Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0000306

Physical Location & Seq

Genomic Coordinates Forward (+)

35241433 .. 35246588

Gene Structure 5156 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG205100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGTGTCAACAGCCCGAGCATCAACAACTCATTGTTGATAATGGTGCATTGTCTCATCTAGTAGATTTGTTGAAGAGGCACAAGGATAGTCATGTAACTCGACCTTTGTATAGCGTCATTCGTAGAGCTGCTGATGCCATCACCAATCTCGCTCATGAAAACAGCAGCATTAAAACCCGTGTCAGGATAGAAGGTGGAATTCCACCTCTAGTTGAGTTGCTTGAATTTGCTGATACAAAGGTGCAAAGAGCAGCTGCTGGAGCGCTACGAACCCTCGCATTTAAAAATGATGAGAATAAGAATCAGATTGTTGAATGCAATGCTCTTCCTACCCTCATTTTAATGCTTCGATCTGAAGATGCTGCTATACATTACGAAGCGGTTGGTGTAATTGGAAATCTAGTTCACTCTTCTCCAAACATAAAGAAAGAGGTTCTTCTTGCGGGAGCTTTACAACCTGTTATTGGATTGCTTAGTTCCTGCTGCTTTGAGAGCCAAAGAGAGGCAGCTTTGCTACTTGGACAATTTGCTGCAACTGATTCAGACTGCAAGGTTCACATTGTACAGAGGGGTGCTGTCCGACCTTTGATTGAGATGCTTCAATCCCCAGATGTACAACTCAGGGAGATGTCAGCTTTTGCTTTGGGGAGGTTGGCACAGGACTCACACAACCAAGCTGGTATTGCTCATAATGGTGGTTTATTGCCATTGTTGAAACTTCTGGATTCAAAAAATGGGTCTCTGCAACACAATGCTGCATTTACCCTTTACGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTTGGTGGTGTTCAGAAGTTGCAGGATGGAGAATTTATTTTCCAAGCTACAAAGGATTGTGTGACCAAAACATTGAAAAGATTAGAGGAGAAGATTCATGCACGAGTTTTGTCGCATTTGTTATACTTGATGCGTGTAGCAGAGAGAAATGTCCAAAGACGTGTTGCTTTGGCTTTTGCTCATCTTTGCTCCCCAGAGGATCTCAGAACCATTTTCATCGATAACAATGGTTTGGAATTGCTTCTTGGGCTTCTTGGTTCTAGTAGCCCCAAACAGCAGCTTGATGGTGCTATGGCTCTGTACAAGTTGGCCAACAAAGCCATGACTCTTTCTCCTGTGGATGCAGCTCCTCCATCTCCAACACCACAGGTTTATCTAGGGGAGCAGTATGTAAACAACCCTACGCTGTCCGATGTTACGTTTTTAGTTGAAGGTAGACGGTTCTATGCTCACAGAATTTGCCTGCTTGCTTCTTCAGATGCTTTTCGTGCAATGTTTGATGGTGGTTACCGGGAGAAGGATGCAAGGGACATCGAAATACCAAATATTAGATGGGAGGTTTTTGAGTTGATGATGAGATTTATATACACCGGATCAGTAGACATTACTTTGGATATTGCTCAAGATCTCCTCAGAGCTGCAGATCAGTATCTTTTGGAGGGACTCAAGCGGCTTTGTGAGTATTCAATAGCACAGGACATATCTTTGGAGAATGTTTCAAACATGTATGAACTTTCAGAAGCCTTCCATGCAATGTCATTAAGGCAAACATGTATTTTGTTTATCTTGGAGCAGTTCGAAAAATTGAGTGCTAGACCAGGGCACTGTGAACTGATCAAGAATATATTGGATGAGATCAGATCTTACTTTACTAAAGCACTCACTAAGCCTAACCCACATAACTTGCGGCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005886 GO:0006950 GO:0006970 GO:0008150 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009737 GO:0010029 GO:0010033 GO:0010187 GO:0016020 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048519 GO:0048580 GO:0048581 GO:0050789 GO:0050793 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0065007 GO:0071944 GO:0097305 GO:1900140 GO:1901700 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm BTB

Protein Analysis

575

Amino Acids

64.11

Weight (kDa)

6.24

Isoelectric Point (pI)

48.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ARM_ARMC5	PF24768	2 - 252	6.3e-18	ARMC5
ARM_PUB	PF25598	43 - 278	7.9e-07	Plant U-box protein ARM repeat region
Arm	PF00514	61 - 93	4.2e-07	Armadillo/beta-catenin-like repeat
Arm	PF00514	96 - 135	1.5e-07	Armadillo/beta-catenin-like repeat
BTB	PF00651	403 - 503	2.5e-25	BTB/POZ domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000306)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19330
fragaria_vesca	FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica	MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica	Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis	pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis	RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata	RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora	Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii	Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa	Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha	Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana	Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	1249, 1413
AciI	CCGC	4 cut(s)	380, 443, 1483, 1720
AclWI	GGATC	2 cut(s)	1020, 1414
AcoI	YGGCCR	1 cut(s)	1122
AcsI	RAATTY	4 cut(s)	198, 224, 845, 1269
AcuI	CTGAAG	2 cut(s)	375, 1272
AfaI	GTAC	3 cut(s)	564, 615, 1115
AfeI	AGCGCT	1 cut(s)	264
AfiI	CCNNNNNNNGG	4 cut(s)	183, 464, 502, 1330
AflIII	ACRYGT	3 cut(s)	973, 1536, 1583
AjiI	CACGTC	1 cut(s)	974
AjnI	CCWGG	1 cut(s)	1630
AjuI	GAANNNNNNNTTGG	2 cut(s)	1041, 1073
AloI	GAACNNNNNNTCC	2 cut(s)	387, 419
Alw26I	GTCTC	2 cut(s)	57, 744
AlwI	GGATC	2 cut(s)	1020, 1414
AlwNI	CAGNNNCTG	1 cut(s)	257
Ama87I	CYCGRG	1 cut(s)	14
Aor51HI	AGCGCT	1 cut(s)	264
AoxI	GGCC	2 cut(s)	772, 1122
ApoI	RAATTY	4 cut(s)	198, 224, 845, 1269
ArsI	GACNNNNNNTTYG	2 cut(s)	722, 754
Asp700I	GAANNNNTTC	1 cut(s)	1053
AspLEI	GCGC	1 cut(s)	265
AsuC2I	CCSGG	1 cut(s)	1325
AsuHPI	GGTGA	1 cut(s)	133
AsuII	TTCGAA	1 cut(s)	1611
AvaI	CYCGRG	1 cut(s)	14
BaeGI	GKGCMC	1 cut(s)	1638
BaeI	ACNNNNGTAYC	2 cut(s)	225, 258
BalI	TGGCCA	1 cut(s)	1124
BauI	CACGAG	1 cut(s)	915
BccI	CCATC	6 cut(s)	146, 833, 1091, 1174, 1307, 1359
BceAI	ACGGC	1 cut(s)	787
BciT130I	CCWGG	1 cut(s)	1632
BclI	TGATCA	1 cut(s)	1647
BcnI	CCSGG	1 cut(s)	1325
BcoDI	GTCTC	2 cut(s)	57, 744
BfaI	CTAG	6 cut(s)	59, 209, 401, 1074, 1190, 1626
BfmI	CTRYAG	2 cut(s)	1452, 1724
BfoI	RGCGCY	1 cut(s)	266
BglII	AGATCT	2 cut(s)	1438, 1673
Bme1390I	CCNGG	2 cut(s)	1325, 1632
BmeT110I	CYCGRG	1 cut(s)	14
BmgBI	CACGTC	1 cut(s)	974
BmrFI	CCNGG	2 cut(s)	1325, 1632
BmsI	GCATC	8 cut(s)	28, 124, 349, 585, 933, 1144, 1282, 1324
BpmI	CTGGAG	1 cut(s)	279
Bpu14I	TTCGAA	1 cut(s)	1611
BpuEI	CTTGAG	2 cut(s)	1419, 1463
BpuMI	CCSGG	1 cut(s)	1325
Bsa29I	ATCGAT	1 cut(s)	1032
BsaBI	GATNNNNATC	1 cut(s)	1461
BsaI	GGTCTC	1 cut(s)	744
BsaJI	CCNNGG	1 cut(s)	1631
BsaWI	WCCGGW	1 cut(s)	1403
BsaXI	ACNNNNNCTCC	2 cut(s)	1129, 1159
Bsc4I	CCNNNNNNNGG	4 cut(s)	183, 464, 502, 1330
Bse3DI	GCAATG	3 cut(s)	325, 1311, 1572
Bse8I	GATNNNNATC	1 cut(s)	1461
BseBI	CCWGG	1 cut(s)	1632
BseCI	ATCGAT	1 cut(s)	1032
BseDI	CCNNGG	1 cut(s)	1631
BseGI	GGATG	4 cut(s)	844, 1159, 1339, 1669
BseJI	GATNNNNATC	1 cut(s)	1461
BseLI	CCNNNNNNNGG	4 cut(s)	183, 464, 502, 1330
BseMI	GCAATG	3 cut(s)	325, 1311, 1572
BseMII	CTCAG	3 cut(s)	634, 1030, 1459
BseRI	GAGGAG	3 cut(s)	914, 1152, 1433
BseSI	GKGCMC	1 cut(s)	1638
BshFI	GGCC	2 cut(s)	774, 1124
BshVI	ATCGAT	1 cut(s)	1032
BsiHKCI	CYCGRG	1 cut(s)	14
BsiSI	CCGG	2 cut(s)	1324, 1404
BslFI	GGGAC	2 cut(s)	1355, 1488
BslI	CCNNNNNNNGG	4 cut(s)	183, 464, 502, 1330
BsmAI	GTCTC	2 cut(s)	57, 744
BsmFI	GGGAC	2 cut(s)	1355, 1488
BsmI	GAATGC	1 cut(s)	320
BsnI	GGCC	2 cut(s)	774, 1124
Bso31I	GGTCTC	1 cut(s)	744
BsoBI	CYCGRG	1 cut(s)	14
Bsp119I	TTCGAA	1 cut(s)	1611
Bsp1286I	GDGCHC	1 cut(s)	1638
Bsp1407I	TGTACA	3 cut(s)	562, 613, 1113
Bsp143I	GATC	8 cut(s)	350, 1012, 1406, 1438, 1456, 1647, 1668, 1673
BspACI	CCGC	4 cut(s)	380, 443, 1483, 1720
BspANI	GGCC	2 cut(s)	774, 1124
BspCNI	CTCAG	3 cut(s)	633, 1029, 1458
BspDI	ATCGAT	1 cut(s)	1032
BspHI	TCATGA	1 cut(s)	154
BspMAI	CTGCAG	1 cut(s)	1456
BspPI	GGATC	2 cut(s)	1020, 1414
BspQI	GCTCTTC	1 cut(s)	330
BspT104I	TTCGAA	1 cut(s)	1611
BspTNI	GGTCTC	1 cut(s)	744
BsrDI	GCAATG	3 cut(s)	325, 1311, 1572
BsrGI	TGTACA	3 cut(s)	562, 613, 1113
BssECI	CCNNGG	1 cut(s)	1631
BssMI	GATC	8 cut(s)	350, 1012, 1406, 1438, 1456, 1647, 1668, 1673
BssSI	CACGAG	1 cut(s)	915
Bst2BI	CACGAG	1 cut(s)	915
Bst2UI	CCWGG	1 cut(s)	1632
Bst4CI	ACNGT	2 cut(s)	1254, 1640
Bst6I	CTCTTC	3 cut(s)	68, 330, 415
BstAUI	TGTACA	3 cut(s)	562, 613, 1113
BstBI	TTCGAA	1 cut(s)	1611
BstC8I	GCNNGC	2 cut(s)	1277, 1281
BstDEI	CTNAG	5 cut(s)	473, 620, 1016, 1445, 1698
BstEII	GGTNACC	1 cut(s)	1319
BstF5I	GGATG	4 cut(s)	844, 1159, 1339, 1669
BstH2I	RGCGCY	1 cut(s)	266
BstHHI	GCGC	1 cut(s)	265
BstKTI	GATC	8 cut(s)	353, 1015, 1409, 1441, 1459, 1650, 1671, 1676
BstMAI	GTCTC	2 cut(s)	57, 744
BstMBI	GATC	8 cut(s)	350, 1012, 1406, 1438, 1456, 1647, 1668, 1673
BstMWI	GCNNNNNNNGC	8 cut(s)	134, 260, 492, 683, 1060, 1130, 1301, 1562
BstNI	CCWGG	1 cut(s)	1632
BstNSI	RCATGY	2 cut(s)	1540, 1587
BstPI	GGTNACC	1 cut(s)	1319
BstSCI	CCNGG	2 cut(s)	1323, 1630
BstSFI	CTRYAG	2 cut(s)	1452, 1724
BstSLI	GKGCMC	1 cut(s)	1638
BstX2I	RGATCY	3 cut(s)	1012, 1438, 1673
BstYI	RGATCY	3 cut(s)	1012, 1438, 1673
Bsu15I	ATCGAT	1 cut(s)	1032
BsuRI	GGCC	2 cut(s)	774, 1124
BsuTUI	ATCGAT	1 cut(s)	1032
BtrI	CACGTC	1 cut(s)	974
BtsCI	GGATG	4 cut(s)	844, 1159, 1339, 1669
BtsIMutI	CAGTG	1 cut(s)	1636
Cac8I	GCNNGC	2 cut(s)	1277, 1281
CaiI	CAGNNNCTG	1 cut(s)	257
CciI	TCATGA	1 cut(s)	154
CfoI	GCGC	1 cut(s)	265
ClaI	ATCGAT	1 cut(s)	1032
CseI	GACGC	1 cut(s)	103
Csp6I	GTAC	3 cut(s)	563, 614, 1114
CspCI	CAANNNNNGTGG	1 cut(s)	1698
CviAII	CATG	7 cut(s)	92, 155, 911, 1135, 1537, 1562, 1584
CviQI	GTAC	3 cut(s)	563, 614, 1114
DdeI	CTNAG	5 cut(s)	473, 620, 1016, 1445, 1698
DpnI	GATC	8 cut(s)	352, 1014, 1408, 1440, 1458, 1649, 1670, 1675
DpnII	GATC	8 cut(s)	350, 1012, 1406, 1438, 1456, 1647, 1668, 1673
DraI	TTTAAA	1 cut(s)	283
EaeI	YGGCCR	1 cut(s)	1122
Eam1104I	CTCTTC	3 cut(s)	68, 330, 415
EarI	CTCTTC	3 cut(s)	68, 330, 415
Eco31I	GGTCTC	1 cut(s)	744
Eco47III	AGCGCT	1 cut(s)	264
Eco57I	CTGAAG	2 cut(s)	375, 1272
Eco88I	CYCGRG	1 cut(s)	14
Eco91I	GGTNACC	1 cut(s)	1319
EcoO65I	GGTNACC	1 cut(s)	1319
EcoRI	GAATTC	1 cut(s)	198
EcoRII	CCWGG	1 cut(s)	1630
FaeI	CATG	7 cut(s)	95, 158, 914, 1138, 1540, 1565, 1587
FalI	AAGNNNNNCTT	2 cut(s)	420, 452
FaqI	GGGAC	2 cut(s)	1355, 1488
FatI	CATG	7 cut(s)	91, 154, 910, 1134, 1536, 1561, 1583
FauI	CCCGC	1 cut(s)	436
FbaI	TGATCA	1 cut(s)	1647
FblI	GTMKAC	2 cut(s)	1249, 1413
FokI	GGATG	4 cut(s)	851, 1166, 1346, 1676
FspBI	CTAG	6 cut(s)	59, 209, 401, 1074, 1190, 1626
GlaI	GCGC	1 cut(s)	264
GsuI	CTGGAG	1 cut(s)	279
HaeII	RGCGCY	1 cut(s)	266
HaeIII	GGCC	2 cut(s)	774, 1124
HapII	CCGG	2 cut(s)	1324, 1404
HgaI	GACGC	1 cut(s)	103
HhaI	GCGC	1 cut(s)	265
Hin1II	CATG	7 cut(s)	95, 158, 914, 1138, 1540, 1565, 1587
Hin6I	GCGC	1 cut(s)	263
HinP1I	GCGC	1 cut(s)	263
HincII	GTYRAC	1 cut(s)	8
HindII	GTYRAC	1 cut(s)	8
HinfI	GANTC	7 cut(s)	301, 539, 662, 725, 907, 1138, 1476
HpaII	CCGG	2 cut(s)	1324, 1404
HphI	GGTGA	1 cut(s)	133
Hpy166II	GTNNAC	7 cut(s)	8, 406, 556, 1207, 1250, 1414, 1643
Hpy188III	TCNNGA	5 cut(s)	155, 184, 722, 1436, 1651
Hpy8I	GTNNAC	7 cut(s)	8, 406, 556, 1207, 1250, 1414, 1643
HpyAV	CCTTC	4 cut(s)	185, 1238, 1324, 1567
HpyCH4III	ACNGT	2 cut(s)	1254, 1640
HpyCH4IV	ACGT	2 cut(s)	973, 1232
HpyF10VI	GCNNNNNNNGC	8 cut(s)	134, 260, 492, 683, 1060, 1130, 1301, 1562
HpyF3I	CTNAG	5 cut(s)	473, 620, 1016, 1445, 1698
HpySE526I	ACGT	2 cut(s)	973, 1232
Hsp92II	CATG	7 cut(s)	95, 158, 914, 1138, 1540, 1565, 1587
HspAI	GCGC	1 cut(s)	263
Ksp22I	TGATCA	1 cut(s)	1647
Kzo9I	GATC	8 cut(s)	350, 1012, 1406, 1438, 1456, 1647, 1668, 1673
LguI	GCTCTTC	1 cut(s)	330
LmnI	GCTCC	6 cut(s)	260, 446, 1007, 1165, 1195, 1603
LweI	GCATC	8 cut(s)	28, 124, 349, 585, 933, 1144, 1282, 1324
MaeI	CTAG	6 cut(s)	59, 209, 401, 1074, 1190, 1626
MaeII	ACGT	2 cut(s)	973, 1232
MaeIII	GTNAC	4 cut(s)	94, 874, 1228, 1319
MalI	GATC	8 cut(s)	352, 1014, 1408, 1440, 1458, 1649, 1670, 1675
MboI	GATC	8 cut(s)	350, 1012, 1406, 1438, 1456, 1647, 1668, 1673
MboII	GAAGA	7 cut(s)	85, 317, 368, 402, 428, 916, 1278
MflI	RGATCY	3 cut(s)	1012, 1438, 1673
MhlI	GDGCHC	1 cut(s)	1638
MlsI	TGGCCA	1 cut(s)	1124
MluCI	AATT	8 cut(s)	198, 224, 390, 524, 845, 1049, 1269, 1616
MluNI	TGGCCA	1 cut(s)	1124
MlyI	GAGTC	3 cut(s)	656, 1132, 1470
MmeI	TCCRAC	2 cut(s)	604, 1196
Mox20I	TGGCCA	1 cut(s)	1124
MroXI	GAANNNNTTC	1 cut(s)	1053
MscI	TGGCCA	1 cut(s)	1124
MseI	TTAA	4 cut(s)	171, 282, 341, 1574
MslI	CAYNNNNRTG	2 cut(s)	341, 693
Msp20I	TGGCCA	1 cut(s)	1124
MspA1I	CMGCKG	1 cut(s)	254
MspI	CCGG	2 cut(s)	1324, 1404
MspR9I	CCNGG	2 cut(s)	1325, 1632
Mva1269I	GAATGC	1 cut(s)	320
MvaI	CCWGG	1 cut(s)	1632
MwoI	GCNNNNNNNGC	8 cut(s)	134, 260, 492, 683, 1060, 1130, 1301, 1562
NciI	CCSGG	1 cut(s)	1325
NdeII	GATC	8 cut(s)	350, 1012, 1406, 1438, 1456, 1647, 1668, 1673
NlaIII	CATG	7 cut(s)	95, 158, 914, 1138, 1540, 1565, 1587
NmuCI	GTSAC	1 cut(s)	874
NspI	RCATGY	2 cut(s)	1540, 1587
NspV	TTCGAA	1 cut(s)	1611
PagI	TCATGA	1 cut(s)	154
PciI	ACATGT	2 cut(s)	1536, 1583
PciSI	GCTCTTC	1 cut(s)	330
PctI	GAATGC	1 cut(s)	320
PdmI	GAANNNNTTC	1 cut(s)	1053
PfeI	GAWTC	4 cut(s)	301, 539, 725, 907
PleI	GAGTC	3 cut(s)	656, 1132, 1470
PpsI	GAGTC	3 cut(s)	656, 1132, 1470
PscI	ACATGT	2 cut(s)	1536, 1583
Psp6I	CCWGG	1 cut(s)	1630
PspEI	GGTNACC	1 cut(s)	1319
PspGI	CCWGG	1 cut(s)	1630
PstI	CTGCAG	1 cut(s)	1456
PstNI	CAGNNNCTG	1 cut(s)	257
PsuI	RGATCY	3 cut(s)	1012, 1438, 1673
PvuII	CAGCTG	1 cut(s)	254
RsaI	GTAC	3 cut(s)	564, 615, 1115
RsaNI	GTAC	3 cut(s)	563, 614, 1114
RseI	CAYNNNNRTG	2 cut(s)	341, 693
SapI	GCTCTTC	1 cut(s)	330
SaqAI	TTAA	4 cut(s)	171, 282, 341, 1574
Sau3AI	GATC	8 cut(s)	350, 1012, 1406, 1438, 1456, 1647, 1668, 1673
SchI	GAGTC	3 cut(s)	656, 1132, 1470
ScrFI	CCNGG	2 cut(s)	1325, 1632
SduI	GDGCHC	1 cut(s)	1638
SfaNI	GCATC	8 cut(s)	28, 124, 349, 585, 933, 1144, 1282, 1324
SfcI	CTRYAG	2 cut(s)	1452, 1724
SfuI	TTCGAA	1 cut(s)	1611
SmiMI	CAYNNNNRTG	2 cut(s)	341, 693
SmlI	CTYRAG	2 cut(s)	1434, 1478
SmoI	CTYRAG	2 cut(s)	1434, 1478
Sse9I	AATT	8 cut(s)	198, 224, 390, 524, 845, 1049, 1269, 1616
SsiI	CCGC	4 cut(s)	380, 443, 1483, 1720
SspI	AATATT	1 cut(s)	1360
SspMI	CTAG	6 cut(s)	59, 209, 401, 1074, 1190, 1626
StyD4I	CCNGG	2 cut(s)	1323, 1630
TaaI	ACNGT	2 cut(s)	1254, 1640
TaiI	ACGT	2 cut(s)	976, 1235
TaqI	TCGA	5 cut(s)	100, 349, 1032, 1347, 1611
TasI	AATT	8 cut(s)	198, 224, 390, 524, 845, 1049, 1269, 1616
TatI	WGTACW	3 cut(s)	562, 613, 1113
TauI	GCSGC	2 cut(s)	1486, 1723
TfiI	GAWTC	4 cut(s)	301, 539, 725, 907
Tru1I	TTAA	4 cut(s)	171, 282, 341, 1574
Tru9I	TTAA	4 cut(s)	171, 282, 341, 1574
TscAI	CASTG	1 cut(s)	1643
TseFI	GTSAC	1 cut(s)	874
Tsp45I	GTSAC	1 cut(s)	874
TspDTI	ATGAA	4 cut(s)	171, 899, 1018, 1557
TspRI	CASTG	1 cut(s)	1643
XapI	RAATTY	4 cut(s)	198, 224, 845, 1269
XceI	RCATGY	2 cut(s)	1540, 1587
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1362
XmiI	GTMKAC	2 cut(s)	1249, 1413
XmnI	GAANNNNTTC	1 cut(s)	1053
XspI	CTAG	6 cut(s)	59, 209, 401, 1074, 1190, 1626

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.