Rorug04G0148500

Carboxylesterase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000306
Physical Location & Seq
Reverse (-)
26070504 .. 26079759
9256 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0148500.1

Sequence Viewer

Length: 2025 bp
ATGGTGGCCGACGGCTACTCGTGGCGGTGGCTAGAGTCTTGTAATTGGGGTGGAGGCGTGGTGGCTACTGCAGCTTGGAGTTGGCTAGGGAGGAGGAACCACGCTCTGTCCAAAACCCTATCTCTTGTTTCTTCCCCATTTCCCAAATCAATTCTTCATCTTCTCCGCACCACTCCCTCCTCCCCTTCCCTTTCCCTCCACCACCACCACGCTTCTCGTCTTCCTCTCCGCTTGCTCTCCGCCACTGATCATCTCGACGTTTCCCTAACAGACGACGACGACGAAGAACAAGAACTAGAACCAGAAGCAGAAGCAGAGGGAGATGAGTCCGACGTCGATTTGGACCTCAACGCCCTCGAACAAGACGCCCTTCTCGCCGTCCGAGACTTCTCTTCATCTCTCTCCAACCAGCTCACAATCGAAGATGAGAAAACTGATCAAGAGGCACTCGGCCGAAAGCAGAGGAGGCAGAAAACTCCAATCAAAAATAAAACTATCCCTGACCATCTTCTTCCGAGAGTTGCAATTGTTGGAAGACCAAATGTTGGTAAATCAGCATTATTCAATCGACTTGTCTCGGGGAACAAGGCAATTGTAGTTGATGAGCCAGGGGTCACTAGGGATCGCCTGTATGGTGGATCCTTTTGGGGGGACTTTGAATTTATGGTGGTCGATACTGGTGGTGTTCTTACAGTTTCAAAGTCACAGGCCAACGTCATGGAAGAACTGGCCATTTCAACGACCATTGGTATGGATGGAATTCCACTTGCCTCCAGAGAGGCAGCGGTTGCAAGGATGCCCTCAATGATTGAGAAACAAGCTACTGCAGCTGTTGAAGAGTCATCAGTCATTATTTTTCTTGTTGATGGCCAGGCTGGTCTAACTGCGGCTGACGAGGAAATTTCAGATTGGCTACGTAGGAACTTCTCAGATAAGTACATCATTCTTGCAGTCAACAAATGTGAATCTCCACGTAAAGGAGTCATGCAAGCATCAGAGTTTTGGTCTTTGGGGTTTTCGCCGCTTCCTATATCTGGTATATCTGGAACTGGAACCGGAGAGCTTCTCGATCTTGTGTGTTCAGGCCTAAAAAAGATTGAGGATCCTGATGATTTTGCTGAACAAGAAGATTATGTTCCTGCAATTGCAATTGTTGGTCGACCAAATGTTGGTAAAAGTAGCATTTTGAACGCGTTGGTTGGAGAAGACAGGACAATTGTTAGCCCAGTCAGTGGAACTACTCGCGATGCTATTGATATTGAATTCACTGGACCAGATGGACAGAAGTTCCGGCTTATTGACACTGCCGGAATCAGAAGAAAAGCCGTTGTTGCTTCATCAGGTAGTGTGACGGAGGCTTTATCAGTTAATCGAGCATTTCGTGCCATTCGCCGTTCTGATGTTGTGGCTCTTGTCATTGAGGCCATGGCTTGTATCACAGAACAGGATTGCAAGATTGCTGAAAGGATAGAAAGAGAAGGGAAAGGTTGCCTGATAGTTGTAAACAAATGGGACACTATACCAAATAAAAACCAGCAGACTGCAACATACTACGAGCAGGATGTGAGGGAAAAGCTTCGTATTCTCGATTGGGCGCCGGTTGTATATTCAACTGCACTAGCTGGTCGTAGTGTTGATAAAATTATCATGGCTGCTAGCACTGTTGAGAAAGAACGGTCAAGAAGGCTTACGACTGCTGTGGTAAATCAAGTGGTACAGGAGGCACTAGCTTTTAAATCACCACCTAGGACTCGAGGTGGCAAAAGAGGACGTATTTATTACAGCACTCAGGCTGCTATAAGGCCACCAACATTTGTATTCTTTGTTAATGATGCGAAACTTTTCCCTGAAACTTATCGTCGCTATATGGAGAAGCAACTGCGTTCAGATGCTGGGTTTGCGGGTACTCCAATTCGCCTTTTATGGAGCAACAGGAGGAAGACAGAAAGAGATGAAGGGAGAGCTACAACAAGGACAAAAGGGAATCTTGTGCCACGTGACAAAAAATTGGAATTAGCTACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

674

Amino Acids

74.28

Weight (kDa)

6.07

Isoelectric Point (pI)

47.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 173 - 320 4.2e-22 50S ribosome-binding GTPase
FeoB_N PF02421 173 - 235 4.2e-07 Ferrous iron transport protein B
MMR_HSR1 PF01926 382 - 503 3.9e-27 50S ribosome-binding GTPase
FeoB_N PF02421 382 - 548 3.4e-09 Ferrous iron transport protein B
KH_dom-like PF14714 562 - 642 5.6e-28 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000306)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19330
fragaria_vesca FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 336
AccB1I GGYRCC 1 cut(s) 1594
AccB7I CCANNNNNTGG 3 cut(s) 545, 1169, 1232
AccI GTMKAC 1 cut(s) 1159
AccII CGCG 2 cut(s) 1193, 1245
AciI CCGC 8 cut(s) 25, 166, 229, 240, 785, 887, 1022, 1901
AclWI GGATC 5 cut(s) 630, 633, 646, 1097, 1110
AcoI YGGCCR 4 cut(s) 6, 451, 729, 868
AcsI RAATTY 4 cut(s) 659, 759, 900, 1262
AcvI CACGTG 1 cut(s) 1997
AcyI GRCGYC 3 cut(s) 333, 366, 1595
AfaI GTAC 3 cut(s) 938, 1716, 1906
AfiI CCNNNNNNNGG 6 cut(s) 545, 648, 977, 1034, 1169, 1232
AflIII ACRYGT 1 cut(s) 1191
AgsI TTSAA 8 cut(s) 565, 659, 699, 738, 836, 1189, 1262, 1611
AjnI CCWGG 2 cut(s) 607, 870
Alw26I GTCTC 2 cut(s) 378, 580
AlwI GGATC 5 cut(s) 630, 633, 646, 1097, 1110
AlwNI CAGNNNCTG 1 cut(s) 1892
Ama87I CYCGRG 2 cut(s) 577, 1752
AoxI GGCC 8 cut(s) 6, 451, 708, 729, 868, 1084, 1422, 1802
ApeKI GCWGC 5 cut(s) 71, 782, 827, 1652, 1793
ApoI RAATTY 4 cut(s) 659, 759, 900, 1262
Asp700I GAANNNNTTC 2 cut(s) 1575, 1841
AspA2I CCTAGG 1 cut(s) 1745
AspLEI GCGC 1 cut(s) 1597
AspS9I GGNCC 2 cut(s) 343, 1271
AsuHPI GGTGA 1 cut(s) 1731
AsuNHI GCTAGC 1 cut(s) 1655
AvaI CYCGRG 2 cut(s) 577, 1752
AvaII GGWCC 2 cut(s) 343, 1271
AvrII CCTAGG 1 cut(s) 1745
BalI TGGCCA 2 cut(s) 731, 870
BamHI GGATCC 2 cut(s) 638, 1102
BanI GGYRCC 1 cut(s) 1594
BauI CACGAG 1 cut(s) 19
BbrPI CACGTG 1 cut(s) 1997
BbsI GAAGAC 4 cut(s) 212, 541, 1212, 1946
BbvI GCAGC 5 cut(s) 83, 794, 839, 1639, 1780
BccI CCATC 4 cut(s) 513, 749, 860, 1271
BceAI ACGGC 4 cut(s) 28, 362, 1310, 1377
BciT130I CCWGG 2 cut(s) 609, 872
BclI TGATCA 2 cut(s) 247, 436
BcoDI GTCTC 2 cut(s) 378, 580
BfaI CTAG 8 cut(s) 32, 86, 296, 618, 1619, 1656, 1727, 1746
BfmI CTRYAG 2 cut(s) 69, 825
BfoI RGCGCY 1 cut(s) 1598
BisI GCNGC 7 cut(s) 72, 783, 828, 888, 1022, 1653, 1794
BlnI CCTAGG 1 cut(s) 1745
BlsI GCNGC 7 cut(s) 73, 784, 829, 889, 1023, 1654, 1795
Bme1390I CCNGG 2 cut(s) 609, 872
Bme18I GGWCC 2 cut(s) 343, 1271
BmeT110I CYCGRG 2 cut(s) 577, 1752
BmgT120I GGNCC 2 cut(s) 343, 1271
BmiI GGNNCC 5 cut(s) 98, 640, 1054, 1104, 1596
BmrFI CCNGG 2 cut(s) 609, 872
BmrI ACTGGG 1 cut(s) 1220
BmsI GCATC 5 cut(s) 786, 1001, 1237, 1822, 1879
BmtI GCTAGC 1 cut(s) 1659
BmuI ACTGGG 1 cut(s) 1220
BpiI GAAGAC 4 cut(s) 212, 541, 1212, 1946
BplI GAGNNNNNCTC 2 cut(s) 1050, 1082
BpmI CTGGAG 1 cut(s) 757
BsaAI YACGTR 3 cut(s) 917, 974, 1997
BsaHI GRCGYC 3 cut(s) 333, 366, 1595
BsaJI CCNNGG 3 cut(s) 608, 1425, 1745
BsaWI WCCGGW 1 cut(s) 1055
BsaXI ACNNNNNCTCC 2 cut(s) 45, 75
Bsc4I CCNNNNNNNGG 6 cut(s) 545, 648, 977, 1034, 1169, 1232
Bse118I RCCGGY 1 cut(s) 1597
Bse1I ACTGG 5 cut(s) 682, 732, 1054, 1226, 1273
BseBI CCWGG 2 cut(s) 609, 872
BseDI CCNNGG 3 cut(s) 608, 1425, 1745
BseGI GGATG 3 cut(s) 760, 801, 1567
BseLI CCNNNNNNNGG 6 cut(s) 545, 648, 977, 1034, 1169, 1232
BseMII CTCAG 2 cut(s) 942, 1802
BseNI ACTGG 5 cut(s) 682, 732, 1054, 1226, 1273
BseRI GAGGAG 3 cut(s) 106, 169, 478
BseX3I CGGCCG 1 cut(s) 451
BseXI GCAGC 5 cut(s) 83, 794, 839, 1639, 1780
BseYI CCCAGC 1 cut(s) 1892
BsgI GTGCAG 1 cut(s) 1599
Bsh1236I CGCG 2 cut(s) 1193, 1245
Bsh1285I CGRYCG 1 cut(s) 454
BshFI GGCC 8 cut(s) 8, 453, 710, 731, 870, 1086, 1424, 1804
BshNI GGYRCC 1 cut(s) 1594
BsiEI CGRYCG 1 cut(s) 454
BsiHKCI CYCGRG 2 cut(s) 577, 1752
BsiSI CCGG 4 cut(s) 1056, 1291, 1308, 1598
BslFI GGGAC 2 cut(s) 665, 1526
BslI CCNNNNNNNGG 6 cut(s) 545, 648, 977, 1034, 1169, 1232
BsmAI GTCTC 2 cut(s) 378, 580
BsmFI GGGAC 2 cut(s) 665, 1526
BsnI GGCC 8 cut(s) 8, 453, 710, 731, 870, 1086, 1424, 1804
BsoBI CYCGRG 2 cut(s) 577, 1752
Bsp143I GATC 6 cut(s) 247, 436, 622, 638, 1069, 1102
Bsp19I CCATGG 1 cut(s) 1425
Bsp68I TCGCGA 1 cut(s) 1245
BspACI CCGC 8 cut(s) 25, 166, 229, 240, 785, 887, 1022, 1901
BspANI GGCC 8 cut(s) 8, 453, 710, 731, 870, 1086, 1424, 1804
BspCNI CTCAG 2 cut(s) 941, 1801
BspFNI CGCG 2 cut(s) 1193, 1245
BspLI GGNNCC 5 cut(s) 98, 640, 1054, 1104, 1596
BspMAI CTGCAG 2 cut(s) 73, 829
BspOI GCTAGC 1 cut(s) 1659
BspPI GGATC 5 cut(s) 630, 633, 646, 1097, 1110
BspT107I GGYRCC 1 cut(s) 1594
BsrFI RCCGGY 1 cut(s) 1597
BsrI ACTGG 5 cut(s) 682, 732, 1054, 1226, 1273
BssAI RCCGGY 1 cut(s) 1597
BssECI CCNNGG 3 cut(s) 608, 1425, 1745
BssMI GATC 6 cut(s) 247, 436, 622, 638, 1069, 1102
BssNI GRCGYC 3 cut(s) 333, 366, 1595
BssSI CACGAG 1 cut(s) 19
BssT1I CCWWGG 2 cut(s) 1425, 1745
Bst2BI CACGAG 1 cut(s) 19
Bst2UI CCWGG 2 cut(s) 609, 872
Bst4CI ACNGT 3 cut(s) 694, 1663, 1677
Bst6I CTCTTC 2 cut(s) 397, 831
BstACI GRCGYC 3 cut(s) 333, 366, 1595
BstAPI GCANNNNNTGC 2 cut(s) 788, 1382
BstBAI YACGTR 3 cut(s) 917, 974, 1997
BstC8I GCNNGC 3 cut(s) 233, 990, 1657
BstDEI CTNAG 2 cut(s) 928, 1788
BstDSI CCRYGG 1 cut(s) 1425
BstF5I GGATG 3 cut(s) 760, 801, 1567
BstFNI CGCG 2 cut(s) 1193, 1245
BstH2I RGCGCY 1 cut(s) 1598
BstHHI GCGC 1 cut(s) 1597
BstKTI GATC 6 cut(s) 250, 439, 625, 641, 1072, 1105
BstMAI GTCTC 2 cut(s) 378, 580
BstMBI GATC 6 cut(s) 247, 436, 622, 638, 1069, 1102
BstMCI CGRYCG 1 cut(s) 454
BstMWI GCNNNNNNNGC 8 cut(s) 71, 374, 466, 788, 827, 1331, 1382, 1898
BstNI CCWGG 2 cut(s) 609, 872
BstSCI CCNGG 2 cut(s) 607, 870
BstSFI CTRYAG 2 cut(s) 69, 825
BstSNI TACGTA 1 cut(s) 917
BstUI CGCG 2 cut(s) 1193, 1245
BstV1I GCAGC 5 cut(s) 83, 794, 839, 1639, 1780
BstV2I GAAGAC 4 cut(s) 212, 541, 1212, 1946
BstX2I RGATCY 2 cut(s) 638, 1102
BstXI CCANNNNNNTGG 2 cut(s) 718, 751
BstYI RGATCY 2 cut(s) 638, 1102
BstZI CGGCCG 1 cut(s) 451
BsuRI GGCC 8 cut(s) 8, 453, 710, 731, 870, 1086, 1424, 1804
BtgI CCRYGG 1 cut(s) 1425
BtgZI GCGATG 1 cut(s) 1260
BtsCI GGATG 3 cut(s) 760, 801, 1567
BtsI GCAGTG 1 cut(s) 1302
BtsIMutI CAGTG 5 cut(s) 243, 1237, 1266, 1302, 1659
BtuMI TCGCGA 1 cut(s) 1245
Cac8I GCNNGC 3 cut(s) 233, 990, 1657
CaiI CAGNNNCTG 1 cut(s) 1892
CfoI GCGC 1 cut(s) 1597
Cfr10I RCCGGY 1 cut(s) 1597
Cfr13I GGNCC 2 cut(s) 343, 1271
CseI GACGC 1 cut(s) 374
Csp6I GTAC 3 cut(s) 937, 1715, 1905
CviAII CATG 5 cut(s) 718, 985, 1426, 1648, 2022
CviQI GTAC 3 cut(s) 937, 1715, 1905
DdeI CTNAG 2 cut(s) 928, 1788
DinI GGCGCC 1 cut(s) 1596
DpnI GATC 6 cut(s) 249, 438, 624, 640, 1071, 1104
DpnII GATC 6 cut(s) 247, 436, 622, 638, 1069, 1102
DraI TTTAAA 1 cut(s) 1735
EaeI YGGCCR 4 cut(s) 6, 451, 729, 868
EagI CGGCCG 1 cut(s) 451
Eam1104I CTCTTC 2 cut(s) 397, 831
EarI CTCTTC 2 cut(s) 397, 831
EciI GGCGGA 1 cut(s) 229
EclXI CGGCCG 1 cut(s) 451
Eco105I TACGTA 1 cut(s) 917
Eco130I CCWWGG 2 cut(s) 1425, 1745
Eco147I AGGCCT 1 cut(s) 1086
Eco47I GGWCC 2 cut(s) 343, 1271
Eco52I CGGCCG 1 cut(s) 451
Eco72I CACGTG 1 cut(s) 1997
Eco88I CYCGRG 2 cut(s) 577, 1752
EcoRI GAATTC 2 cut(s) 759, 1262
EcoRII CCWGG 2 cut(s) 607, 870
EcoT14I CCWWGG 2 cut(s) 1425, 1745
EgeI GGCGCC 1 cut(s) 1596
EheI GGCGCC 1 cut(s) 1596
ErhI CCWWGG 2 cut(s) 1425, 1745
FaeI CATG 5 cut(s) 721, 988, 1429, 1651, 2025
FalI AAGNNNNNCTT 4 cut(s) 354, 386, 1971, 2003
FaqI GGGAC 2 cut(s) 665, 1526
FatI CATG 5 cut(s) 717, 984, 1425, 1647, 2021
FauI CCCGC 1 cut(s) 1894
FbaI TGATCA 2 cut(s) 247, 436
FblI GTMKAC 1 cut(s) 1159
Fnu4HI GCNGC 7 cut(s) 72, 783, 828, 888, 1022, 1653, 1794
FokI GGATG 3 cut(s) 767, 808, 1574
Fsp4HI GCNGC 7 cut(s) 72, 783, 828, 888, 1022, 1653, 1794
FspBI CTAG 8 cut(s) 32, 86, 296, 618, 1619, 1656, 1727, 1746
GlaI GCGC 1 cut(s) 1596
GluI GCNGC 7 cut(s) 72, 783, 828, 888, 1022, 1653, 1794
GsaI CCCAGC 1 cut(s) 1896
GsuI CTGGAG 1 cut(s) 757
HaeII RGCGCY 1 cut(s) 1598
HaeIII GGCC 8 cut(s) 8, 453, 710, 731, 870, 1086, 1424, 1804
HapII CCGG 4 cut(s) 1056, 1291, 1308, 1598
HgaI GACGC 1 cut(s) 374
HhaI GCGC 1 cut(s) 1597
Hin1I GRCGYC 3 cut(s) 333, 366, 1595
Hin1II CATG 5 cut(s) 721, 988, 1429, 1651, 2025
Hin6I GCGC 1 cut(s) 1595
HinP1I GCGC 1 cut(s) 1595
HincII GTYRAC 2 cut(s) 955, 1160
HindII GTYRAC 2 cut(s) 955, 1160
HindIII AAGCTT 1 cut(s) 1574
HinfI GANTC 8 cut(s) 35, 326, 839, 965, 981, 1311, 1750, 1984
HpaII CCGG 4 cut(s) 1056, 1291, 1308, 1598
HphI GGTGA 1 cut(s) 1731
Hpy166II GTNNAC 3 cut(s) 955, 1160, 1504
Hpy188I TCNGA 9 cut(s) 331, 383, 516, 907, 931, 997, 1316, 1399, 1888
Hpy188III TCNNGA 9 cut(s) 254, 440, 774, 1044, 1067, 1106, 1244, 1586, 1680
Hpy8I GTNNAC 3 cut(s) 955, 1160, 1504
Hpy99I CGWCG 8 cut(s) 14, 260, 278, 281, 284, 335, 338, 1863
HpyAV CCTTC 5 cut(s) 195, 380, 1472, 1677, 1949
HpyCH4III ACNGT 3 cut(s) 694, 1663, 1677
HpyCH4IV ACGT 7 cut(s) 258, 333, 714, 916, 973, 1771, 1996
HpyF10VI GCNNNNNNNGC 8 cut(s) 71, 374, 466, 788, 827, 1331, 1382, 1898
HpyF3I CTNAG 2 cut(s) 928, 1788
HpySE526I ACGT 7 cut(s) 258, 333, 714, 916, 973, 1771, 1996
Hsp92I GRCGYC 3 cut(s) 333, 366, 1595
Hsp92II CATG 5 cut(s) 721, 988, 1429, 1651, 2025
HspAI GCGC 1 cut(s) 1595
KasI GGCGCC 1 cut(s) 1594
Ksp22I TGATCA 2 cut(s) 247, 436
Kzo9I GATC 6 cut(s) 247, 436, 622, 638, 1069, 1102
LmnI GCTCC 1 cut(s) 1926
Lsp1109I GCAGC 5 cut(s) 83, 794, 839, 1639, 1780
LweI GCATC 5 cut(s) 786, 1001, 1237, 1822, 1879
MaeI CTAG 8 cut(s) 32, 86, 296, 618, 1619, 1656, 1727, 1746
MaeII ACGT 7 cut(s) 258, 333, 714, 916, 973, 1771, 1996
MaeIII GTNAC 4 cut(s) 613, 702, 1348, 1997
MalI GATC 6 cut(s) 249, 438, 624, 640, 1071, 1104
MboI GATC 6 cut(s) 247, 436, 622, 638, 1069, 1102
MfeI CAATTG 5 cut(s) 525, 591, 1143, 1149, 1215
MflI RGATCY 2 cut(s) 638, 1102
MlsI TGGCCA 2 cut(s) 731, 870
MluI ACGCGT 1 cut(s) 1191
MluNI TGGCCA 2 cut(s) 731, 870
Mly113I GGCGCC 1 cut(s) 1595
MlyI GAGTC 5 cut(s) 44, 335, 848, 990, 1744
MmeI TCCRAC 4 cut(s) 354, 429, 511, 1180
Mox20I TGGCCA 2 cut(s) 731, 870
MroXI GAANNNNTTC 2 cut(s) 1575, 1841
MscI TGGCCA 2 cut(s) 731, 870
MseI TTAA 3 cut(s) 1368, 1734, 1827
MslI CAYNNNNRTG 1 cut(s) 749
Msp20I TGGCCA 2 cut(s) 731, 870
MspA1I CMGCKG 2 cut(s) 785, 830
MspI CCGG 4 cut(s) 1056, 1291, 1308, 1598
MspR9I CCNGG 2 cut(s) 609, 872
MunI CAATTG 5 cut(s) 525, 591, 1143, 1149, 1215
MvaI CCWGG 2 cut(s) 609, 872
MvnI CGCG 2 cut(s) 1193, 1245
MwoI GCNNNNNNNGC 8 cut(s) 71, 374, 466, 788, 827, 1331, 1382, 1898
NarI GGCGCC 1 cut(s) 1595
NcoI CCATGG 1 cut(s) 1425
NdeII GATC 6 cut(s) 247, 436, 622, 638, 1069, 1102
NheI GCTAGC 1 cut(s) 1655
NlaIII CATG 5 cut(s) 721, 988, 1429, 1651, 2025
NlaIV GGNNCC 5 cut(s) 98, 640, 1054, 1104, 1596
NmeAIII GCCGAG 1 cut(s) 429
NmuCI GTSAC 4 cut(s) 613, 702, 1348, 1997
NruI TCGCGA 1 cut(s) 1245
PaeR7I CTCGAG 1 cut(s) 1752
PceI AGGCCT 1 cut(s) 1086
PcsI WCGNNNNNNNCGW 2 cut(s) 279, 1378
PdmI GAANNNNTTC 2 cut(s) 1575, 1841
PfeI GAWTC 3 cut(s) 965, 1311, 1984
PflMI CCANNNNNTGG 3 cut(s) 545, 1169, 1232
PkrI GCNGC 7 cut(s) 73, 784, 829, 889, 1023, 1654, 1795
PleI GAGTC 5 cut(s) 43, 334, 847, 989, 1744
PluTI GGCGCC 1 cut(s) 1598
PmaCI CACGTG 1 cut(s) 1997
PmlI CACGTG 1 cut(s) 1997
PpsI GAGTC 5 cut(s) 43, 334, 847, 989, 1744
Ppu21I YACGTR 3 cut(s) 917, 974, 1997
Psp6I CCWGG 2 cut(s) 607, 870
PspCI CACGTG 1 cut(s) 1997
PspFI CCCAGC 1 cut(s) 1892
PspGI CCWGG 2 cut(s) 607, 870
PspN4I GGNNCC 5 cut(s) 98, 640, 1054, 1104, 1596
PspPI GGNCC 2 cut(s) 343, 1271
PspXI VCTCGAGB 1 cut(s) 1752
PstI CTGCAG 2 cut(s) 73, 829
PstNI CAGNNNCTG 1 cut(s) 1892
PsuI RGATCY 2 cut(s) 638, 1102
PvuII CAGCTG 1 cut(s) 830
RruI TCGCGA 1 cut(s) 1245
RsaI GTAC 3 cut(s) 938, 1716, 1906
RsaNI GTAC 3 cut(s) 937, 1715, 1905
RseI CAYNNNNRTG 1 cut(s) 749
SalI GTCGAC 1 cut(s) 1158
SaqAI TTAA 3 cut(s) 1368, 1734, 1827
SatI GCNGC 7 cut(s) 72, 783, 828, 888, 1022, 1653, 1794
Sau3AI GATC 6 cut(s) 247, 436, 622, 638, 1069, 1102
Sau96I GGNCC 2 cut(s) 343, 1271
SchI GAGTC 5 cut(s) 44, 335, 848, 990, 1744
ScrFI CCNGG 2 cut(s) 609, 872
SfaNI GCATC 5 cut(s) 786, 1001, 1237, 1822, 1879
SfcI CTRYAG 2 cut(s) 69, 825
SfoI GGCGCC 1 cut(s) 1596
Sfr274I CTCGAG 1 cut(s) 1752
SinI GGWCC 2 cut(s) 343, 1271
SlaI CTCGAG 1 cut(s) 1752
SmiMI CAYNNNNRTG 1 cut(s) 749
SmlI CTYRAG 1 cut(s) 1752
SmoI CTYRAG 1 cut(s) 1752
SnaBI TACGTA 1 cut(s) 917
SseBI AGGCCT 1 cut(s) 1086
SsiI CCGC 8 cut(s) 25, 166, 229, 240, 785, 887, 1022, 1901
SspDI GGCGCC 1 cut(s) 1594
SspMI CTAG 8 cut(s) 32, 86, 296, 618, 1619, 1656, 1727, 1746
StuI AGGCCT 1 cut(s) 1086
StyD4I CCNGG 2 cut(s) 607, 870
StyI CCWWGG 2 cut(s) 1425, 1745
TaaI ACNGT 3 cut(s) 694, 1663, 1677
TaiI ACGT 7 cut(s) 261, 336, 717, 919, 976, 1774, 1999
TatI WGTACW 1 cut(s) 936
TauI GCSGC 2 cut(s) 890, 1024
TfiI GAWTC 3 cut(s) 965, 1311, 1984
Tru1I TTAA 3 cut(s) 1368, 1734, 1827
Tru9I TTAA 3 cut(s) 1368, 1734, 1827
TscAI CASTG 5 cut(s) 250, 1237, 1273, 1309, 1666
TseFI GTSAC 4 cut(s) 613, 702, 1348, 1997
TseI GCWGC 5 cut(s) 71, 782, 827, 1652, 1793
Tsp45I GTSAC 4 cut(s) 613, 702, 1348, 1997
TspDTI ATGAA 4 cut(s) 146, 384, 1326, 1968
TspGWI ACGGA 1 cut(s) 1367
TspRI CASTG 5 cut(s) 250, 1237, 1273, 1309, 1666
Van91I CCANNNNNTGG 3 cut(s) 545, 1169, 1232
VpaK11BI GGWCC 2 cut(s) 343, 1271
XapI RAATTY 4 cut(s) 659, 759, 900, 1262
XhoI CTCGAG 1 cut(s) 1752
XmaJI CCTAGG 1 cut(s) 1745
XmiI GTMKAC 1 cut(s) 1159
XmnI GAANNNNTTC 2 cut(s) 1575, 1841
XspI CTAG 8 cut(s) 32, 86, 296, 618, 1619, 1656, 1727, 1746
ZraI GACGTC 1 cut(s) 334
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.