Prupe.1G154900_v2.0.a1

carboxylic ester hydrolase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000306
Physical Location & Seq
Reverse (-)
12225945 .. 12226949
1005 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G154900.1

Sequence Viewer

Length: 939 bp
ATGGCTTCCACTTCAACCACCAAAAAAGAAATAGCCTCAGAGCTCCTTCCCCTCATCAGAGTCTACAAAGATGGCACAGTGGAACGCCTCTGGGGCTCTCCTTATGTGCCCCCATGTCCTCATGACCCACAAACCAACGTCTCCTCCAAAGACATCACCATCTCACACAACCCCACTATCTCAGCTCGCCTCTTCCTCCCTCAAAACCAAATATACCAAAAACCCCAACACCTTCTCCCCATCTTGGTTTACTTCCACGGTGGTGGGTTTTGCTTTGAATCCGCCTTCTCATCTGACCACCACCGTCTCCTCAACCGGTTGGTCTCACAAGCCCAAGTCCTCGCCGTCTCCGTTGAGTACAGGCTTGCCCCAGAAAACCCACTTCCCAATTGTTATCAAGATTGCTGGGATGCTCTTCAATGGGTCTCTTCTCACAGAACCCACAAAGAATTAGATGCTAACAATACTAAGAAAGAGCCATGGCTGGTCAATTATGGCAATTTTGATAAATTGTACATAGGTGGTGACACCATGAAGGCAGGGGTTGAGAGACTGTGTGGGGATGTGAAAATTCTAGGGGCATTTATGTCACATCTTTATTTCTTGGGATCCAAGCCAATTGGGTCAGAGCCTAAAGTTGAAGACTTTGAGAAGTGGCTGCCTTGTAAAGTTTGGAAATTTTTGTACCCATCAGCTCCTGGAGGGATTGATAATCCGATGGTCAATCCGGTGGGGGCGGGTGCACCAAGCCTGGCTGGACTCGGGTGCCCTCGAATGCTCGTGTGTGTTTCTAGCAAGGATGAGTTGAGTGATCGAGGTGTTGGAGAGGCGGAGGTGTTTGAAGTGGAAGGAGAGGAACATGCTTTTCACATCTTGAGTGAGGCTGAGACTGAGAATGTCAAGATTATGTTAGAACGCTTGGCTTCTTTTCTTGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0008150 GO:0008152 GO:0009056 GO:0016787 GO:0016788 GO:0044424 GO:0044444 GO:0044464 GO:0052689
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

313

Amino Acids

34.76

Weight (kDa)

5.78

Isoelectric Point (pI)

33.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000306)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19330
fragaria_vesca FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 765
AccI GTMKAC 1 cut(s) 63
AciI CCGC 3 cut(s) 282, 737, 830
AclWI GGATC 2 cut(s) 603, 616
AcsI RAATTY 2 cut(s) 570, 677
AfaI GTAC 3 cut(s) 359, 515, 686
AfiI CCNNNNNNNGG 1 cut(s) 244
AgeI ACCGGT 1 cut(s) 315
AgsI TTSAA 5 cut(s) 15, 278, 419, 641, 842
AjnI CCWGG 2 cut(s) 697, 750
AleI CACNNNNGTG 1 cut(s) 261
AluBI AGCT 3 cut(s) 43, 185, 695
AluI AGCT 3 cut(s) 43, 185, 695
Alw21I GWGCWC 2 cut(s) 45, 745
Alw26I GTCTC 7 cut(s) 145, 311, 328, 352, 430, 544, 881
Alw44I GTGCAC 1 cut(s) 741
AlwI GGATC 2 cut(s) 603, 616
AlwNI CAGNNNCTG 1 cut(s) 698
Ama87I CYCGRG 1 cut(s) 761
ApaLI GTGCAC 1 cut(s) 741
ApeKI GCWGC 1 cut(s) 658
ApoI RAATTY 2 cut(s) 570, 677
AsiGI ACCGGT 1 cut(s) 315
AsuHPI GGTGA 2 cut(s) 148, 536
AvaI CYCGRG 1 cut(s) 761
BaeGI GKGCMC 3 cut(s) 111, 745, 770
BamHI GGATCC 1 cut(s) 608
BanI GGYRCC 1 cut(s) 765
BanII GRGCYC 2 cut(s) 45, 98
BauI CACGAG 1 cut(s) 779
BbsI GAAGAC 1 cut(s) 648
Bbv12I GWGCWC 2 cut(s) 45, 745
BbvI GCAGC 1 cut(s) 645
BccI CCATC 5 cut(s) 65, 167, 248, 697, 712
BceAI ACGGC 1 cut(s) 329
BciT130I CCWGG 2 cut(s) 699, 752
BcoDI GTCTC 7 cut(s) 145, 311, 328, 352, 430, 544, 881
BfaI CTAG 2 cut(s) 575, 792
BglI GCCNNNNNGGC 1 cut(s) 93
BisI GCNGC 1 cut(s) 659
BlsI GCNGC 1 cut(s) 660
Bme1390I CCNGG 2 cut(s) 699, 752
BmeT110I CYCGRG 1 cut(s) 761
BmiI GGNNCC 2 cut(s) 610, 767
BmrFI CCNGG 2 cut(s) 699, 752
BmsI GCATC 2 cut(s) 400, 445
BpiI GAAGAC 1 cut(s) 648
BpmI CTGGAG 1 cut(s) 720
BpuEI CTTGAG 1 cut(s) 895
BsaI GGTCTC 2 cut(s) 328, 430
BsaJI CCNNGG 2 cut(s) 256, 479
BsaWI WCCGGW 2 cut(s) 315, 727
BsaXI ACNNNNNCTCC 4 cut(s) 128, 158, 219, 249
Bsc4I CCNNNNNNNGG 1 cut(s) 244
Bse118I RCCGGY 1 cut(s) 315
BseBI CCWGG 2 cut(s) 699, 752
BseDI CCNNGG 2 cut(s) 256, 479
BseGI GGATG 3 cut(s) 415, 568, 805
BseLI CCNNNNNNNGG 1 cut(s) 244
BseMII CTCAG 4 cut(s) 51, 195, 876, 882
BseRI GAGGAG 2 cut(s) 133, 299
BseSI GKGCMC 3 cut(s) 111, 745, 770
BseXI GCAGC 1 cut(s) 645
BseYI CCCAGC 1 cut(s) 405
BshNI GGYRCC 1 cut(s) 765
BshTI ACCGGT 1 cut(s) 315
BsiHKAI GWGCWC 2 cut(s) 45, 745
BsiHKCI CYCGRG 1 cut(s) 761
BsiSI CCGG 2 cut(s) 316, 728
BslI CCNNNNNNNGG 1 cut(s) 244
BsmAI GTCTC 7 cut(s) 145, 311, 328, 352, 430, 544, 881
BsmBI CGTCTC 3 cut(s) 145, 311, 352
BsmI GAATGC 1 cut(s) 780
Bso31I GGTCTC 2 cut(s) 328, 430
BsoBI CYCGRG 1 cut(s) 761
Bsp1286I GDGCHC 5 cut(s) 45, 98, 111, 745, 770
Bsp1407I TGTACA 1 cut(s) 513
Bsp143I GATC 2 cut(s) 608, 811
Bsp19I CCATGG 1 cut(s) 479
BspACI CCGC 3 cut(s) 282, 737, 830
BspCNI CTCAG 4 cut(s) 50, 194, 877, 883
BspHI TCATGA 1 cut(s) 121
BspLI GGNNCC 2 cut(s) 610, 767
BspPI GGATC 2 cut(s) 603, 616
BspQI GCTCTTC 1 cut(s) 420
BspT107I GGYRCC 1 cut(s) 765
BspTNI GGTCTC 2 cut(s) 328, 430
BsrFI RCCGGY 1 cut(s) 315
BsrGI TGTACA 1 cut(s) 513
BssAI RCCGGY 1 cut(s) 315
BssECI CCNNGG 2 cut(s) 256, 479
BssMI GATC 2 cut(s) 608, 811
BssSI CACGAG 1 cut(s) 779
BssT1I CCWWGG 1 cut(s) 479
Bst2BI CACGAG 1 cut(s) 779
Bst2UI CCWGG 2 cut(s) 699, 752
Bst4CI ACNGT 4 cut(s) 79, 260, 305, 555
Bst6I CTCTTC 3 cut(s) 197, 420, 433
BstAUI TGTACA 1 cut(s) 513
BstC8I GCNNGC 2 cut(s) 187, 366
BstDEI CTNAG 5 cut(s) 37, 181, 468, 885, 891
BstDSI CCRYGG 2 cut(s) 256, 479
BstF5I GGATG 3 cut(s) 415, 568, 805
BstKTI GATC 2 cut(s) 611, 814
BstMAI GTCTC 7 cut(s) 145, 311, 328, 352, 430, 544, 881
BstMBI GATC 2 cut(s) 608, 811
BstMWI GCNNNNNNNGC 1 cut(s) 93
BstNI CCWGG 2 cut(s) 699, 752
BstNSI RCATGY 1 cut(s) 863
BstSCI CCNGG 2 cut(s) 697, 750
BstSLI GKGCMC 3 cut(s) 111, 745, 770
BstV1I GCAGC 1 cut(s) 645
BstV2I GAAGAC 1 cut(s) 648
BstX2I RGATCY 1 cut(s) 608
BstXI CCANNNNNNTGG 1 cut(s) 263
BstYI RGATCY 1 cut(s) 608
BtgI CCRYGG 2 cut(s) 256, 479
BtsCI GGATG 3 cut(s) 415, 568, 805
BtsIMutI CAGTG 1 cut(s) 84
Cac8I GCNNGC 2 cut(s) 187, 366
CaiI CAGNNNCTG 1 cut(s) 698
CciI TCATGA 1 cut(s) 121
Cfr10I RCCGGY 1 cut(s) 315
Csp6I GTAC 3 cut(s) 358, 514, 685
CspAI ACCGGT 1 cut(s) 315
CviAII CATG 5 cut(s) 114, 122, 480, 532, 860
CviQI GTAC 3 cut(s) 358, 514, 685
DdeI CTNAG 5 cut(s) 37, 181, 468, 885, 891
DpnI GATC 2 cut(s) 610, 813
DpnII GATC 2 cut(s) 608, 811
Eam1104I CTCTTC 3 cut(s) 197, 420, 433
EarI CTCTTC 3 cut(s) 197, 420, 433
EciI GGCGGA 2 cut(s) 271, 845
Ecl136II GAGCTC 1 cut(s) 43
Eco130I CCWWGG 1 cut(s) 479
Eco24I GRGCYC 2 cut(s) 45, 98
Eco31I GGTCTC 2 cut(s) 328, 430
Eco53kI GAGCTC 1 cut(s) 43
Eco88I CYCGRG 1 cut(s) 761
EcoICRI GAGCTC 1 cut(s) 43
EcoRII CCWGG 2 cut(s) 697, 750
EcoT14I CCWWGG 1 cut(s) 479
EcoT38I GRGCYC 2 cut(s) 45, 98
ErhI CCWWGG 1 cut(s) 479
Esp3I CGTCTC 3 cut(s) 145, 311, 352
FaeI CATG 5 cut(s) 117, 125, 483, 535, 863
FatI CATG 5 cut(s) 113, 121, 479, 531, 859
FauI CCCGC 1 cut(s) 730
FblI GTMKAC 1 cut(s) 63
Fnu4HI GCNGC 1 cut(s) 659
FokI GGATG 3 cut(s) 422, 575, 812
FriOI GRGCYC 2 cut(s) 45, 98
Fsp4HI GCNGC 1 cut(s) 659
FspBI CTAG 2 cut(s) 575, 792
GluI GCNGC 1 cut(s) 659
GsaI CCCAGC 1 cut(s) 409
GsuI CTGGAG 1 cut(s) 720
HapII CCGG 2 cut(s) 316, 728
Hin1II CATG 5 cut(s) 117, 125, 483, 535, 863
HinfI GANTC 3 cut(s) 60, 278, 759
HpaII CCGG 2 cut(s) 316, 728
HphI GGTGA 2 cut(s) 148, 536
Hpy166II GTNNAC 3 cut(s) 64, 250, 743
Hpy188I TCNGA 5 cut(s) 40, 59, 295, 628, 717
Hpy188III TCNNGA 4 cut(s) 122, 398, 874, 901
Hpy8I GTNNAC 3 cut(s) 64, 250, 743
HpyAV CCTTC 5 cut(s) 56, 242, 295, 529, 842
HpyCH4III ACNGT 4 cut(s) 79, 260, 305, 555
HpyCH4IV ACGT 1 cut(s) 138
HpyCH4V TGCA 1 cut(s) 743
HpyF10VI GCNNNNNNNGC 1 cut(s) 93
HpyF3I CTNAG 5 cut(s) 37, 181, 468, 885, 891
HpySE526I ACGT 1 cut(s) 138
Hsp92II CATG 5 cut(s) 117, 125, 483, 535, 863
Kzo9I GATC 2 cut(s) 608, 811
LguI GCTCTTC 1 cut(s) 420
LmnI GCTCC 2 cut(s) 48, 700
Lsp1109I GCAGC 1 cut(s) 645
LweI GCATC 2 cut(s) 400, 445
MaeI CTAG 2 cut(s) 575, 792
MaeII ACGT 1 cut(s) 138
MaeIII GTNAC 2 cut(s) 524, 588
MalI GATC 2 cut(s) 610, 813
MboI GATC 2 cut(s) 608, 811
MboII GAAGA 4 cut(s) 184, 407, 420, 653
MfeI CAATTG 2 cut(s) 388, 618
MflI RGATCY 1 cut(s) 608
MhlI GDGCHC 5 cut(s) 45, 98, 111, 745, 770
MluCI AATT 8 cut(s) 388, 449, 490, 499, 509, 570, 618, 677
MlyI GAGTC 2 cut(s) 69, 753
MmeI TCCRAC 1 cut(s) 802
MslI CAYNNNNRTG 1 cut(s) 261
MspI CCGG 2 cut(s) 316, 728
MspR9I CCNGG 2 cut(s) 699, 752
MunI CAATTG 2 cut(s) 388, 618
Mva1269I GAATGC 1 cut(s) 780
MvaI CCWGG 2 cut(s) 699, 752
MwoI GCNNNNNNNGC 1 cut(s) 93
NcoI CCATGG 1 cut(s) 479
NdeII GATC 2 cut(s) 608, 811
NlaIII CATG 5 cut(s) 117, 125, 483, 535, 863
NlaIV GGNNCC 2 cut(s) 610, 767
NmuCI GTSAC 2 cut(s) 524, 588
NspI RCATGY 1 cut(s) 863
OliI CACNNNNGTG 1 cut(s) 261
PagI TCATGA 1 cut(s) 121
PciSI GCTCTTC 1 cut(s) 420
PcsI WCGNNNNNNNCGW 1 cut(s) 348
PctI GAATGC 1 cut(s) 780
PfeI GAWTC 1 cut(s) 278
PfoI TCCNGGA 1 cut(s) 697
PinAI ACCGGT 1 cut(s) 315
PkrI GCNGC 1 cut(s) 660
PleI GAGTC 2 cut(s) 68, 753
PpsI GAGTC 2 cut(s) 68, 753
Psp124BI GAGCTC 1 cut(s) 45
Psp6I CCWGG 2 cut(s) 697, 750
PspFI CCCAGC 1 cut(s) 405
PspGI CCWGG 2 cut(s) 697, 750
PspN4I GGNNCC 2 cut(s) 610, 767
PstNI CAGNNNCTG 1 cut(s) 698
PsuI RGATCY 1 cut(s) 608
RsaI GTAC 3 cut(s) 359, 515, 686
RsaNI GTAC 3 cut(s) 358, 514, 685
RseI CAYNNNNRTG 1 cut(s) 261
SacI GAGCTC 1 cut(s) 45
SapI GCTCTTC 1 cut(s) 420
SatI GCNGC 1 cut(s) 659
Sau3AI GATC 2 cut(s) 608, 811
SchI GAGTC 2 cut(s) 69, 753
ScrFI CCNGG 2 cut(s) 699, 752
SduI GDGCHC 5 cut(s) 45, 98, 111, 745, 770
SetI ASST 8 cut(s) 45, 141, 187, 234, 523, 697, 820, 837
SfaNI GCATC 2 cut(s) 400, 445
SmiMI CAYNNNNRTG 1 cut(s) 261
SmlI CTYRAG 1 cut(s) 874
SmoI CTYRAG 1 cut(s) 874
Sse9I AATT 8 cut(s) 388, 449, 490, 499, 509, 570, 618, 677
SsiI CCGC 3 cut(s) 282, 737, 830
SspMI CTAG 2 cut(s) 575, 792
SstI GAGCTC 1 cut(s) 45
StyD4I CCNGG 2 cut(s) 697, 750
StyI CCWWGG 1 cut(s) 479
TaaI ACNGT 4 cut(s) 79, 260, 305, 555
TaiI ACGT 1 cut(s) 141
TaqI TCGA 2 cut(s) 772, 814
TasI AATT 8 cut(s) 388, 449, 490, 499, 509, 570, 618, 677
TatI WGTACW 2 cut(s) 357, 513
TfiI GAWTC 1 cut(s) 278
TscAI CASTG 1 cut(s) 84
TseFI GTSAC 2 cut(s) 524, 588
TseI GCWGC 1 cut(s) 658
Tsp45I GTSAC 2 cut(s) 524, 588
TspDTI ATGAA 1 cut(s) 548
TspGWI ACGGA 1 cut(s) 340
TspRI CASTG 1 cut(s) 84
VneI GTGCAC 1 cut(s) 741
XapI RAATTY 2 cut(s) 570, 677
XceI RCATGY 1 cut(s) 863
XmiI GTMKAC 1 cut(s) 63
XspI CTAG 2 cut(s) 575, 792
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.