRAC	2 cut(s)	1219, 1811
Mox20I	TGGCCA	1 cut(s)	1739
MroXI	GAANNNNTTC	1 cut(s)	1668
MscI	TGGCCA	1 cut(s)	1739
MseI	TTAA	6 cut(s)	624, 786, 897, 956, 1821, 2189
MslI	CAYNNNNRTG	2 cut(s)	956, 1308
Msp20I	TGGCCA	1 cut(s)	1739
MspA1I	CMGCKG	1 cut(s)	869
MspI	CCGG	7 cut(s)	9, 41, 330, 506, 553, 1939, 2019
MspR9I	CCNGG	3 cut(s)	400, 1940, 2247
Mva1269I	GAATGC	1 cut(s)	935
MvaI	CCWGG	2 cut(s)	400, 2247
MvnI	CGCG	2 cut(s)	213, 432
NarI	GGCGCC	1 cut(s)	238
NciI	CCSGG	1 cut(s)	1940
NlaIII	CATG	7 cut(s)	710, 773, 1529, 1753, 2155, 2180, 2202
NlaIV	GGNNCC	2 cut(s)	239, 504
NmeAIII	GCCGAG	3 cut(s)	258, 391, 475
NmuCI	GTSAC	1 cut(s)	1489
NspI	RCATGY	2 cut(s)	2155, 2202
NspV	TTCGAA	1 cut(s)	563
PagI	TCATGA	1 cut(s)	769
PauI	GCGCGC	1 cut(s)	430
PceI	AGGCCT	1 cut(s)	612
PciI	ACATGT	2 cut(s)	2151, 2198
PciSI	GCTCTTC	2 cut(s)	565, 945
PcsI	WCGNNNNNNNCGW	4 cut(s)	93, 447, 462, 477
PctI	GAATGC	1 cut(s)	935
PdmI	GAANNNNTTC	1 cut(s)	1668
PfeI	GAWTC	4 cut(s)	916, 1154, 1340, 1522
PfoI	TCCNGGA	1 cut(s)	398
PleI	GAGTC	4 cut(s)	380, 1271, 1747, 2085
PluTI	GGCGCC	1 cut(s)	241
PpsI	GAGTC	4 cut(s)	380, 1271, 1747, 2085
PscI	ACATGT	2 cut(s)	2151, 2198
Psp124BI	GAGCTC	2 cut(s)	456, 560
Psp6I	CCWGG	2 cut(s)	398, 2245
PspEI	GGTNACC	1 cut(s)	1934
PspGI	CCWGG	2 cut(s)	398, 2245
PspN4I	GGNNCC	2 cut(s)	239, 504
PstI	CTGCAG	1 cut(s)	2071
PstNI	CAGNNNCTG	1 cut(s)	872
PsuI	RGATCY	3 cut(s)	1627, 2053, 2288
PteI	GCGCGC	1 cut(s)	430
PvuII	CAGCTG	1 cut(s)	869
RsaI	GTAC	3 cut(s)	1179, 1230, 1730
RsaNI	GTAC	3 cut(s)	1178, 1229, 1729
RseI	CAYNNNNRTG	2 cut(s)	956, 1308
SacI	GAGCTC	2 cut(s)	456, 560
SalI	GTCGAC	1 cut(s)	548
SapI	GCTCTTC	2 cut(s)	565, 945
SaqAI	TTAA	6 cut(s)	624, 786, 897, 956, 1821, 2189
SchI	GAGTC	4 cut(s)	380, 1271, 1747, 2085
ScrFI	CCNGG	3 cut(s)	400, 1940, 2247
SduI	GDGCHC	3 cut(s)	456, 560, 2253
SfaNI	GCATC	8 cut(s)	643, 739, 964, 1200, 1548, 1759, 1897, 1939
SfcI	CTRYAG	2 cut(s)	2067, 2339
SfoI	GGCGCC	1 cut(s)	239
SfuI	TTCGAA	1 cut(s)	563
SmiMI	CAYNNNNRTG	2 cut(s)	956, 1308
SmlI	CTYRAG	2 cut(s)	2049, 2093
SmoI	CTYRAG	2 cut(s)	2049, 2093
SseBI	AGGCCT	1 cut(s)	612
SsiI	CCGC	8 cut(s)	277, 495, 500, 533, 995, 1058, 2098, 2335
SspDI	GGCGCC	1 cut(s)	237
SspI	AATATT	1 cut(s)	1975
SspMI	CTAG	7 cut(s)	608, 674, 824, 1016, 1689, 1805, 2241
SstI	GAGCTC	2 cut(s)	456, 560
StuI	AGGCCT	1 cut(s)	612
StyD4I	CCNGG	3 cut(s)	398, 1938, 2245
TaaI	ACNGT	3 cut(s)	319, 1869, 2255
TaiI	ACGT	5 cut(s)	444, 474, 483, 1591, 1850
TaqI	TCGA	8 cut(s)	384, 415, 549, 563, 715, 964, 1647, 1962
TatI	WGTACW	3 cut(s)	1177, 1228, 1728
TauI	GCSGC	3 cut(s)	535, 2101, 2338
TfiI	GAWTC	4 cut(s)	916, 1154, 1340, 1522
Tru1I	TTAA	6 cut(s)	624, 786, 897, 956, 1821, 2189
Tru9I	TTAA	6 cut(s)	624, 786, 897, 956, 1821, 2189
TscAI	CASTG	4 cut(s)	157, 575, 601, 2258
TseFI	GTSAC	1 cut(s)	1489
Tsp45I	GTSAC	1 cut(s)	1489
TspDTI	ATGAA	6 cut(s)	169, 786, 1005, 1514, 1633, 2172
TspRI	CASTG	4 cut(s)	157, 575, 601, 2258
XapI	RAATTY	6 cut(s)	91, 176, 813, 839, 1460, 1884
XceI	RCATGY	2 cut(s)	2155, 2202
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1977
XmiI	GTMKAC	3 cut(s)	549, 1864, 2028
XmnI	GAANNNNTTC	1 cut(s)	1668
XspI	CTAG	7 cut(s)	608, 674, 824, 1016, 1689, 1805, 2241

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.