Rh4DG204800

Arm repeat protein interacting with

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Forward (+)
39798951 .. 39805388
6438 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG204800.1

Sequence Viewer

Length: 1713 bp
ATGGAGCTGCCGAGGCGCCAAGATCAGAGCCAATCGGAGAGGAAGGGGCAGAAGCGGAAACTGGAAGAGGAAATCGGAGAGGAGCGAGAGATCACGGTGCAGCAGTCCGGCGACGCCAGAAAAGCCATACTGCTTCAGGTCGCCGAGCAGGTTCAAGTTCTCGACTCTTCTTTTTCCTGGAGCGAAGCTGATCGAAACGCTGCCAAGCGCGCCACTCACGTCCTCGCCGAGCTCGCCAAGAACGAGGACGTAGTGAACGTCATCGTTGAAGGCGGTGCGGTTCCGGCTTTGGTGAAACATCTGCAAGCGCCGCCGTGCAGCGAGGTAGACCGGAGCTCTTCGAAGCACTGCGAACACGAGGTTGAGAAGGGCAGTGCCTTTGCACTAGGCCTTCTTGCCGTTAAGCCCGAGCATCAACAACTCATTGTTGATAATGGTGCATTGTCTCATCTAGTAGATTTGTTGAAGAGGCACAAGGATAGTCATGTAACTCGACCTTTGTATAGCGTCATTCGTAGAGCTGCTGATGCCATCACCAATCTCGCTCATGAAAACAGCAGCATTAAAACCCGTGTCAGGATAGAAGGTGGAATTCCACCTCTAGTTGAGTTGCTTGAATTTGCCGATACAAAGGTGCAAAGAGCAGCTGCTGGAGCGCTACGAACCCTCGCATTTAAAAATGATGAGAATAAGAATCAGATTGTTGAATGCAATGCTCTTCCTACCCTCATTTTAATGCTTCGATCTGAAGATGCTGCTATACATTACGAAGCGGATAATGTGTCCGATTTTATTAGGGTTGGTGGTGTTCAGAAGTTGCAGGATGGAGAATTTATTTTCCAAGCTACAAAGGATTGTGTGACCAAAACATTGAAAAGATTAGAGGAGAAGATTCATGCACGAGTTTTGTCGCATTTGTTATACTTGATGCGTGTAGCAGAGAGAAATGTCCAAAGACGTGTTGCTTTGGCTTTTGCTCATCTTTGCTCCCCAGAGGATCTCAGAACCATTTTCATCGATAACAATGGTTTGGAATTGCTTCTTGGGCTTCTTGGTTCTAGTAGCCCCAAACAGCAGCTTGATGGTGCTATGGCTCTGTACAAGTTGGCCAACAAAGCCATGACTCTTTCTCCTGTGGATGCAGCTCCTCCATCTCCAACACCACAGGTTTATCTAGGGGAGCAGTATGTAAACAACCCTACGCTGTCCGATGTTACGTTTTTAGTTGAAGGTAGACGGTTCTATGCTCACAGAATTTGCCTGCTTGCTTCTTCAGATGCTTTTCGTGCAATGTTTGATGGTGGTTACCGGGAGAAGGATGCAAGGGACATCGAAATACCAAATATTAGATGGGAGGTTTTTGAGTTGATGATGAGATTTATATACACCGGATCAGTAGACATTACTTTGGATATTGCTCAAGATCTCCTCAGAGCTGCAGATCAGTATCTTTTGGAGGGACTCAAGCGGCTTTGTGAGTATTCAATAGCACAGGACATATCTTTGGAGAATGTTTCAAACATGTATGAACTTTCAGAAGCCTTCCATGCAATGTCATTAAGGCAAACATGTATTTTGTTTATCTTGGAGCAGTTCGAAAAATTGAGTGCTAGACCAGGGCACTGTGAACTGATCAAGAATATATTGGATGAGATCAGATCTTACTTTACTAAAGCACTCACTAAGCCTAACCCACATAACTTGCGGCTGTAG

Protein Analysis

570

Amino Acids

64.06

Weight (kDa)

6.06

Isoelectric Point (pI)

49.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_ARMC5 PF24768 169 - 356 6.1e-09 ARMC5
Arm PF00514 192 - 224 4.1e-07 Armadillo/beta-catenin-like repeat
BTB PF00651 398 - 498 2.4e-25 BTB/POZ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000306)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19330
fragaria_vesca FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 139
AccB1I GGYRCC 1 cut(s) 15
AccI GTMKAC 3 cut(s) 327, 1234, 1398
AccII CGCG 1 cut(s) 210
AciI CCGC 7 cut(s) 55, 273, 278, 311, 773, 1468, 1705
AclWI GGATC 2 cut(s) 1005, 1399
AcoI YGGCCR 1 cut(s) 1107
AcsI RAATTY 4 cut(s) 591, 617, 830, 1254
AcuI CTGAAG 3 cut(s) 119, 768, 1257
AcyI GRCGYC 2 cut(s) 16, 114
AfaI GTAC 1 cut(s) 1100
AfeI AGCGCT 1 cut(s) 657
AfiI CCNNNNNNNGG 2 cut(s) 576, 1315
AflIII ACRYGT 3 cut(s) 958, 1521, 1568
AgsI TTSAA 9 cut(s) 155, 269, 466, 617, 707, 874, 1229, 1485, 1518
AjiI CACGTC 2 cut(s) 220, 959
AjnI CCWGG 2 cut(s) 176, 1615
AjuI GAANNNNNNNTTGG 2 cut(s) 1026, 1058
Alw21I GWGCWC 2 cut(s) 234, 338
Alw26I GTCTC 1 cut(s) 450
AlwI GGATC 2 cut(s) 1005, 1399
AlwNI CAGNNNCTG 1 cut(s) 650
Ama87I CYCGRG 1 cut(s) 407
Aor51HI AGCGCT 1 cut(s) 657
AoxI GGCC 2 cut(s) 388, 1107
ApoI RAATTY 4 cut(s) 591, 617, 830, 1254
Asp700I GAANNNNTTC 1 cut(s) 1038
AspLEI GCGC 5 cut(s) 18, 210, 212, 310, 658
AsuC2I CCSGG 1 cut(s) 1310
AsuHPI GGTGA 2 cut(s) 304, 526
AsuII TTCGAA 2 cut(s) 341, 1596
AvaI CYCGRG 1 cut(s) 407
BaeGI GKGCMC 1 cut(s) 1623
BaeI ACNNNNGTAYC 2 cut(s) 618, 651
BalI TGGCCA 1 cut(s) 1109
BanI GGYRCC 1 cut(s) 15
BanII GRGCYC 2 cut(s) 234, 338
BauI CACGAG 2 cut(s) 356, 900
Bbv12I GWGCWC 2 cut(s) 234, 338
BccI CCATC 6 cut(s) 539, 818, 1076, 1159, 1292, 1344
BceAI ACGGC 2 cut(s) 298, 383
BciT130I CCWGG 2 cut(s) 178, 1617
BclI TGATCA 1 cut(s) 1632
BcnI CCSGG 1 cut(s) 1310
BcoDI GTCTC 1 cut(s) 450
BfaI CTAG 6 cut(s) 386, 452, 602, 1059, 1175, 1611
BfmI CTRYAG 2 cut(s) 1437, 1709
BfoI RGCGCY 3 cut(s) 19, 311, 659
BfuAI ACCTGC 1 cut(s) 139
BglII AGATCT 2 cut(s) 1423, 1658
Bme1390I CCNGG 3 cut(s) 178, 1310, 1617
BmeT110I CYCGRG 1 cut(s) 407
BmgBI CACGTC 2 cut(s) 220, 959
BmiI GGNNCC 2 cut(s) 17, 282
BmrFI CCNGG 3 cut(s) 178, 1310, 1617
BmsI GCATC 7 cut(s) 421, 517, 742, 918, 1129, 1267, 1309
BpmI CTGGAG 2 cut(s) 199, 672
Bpu14I TTCGAA 2 cut(s) 341, 1596
BpuEI CTTGAG 2 cut(s) 1404, 1448
BpuMI CCSGG 1 cut(s) 1310
Bsa29I ATCGAT 1 cut(s) 1017
BsaBI GATNNNNATC 1 cut(s) 1446
BsaHI GRCGYC 2 cut(s) 16, 114
BsaJI CCNNGG 2 cut(s) 11, 1616
BsaWI WCCGGW 2 cut(s) 330, 1388
BsaXI ACNNNNNCTCC 2 cut(s) 1114, 1144
Bsc4I CCNNNNNNNGG 2 cut(s) 576, 1315
Bse1I ACTGG 1 cut(s) 66
Bse3DI GCAATG 3 cut(s) 718, 1296, 1557
Bse8I GATNNNNATC 1 cut(s) 1446
BseBI CCWGG 2 cut(s) 178, 1617
BseCI ATCGAT 1 cut(s) 1017
BseDI CCNNGG 2 cut(s) 11, 1616
BseGI GGATG 4 cut(s) 829, 1144, 1324, 1654
BseJI GATNNNNATC 1 cut(s) 1446
BseLI CCNNNNNNNGG 2 cut(s) 576, 1315
BseMI GCAATG 3 cut(s) 718, 1296, 1557
BseMII CTCAG 2 cut(s) 1015, 1444
BseNI ACTGG 1 cut(s) 66
BsePI GCGCGC 1 cut(s) 208
BseRI GAGGAG 4 cut(s) 95, 899, 1137, 1418
BseSI GKGCMC 1 cut(s) 1623
BsgI GTGCAG 2 cut(s) 119, 337
Bsh1236I CGCG 1 cut(s) 210
BshFI GGCC 2 cut(s) 390, 1109
BshNI GGYRCC 1 cut(s) 15
BshVI ATCGAT 1 cut(s) 1017
BsiHKAI GWGCWC 2 cut(s) 234, 338
BsiHKCI CYCGRG 1 cut(s) 407
BsiSI CCGG 5 cut(s) 108, 284, 331, 1309, 1389
BslFI GGGAC 2 cut(s) 1340, 1473
BslI CCNNNNNNNGG 2 cut(s) 576, 1315
BsmAI GTCTC 1 cut(s) 450
BsmFI GGGAC 2 cut(s) 1340, 1473
BsmI GAATGC 1 cut(s) 713
BsnI GGCC 2 cut(s) 390, 1109
BsoBI CYCGRG 1 cut(s) 407
Bsp119I TTCGAA 2 cut(s) 341, 1596
Bsp1286I GDGCHC 3 cut(s) 234, 338, 1623
Bsp1407I TGTACA 1 cut(s) 1098
BspACI CCGC 7 cut(s) 55, 273, 278, 311, 773, 1468, 1705
BspANI GGCC 2 cut(s) 390, 1109
BspCNI CTCAG 2 cut(s) 1014, 1443
BspDI ATCGAT 1 cut(s) 1017
BspFNI CGCG 1 cut(s) 210
BspHI TCATGA 1 cut(s) 547
BspLI GGNNCC 2 cut(s) 17, 282
BspMAI CTGCAG 1 cut(s) 1441
BspMI ACCTGC 1 cut(s) 139
BspPI GGATC 2 cut(s) 1005, 1399
BspQI GCTCTTC 2 cut(s) 343, 723
BspT104I TTCGAA 2 cut(s) 341, 1596
BspT107I GGYRCC 1 cut(s) 15
BsrDI GCAATG 3 cut(s) 718, 1296, 1557
BsrGI TGTACA 1 cut(s) 1098
BsrI ACTGG 1 cut(s) 66
BssECI CCNNGG 2 cut(s) 11, 1616
BssHII GCGCGC 1 cut(s) 208
BssNI GRCGYC 2 cut(s) 16, 114
BssSI CACGAG 2 cut(s) 356, 900
Bst2BI CACGAG 2 cut(s) 356, 900
Bst2UI CCWGG 2 cut(s) 178, 1617
Bst4CI ACNGT 3 cut(s) 97, 1239, 1625
Bst6I CTCTTC 5 cut(s) 60, 172, 343, 461, 723
BstACI GRCGYC 2 cut(s) 16, 114
BstAUI TGTACA 1 cut(s) 1098
BstBI TTCGAA 2 cut(s) 341, 1596
BstC8I GCNNGC 5 cut(s) 210, 234, 306, 1262, 1266
BstDEI CTNAG 3 cut(s) 1001, 1430, 1683
BstEII GGTNACC 1 cut(s) 1304
BstF5I GGATG 4 cut(s) 829, 1144, 1324, 1654
BstFNI CGCG 1 cut(s) 210
BstH2I RGCGCY 3 cut(s) 19, 311, 659
BstHHI GCGC 5 cut(s) 18, 210, 212, 310, 658
BstMAI GTCTC 1 cut(s) 450
BstNI CCWGG 2 cut(s) 178, 1617
BstNSI RCATGY 2 cut(s) 1525, 1572
BstPI GGTNACC 1 cut(s) 1304
BstSCI CCNGG 3 cut(s) 176, 1308, 1615
BstSFI CTRYAG 2 cut(s) 1437, 1709
BstSLI GKGCMC 1 cut(s) 1623
BstUI CGCG 1 cut(s) 210
BstX2I RGATCY 3 cut(s) 997, 1423, 1658
BstYI RGATCY 3 cut(s) 997, 1423, 1658
Bsu15I ATCGAT 1 cut(s) 1017
BsuRI GGCC 2 cut(s) 390, 1109
BsuTUI ATCGAT 1 cut(s) 1017
BtrI CACGTC 2 cut(s) 220, 959
BtsCI GGATG 4 cut(s) 829, 1144, 1324, 1654
BtsI GCAGTG 2 cut(s) 346, 379
BtsIMutI CAGTG 3 cut(s) 346, 379, 1621
BveI ACCTGC 1 cut(s) 139
Cac8I GCNNGC 5 cut(s) 210, 234, 306, 1262, 1266
CaiI CAGNNNCTG 1 cut(s) 650
CciI TCATGA 1 cut(s) 547
CfoI GCGC 5 cut(s) 18, 210, 212, 310, 658
ClaI ATCGAT 1 cut(s) 1017
CseI GACGC 2 cut(s) 122, 496
Csp6I GTAC 1 cut(s) 1099
CspCI CAANNNNNGTGG 1 cut(s) 1683
CviAII CATG 7 cut(s) 485, 548, 896, 1120, 1522, 1547, 1569
CviQI GTAC 1 cut(s) 1099
DdeI CTNAG 3 cut(s) 1001, 1430, 1683
DinI GGCGCC 1 cut(s) 17
DraI TTTAAA 1 cut(s) 676
EaeI YGGCCR 1 cut(s) 1107
Eam1104I CTCTTC 5 cut(s) 60, 172, 343, 461, 723
EarI CTCTTC 5 cut(s) 60, 172, 343, 461, 723
Ecl136II GAGCTC 2 cut(s) 232, 336
Eco147I AGGCCT 1 cut(s) 390
Eco24I GRGCYC 2 cut(s) 234, 338
Eco47III AGCGCT 1 cut(s) 657
Eco53kI GAGCTC 2 cut(s) 232, 336
Eco57I CTGAAG 3 cut(s) 119, 768, 1257
Eco88I CYCGRG 1 cut(s) 407
Eco91I GGTNACC 1 cut(s) 1304
EcoICRI GAGCTC 2 cut(s) 232, 336
EcoO65I GGTNACC 1 cut(s) 1304
EcoRI GAATTC 1 cut(s) 591
EcoRII CCWGG 2 cut(s) 176, 1615
EcoT38I GRGCYC 2 cut(s) 234, 338
EgeI GGCGCC 1 cut(s) 17
EheI GGCGCC 1 cut(s) 17
FaeI CATG 7 cut(s) 488, 551, 899, 1123, 1525, 1550, 1572
FaqI GGGAC 2 cut(s) 1340, 1473
FatI CATG 7 cut(s) 484, 547, 895, 1119, 1521, 1546, 1568
FbaI TGATCA 1 cut(s) 1632
FblI GTMKAC 3 cut(s) 327, 1234, 1398
FokI GGATG 4 cut(s) 836, 1151, 1331, 1661
FriOI GRGCYC 2 cut(s) 234, 338
FspBI CTAG 6 cut(s) 386, 452, 602, 1059, 1175, 1611
GlaI GCGC 5 cut(s) 17, 209, 211, 309, 657
GsuI CTGGAG 2 cut(s) 199, 672
HaeII RGCGCY 3 cut(s) 19, 311, 659
HaeIII GGCC 2 cut(s) 390, 1109
HapII CCGG 5 cut(s) 108, 284, 331, 1309, 1389
HgaI GACGC 2 cut(s) 122, 496
HhaI GCGC 5 cut(s) 18, 210, 212, 310, 658
Hin1I GRCGYC 2 cut(s) 16, 114
Hin1II CATG 7 cut(s) 488, 551, 899, 1123, 1525, 1550, 1572
Hin6I GCGC 5 cut(s) 16, 208, 210, 308, 656
HinP1I GCGC 5 cut(s) 16, 208, 210, 308, 656
HinfI GANTC 5 cut(s) 164, 694, 892, 1123, 1461
HpaII CCGG 5 cut(s) 108, 284, 331, 1309, 1389
HphI GGTGA 2 cut(s) 304, 526
Hpy166II GTNNAC 6 cut(s) 256, 328, 1192, 1235, 1399, 1628
Hpy188III TCNNGA 5 cut(s) 161, 548, 577, 1421, 1636
Hpy8I GTNNAC 6 cut(s) 256, 328, 1192, 1235, 1399, 1628
Hpy99I CGWCG 1 cut(s) 116
HpyAV CCTTC 8 cut(s) 37, 263, 361, 401, 578, 1223, 1309, 1552
HpyCH4III ACNGT 3 cut(s) 97, 1239, 1625
HpyCH4IV ACGT 5 cut(s) 219, 249, 258, 958, 1217
HpyF3I CTNAG 3 cut(s) 1001, 1430, 1683
HpySE526I ACGT 5 cut(s) 219, 249, 258, 958, 1217
Hsp92I GRCGYC 2 cut(s) 16, 114
Hsp92II CATG 7 cut(s) 488, 551, 899, 1123, 1525, 1550, 1572
HspAI GCGC 5 cut(s) 16, 208, 210, 308, 656
KasI GGCGCC 1 cut(s) 15
Ksp22I TGATCA 1 cut(s) 1632
LguI GCTCTTC 2 cut(s) 343, 723
LmnI GCTCC 9 cut(s) 4, 82, 180, 333, 653, 992, 1150, 1180, 1588
LweI GCATC 7 cut(s) 421, 517, 742, 918, 1129, 1267, 1309
MaeI CTAG 6 cut(s) 386, 452, 602, 1059, 1175, 1611
MaeII ACGT 5 cut(s) 219, 249, 258, 958, 1217
MaeIII GTNAC 4 cut(s) 487, 859, 1213, 1304
MboII GAAGA 8 cut(s) 77, 159, 330, 478, 710, 761, 901, 1263
MflI RGATCY 3 cut(s) 997, 1423, 1658
MhlI GDGCHC 3 cut(s) 234, 338, 1623
MlsI TGGCCA 1 cut(s) 1109
MluCI AATT 6 cut(s) 591, 617, 830, 1034, 1254, 1601
MluNI TGGCCA 1 cut(s) 1109
Mly113I GGCGCC 1 cut(s) 16
MlyI GAGTC 3 cut(s) 158, 1117, 1455
MmeI TCCRAC 1 cut(s) 1181
Mox20I TGGCCA 1 cut(s) 1109
MroXI GAANNNNTTC 1 cut(s) 1038
MscI TGGCCA 1 cut(s) 1109
MseI TTAA 5 cut(s) 402, 564, 675, 734, 1559
MslI CAYNNNNRTG 1 cut(s) 734
Msp20I TGGCCA 1 cut(s) 1109
MspA1I CMGCKG 1 cut(s) 647
MspI CCGG 5 cut(s) 108, 284, 331, 1309, 1389
MspR9I CCNGG 3 cut(s) 178, 1310, 1617
Mva1269I GAATGC 1 cut(s) 713
MvaI CCWGG 2 cut(s) 178, 1617
MvnI CGCG 1 cut(s) 210
NarI GGCGCC 1 cut(s) 16
NciI CCSGG 1 cut(s) 1310
NlaIII CATG 7 cut(s) 488, 551, 899, 1123, 1525, 1550, 1572
NlaIV GGNNCC 2 cut(s) 17, 282
NmeAIII GCCGAG 3 cut(s) 36, 169, 253
NmuCI GTSAC 1 cut(s) 859
NspI RCATGY 2 cut(s) 1525, 1572
NspV TTCGAA 2 cut(s) 341, 1596
PagI TCATGA 1 cut(s) 547
PauI GCGCGC 1 cut(s) 208
PceI AGGCCT 1 cut(s) 390
PciI ACATGT 2 cut(s) 1521, 1568
PciSI GCTCTTC 2 cut(s) 343, 723
PcsI WCGNNNNNNNCGW 3 cut(s) 225, 240, 255
PctI GAATGC 1 cut(s) 713
PdmI GAANNNNTTC 1 cut(s) 1038
PfeI GAWTC 2 cut(s) 694, 892
PfoI TCCNGGA 1 cut(s) 176
PleI GAGTC 3 cut(s) 158, 1117, 1455
PluTI GGCGCC 1 cut(s) 19
PpsI GAGTC 3 cut(s) 158, 1117, 1455
PscI ACATGT 2 cut(s) 1521, 1568
Psp124BI GAGCTC 2 cut(s) 234, 338
Psp6I CCWGG 2 cut(s) 176, 1615
PspEI GGTNACC 1 cut(s) 1304
PspGI CCWGG 2 cut(s) 176, 1615
PspN4I GGNNCC 2 cut(s) 17, 282
PstI CTGCAG 1 cut(s) 1441
PstNI CAGNNNCTG 1 cut(s) 650
PsuI RGATCY 3 cut(s) 997, 1423, 1658
PteI GCGCGC 1 cut(s) 208
PvuII CAGCTG 1 cut(s) 647
RsaI GTAC 1 cut(s) 1100
RsaNI GTAC 1 cut(s) 1099
RseI CAYNNNNRTG 1 cut(s) 734
SacI GAGCTC 2 cut(s) 234, 338
SapI GCTCTTC 2 cut(s) 343, 723
SaqAI TTAA 5 cut(s) 402, 564, 675, 734, 1559
SchI GAGTC 3 cut(s) 158, 1117, 1455
ScrFI CCNGG 3 cut(s) 178, 1310, 1617
SduI GDGCHC 3 cut(s) 234, 338, 1623
SfaNI GCATC 7 cut(s) 421, 517, 742, 918, 1129, 1267, 1309
SfcI CTRYAG 2 cut(s) 1437, 1709
SfoI GGCGCC 1 cut(s) 17
SfuI TTCGAA 2 cut(s) 341, 1596
SmiMI CAYNNNNRTG 1 cut(s) 734
SmlI CTYRAG 2 cut(s) 1419, 1463
SmoI CTYRAG 2 cut(s) 1419, 1463
Sse9I AATT 6 cut(s) 591, 617, 830, 1034, 1254, 1601
SseBI AGGCCT 1 cut(s) 390
SsiI CCGC 7 cut(s) 55, 273, 278, 311, 773, 1468, 1705
SspDI GGCGCC 1 cut(s) 15
SspI AATATT 1 cut(s) 1345
SspMI CTAG 6 cut(s) 386, 452, 602, 1059, 1175, 1611
SstI GAGCTC 2 cut(s) 234, 338
StuI AGGCCT 1 cut(s) 390
StyD4I CCNGG 3 cut(s) 176, 1308, 1615
TaaI ACNGT 3 cut(s) 97, 1239, 1625
TaiI ACGT 5 cut(s) 222, 252, 261, 961, 1220
TaqI TCGA 8 cut(s) 162, 193, 341, 493, 742, 1017, 1332, 1596
TasI AATT 6 cut(s) 591, 617, 830, 1034, 1254, 1601
TatI WGTACW 1 cut(s) 1098
TauI GCSGC 3 cut(s) 313, 1471, 1708
TfiI GAWTC 2 cut(s) 694, 892
Tru1I TTAA 5 cut(s) 402, 564, 675, 734, 1559
Tru9I TTAA 5 cut(s) 402, 564, 675, 734, 1559
TscAI CASTG 3 cut(s) 353, 379, 1628
TseFI GTSAC 1 cut(s) 859
Tsp45I GTSAC 1 cut(s) 859
TspDTI ATGAA 4 cut(s) 564, 884, 1003, 1542
TspRI CASTG 3 cut(s) 353, 379, 1628
XapI RAATTY 4 cut(s) 591, 617, 830, 1254
XceI RCATGY 2 cut(s) 1525, 1572
XcmI CCANNNNNNNNNTGG 1 cut(s) 1347
XmiI GTMKAC 3 cut(s) 327, 1234, 1398
XmnI GAANNNNTTC 1 cut(s) 1038
XspI CTAG 6 cut(s) 386, 452, 602, 1059, 1175, 1611
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.