Prupe.8G240700_v2.0.a1

Arm repeat protein interacting with

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
21103723 .. 21109211
5489 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G240700.1

Sequence Viewer

Length: 2133 bp
ATGGATCACTCTCAGAAGCGAACCGTCACCACCAGACGAGGCTTGAAGCGGAAGCTCGAAGAAGAATTCAGAGAAGACGGGCCTGAAAATGAACCCGATCTCAACGTCCCGGCCGTCGAGCCCCGAGACGTTTGTGAAGATCTGGAAAGTATGATTCGCCGCCGAGTCCAAACTCTCCAGTCCACCTTCTCTTCCTCCGAAGCAGATCGCCTCGCCGCCAAGACTGCCACTCGTGCCATCGCTTTAGTCGCCAAGAAAGAGGAACATGTGAACCTCGTAGTAGAGTGTGGAGCAGTTCCGGCTCTGGTTAAGCATCTACAGGCTCCGCCGCCAGAGAGAGGAGGCGATAACAGTCCGATTCCGTACGCGCATGAGGTCGAGAAAGACAGTGCTTTTGCGCTCGGGCTTATTGCCGTTAAGCTGGAGCATCAGCAACTCATAGTTGATGCTGGAGCTTTGCCGCATCTTGTTGATCTGTTAAAAAGGCACAAGAGGGACTCAGCACCAGCTGATGGTGTTATTAGGAGAGCTGCTAATGCAATCGCTAACATTGCTCATGAAAATAGCAGCATCAAGACCCGTGTCAGGATTGAAGGTGGAATCCCTCCTCTTGTTGAGCTACTTAACTTCTTTAACACAAAGGTACAGATATCTGCTGCAGGCGCCCTGCGGACCCTTGCATTTAAAAATGATGAAAACAAAAATCAGATTGTAGAGTGCAATGCTCTGCCTACCCTGGTACTAATGCTTCGATCTGAGGATGCAGCTATGACGTTTGAAGCGGTTGGAGTAATTGGTAATCTTGTCCACTCATCCCCAAGCATCAAGAAATTAGTTCTTCTTGCTGGTGCTTTACAACCTGTTATTGGATTACTCAGTTCCAGCTGTACGGAGAGTCAAAGAGAAGCTGCTTTATTACTTGGTCAGTTTGCTGCAGCTGATTCAGATTGCAAGGCACATATAGTTCAGAGGGGTGCTTTAAAACCATTAATTGAGATGCTTAAATCACCTGATGCGCAGGTTAGGGAGATGTCAGCTTTTGCGCTTGGGAGGTTGGCACAGGACATGCATAACCAAGCTGGCATTGCTCATAATGGTGGTATAGTGCCTCTTCTCAAGCTTCTTAATTCAAAAAATGGATCTCTACAACACAATGCTGCATTTTCTCTTTATGGTCTTGCAGAAAATGAGGATAATGTTGCAGCTTTAATTAAGCTTGGAGGTGTTCAGAAACTCCAAGATGGAGAATTTGTTGCTCAACAAACTAAGGATTGTGTGGCAAAGACATTGAAAAGATTAGAGGAGAAGATTTGTGGACAAGTTCTAAATAATCTATTATATCTGATGCGGGCTGCGGAGAAGCCTGTTCAAAAACGAGTGGCTTTGGCTCTTGCTCATCTTTGTAACCCTGGTGATCAGGAAACCATTTTTATTGATAACAAAGGATTAGAGTTGCTTTTAGGGCTTCTCGAATCTCCAAGCCTGAAGGAGAAACAAGATGGTTCTTTGGCCTTGTACAAAGTGGCTACAAAAGCCACTTCACTCTCCCATTTGGATCCAGCTCCTTCATCACCCACCCAACAGGTGTATTTGGGTGAAAAATACGTAAACAATCCTACACTTTCTGACATCACATTCTTAGTTGAAGGTAAACGGTTCTATGCCCACAGAATTTGTCTGCTTGCTTCTTCTGATGCATTCCGTGCCATGTTTGATGGTGGTTACAGGGAGAGAGATGCTAAGGATGTAGAGATTCCAAATATTAGATGGGACGTTTTTGAATTGATGATGAGATTCATATACACAGGATCTGTAGATGTCAAATTGGATATTGCTCAGGATCTCCTCAGAGCTGCTGATCAGTATCTTTTGGAGGGTCTCAAGCGCCTCTGCGAGCATGCCATTGCTCAGAACATCTACGTCGAAAATGTTTCGCTCATGTTTGAGTTATCAGAGGCCTTCAATGCCGTGTCATTAAGGCAAGCATGCATTCTGTTCATCTTGGAGCAATTTGACAATTTGATTACCAAACCATGGTATCCCGGACTGATAAATCGTATTGTACCAGAGATCCGCAGATTTTTTACTAATGCACTTACAATGCCTATCCAGGCAACCTCGCAGCAGGCTTAG

Protein Analysis

711

Amino Acids

78.17

Weight (kDa)

6.42

Isoelectric Point (pI)

48.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000306)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19330
fragaria_vesca FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1017
Acc36I ACCTGC 1 cut(s) 1009
AccB1I GGYRCC 1 cut(s) 662
AccB7I CCANNNNNTGG 2 cut(s) 512, 2034
AccII CGCG 1 cut(s) 368
AclWI GGATC 7 cut(s) 12, 1147, 1550, 1563, 1816, 1848, 2065
AcoI YGGCCR 1 cut(s) 111
AcsI RAATTY 3 cut(s) 65, 1247, 1671
AcuI CTGAAG 1 cut(s) 1505
AcyI GRCGYC 1 cut(s) 663
AfaI GTAC 6 cut(s) 365, 645, 741, 889, 1517, 2064
AfiI CCNNNNNNNGG 5 cut(s) 338, 512, 585, 866, 2034
AflIII ACRYGT 1 cut(s) 265
AgsI TTSAA 9 cut(s) 46, 593, 779, 1131, 1291, 1370, 1646, 1781, 1963
AjnI CCWGG 3 cut(s) 735, 1408, 2109
Alw26I GTCTC 2 cut(s) 120, 1883
AlwI GGATC 7 cut(s) 12, 1147, 1550, 1563, 1816, 1848, 2065
AlwNI CAGNNNCTG 1 cut(s) 1811
Ama87I CYCGRG 2 cut(s) 123, 401
AoxI GGCC 4 cut(s) 80, 111, 1509, 1956
ApoI RAATTY 3 cut(s) 65, 1247, 1671
ArsI GACNNNNNNTTYG 2 cut(s) 377, 409
AseI ATTAAT 1 cut(s) 989
AspLEI GCGC 6 cut(s) 370, 400, 665, 1018, 1045, 1887
AspS9I GGNCC 2 cut(s) 80, 672
AsuC2I CCSGG 2 cut(s) 110, 2043
AsuHPI GGTGA 5 cut(s) 19, 999, 1424, 1563, 1607
AvaI CYCGRG 2 cut(s) 123, 401
AvaII GGWCC 1 cut(s) 672
BaeI ACNNNNGTAYC 2 cut(s) 2021, 2054
BamHI GGATCC 1 cut(s) 1555
BanI GGYRCC 1 cut(s) 662
BanII GRGCYC 1 cut(s) 123
BarI GAAGNNNNNNTAC 2 cut(s) 732, 764
BauI CACGAG 1 cut(s) 231
BbsI GAAGAC 1 cut(s) 81
BccI CCATC 6 cut(s) 245, 506, 1235, 1493, 1709, 1761
BceAI ACGGC 3 cut(s) 98, 398, 1952
BciT130I CCWGG 3 cut(s) 737, 1410, 2111
BciVI GTATCC 1 cut(s) 2049
BclI TGATCA 2 cut(s) 1414, 1858
BcnI CCSGG 2 cut(s) 110, 2043
BcoDI GTCTC 2 cut(s) 120, 1883
BfmI CTRYAG 4 cut(s) 317, 657, 933, 1812
BfoI RGCGCY 2 cut(s) 666, 1888
BfuAI ACCTGC 1 cut(s) 1009
BfuI GTATCC 1 cut(s) 2049
BglII AGATCT 1 cut(s) 139
Bme1390I CCNGG 5 cut(s) 110, 737, 1410, 2043, 2111
Bme18I GGWCC 1 cut(s) 672
BmeT110I CYCGRG 2 cut(s) 123, 401
BmgT120I GGNCC 2 cut(s) 80, 672
BmiI GGNNCC 4 cut(s) 324, 664, 674, 1557
BmrFI CCNGG 5 cut(s) 110, 737, 1410, 2043, 2111
BoxI GACNNNNGTC 1 cut(s) 581
BpiI GAAGAC 1 cut(s) 81
BpmI CTGGAG 3 cut(s) 161, 443, 471
Bpu10I CCTNAGC 2 cut(s) 1740, 1836
BpuEI CTTGAG 2 cut(s) 1100, 1865
BpuMI CCSGG 2 cut(s) 110, 2043
BsaAI YACGTR 1 cut(s) 1606
BsaBI GATNNNNATC 1 cut(s) 1863
BsaHI GRCGYC 1 cut(s) 663
BsaI GGTCTC 1 cut(s) 1883
BsaJI CCNNGG 3 cut(s) 735, 1408, 2033
BsaXI ACNNNNNCTCC 2 cut(s) 1236, 1266
Bsc4I CCNNNNNNNGG 5 cut(s) 338, 512, 585, 866, 2034
Bse1I ACTGG 1 cut(s) 178
Bse3DI GCAATG 4 cut(s) 549, 727, 1083, 1902
Bse8I GATNNNNATC 1 cut(s) 1863
BseBI CCWGG 3 cut(s) 737, 1410, 2111
BseDI CCNNGG 3 cut(s) 735, 1408, 2033
BseGI GGATG 3 cut(s) 766, 812, 1750
BseJI GATNNNNATC 1 cut(s) 1863
BseLI CCNNNNNNNGG 5 cut(s) 338, 512, 585, 866, 2034
BseMI GCAATG 4 cut(s) 549, 727, 1083, 1902
BseMII CTCAG 7 cut(s) 26, 513, 747, 889, 1850, 1861, 1922
BseNI ACTGG 1 cut(s) 178
BseRI GAGGAG 4 cut(s) 354, 597, 1316, 1835
BseX3I CGGCCG 1 cut(s) 111
Bsh1236I CGCG 1 cut(s) 368
Bsh1285I CGRYCG 1 cut(s) 114
BshFI GGCC 4 cut(s) 82, 113, 1511, 1958
BshNI GGYRCC 1 cut(s) 662
BsiEI CGRYCG 1 cut(s) 114
BsiHKCI CYCGRG 2 cut(s) 123, 401
BsiSI CCGG 3 cut(s) 110, 299, 2043
BsiWI CGTACG 1 cut(s) 363
BslFI GGGAC 3 cut(s) 92, 509, 1784
BslI CCNNNNNNNGG 5 cut(s) 338, 512, 585, 866, 2034
BsmAI GTCTC 2 cut(s) 120, 1883
BsmBI CGTCTC 1 cut(s) 120
BsmFI GGGAC 3 cut(s) 92, 509, 1784
BsmI GAATGC 2 cut(s) 1697, 1989
BsnI GGCC 4 cut(s) 82, 113, 1511, 1958
Bso31I GGTCTC 1 cut(s) 1883
BsoBI CYCGRG 2 cut(s) 123, 401
Bsp1286I GDGCHC 1 cut(s) 123
Bsp1407I TGTACA 1 cut(s) 1515
Bsp19I CCATGG 1 cut(s) 2033
BspANI GGCC 4 cut(s) 82, 113, 1511, 1958
BspCNI CTCAG 7 cut(s) 25, 512, 748, 888, 1849, 1860, 1921
BspFNI CGCG 1 cut(s) 368
BspHI TCATGA 1 cut(s) 556
BspLI GGNNCC 4 cut(s) 324, 664, 674, 1557
BspMAI CTGCAG 2 cut(s) 661, 937
BspMI ACCTGC 1 cut(s) 1009
BspPI GGATC 7 cut(s) 12, 1147, 1550, 1563, 1816, 1848, 2065
BspT107I GGYRCC 1 cut(s) 662
BspTNI GGTCTC 1 cut(s) 1883
BsrDI GCAATG 4 cut(s) 549, 727, 1083, 1902
BsrGI TGTACA 1 cut(s) 1515
BsrI ACTGG 1 cut(s) 178
BssECI CCNNGG 3 cut(s) 735, 1408, 2033
BssNI GRCGYC 1 cut(s) 663
BssSI CACGAG 1 cut(s) 231
BssT1I CCWWGG 1 cut(s) 2033
Bst2BI CACGAG 1 cut(s) 231
Bst2UI CCWGG 3 cut(s) 737, 1410, 2111
Bst4CI ACNGT 4 cut(s) 25, 353, 389, 1656
Bst6I CTCTTC 2 cut(s) 196, 1116
BstACI GRCGYC 1 cut(s) 663
BstAPI GCANNNNNTGC 1 cut(s) 1703
BstAUI TGTACA 1 cut(s) 1515
BstBAI YACGTR 1 cut(s) 1606
BstC8I GCNNGC 9 cut(s) 661, 1081, 1350, 1683, 1895, 1899, 1983, 1987, 2127
BstDSI CCRYGG 1 cut(s) 2033
BstF5I GGATG 3 cut(s) 766, 812, 1750
BstFNI CGCG 1 cut(s) 368
BstH2I RGCGCY 2 cut(s) 666, 1888
BstHHI GCGC 6 cut(s) 370, 400, 665, 1018, 1045, 1887
BstMAI GTCTC 2 cut(s) 120, 1883
BstMCI CGRYCG 1 cut(s) 114
BstNI CCWGG 3 cut(s) 737, 1410, 2111
BstNSI RCATGY 4 cut(s) 269, 1069, 1901, 1989
BstPAI GACNNNNGTC 1 cut(s) 581
BstSCI CCNGG 5 cut(s) 108, 735, 1408, 2041, 2109
BstSFI CTRYAG 4 cut(s) 317, 657, 933, 1812
BstSNI TACGTA 1 cut(s) 1606
BstUI CGCG 1 cut(s) 368
BstV2I GAAGAC 1 cut(s) 81
BstX2I RGATCY 6 cut(s) 139, 1139, 1555, 1808, 1840, 2070
BstYI RGATCY 6 cut(s) 139, 1139, 1555, 1808, 1840, 2070
BstZI CGGCCG 1 cut(s) 111
BsuI GTATCC 1 cut(s) 2049
BsuRI GGCC 4 cut(s) 82, 113, 1511, 1958
BtgI CCRYGG 1 cut(s) 2033
BtgZI GCGATG 1 cut(s) 223
BtsCI GGATG 3 cut(s) 766, 812, 1750
BtsIMutI CAGTG 1 cut(s) 394
BveI ACCTGC 1 cut(s) 1009
Cac8I GCNNGC 9 cut(s) 661, 1081, 1350, 1683, 1895, 1899, 1983, 1987, 2127
CaiI CAGNNNCTG 1 cut(s) 1811
CciI TCATGA 1 cut(s) 556
CfoI GCGC 6 cut(s) 370, 400, 665, 1018, 1045, 1887
Cfr13I GGNCC 2 cut(s) 80, 672
Csp6I GTAC 6 cut(s) 364, 644, 740, 888, 1516, 2063
CspCI CAANNNNNGTGG 2 cut(s) 1655, 1690
CviAII CATG 9 cut(s) 266, 371, 557, 1066, 1708, 1898, 1939, 1986, 2034
CviQI GTAC 6 cut(s) 364, 644, 740, 888, 1516, 2063
DinI GGCGCC 1 cut(s) 664
DraI TTTAAA 2 cut(s) 685, 981
EaeI YGGCCR 1 cut(s) 111
EagI CGGCCG 1 cut(s) 111
Eam1104I CTCTTC 2 cut(s) 196, 1116
EarI CTCTTC 2 cut(s) 196, 1116
EciI GGCGGA 1 cut(s) 315
EclXI CGGCCG 1 cut(s) 111
Eco105I TACGTA 1 cut(s) 1606
Eco130I CCWWGG 1 cut(s) 2033
Eco147I AGGCCT 1 cut(s) 1958
Eco24I GRGCYC 1 cut(s) 123
Eco31I GGTCTC 1 cut(s) 1883
Eco32I GATATC 1 cut(s) 651
Eco47I GGWCC 1 cut(s) 672
Eco52I CGGCCG 1 cut(s) 111
Eco57I CTGAAG 1 cut(s) 1505
Eco88I CYCGRG 2 cut(s) 123, 401
EcoRI GAATTC 1 cut(s) 65
EcoRII CCWGG 3 cut(s) 735, 1408, 2109
EcoRV GATATC 1 cut(s) 651
EcoT14I CCWWGG 1 cut(s) 2033
EcoT22I ATGCAT 3 cut(s) 1071, 1699, 1991
EcoT38I GRGCYC 1 cut(s) 123
EgeI GGCGCC 1 cut(s) 664
EheI GGCGCC 1 cut(s) 664
ErhI CCWWGG 1 cut(s) 2033
Esp3I CGTCTC 1 cut(s) 120
FaeI CATG 9 cut(s) 269, 374, 560, 1069, 1711, 1901, 1942, 1989, 2037
FaqI GGGAC 3 cut(s) 92, 509, 1784
FatI CATG 9 cut(s) 265, 370, 556, 1065, 1707, 1897, 1938, 1985, 2033
FauI CCCGC 1 cut(s) 1341
FbaI TGATCA 2 cut(s) 1414, 1858
FokI GGATG 3 cut(s) 773, 799, 1757
FriOI GRGCYC 1 cut(s) 123
FspI TGCGCA 1 cut(s) 1017
GlaI GCGC 6 cut(s) 369, 399, 664, 1017, 1044, 1886
GsuI CTGGAG 3 cut(s) 161, 443, 471
HaeII RGCGCY 2 cut(s) 666, 1888
HaeIII GGCC 4 cut(s) 82, 113, 1511, 1958
HapII CCGG 3 cut(s) 110, 299, 2043
HhaI GCGC 6 cut(s) 370, 400, 665, 1018, 1045, 1887
Hin1I GRCGYC 1 cut(s) 663
Hin1II CATG 9 cut(s) 269, 374, 560, 1069, 1711, 1901, 1942, 1989, 2037
Hin6I GCGC 6 cut(s) 368, 398, 663, 1016, 1043, 1885
HinP1I GCGC 6 cut(s) 368, 398, 663, 1016, 1043, 1885
HindIII AAGCTT 2 cut(s) 1118, 1214
HpaII CCGG 3 cut(s) 110, 299, 2043
HphI GGTGA 5 cut(s) 19, 999, 1424, 1563, 1607
Hpy166II GTNNAC 6 cut(s) 183, 271, 808, 1316, 1609, 1652
Hpy188III TCNNGA 9 cut(s) 143, 379, 557, 574, 586, 826, 1418, 1469, 1838
Hpy8I GTNNAC 6 cut(s) 183, 271, 808, 1316, 1609, 1652
Hpy99I CGWCG 2 cut(s) 119, 1925
HpyAV CCTTC 6 cut(s) 196, 587, 1480, 1575, 1640, 1969
HpyCH4III ACNGT 4 cut(s) 25, 353, 389, 1656
HpyCH4IV ACGT 6 cut(s) 105, 129, 773, 1605, 1773, 1920
HpySE526I ACGT 6 cut(s) 105, 129, 773, 1605, 1773, 1920
Hsp92I GRCGYC 1 cut(s) 663
Hsp92II CATG 9 cut(s) 269, 374, 560, 1069, 1711, 1901, 1942, 1989, 2037
HspAI GCGC 6 cut(s) 368, 398, 663, 1016, 1043, 1885
KasI GGCGCC 1 cut(s) 662
Ksp22I TGATCA 2 cut(s) 1414, 1858
LmnI GCTCC 6 cut(s) 290, 328, 424, 452, 1567, 2005
MaeII ACGT 6 cut(s) 105, 129, 773, 1605, 1773, 1920
MaeIII GTNAC 3 cut(s) 25, 1403, 1721
MboII GAAGA 9 cut(s) 71, 74, 86, 149, 183, 830, 1103, 1318, 1680
MflI RGATCY 6 cut(s) 139, 1139, 1555, 1808, 1840, 2070
MhlI GDGCHC 1 cut(s) 123
Mly113I GGCGCC 1 cut(s) 663
MlyI GAGTC 3 cut(s) 174, 491, 904
MmeI TCCRAC 1 cut(s) 766
Mph1103I ATGCAT 3 cut(s) 1071, 1699, 1991
MslI CAYNNNNRTG 1 cut(s) 1095
MspA1I CMGCKG 3 cut(s) 509, 885, 938
MspI CCGG 3 cut(s) 110, 299, 2043
MspR9I CCNGG 5 cut(s) 110, 737, 1410, 2043, 2111
Mva1269I GAATGC 2 cut(s) 1697, 1989
MvaI CCWGG 3 cut(s) 737, 1410, 2111
MvnI CGCG 1 cut(s) 368
NarI GGCGCC 1 cut(s) 663
NciI CCSGG 2 cut(s) 110, 2043
NcoI CCATGG 1 cut(s) 2033
NlaIII CATG 9 cut(s) 269, 374, 560, 1069, 1711, 1901, 1942, 1989, 2037
NlaIV GGNNCC 4 cut(s) 324, 664, 674, 1557
NmeAIII GCCGAG 1 cut(s) 188
NmuCI GTSAC 1 cut(s) 25
NsbI TGCGCA 1 cut(s) 1017
NsiI ATGCAT 3 cut(s) 1071, 1699, 1991
NspI RCATGY 4 cut(s) 269, 1069, 1901, 1989
PacI TTAATTAA 1 cut(s) 1212
PaeI GCATGC 2 cut(s) 1901, 1989
PagI TCATGA 1 cut(s) 556
PceI AGGCCT 1 cut(s) 1958
PciI ACATGT 1 cut(s) 265
PcsI WCGNNNNNNNCGW 1 cut(s) 111
PctI GAATGC 2 cut(s) 1697, 1989
PfeI GAWTC 7 cut(s) 154, 358, 600, 941, 1472, 1753, 1794
Pfl23II CGTACG 1 cut(s) 363
PflMI CCANNNNNTGG 2 cut(s) 512, 2034
PfoI TCCNGGA 1 cut(s) 2041
PleI GAGTC 3 cut(s) 173, 491, 903
PluTI GGCGCC 1 cut(s) 666
PpsI GAGTC 3 cut(s) 173, 491, 903
Ppu21I YACGTR 1 cut(s) 1606
PscI ACATGT 1 cut(s) 265
PshAI GACNNNNGTC 1 cut(s) 581
PshBI ATTAAT 1 cut(s) 989
Psp6I CCWGG 3 cut(s) 735, 1408, 2109
PspGI CCWGG 3 cut(s) 735, 1408, 2109
PspLI CGTACG 1 cut(s) 363
PspN4I GGNNCC 4 cut(s) 324, 664, 674, 1557
PspPI GGNCC 2 cut(s) 80, 672
PstI CTGCAG 2 cut(s) 661, 937
PstNI CAGNNNCTG 1 cut(s) 1811
PsuI RGATCY 6 cut(s) 139, 1139, 1555, 1808, 1840, 2070
PvuII CAGCTG 3 cut(s) 509, 885, 938
RsaI GTAC 6 cut(s) 365, 645, 741, 889, 1517, 2064
RsaNI GTAC 6 cut(s) 364, 644, 740, 888, 1516, 2063
RseI CAYNNNNRTG 1 cut(s) 1095
Sau96I GGNCC 2 cut(s) 80, 672
SchI GAGTC 3 cut(s) 174, 491, 904
ScrFI CCNGG 5 cut(s) 110, 737, 1410, 2043, 2111
SduI GDGCHC 1 cut(s) 123
SfcI CTRYAG 4 cut(s) 317, 657, 933, 1812
SfoI GGCGCC 1 cut(s) 664
SinI GGWCC 1 cut(s) 672
SmiMI CAYNNNNRTG 1 cut(s) 1095
SmlI CTYRAG 2 cut(s) 1115, 1880
SmoI CTYRAG 2 cut(s) 1115, 1880
SnaBI TACGTA 1 cut(s) 1606
SphI GCATGC 2 cut(s) 1901, 1989
SseBI AGGCCT 1 cut(s) 1958
SspDI GGCGCC 1 cut(s) 662
SspI AATATT 1 cut(s) 1762
StuI AGGCCT 1 cut(s) 1958
StyD4I CCNGG 5 cut(s) 108, 735, 1408, 2041, 2109
StyI CCWWGG 1 cut(s) 2033
TaaI ACNGT 4 cut(s) 25, 353, 389, 1656
TaiI ACGT 6 cut(s) 108, 132, 776, 1608, 1776, 1923
TaqI TCGA 6 cut(s) 57, 117, 378, 751, 1470, 1923
TatI WGTACW 1 cut(s) 1515
TauI GCSGC 4 cut(s) 162, 218, 331, 463
TfiI GAWTC 7 cut(s) 154, 358, 600, 941, 1472, 1753, 1794
TscAI CASTG 1 cut(s) 394
TseFI GTSAC 1 cut(s) 25
Tsp45I GTSAC 1 cut(s) 25
TspDTI ATGAA 6 cut(s) 105, 573, 708, 1557, 1786, 1987
TspGWI ACGGA 3 cut(s) 351, 905, 1691
TspRI CASTG 1 cut(s) 394
Van91I CCANNNNNTGG 2 cut(s) 512, 2034
VpaK11BI GGWCC 1 cut(s) 672
VspI ATTAAT 1 cut(s) 989
XapI RAATTY 3 cut(s) 65, 1247, 1671
XceI RCATGY 4 cut(s) 269, 1069, 1901, 1989
XcmI CCANNNNNNNNNTGG 1 cut(s) 1764
Zsp2I ATGCAT 3 cut(s) 1071, 1699, 1991
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.