Rmu_sc0000663.1_g000021

Carboxylesterase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000663.1
OG0000306
Physical Location & Seq
Reverse (-)
84627 .. 85606
980 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000663.1_g000021.1.cds

Sequence Viewer

Length: 921 bp
atggcttccaccaccaaagaaatagcttcagagatccccaatctcatcaagcattacaaagatggcacagtcgagcgcttcttcggttttccttacgtccccccatctcttaacgacccccaaaccggtgtctcctccaaagacatcaccatctcacacaaccctttagtctctgctcgcctctacctccctcaaaacaaatctcaaaaacttcctatcttggtttacttccactgcggcggcttttgcttcgaatcggccttctcgtccatccaccaccgctacctcaaccgcctggtctcggaagctcaagttctcaccgtctcagtcgagtttaggctcgccccggaaagcccacttcctgctgcttacgacgattgttggaccgctcttcaatgggttgcttctcactcaatccatcaagatggtacttctcacaaagagccctggctagtcgatttcggggactttgataggctttacattggggctgagagcttgaatggtggtgtgaaaattttgggggctattctgtcgcacccttatttctggggatccaagccaatcgggtcggagcctaaaggtaaagacattgagaagtgtccgcaatatctgggttggaattttgtttaccctggtgctgatggaggcattgacaatccattgattaatccgatggtttcgggtgctccgagtttggccgggcttgggtgctctagattgcttgtttgtgttgcaggcaaggatgagctgagggatcgaagtgtctggtattatgatttggtgaaggaaagtgggtggaaaggagaagcggagttgtttgaagtggaagaagaggggcattgctttcatatcttgaatgagaaagagaccgagaatgttgcaaaaatgatcaaacgcttggctgcttttcttgtctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

306

Amino Acids

34.06

Weight (kDa)

5.66

Isoelectric Point (pI)

44.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000306)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19330
fragaria_vesca FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 389
AciI CCGC 7 cut(s) 237, 240, 280, 292, 387, 605, 812
AclWI GGATC 4 cut(s) 28, 549, 562, 765
AcoI YGGCCR 1 cut(s) 699
AcsI RAATTY 2 cut(s) 516, 622
AcuI CTGAAG 1 cut(s) 12
AfaI GTAC 1 cut(s) 430
AfeI AGCGCT 1 cut(s) 77
AfiI CCNNNNNNNGG 3 cut(s) 125, 301, 708
AgeI ACCGGT 1 cut(s) 125
AgsI TTSAA 4 cut(s) 395, 502, 824, 859
AjnI CCWGG 3 cut(s) 294, 446, 634
AluBI AGCT 4 cut(s) 26, 308, 498, 751
AluI AGCT 4 cut(s) 26, 308, 498, 751
Alw21I GWGCWC 2 cut(s) 691, 716
Alw26I GTCTC 5 cut(s) 136, 175, 304, 328, 863
AlwI GGATC 4 cut(s) 28, 549, 562, 765
Aor51HI AGCGCT 1 cut(s) 77
AoxI GGCC 2 cut(s) 258, 699
ApeKI GCWGC 2 cut(s) 365, 905
ApoI RAATTY 2 cut(s) 516, 622
AseI ATTAAT 1 cut(s) 669
AsiGI ACCGGT 1 cut(s) 125
AspLEI GCGC 1 cut(s) 78
AspS9I GGNCC 1 cut(s) 384
AsuC2I CCSGG 2 cut(s) 347, 703
AsuHPI GGTGA 3 cut(s) 139, 310, 796
AsuII TTCGAA 1 cut(s) 252
AvaII GGWCC 1 cut(s) 384
BamHI GGATCC 1 cut(s) 554
BanII GRGCYC 1 cut(s) 447
Bbv12I GWGCWC 2 cut(s) 691, 716
BbvCI CCTCAGC 1 cut(s) 752
BbvI GCAGC 2 cut(s) 352, 892
BccI CCATC 8 cut(s) 56, 112, 158, 278, 419, 426, 638, 670
BcgI CGANNNNNNTGC 2 cut(s) 863, 897
BciT130I CCWGG 3 cut(s) 296, 448, 636
BclI TGATCA 1 cut(s) 891
BcnI CCSGG 2 cut(s) 347, 703
BcoDI GTCTC 5 cut(s) 136, 175, 304, 328, 863
BfaI CTAG 3 cut(s) 452, 717, 919
BfoI RGCGCY 1 cut(s) 79
BisI GCNGC 4 cut(s) 238, 241, 366, 906
BlsI GCNGC 4 cut(s) 239, 242, 367, 907
Bme1390I CCNGG 5 cut(s) 296, 347, 448, 636, 703
Bme18I GGWCC 1 cut(s) 384
BmgT120I GGNCC 1 cut(s) 384
BmiI GGNNCC 2 cut(s) 556, 576
BmrFI CCNGG 5 cut(s) 296, 347, 448, 636, 703
Bpu10I CCTNAGC 1 cut(s) 752
Bpu14I TTCGAA 1 cut(s) 252
BpuEI CTTGAG 1 cut(s) 294
BpuMI CCSGG 2 cut(s) 347, 703
BsaI GGTCTC 2 cut(s) 304, 863
BsaJI CCNNGG 3 cut(s) 345, 446, 634
BsaWI WCCGGW 1 cut(s) 125
Bsc4I CCNNNNNNNGG 3 cut(s) 125, 301, 708
Bse118I RCCGGY 1 cut(s) 125
Bse3DI GCAATG 1 cut(s) 841
BseBI CCWGG 3 cut(s) 296, 448, 636
BseDI CCNNGG 3 cut(s) 345, 446, 634
BseGI GGATG 2 cut(s) 270, 751
BseLI CCNNNNNNNGG 3 cut(s) 125, 301, 708
BseMI GCAATG 1 cut(s) 841
BseMII CTCAG 3 cut(s) 339, 483, 743
BseRI GAGGAG 1 cut(s) 124
BseXI GCAGC 2 cut(s) 352, 892
BshFI GGCC 2 cut(s) 260, 701
BshTI ACCGGT 1 cut(s) 125
BsiHKAI GWGCWC 2 cut(s) 691, 716
BsiSI CCGG 3 cut(s) 126, 347, 702
BslFI GGGAC 2 cut(s) 83, 479
BslI CCNNNNNNNGG 3 cut(s) 125, 301, 708
BsmAI GTCTC 5 cut(s) 136, 175, 304, 328, 863
BsmBI CGTCTC 1 cut(s) 328
BsmFI GGGAC 2 cut(s) 83, 479
BsnI GGCC 2 cut(s) 260, 701
Bso31I GGTCTC 2 cut(s) 304, 863
Bsp119I TTCGAA 1 cut(s) 252
Bsp1286I GDGCHC 3 cut(s) 447, 691, 716
Bsp143I GATC 4 cut(s) 33, 554, 757, 891
BspACI CCGC 7 cut(s) 237, 240, 280, 292, 387, 605, 812
BspANI GGCC 2 cut(s) 260, 701
BspCNI CTCAG 3 cut(s) 338, 484, 744
BspLI GGNNCC 2 cut(s) 556, 576
BspPI GGATC 4 cut(s) 28, 549, 562, 765
BspQI GCTCTTC 1 cut(s) 396
BspT104I TTCGAA 1 cut(s) 252
BspTNI GGTCTC 2 cut(s) 304, 863
BsrBI CCGCTC 1 cut(s) 389
BsrDI GCAATG 1 cut(s) 841
BsrFI RCCGGY 1 cut(s) 125
BssAI RCCGGY 1 cut(s) 125
BssECI CCNNGG 3 cut(s) 345, 446, 634
BssMI GATC 4 cut(s) 33, 554, 757, 891
Bst2UI CCWGG 3 cut(s) 296, 448, 636
Bst4CI ACNGT 2 cut(s) 70, 322
Bst6I CTCTTC 2 cut(s) 396, 828
BstBI TTCGAA 1 cut(s) 252
BstC8I GCNNGC 3 cut(s) 178, 342, 739
BstDEI CTNAG 3 cut(s) 325, 492, 752
BstF5I GGATG 2 cut(s) 270, 751
BstH2I RGCGCY 1 cut(s) 79
BstHHI GCGC 1 cut(s) 78
BstKTI GATC 4 cut(s) 36, 557, 760, 894
BstMAI GTCTC 5 cut(s) 136, 175, 304, 328, 863
BstMBI GATC 4 cut(s) 33, 554, 757, 891
BstMWI GCNNNNNNNGC 1 cut(s) 246
BstNI CCWGG 3 cut(s) 296, 448, 636
BstSCI CCNGG 5 cut(s) 294, 345, 446, 634, 701
BstV1I GCAGC 2 cut(s) 352, 892
BstX2I RGATCY 2 cut(s) 33, 554
BstXI CCANNNNNNTGG 1 cut(s) 425
BstYI RGATCY 2 cut(s) 33, 554
BsuRI GGCC 2 cut(s) 260, 701
BtsCI GGATG 2 cut(s) 270, 751
BtsI GCAGTG 1 cut(s) 232
BtsIMutI CAGTG 1 cut(s) 232
Cac8I GCNNGC 3 cut(s) 178, 342, 739
CfoI GCGC 1 cut(s) 78
Cfr10I RCCGGY 1 cut(s) 125
Cfr13I GGNCC 1 cut(s) 384
Csp6I GTAC 1 cut(s) 429
CspAI ACCGGT 1 cut(s) 125
CviQI GTAC 1 cut(s) 429
DdeI CTNAG 3 cut(s) 325, 492, 752
DpnI GATC 4 cut(s) 35, 556, 759, 893
DpnII GATC 4 cut(s) 33, 554, 757, 891
EaeI YGGCCR 1 cut(s) 699
Eam1104I CTCTTC 2 cut(s) 396, 828
EarI CTCTTC 2 cut(s) 396, 828
Eco24I GRGCYC 1 cut(s) 447
Eco31I GGTCTC 2 cut(s) 304, 863
Eco47I GGWCC 1 cut(s) 384
Eco47III AGCGCT 1 cut(s) 77
Eco57I CTGAAG 1 cut(s) 12
EcoRII CCWGG 3 cut(s) 294, 446, 634
EcoT38I GRGCYC 1 cut(s) 447
Esp3I CGTCTC 1 cut(s) 328
FaiI YATR 2 cut(s) 777, 852
FaqI GGGAC 2 cut(s) 83, 479
FbaI TGATCA 1 cut(s) 891
Fnu4HI GCNGC 4 cut(s) 238, 241, 366, 906
FokI GGATG 2 cut(s) 257, 758
FriOI GRGCYC 1 cut(s) 447
Fsp4HI GCNGC 4 cut(s) 238, 241, 366, 906
FspBI CTAG 3 cut(s) 452, 717, 919
GlaI GCGC 1 cut(s) 77
GluI GCNGC 4 cut(s) 238, 241, 366, 906
HaeII RGCGCY 1 cut(s) 79
HaeIII GGCC 2 cut(s) 260, 701
HapII CCGG 3 cut(s) 126, 347, 702
HhaI GCGC 1 cut(s) 78
Hin6I GCGC 1 cut(s) 76
HinP1I GCGC 1 cut(s) 76
HinfI GANTC 1 cut(s) 254
HpaII CCGG 3 cut(s) 126, 347, 702
HphI GGTGA 3 cut(s) 139, 310, 796
Hpy166II GTNNAC 2 cut(s) 226, 631
Hpy188I TCNGA 5 cut(s) 31, 304, 574, 675, 693
Hpy188III TCNNGA 3 cut(s) 422, 717, 856
Hpy8I GTNNAC 2 cut(s) 226, 631
Hpy99I CGWCG 1 cut(s) 377
HpyAV CCTTC 2 cut(s) 271, 781
HpyCH4III ACNGT 2 cut(s) 70, 322
HpyCH4IV ACGT 1 cut(s) 96
HpyCH4V TGCA 2 cut(s) 737, 884
HpyF10VI GCNNNNNNNGC 1 cut(s) 246
HpyF3I CTNAG 3 cut(s) 325, 492, 752
HpySE526I ACGT 1 cut(s) 96
HspAI GCGC 1 cut(s) 76
Ksp22I TGATCA 1 cut(s) 891
Kzo9I GATC 4 cut(s) 33, 554, 757, 891
LguI GCTCTTC 1 cut(s) 396
LmnI GCTCC 2 cut(s) 574, 694
Lsp1109I GCAGC 2 cut(s) 352, 892
MaeI CTAG 3 cut(s) 452, 717, 919
MaeII ACGT 1 cut(s) 96
MalI GATC 4 cut(s) 35, 556, 759, 893
MbiI CCGCTC 1 cut(s) 389
MboI GATC 4 cut(s) 33, 554, 757, 891
MboII GAAGA 4 cut(s) 73, 383, 842, 845
MflI RGATCY 2 cut(s) 33, 554
MhlI GDGCHC 3 cut(s) 447, 691, 716
MluCI AATT 2 cut(s) 516, 622
MmeI TCCRAC 3 cut(s) 362, 552, 599
MnlI CCTC 8 cut(s) 145, 191, 197, 201, 296, 641, 747, 829
MseI TTAA 2 cut(s) 111, 669
MslI CAYNNNNRTG 1 cut(s) 423
MspI CCGG 3 cut(s) 126, 347, 702
MspR9I CCNGG 5 cut(s) 296, 347, 448, 636, 703
MvaI CCWGG 3 cut(s) 296, 448, 636
MwoI GCNNNNNNNGC 1 cut(s) 246
NciI CCSGG 2 cut(s) 347, 703
NdeII GATC 4 cut(s) 33, 554, 757, 891
NlaIV GGNNCC 2 cut(s) 556, 576
NspV TTCGAA 1 cut(s) 252
PciSI GCTCTTC 1 cut(s) 396
PcsI WCGNNNNNNNCGW 2 cut(s) 263, 689
PfeI GAWTC 1 cut(s) 254
PinAI ACCGGT 1 cut(s) 125
PkrI GCNGC 4 cut(s) 239, 242, 367, 907
PshBI ATTAAT 1 cut(s) 669
Psp6I CCWGG 3 cut(s) 294, 446, 634
PspGI CCWGG 3 cut(s) 294, 446, 634
PspN4I GGNNCC 2 cut(s) 556, 576
PspPI GGNCC 1 cut(s) 384
PsuI RGATCY 2 cut(s) 33, 554
RsaI GTAC 1 cut(s) 430
RsaNI GTAC 1 cut(s) 429
RseI CAYNNNNRTG 1 cut(s) 423
SapI GCTCTTC 1 cut(s) 396
SaqAI TTAA 2 cut(s) 111, 669
SatI GCNGC 4 cut(s) 238, 241, 366, 906
Sau3AI GATC 4 cut(s) 33, 554, 757, 891
Sau96I GGNCC 1 cut(s) 384
ScrFI CCNGG 5 cut(s) 296, 347, 448, 636, 703
SduI GDGCHC 3 cut(s) 447, 691, 716
SetI ASST 8 cut(s) 28, 99, 189, 288, 310, 500, 586, 753
SfuI TTCGAA 1 cut(s) 252
SinI GGWCC 1 cut(s) 384
SmiMI CAYNNNNRTG 1 cut(s) 423
SmlI CTYRAG 1 cut(s) 309
SmoI CTYRAG 1 cut(s) 309
Sse9I AATT 2 cut(s) 516, 622
SsiI CCGC 7 cut(s) 237, 240, 280, 292, 387, 605, 812
SspMI CTAG 3 cut(s) 452, 717, 919
StyD4I CCNGG 5 cut(s) 294, 345, 446, 634, 701
TaaI ACNGT 2 cut(s) 70, 322
TaiI ACGT 1 cut(s) 99
TaqI TCGA 5 cut(s) 72, 252, 330, 456, 760
TaqII GACCGA 1 cut(s) 887
TasI AATT 2 cut(s) 516, 622
TauI GCSGC 2 cut(s) 240, 243
TfiI GAWTC 1 cut(s) 254
Tru1I TTAA 2 cut(s) 111, 669
Tru9I TTAA 2 cut(s) 111, 669
TscAI CASTG 1 cut(s) 239
TseI GCWGC 2 cut(s) 365, 905
TspDTI ATGAA 1 cut(s) 839
TspRI CASTG 1 cut(s) 239
VpaK11BI GGWCC 1 cut(s) 384
VspI ATTAAT 1 cut(s) 669
XapI RAATTY 2 cut(s) 516, 622
XbaI TCTAGA 1 cut(s) 716
XspI CTAG 3 cut(s) 452, 717, 919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.