Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0000306

Physical Location & Seq

Genomic Coordinates Forward (+)

41305158 .. 41312165

Gene Structure 7008 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00360700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGGAGCTGCCGAGGCGCCAAGATCAGAGCCAATCGGAGAGGAAGGGGCAGAAGCGGAAACTGGAAGAGGAAATCGGAGAGGAGCGAGAGATCACGGTGCAGCAGTCCGGCGACGCCAGAAAAGCCATACTGCTTCAGGTCGCCGAGCAGGTTCAAGTTCTCGACTCTTCTTTTTCCTGGAGCGAAGCTGATCGAAACGCTGCCAAGCGCGCCACTCACGTCCTCGCCGAGCTCGCCAAGAACGAGGACGTAGTGAACGTCATCGTTGAAGGCGGTGCGGTTCCGGCTTTGGTGAAACATCTGCAAGCGCCGCCGTGCAGCGAGGTCGACCGGAGCTCTTCGAAGCACTGCGAACACGAGGTTGAGAAGGGCAGTGCCTTTGCACTAGGCCTTCTTGCCGTTAAGCCCGAGCATCAACAACTCATTGTTGACAATGGTGCATTGTCTCATCTAGTAGATTTGTTGAAGAGGCACAAGGATAGTCATGTAACTCGACCTTTGTATAGCGTCATTCGTAGAGCTGCTGATGCCATCACCAATCTCGCTCATGAAAACAGCAGCATTAAAACCCGTGTCAGGATAGAAGGTGGAATTCCACCTCTAGTTGAGTTGCTTGAATTTGCCGATACAAAGGTGCAAAGAGCAGCTGCTGGAGCGCTACGAACCCTCGCATTTAAAAATGATGAGAATAAGAATCAGATTGTTGAATGCAATGCTCTTCCTACCCTCATTTTAATGCTTCGATCTGAAGATGCTGCTATACATTACGAAGCGGTTGGTGTAATTGGAAATCTAGTTCACTCTTCTCCAAACATAAAGAAAGAGGTTCTTCTTGCGGGAGCTTTACAACCTGTTATTGGATTGCTTAGTTCCTGCTGCTTTGAGAGCCAAAGAGAGGCAGCTTTGCTACTTGGACAATTTGCTGCAACTGATTCAGATTGCAAGGTTCACATTGTACAGAGGGGTGCCGTCCGACCTTTGATTGAGATGCTTCAATCCCCAGATGTACAACTCAGGGAGATGTCAGCTTTTGCTTTGGGGAGGTTGGCACAGGACTCACACAACCAAGCTGGTATTGCTCATAATGGTGGTTTATTGCCATTGTTGAAACTTCTGGATTCAAAAAATGGGTCTCTGCAACACAATGCTGCATTTACCCTTTATGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTTGGTGGTGTTCAGAAGCTGCAGGATGGAGAATTTATTTTCCAAGCTACAAAGGATTGTGTGACCAAAACATTGAAAAGATTAGAGGAGAAGATTCATGCACGAGTTTTGTCGCATTTGTTATACTTGATGCGTGTAGCAGAGAGAAATGTCCAAAGACGTGTTGCTTTGGCTTTTGCTCATCTTTGCTCCCCAGAGGATCTCAGAACCATTTTCATCGATAACAATGGCACGTCACTGTCTCTGTATTTCAAATTGTATTTTGTCAGTTTGGAATTGCTTCTTGGGCTTCTTGGTTCTAGTAGCCCCAAACAGCAGCTTGATGGTGCTATGGCTCTGTACAAGTTGGCCAACAAAGCCATGACTCTTTCTCCTGTGGATGCAGCTCCTCCATCTCCAACTCCACAGGTTTATCTAGGGGAGCAGTATGTAAACAACCCTACGCTGTCTGATGTTACGTTTTTAGTTGAAGGTAGACGGTTCTATGCTCACAGAATTTGCCTGCTTGCTTCTTCAGATGCTTTTCGTGCAATGTTTGATGGTGGTTACCGGGAGAAGGATGCAAGGGACATTGAAATACCAAATATTAGATGGGAGGTTTTTGAGTTGATGATGAGATTTATATACACCGGATCAGTAGACATTACTTTGGATATTGCTCAAGATCTCCTCAGAGCTGCAGATCAGTATCTTTTGGAGGGACTCAAGCGGCTTTGTGAGTATTCAATAGCACAGGACATATCTTTGGAGAATGTTTCAAACATGTATGAACTTTCAGAAGCCTTCCATGCAATGTCATTAAGGCAAACATGTATTTTGTTTATCTTGGAGCAGTTCGAAAAATTGAGTGCTAGACCAGGGCACTGTGAACTGATCAAGAATATATTGGATGAGATCAGATCTTACTTTACTAAAGCACTCACTAAGCCTAACCCACATAACTTGCGGCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0010029 GO:0010033 GO:0010187 GO:0016020 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0050789 GO:0050793 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0065007 GO:0071944 GO:0097305 GO:1900140 GO:1901700 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm BTB

Protein Analysis

719

Amino Acids

80.03

Weight (kDa)

6.15

Isoelectric Point (pI)

49.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	169 - 383	5.8e-16	ARMC5
ARM_PUB	PF25598	174 - 409	1.2e-06	Plant U-box protein ARM repeat region
Arm	PF00514	192 - 224	5.5e-07	Armadillo/beta-catenin-like repeat
Arm	PF00514	227 - 266	1.9e-07	Armadillo/beta-catenin-like repeat
BTB	PF00651	547 - 647	3.5e-25	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19330
fragaria_vesca	FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica	MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica	Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis	pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis	RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata	RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora	Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii	Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa	Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha	Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana	Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	139
AccB1I	GGYRCC	2 cut(s)	15, 965
AccI	GTMKAC	3 cut(s)	327, 1681, 1845
AccII	CGCG	1 cut(s)	210
AciI	CCGC	8 cut(s)	55, 273, 278, 311, 773, 836, 1915, 2152
AclWI	GGATC	2 cut(s)	1413, 1846
AcoI	YGGCCR	1 cut(s)	1554
AcsI	RAATTY	4 cut(s)	591, 617, 1238, 1701
AcuI	CTGAAG	3 cut(s)	119, 768, 1704
AcyI	GRCGYC	2 cut(s)	16, 114
AfaI	GTAC	3 cut(s)	957, 1008, 1547
AfeI	AGCGCT	1 cut(s)	657
AfiI	CCNNNNNNNGG	4 cut(s)	576, 857, 895, 1762
AflIII	ACRYGT	3 cut(s)	1366, 1968, 2015
AjiI	CACGTC	3 cut(s)	220, 1367, 1440
AjnI	CCWGG	2 cut(s)	176, 2062
AjuI	GAANNNNNNNTTGG	2 cut(s)	1473, 1505
AloI	GAACNNNNNNTCC	2 cut(s)	780, 812
Alw21I	GWGCWC	2 cut(s)	234, 338
Alw26I	GTCTC	3 cut(s)	450, 1137, 1452
AlwI	GGATC	2 cut(s)	1413, 1846
AlwNI	CAGNNNCTG	2 cut(s)	650, 1225
Ama87I	CYCGRG	1 cut(s)	407
Aor51HI	AGCGCT	1 cut(s)	657
AoxI	GGCC	3 cut(s)	388, 1165, 1554
ApoI	RAATTY	4 cut(s)	591, 617, 1238, 1701
ArsI	GACNNNNNNTTYG	2 cut(s)	1115, 1147
Asp700I	GAANNNNTTC	1 cut(s)	1485
AspLEI	GCGC	5 cut(s)	18, 210, 212, 310, 658
AsuC2I	CCSGG	1 cut(s)	1757
AsuHPI	GGTGA	2 cut(s)	304, 526
AsuII	TTCGAA	2 cut(s)	341, 2043
AvaI	CYCGRG	1 cut(s)	407
BaeGI	GKGCMC	1 cut(s)	2070
BaeI	ACNNNNGTAYC	2 cut(s)	618, 651
BalI	TGGCCA	1 cut(s)	1556
BanI	GGYRCC	2 cut(s)	15, 965
BanII	GRGCYC	2 cut(s)	234, 338
BauI	CACGAG	2 cut(s)	356, 1308
Bbv12I	GWGCWC	2 cut(s)	234, 338
BccI	CCATC	6 cut(s)	539, 1226, 1523, 1606, 1739, 1791
BceAI	ACGGC	3 cut(s)	298, 383, 953
BcgI	CGANNNNNNTGC	2 cut(s)	307, 341
BciT130I	CCWGG	2 cut(s)	178, 2064
BclI	TGATCA	1 cut(s)	2079
BcnI	CCSGG	1 cut(s)	1757
BcoDI	GTCTC	3 cut(s)	450, 1137, 1452
BfaI	CTAG	7 cut(s)	386, 452, 602, 794, 1506, 1622, 2058
BfmI	CTRYAG	3 cut(s)	1226, 1884, 2156
BfoI	RGCGCY	3 cut(s)	19, 311, 659
BfuAI	ACCTGC	1 cut(s)	139
BglII	AGATCT	2 cut(s)	1870, 2105
Bme1390I	CCNGG	3 cut(s)	178, 1757, 2064
BmeT110I	CYCGRG	1 cut(s)	407
BmgBI	CACGTC	3 cut(s)	220, 1367, 1440
BmiI	GGNNCC	3 cut(s)	17, 282, 967
BmrFI	CCNGG	3 cut(s)	178, 1757, 2064
BmsI	GCATC	8 cut(s)	421, 517, 742, 978, 1326, 1576, 1714, 1756
BpmI	CTGGAG	2 cut(s)	199, 672
Bpu14I	TTCGAA	2 cut(s)	341, 2043
BpuEI	CTTGAG	2 cut(s)	1851, 1895
BpuMI	CCSGG	1 cut(s)	1757
Bsa29I	ATCGAT	1 cut(s)	1425
BsaBI	GATNNNNATC	1 cut(s)	1893
BsaHI	GRCGYC	2 cut(s)	16, 114
BsaI	GGTCTC	1 cut(s)	1137
BsaJI	CCNNGG	2 cut(s)	11, 2063
BsaWI	WCCGGW	2 cut(s)	330, 1835
BsaXI	ACNNNNNCTCC	2 cut(s)	1561, 1591
Bsc4I	CCNNNNNNNGG	4 cut(s)	576, 857, 895, 1762
Bse1I	ACTGG	1 cut(s)	66
Bse3DI	GCAATG	3 cut(s)	718, 1743, 2004
Bse8I	GATNNNNATC	1 cut(s)	1893
BseBI	CCWGG	2 cut(s)	178, 2064
BseCI	ATCGAT	1 cut(s)	1425
BseDI	CCNNGG	2 cut(s)	11, 2063
BseGI	GGATG	4 cut(s)	1237, 1591, 1771, 2101
BseJI	GATNNNNATC	1 cut(s)	1893
BseLI	CCNNNNNNNGG	4 cut(s)	576, 857, 895, 1762
BseMI	GCAATG	3 cut(s)	718, 1743, 2004
BseMII	CTCAG	3 cut(s)	1027, 1423, 1891
BseNI	ACTGG	1 cut(s)	66
BsePI	GCGCGC	1 cut(s)	208
BseRI	GAGGAG	4 cut(s)	95, 1307, 1584, 1865
BseSI	GKGCMC	1 cut(s)	2070
BsgI	GTGCAG	2 cut(s)	119, 337
Bsh1236I	CGCG	1 cut(s)	210
Bsh1285I	CGRYCG	1 cut(s)	331
BshFI	GGCC	3 cut(s)	390, 1167, 1556
BshNI	GGYRCC	2 cut(s)	15, 965
BshVI	ATCGAT	1 cut(s)	1425
BsiEI	CGRYCG	1 cut(s)	331
BsiHKAI	GWGCWC	2 cut(s)	234, 338
BsiHKCI	CYCGRG	1 cut(s)	407
BsiSI	CCGG	5 cut(s)	108, 284, 331, 1756, 1836
BslFI	GGGAC	2 cut(s)	1787, 1920
BslI	CCNNNNNNNGG	4 cut(s)	576, 857, 895, 1762
BsmAI	GTCTC	3 cut(s)	450, 1137, 1452
BsmFI	GGGAC	2 cut(s)	1787, 1920
BsmI	GAATGC	1 cut(s)	713
BsnI	GGCC	3 cut(s)	390, 1167, 1556
Bso31I	GGTCTC	1 cut(s)	1137
BsoBI	CYCGRG	1 cut(s)	407
Bsp119I	TTCGAA	2 cut(s)	341, 2043
Bsp1286I	GDGCHC	3 cut(s)	234, 338, 2070
Bsp1407I	TGTACA	3 cut(s)	955, 1006, 1545
BspACI	CCGC	8 cut(s)	55, 273, 278, 311, 773, 836, 1915, 2152
BspANI	GGCC	3 cut(s)	390, 1167, 1556
BspCNI	CTCAG	3 cut(s)	1026, 1422, 1890
BspDI	ATCGAT	1 cut(s)	1425
BspFNI	CGCG	1 cut(s)	210
BspHI	TCATGA	1 cut(s)	547
BspLI	GGNNCC	3 cut(s)	17, 282, 967
BspMAI	CTGCAG	2 cut(s)	1230, 1888
BspMI	ACCTGC	1 cut(s)	139
BspPI	GGATC	2 cut(s)	1413, 1846
BspQI	GCTCTTC	2 cut(s)	343, 723
BspT104I	TTCGAA	2 cut(s)	341, 2043
BspT107I	GGYRCC	2 cut(s)	15, 965
BspTNI	GGTCTC	1 cut(s)	1137
BsrDI	GCAATG	3 cut(s)	718, 1743, 2004
BsrGI	TGTACA	3 cut(s)	955, 1006, 1545
BsrI	ACTGG	1 cut(s)	66
BssECI	CCNNGG	2 cut(s)	11, 2063
BssHII	GCGCGC	1 cut(s)	208
BssNI	GRCGYC	2 cut(s)	16, 114
BssSI	CACGAG	2 cut(s)	356, 1308
Bst2BI	CACGAG	2 cut(s)	356, 1308
Bst2UI	CCWGG	2 cut(s)	178, 2064
Bst4CI	ACNGT	4 cut(s)	97, 1446, 1686, 2072
Bst6I	CTCTTC	6 cut(s)	60, 172, 343, 461, 723, 808
BstACI	GRCGYC	2 cut(s)	16, 114
BstAUI	TGTACA	3 cut(s)	955, 1006, 1545
BstBI	TTCGAA	2 cut(s)	341, 2043
BstC8I	GCNNGC	5 cut(s)	210, 234, 306, 1709, 1713
BstDEI	CTNAG	5 cut(s)	866, 1013, 1409, 1877, 2130
BstEII	GGTNACC	1 cut(s)	1751
BstF5I	GGATG	4 cut(s)	1237, 1591, 1771, 2101
BstFNI	CGCG	1 cut(s)	210
BstH2I	RGCGCY	3 cut(s)	19, 311, 659
BstHHI	GCGC	5 cut(s)	18, 210, 212, 310, 658
BstMAI	GTCTC	3 cut(s)	450, 1137, 1452
BstMCI	CGRYCG	1 cut(s)	331
BstNI	CCWGG	2 cut(s)	178, 2064
BstNSI	RCATGY	2 cut(s)	1972, 2019
BstPI	GGTNACC	1 cut(s)	1751
BstSCI	CCNGG	3 cut(s)	176, 1755, 2062
BstSFI	CTRYAG	3 cut(s)	1226, 1884, 2156
BstSLI	GKGCMC	1 cut(s)	2070
BstUI	CGCG	1 cut(s)	210
BstX2I	RGATCY	3 cut(s)	1405, 1870, 2105
BstYI	RGATCY	3 cut(s)	1405, 1870, 2105
Bsu15I	ATCGAT	1 cut(s)	1425
BsuRI	GGCC	3 cut(s)	390, 1167, 1556
BsuTUI	ATCGAT	1 cut(s)	1425
BtrI	CACGTC	3 cut(s)	220, 1367, 1440
BtsCI	GGATG	4 cut(s)	1237, 1591, 1771, 2101
BtsI	GCAGTG	2 cut(s)	346, 379
BtsIMutI	CAGTG	4 cut(s)	346, 379, 1442, 2068
BveI	ACCTGC	1 cut(s)	139
Cac8I	GCNNGC	5 cut(s)	210, 234, 306, 1709, 1713
CaiI	CAGNNNCTG	2 cut(s)	650, 1225
CciI	TCATGA	1 cut(s)	547
CfoI	GCGC	5 cut(s)	18, 210, 212, 310, 658
ClaI	ATCGAT	1 cut(s)	1425
CseI	GACGC	2 cut(s)	122, 496
Csp6I	GTAC	3 cut(s)	956, 1007, 1546
CspCI	CAANNNNNGTGG	1 cut(s)	2130
CviAII	CATG	7 cut(s)	485, 548, 1304, 1567, 1969, 1994, 2016
CviQI	GTAC	3 cut(s)	956, 1007, 1546
DdeI	CTNAG	5 cut(s)	866, 1013, 1409, 1877, 2130
DinI	GGCGCC	1 cut(s)	17
DraI	TTTAAA	1 cut(s)	676
EaeI	YGGCCR	1 cut(s)	1554
Eam1104I	CTCTTC	6 cut(s)	60, 172, 343, 461, 723, 808
EarI	CTCTTC	6 cut(s)	60, 172, 343, 461, 723, 808
Ecl136II	GAGCTC	2 cut(s)	232, 336
Eco147I	AGGCCT	1 cut(s)	390
Eco24I	GRGCYC	2 cut(s)	234, 338
Eco31I	GGTCTC	1 cut(s)	1137
Eco47III	AGCGCT	1 cut(s)	657
Eco53kI	GAGCTC	2 cut(s)	232, 336
Eco57I	CTGAAG	3 cut(s)	119, 768, 1704
Eco88I	CYCGRG	1 cut(s)	407
Eco91I	GGTNACC	1 cut(s)	1751
EcoICRI	GAGCTC	2 cut(s)	232, 336
EcoO65I	GGTNACC	1 cut(s)	1751
EcoRI	GAATTC	1 cut(s)	591
EcoRII	CCWGG	2 cut(s)	176, 2062
EcoT38I	GRGCYC	2 cut(s)	234, 338
EgeI	GGCGCC	1 cut(s)	17
EheI	GGCGCC	1 cut(s)	17
FaeI	CATG	7 cut(s)	488, 551, 1307, 1570, 1972, 1997, 2019
FalI	AAGNNNNNCTT	2 cut(s)	813, 845
FaqI	GGGAC	2 cut(s)	1787, 1920
FatI	CATG	7 cut(s)	484, 547, 1303, 1566, 1968, 1993, 2015
FauI	CCCGC	1 cut(s)	829
FbaI	TGATCA	1 cut(s)	2079
FblI	GTMKAC	3 cut(s)	327, 1681, 1845
FokI	GGATG	4 cut(s)	1244, 1598, 1778, 2108
FriOI	GRGCYC	2 cut(s)	234, 338
FspBI	CTAG	7 cut(s)	386, 452, 602, 794, 1506, 1622, 2058
GlaI	GCGC	5 cut(s)	17, 209, 211, 309, 657
GsuI	CTGGAG	2 cut(s)	199, 672
HaeII	RGCGCY	3 cut(s)	19, 311, 659
HaeIII	GGCC	3 cut(s)	390, 1167, 1556
HapII	CCGG	5 cut(s)	108, 284, 331, 1756, 1836
HgaI	GACGC	2 cut(s)	122, 496
HhaI	GCGC	5 cut(s)	18, 210, 212, 310, 658
Hin1I	GRCGYC	2 cut(s)	16, 114
Hin1II	CATG	7 cut(s)	488, 551, 1307, 1570, 1972, 1997, 2019
Hin6I	GCGC	5 cut(s)	16, 208, 210, 308, 656
HinP1I	GCGC	5 cut(s)	16, 208, 210, 308, 656
HincII	GTYRAC	2 cut(s)	328, 430
HindII	GTYRAC	2 cut(s)	328, 430
HinfI	GANTC	8 cut(s)	164, 694, 932, 1055, 1118, 1300, 1570, 1908
HpaII	CCGG	5 cut(s)	108, 284, 331, 1756, 1836
HphI	GGTGA	2 cut(s)	304, 526
Hpy166II	GTNNAC	9 cut(s)	256, 328, 430, 799, 949, 1639, 1682, 1846, 2075
Hpy188III	TCNNGA	6 cut(s)	161, 548, 577, 1115, 1868, 2083
Hpy8I	GTNNAC	9 cut(s)	256, 328, 430, 799, 949, 1639, 1682, 1846, 2075
Hpy99I	CGWCG	1 cut(s)	116
HpyAV	CCTTC	8 cut(s)	37, 263, 361, 401, 578, 1670, 1756, 1999
HpyCH4III	ACNGT	4 cut(s)	97, 1446, 1686, 2072
HpyCH4IV	ACGT	6 cut(s)	219, 249, 258, 1366, 1439, 1664
HpyF3I	CTNAG	5 cut(s)	866, 1013, 1409, 1877, 2130
HpySE526I	ACGT	6 cut(s)	219, 249, 258, 1366, 1439, 1664
Hsp92I	GRCGYC	2 cut(s)	16, 114
Hsp92II	CATG	7 cut(s)	488, 551, 1307, 1570, 1972, 1997, 2019
HspAI	GCGC	5 cut(s)	16, 208, 210, 308, 656
KasI	GGCGCC	1 cut(s)	15
Ksp22I	TGATCA	1 cut(s)	2079
LguI	GCTCTTC	2 cut(s)	343, 723
LweI	GCATC	8 cut(s)	421, 517, 742, 978, 1326, 1576, 1714, 1756
MaeI	CTAG	7 cut(s)	386, 452, 602, 794, 1506, 1622, 2058
MaeII	ACGT	6 cut(s)	219, 249, 258, 1366, 1439, 1664
MaeIII	GTNAC	5 cut(s)	487, 1267, 1440, 1660, 1751
MflI	RGATCY	3 cut(s)	1405, 1870, 2105
MhlI	GDGCHC	3 cut(s)	234, 338, 2070
MlsI	TGGCCA	1 cut(s)	1556
MluCI	AATT	9 cut(s)	591, 617, 783, 917, 1238, 1460, 1481, 1701, 2048
MluNI	TGGCCA	1 cut(s)	1556
Mly113I	GGCGCC	1 cut(s)	16
MlyI	GAGTC	4 cut(s)	158, 1049, 1564, 1902
MmeI	TCCRAC	2 cut(s)	997, 1628
Mox20I	TGGCCA	1 cut(s)	1556
MroXI	GAANNNNTTC	1 cut(s)	1485
MscI	TGGCCA	1 cut(s)	1556
MseI	TTAA	5 cut(s)	402, 564, 675, 734, 2006
MslI	CAYNNNNRTG	2 cut(s)	734, 1086
Msp20I	TGGCCA	1 cut(s)	1556
MspA1I	CMGCKG	1 cut(s)	647
MspI	CCGG	5 cut(s)	108, 284, 331, 1756, 1836
MspR9I	CCNGG	3 cut(s)	178, 1757, 2064
Mva1269I	GAATGC	1 cut(s)	713
MvaI	CCWGG	2 cut(s)	178, 2064
MvnI	CGCG	1 cut(s)	210
NarI	GGCGCC	1 cut(s)	16
NciI	CCSGG	1 cut(s)	1757
NlaIII	CATG	7 cut(s)	488, 551, 1307, 1570, 1972, 1997, 2019
NlaIV	GGNNCC	3 cut(s)	17, 282, 967
NmeAIII	GCCGAG	3 cut(s)	36, 169, 253
NmuCI	GTSAC	2 cut(s)	1267, 1440
NspI	RCATGY	2 cut(s)	1972, 2019
NspV	TTCGAA	2 cut(s)	341, 2043
PagI	TCATGA	1 cut(s)	547
PauI	GCGCGC	1 cut(s)	208
PceI	AGGCCT	1 cut(s)	390
PciI	ACATGT	2 cut(s)	1968, 2015
PciSI	GCTCTTC	2 cut(s)	343, 723
PcsI	WCGNNNNNNNCGW	3 cut(s)	225, 240, 255
PctI	GAATGC	1 cut(s)	713
PdmI	GAANNNNTTC	1 cut(s)	1485
PfeI	GAWTC	4 cut(s)	694, 932, 1118, 1300
PfoI	TCCNGGA	1 cut(s)	176
PleI	GAGTC	4 cut(s)	158, 1049, 1564, 1902
PluTI	GGCGCC	1 cut(s)	19
PpsI	GAGTC	4 cut(s)	158, 1049, 1564, 1902
PscI	ACATGT	2 cut(s)	1968, 2015
Psp124BI	GAGCTC	2 cut(s)	234, 338
Psp6I	CCWGG	2 cut(s)	176, 2062
PspEI	GGTNACC	1 cut(s)	1751
PspGI	CCWGG	2 cut(s)	176, 2062
PspN4I	GGNNCC	3 cut(s)	17, 282, 967
PstI	CTGCAG	2 cut(s)	1230, 1888
PstNI	CAGNNNCTG	2 cut(s)	650, 1225
PsuI	RGATCY	3 cut(s)	1405, 1870, 2105
PteI	GCGCGC	1 cut(s)	208
PvuII	CAGCTG	1 cut(s)	647
RsaI	GTAC	3 cut(s)	957, 1008, 1547
RsaNI	GTAC	3 cut(s)	956, 1007, 1546
RseI	CAYNNNNRTG	2 cut(s)	734, 1086
SacI	GAGCTC	2 cut(s)	234, 338
SalI	GTCGAC	1 cut(s)	326
SapI	GCTCTTC	2 cut(s)	343, 723
SaqAI	TTAA	5 cut(s)	402, 564, 675, 734, 2006
SchI	GAGTC	4 cut(s)	158, 1049, 1564, 1902
ScrFI	CCNGG	3 cut(s)	178, 1757, 2064
SduI	GDGCHC	3 cut(s)	234, 338, 2070
SfaNI	GCATC	8 cut(s)	421, 517, 742, 978, 1326, 1576, 1714, 1756
SfcI	CTRYAG	3 cut(s)	1226, 1884, 2156
SfoI	GGCGCC	1 cut(s)	17
SfuI	TTCGAA	2 cut(s)	341, 2043
SmiMI	CAYNNNNRTG	2 cut(s)	734, 1086
SmlI	CTYRAG	2 cut(s)	1866, 1910
SmoI	CTYRAG	2 cut(s)	1866, 1910
Sse9I	AATT	9 cut(s)	591, 617, 783, 917, 1238, 1460, 1481, 1701, 2048
SseBI	AGGCCT	1 cut(s)	390
SsiI	CCGC	8 cut(s)	55, 273, 278, 311, 773, 836, 1915, 2152
SspDI	GGCGCC	1 cut(s)	15
SspI	AATATT	1 cut(s)	1792
SspMI	CTAG	7 cut(s)	386, 452, 602, 794, 1506, 1622, 2058
SstI	GAGCTC	2 cut(s)	234, 338
StuI	AGGCCT	1 cut(s)	390
StyD4I	CCNGG	3 cut(s)	176, 1755, 2062
TaaI	ACNGT	4 cut(s)	97, 1446, 1686, 2072
TaiI	ACGT	6 cut(s)	222, 252, 261, 1369, 1442, 1667
TaqI	TCGA	8 cut(s)	162, 193, 327, 341, 493, 742, 1425, 2043
TasI	AATT	9 cut(s)	591, 617, 783, 917, 1238, 1460, 1481, 1701, 2048
TatI	WGTACW	3 cut(s)	955, 1006, 1545
TauI	GCSGC	3 cut(s)	313, 1918, 2155
TfiI	GAWTC	4 cut(s)	694, 932, 1118, 1300
Tru1I	TTAA	5 cut(s)	402, 564, 675, 734, 2006
Tru9I	TTAA	5 cut(s)	402, 564, 675, 734, 2006
TscAI	CASTG	4 cut(s)	353, 379, 1449, 2075
TseFI	GTSAC	2 cut(s)	1267, 1440
Tsp45I	GTSAC	2 cut(s)	1267, 1440
TspDTI	ATGAA	4 cut(s)	564, 1292, 1411, 1989
TspRI	CASTG	4 cut(s)	353, 379, 1449, 2075
XapI	RAATTY	4 cut(s)	591, 617, 1238, 1701
XceI	RCATGY	2 cut(s)	1972, 2019
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1794
XmiI	GTMKAC	3 cut(s)	327, 1681, 1845
XmnI	GAANNNNTTC	1 cut(s)	1485
XspI	CTAG	7 cut(s)	386, 452, 602, 794, 1506, 1622, 2058

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.