Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000306

Physical Location & Seq

Genomic Coordinates Reverse (-)

12264857 .. 12266121

Gene Structure 1265 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G155200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 984 bp

ATGACTTCCACCACCGCGAAAGAAATAGCCTCCGAATTCCTTCCTCGCATCAGAATCTACAAAGATGGCACAGTGGAACGCCTTCTGGGCTCTCCCTATGTGCCCCCTTCTCCTCATGACCCACAAACCAGAGTCTCCTCTAAAGACTTAACTTTTTCACACAACCCCAACATCTCTGCTCGACTTTACCTCCCAAATGTCCCTCAAAACCAAACCCAAAAGCTACCCATCTTGGTTTACTTCCATGGTGGAGCATTTTGCATTGAATCTGCCTTCTCGTTCCTTGACCACCGTTATCTCAACCGCTTGGTCTCAGAAGCCCAAGTTATAGCTGTCTCTGTTGAGTACAGACTTGCCCCAGAGAACCCACTTCCTATTGCTTATGAAGATTGCTGGGCTGCGCTTCAATGGGTCACTTCTCACGCAAACAACGAAGAATTAGATGATAACAAAGAACCATGGTTACTCAACTATGGAGATTTTGATAGATTGTACATTGGTGGTGATAGTGCAGGTGGCAATATTGCACATAACTTGGCTATGAAGGTAGGGGCTGAGAGCATTTCTGGTGCTGTGAAAATTTTGGGTGCATTTCTGTCCCACTCTTACTTTTGGGGTTCCAAGCCAATTGGGTCAGAGCCTAAAGGTGAAGACTTTGAGAAGACTATGGAGTATAAAGTTTGGGACTTTGTTTATCCATCAGCTCCTGGAGGGATTGATAATCCAATGGTGAATCCAGCAGGTGAGGGTGCCCCGAGCCTGGCTGGACTCGGGTGCTCTAAGCTGCTTGTGTGTGTTGCAGGCAAGGATCAGCTGAGGGATCGAGGTGTTTGGTATTGTGATTTGGTGAGGGAAAGTGGGTGGAAAGGAGAAGTGGAGCTGTTTGAAGTGGAAGGAGAGGACCATTGCTTTCATATCTTTAGTGAGACTGAGACGGAGAATGTTAAGAAAATGATCAAACGCTTGGCTTCTTTTCTTGTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006725 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009698 GO:0009699 GO:0009717 GO:0009987 GO:0016787 GO:0016788 GO:0016829 GO:0016835 GO:0016836 GO:0018130 GO:0019438 GO:0019748 GO:0033987 GO:0044237 GO:0044249 GO:0044550 GO:0046287 GO:0046483 GO:0052689 GO:0071704 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00943 ko01110 map00943 map01110

Pfam Domains

Protein Families

Abhydrolase_3

Protein Analysis

328

Amino Acids

36.38

Weight (kDa)

5.18

Isoelectric Point (pI)

37.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19330
fragaria_vesca	FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica	MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica	Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis	pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis	RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata	RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora	Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii	Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa	Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha	Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana	Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	503, 731
Acc36I	ACCTGC	2 cut(s)	503, 731
AccB1I	GGYRCC	1 cut(s)	749
AccII	CGCG	1 cut(s)	17
AciI	CCGC	2 cut(s)	15, 304
AclWI	GGATC	2 cut(s)	816, 828
AcsI	RAATTY	2 cut(s)	35, 579
AfaI	GTAC	2 cut(s)	347, 494
AfiI	CCNNNNNNNGG	1 cut(s)	760
AgsI	TTSAA	3 cut(s)	266, 407, 887
AjnI	CCWGG	2 cut(s)	706, 759
AluBI	AGCT	6 cut(s)	223, 332, 704, 784, 814, 880
AluI	AGCT	6 cut(s)	223, 332, 704, 784, 814, 880
Alw21I	GWGCWC	1 cut(s)	779
Alw26I	GTCTC	5 cut(s)	139, 316, 340, 920, 926
AlwI	GGATC	2 cut(s)	816, 828
AlwNI	CAGNNNCTG	1 cut(s)	707
Ama87I	CYCGRG	2 cut(s)	754, 770
ApeKI	GCWGC	2 cut(s)	398, 784
ApoI	RAATTY	2 cut(s)	35, 579
Asp700I	GAANNNNTTC	2 cut(s)	39, 81
AspLEI	GCGC	1 cut(s)	403
AspS9I	GGNCC	1 cut(s)	901
AsuHPI	GGTGA	5 cut(s)	515, 659, 742, 755, 859
AvaI	CYCGRG	2 cut(s)	754, 770
AvaII	GGWCC	1 cut(s)	901
BaeGI	GKGCMC	2 cut(s)	105, 754
BanI	GGYRCC	1 cut(s)	749
BanII	GRGCYC	1 cut(s)	92
BbsI	GAAGAC	2 cut(s)	657, 668
Bbv12I	GWGCWC	1 cut(s)	779
BbvCI	CCTCAGC	1 cut(s)	815
BbvI	GCAGC	2 cut(s)	385, 771
BccI	CCATC	3 cut(s)	59, 236, 706
BciT130I	CCWGG	2 cut(s)	708, 761
BclI	TGATCA	1 cut(s)	954
BcoDI	GTCTC	5 cut(s)	139, 316, 340, 920, 926
BfaI	CTAG	1 cut(s)	982
BfuAI	ACCTGC	2 cut(s)	503, 731
BglI	GCCNNNNNGGC	1 cut(s)	87
BisI	GCNGC	2 cut(s)	399, 785
BlsI	GCNGC	2 cut(s)	400, 786
Bme1390I	CCNGG	2 cut(s)	708, 761
Bme18I	GGWCC	1 cut(s)	901
BmeT110I	CYCGRG	2 cut(s)	754, 770
BmgT120I	GGNCC	1 cut(s)	901
BmiI	GGNNCC	2 cut(s)	619, 751
BmrFI	CCNGG	2 cut(s)	708, 761
BmsI	GCATC	1 cut(s)	57
BpiI	GAAGAC	2 cut(s)	657, 668
BpmI	CTGGAG	1 cut(s)	729
Bpu10I	CCTNAGC	1 cut(s)	815
BsaI	GGTCTC	1 cut(s)	316
BsaJI	CCNNGG	2 cut(s)	244, 458
BsaXI	ACNNNNNCTCC	2 cut(s)	174, 204
Bsc4I	CCNNNNNNNGG	1 cut(s)	760
Bse3DI	GCAATG	1 cut(s)	904
BseBI	CCWGG	2 cut(s)	708, 761
BseDI	CCNNGG	2 cut(s)	244, 458
BseLI	CCNNNNNNNGG	1 cut(s)	760
BseMI	GCAATG	1 cut(s)	904
BseMII	CTCAG	4 cut(s)	327, 546, 806, 921
BseRI	GAGGAG	2 cut(s)	102, 127
BseSI	GKGCMC	2 cut(s)	105, 754
BseXI	GCAGC	2 cut(s)	385, 771
BseYI	CCCAGC	1 cut(s)	393
BsgI	GTGCAG	1 cut(s)	531
Bsh1236I	CGCG	1 cut(s)	17
BshNI	GGYRCC	1 cut(s)	749
BsiHKAI	GWGCWC	1 cut(s)	779
BsiHKCI	CYCGRG	2 cut(s)	754, 770
BslFI	GGGAC	3 cut(s)	185, 583, 698
BslI	CCNNNNNNNGG	1 cut(s)	760
BsmAI	GTCTC	5 cut(s)	139, 316, 340, 920, 926
BsmBI	CGTCTC	1 cut(s)	926
BsmFI	GGGAC	3 cut(s)	185, 583, 698
Bso31I	GGTCTC	1 cut(s)	316
BsoBI	CYCGRG	2 cut(s)	754, 770
Bsp1286I	GDGCHC	4 cut(s)	92, 105, 754, 779
Bsp1407I	TGTACA	1 cut(s)	492
Bsp143I	GATC	3 cut(s)	808, 820, 954
Bsp19I	CCATGG	2 cut(s)	244, 458
BspACI	CCGC	2 cut(s)	15, 304
BspCNI	CTCAG	4 cut(s)	326, 547, 807, 922
BspFNI	CGCG	1 cut(s)	17
BspHI	TCATGA	1 cut(s)	115
BspLI	GGNNCC	2 cut(s)	619, 751
BspMI	ACCTGC	2 cut(s)	503, 731
BspPI	GGATC	2 cut(s)	816, 828
BspT107I	GGYRCC	1 cut(s)	749
BspTNI	GGTCTC	1 cut(s)	316
BsrDI	GCAATG	1 cut(s)	904
BsrGI	TGTACA	1 cut(s)	492
BssECI	CCNNGG	2 cut(s)	244, 458
BssMI	GATC	3 cut(s)	808, 820, 954
BssT1I	CCWWGG	2 cut(s)	244, 458
Bst2UI	CCWGG	2 cut(s)	708, 761
Bst4CI	ACNGT	2 cut(s)	73, 293
BstAUI	TGTACA	1 cut(s)	492
BstC8I	GCNNGC	1 cut(s)	802
BstDEI	CTNAG	5 cut(s)	313, 555, 780, 815, 930
BstDSI	CCRYGG	2 cut(s)	244, 458
BstFNI	CGCG	1 cut(s)	17
BstHHI	GCGC	1 cut(s)	403
BstKTI	GATC	3 cut(s)	811, 823, 957
BstMAI	GTCTC	5 cut(s)	139, 316, 340, 920, 926
BstMBI	GATC	3 cut(s)	808, 820, 954
BstMWI	GCNNNNNNNGC	1 cut(s)	87
BstNI	CCWGG	2 cut(s)	708, 761
BstSCI	CCNGG	2 cut(s)	706, 759
BstSLI	GKGCMC	2 cut(s)	105, 754
BstUI	CGCG	1 cut(s)	17
BstV1I	GCAGC	2 cut(s)	385, 771
BstV2I	GAAGAC	2 cut(s)	657, 668
BtgI	CCRYGG	2 cut(s)	244, 458
BtsIMutI	CAGTG	1 cut(s)	78
BveI	ACCTGC	2 cut(s)	503, 731
Cac8I	GCNNGC	1 cut(s)	802
CaiI	CAGNNNCTG	1 cut(s)	707
CciI	TCATGA	1 cut(s)	115
CfoI	GCGC	1 cut(s)	403
Cfr13I	GGNCC	1 cut(s)	901
Csp6I	GTAC	2 cut(s)	346, 493
CviAII	CATG	3 cut(s)	116, 245, 459
CviQI	GTAC	2 cut(s)	346, 493
DdeI	CTNAG	5 cut(s)	313, 555, 780, 815, 930
DpnI	GATC	3 cut(s)	810, 822, 956
DpnII	GATC	3 cut(s)	808, 820, 954
Eco130I	CCWWGG	2 cut(s)	244, 458
Eco24I	GRGCYC	1 cut(s)	92
Eco31I	GGTCTC	1 cut(s)	316
Eco47I	GGWCC	1 cut(s)	901
Eco88I	CYCGRG	2 cut(s)	754, 770
EcoRI	GAATTC	1 cut(s)	35
EcoRII	CCWGG	2 cut(s)	706, 759
EcoT14I	CCWWGG	2 cut(s)	244, 458
EcoT38I	GRGCYC	1 cut(s)	92
ErhI	CCWWGG	2 cut(s)	244, 458
Esp3I	CGTCTC	1 cut(s)	926
FaeI	CATG	3 cut(s)	119, 248, 462
FaqI	GGGAC	3 cut(s)	185, 583, 698
FatI	CATG	3 cut(s)	115, 244, 458
FbaI	TGATCA	1 cut(s)	954
Fnu4HI	GCNGC	2 cut(s)	399, 785
FriOI	GRGCYC	1 cut(s)	92
Fsp4HI	GCNGC	2 cut(s)	399, 785
FspBI	CTAG	1 cut(s)	982
GlaI	GCGC	1 cut(s)	402
GluI	GCNGC	2 cut(s)	399, 785
GsaI	CCCAGC	1 cut(s)	397
GsuI	CTGGAG	1 cut(s)	729
HhaI	GCGC	1 cut(s)	403
Hin1II	CATG	3 cut(s)	119, 248, 462
Hin6I	GCGC	1 cut(s)	401
HinP1I	GCGC	1 cut(s)	401
HinfI	GANTC	5 cut(s)	54, 132, 266, 733, 768
HphI	GGTGA	5 cut(s)	515, 659, 742, 755, 859
Hpy166II	GTNNAC	1 cut(s)	238
Hpy188I	TCNGA	4 cut(s)	34, 53, 316, 637
Hpy188III	TCNNGA	1 cut(s)	116
Hpy8I	GTNNAC	1 cut(s)	238
HpyAV	CCTTC	6 cut(s)	50, 92, 117, 283, 538, 887
HpyCH4III	ACNGT	2 cut(s)	73, 293
HpyCH4V	TGCA	5 cut(s)	261, 512, 527, 590, 800
HpyF10VI	GCNNNNNNNGC	1 cut(s)	87
HpyF3I	CTNAG	5 cut(s)	313, 555, 780, 815, 930
Hsp92II	CATG	3 cut(s)	119, 248, 462
HspAI	GCGC	1 cut(s)	401
Ksp22I	TGATCA	1 cut(s)	954
Kzo9I	GATC	3 cut(s)	808, 820, 954
LmnI	GCTCC	3 cut(s)	251, 709, 877
Lsp1109I	GCAGC	2 cut(s)	385, 771
LweI	GCATC	1 cut(s)	57
MaeI	CTAG	1 cut(s)	982
MaeIII	GTNAC	2 cut(s)	412, 462
MalI	GATC	3 cut(s)	810, 822, 956
MboI	GATC	3 cut(s)	808, 820, 954
MboII	GAAGA	4 cut(s)	398, 446, 662, 673
MfeI	CAATTG	1 cut(s)	627
MhlI	GDGCHC	4 cut(s)	92, 105, 754, 779
MluCI	AATT	4 cut(s)	35, 437, 579, 627
MlyI	GAGTC	2 cut(s)	141, 762
MroXI	GAANNNNTTC	2 cut(s)	39, 81
MseI	TTAA	2 cut(s)	149, 945
MspA1I	CMGCKG	1 cut(s)	814
MspR9I	CCNGG	2 cut(s)	708, 761
MunI	CAATTG	1 cut(s)	627
MvaI	CCWGG	2 cut(s)	708, 761
MvnI	CGCG	1 cut(s)	17
MwoI	GCNNNNNNNGC	1 cut(s)	87
NcoI	CCATGG	2 cut(s)	244, 458
NdeII	GATC	3 cut(s)	808, 820, 954
NlaIII	CATG	3 cut(s)	119, 248, 462
NlaIV	GGNNCC	2 cut(s)	619, 751
NmuCI	GTSAC	1 cut(s)	412
PagI	TCATGA	1 cut(s)	115
PaqCI	CACCTGC	2 cut(s)	503, 731
PcsI	WCGNNNNNNNCGW	1 cut(s)	429
PdmI	GAANNNNTTC	2 cut(s)	39, 81
PfeI	GAWTC	3 cut(s)	54, 266, 733
PfoI	TCCNGGA	1 cut(s)	706
PkrI	GCNGC	2 cut(s)	400, 786
PleI	GAGTC	2 cut(s)	140, 762
PpsI	GAGTC	2 cut(s)	140, 762
Psp6I	CCWGG	2 cut(s)	706, 759
PspFI	CCCAGC	1 cut(s)	393
PspGI	CCWGG	2 cut(s)	706, 759
PspN4I	GGNNCC	2 cut(s)	619, 751
PspPI	GGNCC	1 cut(s)	901
PsrI	GAACNNNNNNTAC	2 cut(s)	447, 479
PstNI	CAGNNNCTG	1 cut(s)	707
PvuII	CAGCTG	1 cut(s)	814
RsaI	GTAC	2 cut(s)	347, 494
RsaNI	GTAC	2 cut(s)	346, 493
SaqAI	TTAA	2 cut(s)	149, 945
SatI	GCNGC	2 cut(s)	399, 785
Sau3AI	GATC	3 cut(s)	808, 820, 954
Sau96I	GGNCC	1 cut(s)	901
SchI	GAGTC	2 cut(s)	141, 762
ScrFI	CCNGG	2 cut(s)	708, 761
SduI	GDGCHC	4 cut(s)	92, 105, 754, 779
SfaNI	GCATC	1 cut(s)	57
SinI	GGWCC	1 cut(s)	901
Sse9I	AATT	4 cut(s)	35, 437, 579, 627
SsiI	CCGC	2 cut(s)	15, 304
SspI	AATATT	1 cut(s)	523
SspMI	CTAG	1 cut(s)	982
StyD4I	CCNGG	2 cut(s)	706, 759
StyI	CCWWGG	2 cut(s)	244, 458
TaaI	ACNGT	2 cut(s)	73, 293
TaqI	TCGA	2 cut(s)	181, 823
TasI	AATT	4 cut(s)	35, 437, 579, 627
TatI	WGTACW	2 cut(s)	345, 492
TfiI	GAWTC	3 cut(s)	54, 266, 733
Tru1I	TTAA	2 cut(s)	149, 945
Tru9I	TTAA	2 cut(s)	149, 945
TscAI	CASTG	1 cut(s)	78
TseFI	GTSAC	1 cut(s)	412
TseI	GCWGC	2 cut(s)	398, 784
Tsp45I	GTSAC	1 cut(s)	412
TspDTI	ATGAA	3 cut(s)	399, 557, 902
TspGWI	ACGGA	1 cut(s)	950
TspRI	CASTG	1 cut(s)	78
VpaK11BI	GGWCC	1 cut(s)	901
XapI	RAATTY	2 cut(s)	35, 579
XmnI	GAANNNNTTC	2 cut(s)	39, 81
XspI	CTAG	1 cut(s)	982

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.