MD13G1188000.v1.1

Arm repeat protein interacting with

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Reverse (-)
15993550 .. 15999835
6286 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1188000.v1.1.491

Sequence Viewer

Length: 2466 bp
ATGTGGCCGGTTTTGACCCGACACAGCTCACCGGAAAAGAAAAGAAAAGGAAAAAGCAACAAAACAGAAAAGAAAAAGCTTTTACTTCTTTTTTTGTTAATCCTGAAATTCCGAAAATACCCTTGGATCTTCCCCTCTCACTTGTCTGTTTCTCTGTCTCTTACCTGTTCAAATCCAAAGTTTGTTTTTCCAATTCGGATAGCTGCTTCTTCTTCTTCTGCTTCGCTTCCGTCGCCGTTGATGGAATTGCAGAGGGGCCAGGATCAGAGCCGTCCGGAGCGGAAGGGGCAGAAGCGGAAGCTGGAGGAGGAAACCGGTGGCGAGCGGGAGATCTCGGTGAAGTCCGGCGAAGCAAGAAAGGCGCTTCTGAGCGAGGTCAGCGAGCAGGTGAAGGTCCTCAACTCCACCTTCTCTTGGAGCGAAGCCGATCGAGCTTCGGCCAAGCGCGCCACGCACGTTCTCGCCGAGATCGCCAAGAACGAGGAGGTAGTGAACGTGATCGTCGAAGGCGGCGCGGTTCCGTCTCTGGTAAAGCATCTTCAAGCGCCGCCGTTAAGCGACGGCGACCGGAGTTCGAAGCCGTTCGAACACGAGGTCGAGAAGGGAAGTGCCTTTGCCCTGGGCCTTCTCGCAGTTAAGCCTGAGCATCAACAACTCATTGTTGACACTGGTGCATTGGCTCATCTTGTGGATTTGTTAAAGAGGCACAAGGATAGTCCTGTATCTCGGGCTCTGTATAGCGTCATTCGTAGAGCTGCTGATGCCATCACCAACCTTGCTCATGAGAATAGCAGCATTAAAACCCGTGTCAGAATGGAAGGTGGAATTCCACCTCTAGTTGAGTTGCTTGAATTTGCTGATACCAAGGTGCAAAGAGCAGCTGCTGGAGCACTACGAACTCTGGCATTTAAAAATGACGAGAATAAGAATCAGATTGTTGAATGCAATGCGCTTCCTACTCTCATTCTAATGCTTCGGTCTGAGGATGCTGCAATACATTACGAAGCAGTTGGTGTTATTGGAAATCTGGTACACTCATCTCCGAACATAAAGAAAGAAGTTCTTCTTGCGGGAGCTTTACAACCTGTTATTGGATTGCTTAGGTGTAGGTTTCTGAAATCTTTTATATTGGGTTACAGTTCCTGCTGCTCTGAGAGCCAAAGAGAGGCAGCTTTATTAATTGGACAATTTGCTGCAACTGATTCAGATTGCAAGGTTCACATTGTACAGAGGGGTGCTATTCAGCCTCTGATTGAAATGCTTCAGTCCCCTGACGTACAACTAAGGGAGATGTCAGCTTTTGCGTTGGGGAGACTCGCACAGGACACAAACAACCAAGCTGGTATTGCACATAATGGTGCTTTAGTGCCATTGCTGAAGCTTCTTGATTCGAAAAATGGTTCTTTACAACATAATGCTGCATTTACTCTTTATGGTCTTGCAGATAACGAGGATAATGTCTCCGATTATATTAGGATTGGAGGTGTTCAGAAGCTGCAAGATGGAGAATTTATTTTTCAAGTATCTCTCTCTCTCGCTCTCACTAAAGATTTAATTTATATTTGTAGTTCCTTAGATATACAATGGATGTTTTCAGCAACAAAGGATTGTGTGACCAAAACATTGAAAAGATTAGAGGAGAAGATTCGTGGACGAGTTTTGTCCCATTTGCTATATTTGATGCGTGTAGCAGAGAGGGCAGTCCAAAGACGAGTTGCTTTGGCTTTTGCTCATCTTTGTTCACCAGATGATCTGAGAACAATATTCATTGACAACAATGGTCTGGAGTTGCTTCTTGGGCTTCTTGGTTCCAGTACCCATAAACAGCAACTTGATGGTGCTACGGCTTTATATAAGTTGGCTAACAAAGCCATGACTCTTTCTCCTGTGGATGCAGCTCCCCCATCTCCAACACCACAGGTGTATCTGGGGGAACAGTATGTAAACAATCCTACGCTGTCCGATGTTATTTTCTTAGTTGAAGGTAAACGGTTCTATGCTCACAGAATTTGCCTGCTTGCTTCTTCAGATGCGTTCCGTGCAATGTTTGATGGTGGTTACCGGGAGAAGGATGCGAGGGACATAGAGATACCAAATATTAGATGGGAAGTTTTCGAGTTGATGATGAGATTTATATACACTGGATCAGTCGACATTACTCTTGATATTGCTCAAGATCTCCTCAGAGCTGCAGATCAGTATCTTTTGGAGGGACTCAAGCGGCTTTGCGAGTACACAATAGCACAGGACATATCGTTGGAGAACGTTTCAAACATGTATGAACTTTCAGAAGCCTTCCATGGAATGTCATTAAGGCACACATGCATTTTGTTTATCTTGGAGCAGTTCGAAAAATTGAGTGCCAGACCAGGGCACTCTCATCTGATCATGCGTATATTACCCGAGATCAGCACTTACTTTACTAAAGCGCTTACGAAGCCTAACCCACATAGCTTGCGGCTATAA

Protein Analysis

822

Amino Acids

91.28

Weight (kDa)

8.68

Isoelectric Point (pI)

44.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_ARMC5 PF24768 247 - 473 3.6e-12 ARMC5
Arm PF00514 270 - 302 5.1e-07 Armadillo/beta-catenin-like repeat
Arm PF00514 305 - 344 2.3e-07 Armadillo/beta-catenin-like repeat
BTB PF00651 649 - 749 1.2e-24 BTB/POZ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000306)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19330
fragaria_vesca FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 376
Acc36I ACCTGC 1 cut(s) 376
AccBSI CCGCTC 2 cut(s) 280, 325
AccI GTMKAC 1 cut(s) 2151
AccII CGCG 2 cut(s) 447, 515
AccIII TCCGGA 1 cut(s) 274
AciI CCGC 9 cut(s) 280, 295, 325, 510, 515, 548, 1070, 2221, 2458
AclI AACGTT 1 cut(s) 2265
AclWI GGATC 3 cut(s) 134, 270, 2152
AcoI YGGCCR 2 cut(s) 5, 438
AcsI RAATTY 5 cut(s) 107, 825, 851, 1508, 2007
AcuI CTGAAG 3 cut(s) 1247, 1397, 2010
AfaI GTAC 5 cut(s) 1032, 1227, 1278, 1816, 2234
AfeI AGCGCT 1 cut(s) 2430
AfiI CCNNNNNNNGG 5 cut(s) 414, 1091, 1165, 2068, 2370
AflIII ACRYGT 1 cut(s) 2274
AgeI ACCGGT 1 cut(s) 314
AgsI TTSAA 9 cut(s) 171, 542, 851, 941, 1256, 1520, 1627, 1982, 2271
AjnI CCWGG 3 cut(s) 258, 618, 2368
AjuI GAANNNNNNNTTGG 2 cut(s) 106, 138
Alw21I GWGCWC 1 cut(s) 892
Alw26I GTCTC 4 cut(s) 162, 528, 1306, 1465
AlwI GGATC 3 cut(s) 134, 270, 2152
AlwNI CAGNNNCTG 4 cut(s) 884, 1143, 1249, 1495
Ama87I CYCGRG 2 cut(s) 726, 2402
Aor13HI TCCGGA 1 cut(s) 274
Aor51HI AGCGCT 1 cut(s) 2430
AoxI GGCC 4 cut(s) 5, 256, 438, 622
ApoI RAATTY 5 cut(s) 107, 825, 851, 1508, 2007
ArsI GACNNNNNNTTYG 2 cut(s) 579, 611
AseI ATTAAT 1 cut(s) 1178
AsiGI ACCGGT 1 cut(s) 314
Asp700I GAANNNNTTC 3 cut(s) 581, 1062, 1260
AspLEI GCGC 7 cut(s) 364, 447, 449, 515, 547, 952, 2431
AspS9I GGNCC 3 cut(s) 256, 394, 622
AsuC2I CCSGG 1 cut(s) 2063
AsuHPI GGTGA 5 cut(s) 21, 349, 400, 760, 1734
AsuII TTCGAA 4 cut(s) 575, 585, 1391, 2349
AvaI CYCGRG 2 cut(s) 726, 2402
AvaII GGWCC 1 cut(s) 394
BaeGI GKGCMC 1 cut(s) 2376
BaeI ACNNNNGTAYC 4 cut(s) 852, 885, 1907, 1940
BanII GRGCYC 1 cut(s) 733
BarI GAAGNNNNNNTAC 2 cut(s) 522, 554
BauI CACGAG 1 cut(s) 590
Bbv12I GWGCWC 1 cut(s) 892
BccI CCATC 7 cut(s) 235, 773, 1496, 1829, 1912, 2045, 2097
BceAI ACGGC 6 cut(s) 220, 255, 535, 565, 577, 1860
BciT130I CCWGG 3 cut(s) 260, 620, 2370
BclI TGATCA 1 cut(s) 2385
BcnI CCSGG 1 cut(s) 2063
BcoDI GTCTC 4 cut(s) 162, 528, 1306, 1465
BfaI CTAG 1 cut(s) 836
BfmI CTRYAG 1 cut(s) 2190
BfoI RGCGCY 3 cut(s) 365, 548, 2432
BfuAI ACCTGC 1 cut(s) 376
BglII AGATCT 2 cut(s) 330, 2176
Bme1390I CCNGG 4 cut(s) 260, 620, 2063, 2370
Bme18I GGWCC 1 cut(s) 394
BmeT110I CYCGRG 2 cut(s) 726, 2402
BmgT120I GGNCC 3 cut(s) 256, 394, 622
BmiI GGNNCC 3 cut(s) 257, 519, 1810
BmrFI CCNGG 4 cut(s) 260, 620, 2063, 2370
BmsI GCATC 8 cut(s) 544, 655, 751, 976, 1671, 1882, 2020, 2062
BpmI CTGGAG 3 cut(s) 323, 906, 1805
Bpu10I CCTNAGC 2 cut(s) 642, 1100
Bpu14I TTCGAA 4 cut(s) 575, 585, 1391, 2349
BpuEI CTTGAG 2 cut(s) 2157, 2201
BpuMI CCSGG 1 cut(s) 2063
BsaBI GATNNNNATC 1 cut(s) 2199
BsaJI CCNNGG 6 cut(s) 122, 618, 619, 864, 2299, 2369
BsaWI WCCGGW 4 cut(s) 31, 274, 314, 567
BsaXI ACNNNNNCTCC 2 cut(s) 1867, 1897
Bsc4I CCNNNNNNNGG 5 cut(s) 414, 1091, 1165, 2068, 2370
Bse118I RCCGGY 2 cut(s) 7, 314
Bse1I ACTGG 3 cut(s) 673, 1812, 2146
Bse3DI GCAATG 3 cut(s) 952, 1370, 2049
Bse8I GATNNNNATC 1 cut(s) 2199
BseAI TCCGGA 1 cut(s) 274
BseBI CCWGG 3 cut(s) 260, 620, 2370
BseDI CCNNGG 6 cut(s) 122, 618, 619, 864, 2299, 2369
BseGI GGATG 4 cut(s) 991, 1593, 1897, 2077
BseJI GATNNNNATC 1 cut(s) 2199
BseLI CCNNNNNNNGG 5 cut(s) 414, 1091, 1165, 2068, 2370
BseMI GCAATG 3 cut(s) 952, 1370, 2049
BseMII CTCAG 6 cut(s) 359, 633, 972, 1143, 1745, 2197
BseNI ACTGG 3 cut(s) 673, 1812, 2146
BsePI GCGCGC 1 cut(s) 445
BseRI GAGGAG 4 cut(s) 320, 497, 1652, 2171
BseSI GKGCMC 1 cut(s) 2376
Bsh1236I CGCG 2 cut(s) 447, 515
Bsh1285I CGRYCG 2 cut(s) 430, 568
BshFI GGCC 4 cut(s) 7, 258, 440, 624
BshTI ACCGGT 1 cut(s) 314
BsiEI CGRYCG 2 cut(s) 430, 568
BsiHKAI GWGCWC 1 cut(s) 892
BsiHKCI CYCGRG 2 cut(s) 726, 2402
BsiSI CCGG 7 cut(s) 8, 32, 275, 315, 345, 568, 2062
BslFI GGGAC 4 cut(s) 1252, 1648, 2093, 2226
BslI CCNNNNNNNGG 5 cut(s) 414, 1091, 1165, 2068, 2370
BsmAI GTCTC 4 cut(s) 162, 528, 1306, 1465
BsmBI CGTCTC 1 cut(s) 528
BsmFI GGGAC 4 cut(s) 1252, 1648, 2093, 2226
BsmI GAATGC 1 cut(s) 947
BsnI GGCC 4 cut(s) 7, 258, 440, 624
BsoBI CYCGRG 2 cut(s) 726, 2402
Bsp119I TTCGAA 4 cut(s) 575, 585, 1391, 2349
Bsp1286I GDGCHC 3 cut(s) 733, 892, 2376
Bsp13I TCCGGA 1 cut(s) 274
Bsp1407I TGTACA 1 cut(s) 1225
Bsp19I CCATGG 1 cut(s) 2299
BspACI CCGC 9 cut(s) 280, 295, 325, 510, 515, 548, 1070, 2221, 2458
BspANI GGCC 4 cut(s) 7, 258, 440, 624
BspCNI CTCAG 6 cut(s) 360, 634, 973, 1144, 1746, 2196
BspEI TCCGGA 1 cut(s) 274
BspFNI CGCG 2 cut(s) 447, 515
BspHI TCATGA 1 cut(s) 781
BspLI GGNNCC 3 cut(s) 257, 519, 1810
BspMAI CTGCAG 1 cut(s) 2194
BspMI ACCTGC 1 cut(s) 376
BspPI GGATC 3 cut(s) 134, 270, 2152
BspT104I TTCGAA 4 cut(s) 575, 585, 1391, 2349
BsrBI CCGCTC 2 cut(s) 280, 325
BsrDI GCAATG 3 cut(s) 952, 1370, 2049
BsrFI RCCGGY 2 cut(s) 7, 314
BsrGI TGTACA 1 cut(s) 1225
BsrI ACTGG 3 cut(s) 673, 1812, 2146
BssAI RCCGGY 2 cut(s) 7, 314
BssECI CCNNGG 6 cut(s) 122, 618, 619, 864, 2299, 2369
BssHII GCGCGC 1 cut(s) 445
BssSI CACGAG 1 cut(s) 590
BssT1I CCWWGG 3 cut(s) 122, 864, 2299
Bst2BI CACGAG 1 cut(s) 590
Bst2UI CCWGG 3 cut(s) 260, 620, 2370
Bst4CI ACNGT 3 cut(s) 1139, 1938, 1992
BstAUI TGTACA 1 cut(s) 1225
BstBI TTCGAA 4 cut(s) 575, 585, 1391, 2349
BstC8I GCNNGC 6 cut(s) 323, 383, 447, 2015, 2019, 2456
BstDSI CCRYGG 1 cut(s) 2299
BstEII GGTNACC 1 cut(s) 2057
BstF5I GGATG 4 cut(s) 991, 1593, 1897, 2077
BstFNI CGCG 2 cut(s) 447, 515
BstH2I RGCGCY 3 cut(s) 365, 548, 2432
BstHHI GCGC 7 cut(s) 364, 447, 449, 515, 547, 952, 2431
BstMAI GTCTC 4 cut(s) 162, 528, 1306, 1465
BstMCI CGRYCG 2 cut(s) 430, 568
BstNI CCWGG 3 cut(s) 260, 620, 2370
BstNSI RCATGY 2 cut(s) 2278, 2325
BstPI GGTNACC 1 cut(s) 2057
BstSCI CCNGG 4 cut(s) 258, 618, 2061, 2368
BstSFI CTRYAG 1 cut(s) 2190
BstSLI GKGCMC 1 cut(s) 2376
BstUI CGCG 2 cut(s) 447, 515
BstX2I RGATCY 3 cut(s) 126, 330, 2176
BstYI RGATCY 3 cut(s) 126, 330, 2176
BsuRI GGCC 4 cut(s) 7, 258, 440, 624
BtgI CCRYGG 1 cut(s) 2299
BtsCI GGATG 4 cut(s) 991, 1593, 1897, 2077
BtsIMutI CAGTG 2 cut(s) 666, 2139
BveI ACCTGC 1 cut(s) 376
Cac8I GCNNGC 6 cut(s) 323, 383, 447, 2015, 2019, 2456
CaiI CAGNNNCTG 4 cut(s) 884, 1143, 1249, 1495
CciI TCATGA 1 cut(s) 781
CfoI GCGC 7 cut(s) 364, 447, 449, 515, 547, 952, 2431
Cfr10I RCCGGY 2 cut(s) 7, 314
Cfr13I GGNCC 3 cut(s) 256, 394, 622
CseI GACGC 1 cut(s) 730
Csp6I GTAC 5 cut(s) 1031, 1226, 1277, 1815, 2233
CspAI ACCGGT 1 cut(s) 314
CspCI CAANNNNNGTGG 1 cut(s) 2436
CviAII CATG 6 cut(s) 782, 1873, 2275, 2300, 2322, 2389
CviQI GTAC 5 cut(s) 1031, 1226, 1277, 1815, 2233
DraI TTTAAA 1 cut(s) 910
EaeI YGGCCR 2 cut(s) 5, 438
Eco130I CCWWGG 3 cut(s) 122, 864, 2299
Eco24I GRGCYC 1 cut(s) 733
Eco47I GGWCC 1 cut(s) 394
Eco47III AGCGCT 1 cut(s) 2430
Eco57I CTGAAG 3 cut(s) 1247, 1397, 2010
Eco88I CYCGRG 2 cut(s) 726, 2402
Eco91I GGTNACC 1 cut(s) 2057
EcoO109I RGGNCCY 1 cut(s) 394
EcoO65I GGTNACC 1 cut(s) 2057
EcoRI GAATTC 1 cut(s) 825
EcoRII CCWGG 3 cut(s) 258, 618, 2368
EcoT14I CCWWGG 3 cut(s) 122, 864, 2299
EcoT22I ATGCAT 1 cut(s) 2327
EcoT38I GRGCYC 1 cut(s) 733
ErhI CCWWGG 3 cut(s) 122, 864, 2299
Esp3I CGTCTC 1 cut(s) 528
FaeI CATG 6 cut(s) 785, 1876, 2278, 2303, 2325, 2392
FalI AAGNNNNNCTT 4 cut(s) 1047, 1079, 1050, 1082
FaqI GGGAC 4 cut(s) 1252, 1648, 2093, 2226
FatI CATG 6 cut(s) 781, 1872, 2274, 2299, 2321, 2388
FauI CCCGC 2 cut(s) 318, 1063
FbaI TGATCA 1 cut(s) 2385
FblI GTMKAC 1 cut(s) 2151
FokI GGATG 4 cut(s) 998, 1600, 1904, 2084
FriOI GRGCYC 1 cut(s) 733
FspBI CTAG 1 cut(s) 836
GlaI GCGC 7 cut(s) 363, 446, 448, 514, 546, 951, 2430
GsuI CTGGAG 3 cut(s) 323, 906, 1805
HaeII RGCGCY 3 cut(s) 365, 548, 2432
HaeIII GGCC 4 cut(s) 7, 258, 440, 624
HapII CCGG 7 cut(s) 8, 32, 275, 315, 345, 568, 2062
HgaI GACGC 1 cut(s) 730
HhaI GCGC 7 cut(s) 364, 447, 449, 515, 547, 952, 2431
Hin1II CATG 6 cut(s) 785, 1876, 2278, 2303, 2325, 2392
Hin6I GCGC 7 cut(s) 362, 445, 447, 513, 545, 950, 2429
HinP1I GCGC 7 cut(s) 362, 445, 447, 513, 545, 950, 2429
HincII GTYRAC 2 cut(s) 664, 2152
HindII GTYRAC 2 cut(s) 664, 2152
HindIII AAGCTT 2 cut(s) 77, 1379
HinfI GANTC 7 cut(s) 928, 1202, 1314, 1388, 1645, 1876, 2214
HpaII CCGG 7 cut(s) 8, 32, 275, 315, 345, 568, 2062
HphI GGTGA 5 cut(s) 21, 349, 400, 760, 1734
Hpy188III TCNNGA 8 cut(s) 103, 275, 598, 782, 1385, 1784, 2162, 2174
Hpy99I CGWCG 3 cut(s) 235, 506, 563
HpyCH4III ACNGT 3 cut(s) 1139, 1938, 1992
HpyCH4IV ACGT 4 cut(s) 456, 495, 1275, 2265
HpySE526I ACGT 4 cut(s) 456, 495, 1275, 2265
Hsp92II CATG 6 cut(s) 785, 1876, 2278, 2303, 2325, 2392
HspAI GCGC 7 cut(s) 362, 445, 447, 513, 545, 950, 2429
Kpn2I TCCGGA 1 cut(s) 274
Ksp22I TGATCA 1 cut(s) 2385
LmnI GCTCC 6 cut(s) 277, 417, 887, 1073, 1903, 2341
LweI GCATC 8 cut(s) 544, 655, 751, 976, 1671, 1882, 2020, 2062
MaeI CTAG 1 cut(s) 836
MaeII ACGT 4 cut(s) 456, 495, 1275, 2265
MaeIII GTNAC 3 cut(s) 1133, 1612, 2057
MbiI CCGCTC 2 cut(s) 280, 325
MboII GAAGA 8 cut(s) 121, 201, 204, 207, 530, 1055, 1654, 2016
MflI RGATCY 3 cut(s) 126, 330, 2176
MhlI GDGCHC 3 cut(s) 733, 892, 2376
MlyI GAGTC 3 cut(s) 1308, 1870, 2208
MmeI TCCRAC 2 cut(s) 1934, 2238
Mph1103I ATGCAT 1 cut(s) 2327
MroI TCCGGA 1 cut(s) 274
MroXI GAANNNNTTC 3 cut(s) 581, 1062, 1260
MseI TTAA 9 cut(s) 98, 554, 636, 698, 798, 909, 1178, 1553, 2312
MslI CAYNNNNRTG 2 cut(s) 968, 1356
MspA1I CMGCKG 1 cut(s) 881
MspI CCGG 7 cut(s) 8, 32, 275, 315, 345, 568, 2062
MspR9I CCNGG 4 cut(s) 260, 620, 2063, 2370
Mva1269I GAATGC 1 cut(s) 947
MvaI CCWGG 3 cut(s) 260, 620, 2370
MvnI CGCG 2 cut(s) 447, 515
NciI CCSGG 1 cut(s) 2063
NcoI CCATGG 1 cut(s) 2299
NlaIII CATG 6 cut(s) 785, 1876, 2278, 2303, 2325, 2392
NlaIV GGNNCC 3 cut(s) 257, 519, 1810
NmeAIII GCCGAG 1 cut(s) 490
NmuCI GTSAC 1 cut(s) 1612
NsiI ATGCAT 1 cut(s) 2327
NspI RCATGY 2 cut(s) 2278, 2325
NspV TTCGAA 4 cut(s) 575, 585, 1391, 2349
PagI TCATGA 1 cut(s) 781
PaqCI CACCTGC 1 cut(s) 376
PasI CCCWGGG 1 cut(s) 619
PauI GCGCGC 1 cut(s) 445
PciI ACATGT 1 cut(s) 2274
PcsI WCGNNNNNNNCGW 3 cut(s) 462, 477, 501
PctI GAATGC 1 cut(s) 947
PdmI GAANNNNTTC 3 cut(s) 581, 1062, 1260
PfeI GAWTC 4 cut(s) 928, 1202, 1388, 1645
PinAI ACCGGT 1 cut(s) 314
Ple19I CGATCG 1 cut(s) 430
PleI GAGTC 3 cut(s) 1308, 1870, 2208
PpsI GAGTC 3 cut(s) 1308, 1870, 2208
PpuMI RGGWCCY 1 cut(s) 394
PscI ACATGT 1 cut(s) 2274
PshBI ATTAAT 1 cut(s) 1178
Psp1406I AACGTT 1 cut(s) 2265
Psp5II RGGWCCY 1 cut(s) 394
Psp6I CCWGG 3 cut(s) 258, 618, 2368
PspEI GGTNACC 1 cut(s) 2057
PspGI CCWGG 3 cut(s) 258, 618, 2368
PspN4I GGNNCC 3 cut(s) 257, 519, 1810
PspPI GGNCC 3 cut(s) 256, 394, 622
PspPPI RGGWCCY 1 cut(s) 394
PstI CTGCAG 1 cut(s) 2194
PstNI CAGNNNCTG 4 cut(s) 884, 1143, 1249, 1495
PsuI RGATCY 3 cut(s) 126, 330, 2176
PteI GCGCGC 1 cut(s) 445
PvuI CGATCG 1 cut(s) 430
PvuII CAGCTG 1 cut(s) 881
RsaI GTAC 5 cut(s) 1032, 1227, 1278, 1816, 2234
RsaNI GTAC 5 cut(s) 1031, 1226, 1277, 1815, 2233
RseI CAYNNNNRTG 2 cut(s) 968, 1356
SalI GTCGAC 1 cut(s) 2150
SaqAI TTAA 9 cut(s) 98, 554, 636, 698, 798, 909, 1178, 1553, 2312
Sau96I GGNCC 3 cut(s) 256, 394, 622
SchI GAGTC 3 cut(s) 1308, 1870, 2208
ScrFI CCNGG 4 cut(s) 260, 620, 2063, 2370
SduI GDGCHC 3 cut(s) 733, 892, 2376
SfaNI GCATC 8 cut(s) 544, 655, 751, 976, 1671, 1882, 2020, 2062
SfcI CTRYAG 1 cut(s) 2190
SfuI TTCGAA 4 cut(s) 575, 585, 1391, 2349
SinI GGWCC 1 cut(s) 394
SmiMI CAYNNNNRTG 2 cut(s) 968, 1356
SmlI CTYRAG 2 cut(s) 2172, 2216
SmoI CTYRAG 2 cut(s) 2172, 2216
SsiI CCGC 9 cut(s) 280, 295, 325, 510, 515, 548, 1070, 2221, 2458
SspI AATATT 2 cut(s) 1764, 2098
SspMI CTAG 1 cut(s) 836
StyD4I CCNGG 4 cut(s) 258, 618, 2061, 2368
StyI CCWWGG 3 cut(s) 122, 864, 2299
TaaI ACNGT 3 cut(s) 1139, 1938, 1992
TaiI ACGT 4 cut(s) 459, 498, 1278, 2268
TaqI TCGA 9 cut(s) 430, 504, 575, 585, 597, 1391, 2115, 2151, 2349
TaqII GACCGA 1 cut(s) 966
TatI WGTACW 2 cut(s) 1225, 2232
TauI GCSGC 4 cut(s) 513, 550, 2224, 2461
TfiI GAWTC 4 cut(s) 928, 1202, 1388, 1645
Tru1I TTAA 9 cut(s) 98, 554, 636, 698, 798, 909, 1178, 1553, 2312
Tru9I TTAA 9 cut(s) 98, 554, 636, 698, 798, 909, 1178, 1553, 2312
TscAI CASTG 2 cut(s) 673, 2146
TseFI GTSAC 1 cut(s) 1612
Tsp45I GTSAC 1 cut(s) 1612
TspDTI ATGAA 2 cut(s) 1756, 2295
TspGWI ACGGA 3 cut(s) 219, 510, 2027
TspRI CASTG 2 cut(s) 673, 2146
VpaK11BI GGWCC 1 cut(s) 394
VspI ATTAAT 1 cut(s) 1178
XapI RAATTY 5 cut(s) 107, 825, 851, 1508, 2007
XceI RCATGY 2 cut(s) 2278, 2325
XcmI CCANNNNNNNNNTGG 1 cut(s) 2100
XmiI GTMKAC 1 cut(s) 2151
XmnI GAANNNNTTC 3 cut(s) 581, 1062, 1260
XspI CTAG 1 cut(s) 836
Zsp2I ATGCAT 1 cut(s) 2327
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.