Rh6DG327800

Arm repeat protein interacting with

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
53280846 .. 53286201
5356 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG327800.1

Sequence Viewer

Length: 2136 bp
ATGGACCGCCGCTCCGTCACCACCAGACGCCGCAGTCTGAAGCGGAAGCTGGAACAAGACTTCGTAGAAGAAACCCAAGAAAACGAGCCGGATCGTAAATCTCCGGCCGTCGATCCCCAAGATCCGCTTCTTGAGATTCGCGCCCACGTCAAGGTTCTCGACTCCACCTTCTCCGCCTCCGACGCCGACCGCGCCGCCGCCAAGGTCGCCGCCCGAGCCCTCGTCGAACTCGCCAAGAACGAGGACAATCTGAAAGACTTAGTGGAATGCGGAGCGGTTCCGGCTCTGGTTAAGCATCTACGGACGCCGCCGCCGGAGAGAGGCGGAAGCCACAGTCCGATTCCGTGTGAGCACGAGGTCGAGAAAGAAAGTGCTTTCGCGCTTAATCTCATCGCCGTTAAGCCGGAGAATCAACATCTCATAGTTGATGCTGGAGGTTTGTCGCCTCTTATTGATCTGTTAAAGAGGCACAAGAGTAGTAGTGGCTCAAATGCGGGGGCGGTTGATGGTGTTATCAGGAGAGCTGCGGATGCAATCTGTAACATTTCTCATGAGAATAGCAACATTAAAAACCTTGTCAGGATTGAAGGTGGTATCCCTCCTCTTGTGGAGTTGCTTAACTTCTTTGACACAAAGGTACAGAGGGCAGCTGCAGGGGCCCTGAAGATCCTAGCATTCAAAAATGACGAAAACAAAAATCAGATTGTTGAGTGCAATGCTTTGCCTAACCTGGTACTTATGCTGCGATCTGAGATTGCAACTATGACTTATGAAGCAGTTGGTGTAATTGGTAATCTTGTCCACTCTTCCCCAAGCATCAAGAAACTTGTTCTTGTTGCTGGTGCTTTACAACCTGTTATTGATTTACTGAGTTCACCTTGTTTGGAAAGCCAAAGAGAAGCTGCTCTATTACTTGGTCAGTTTGCTACGGCTGATTCAGATTGCAAGGCACACATTGTTCAAAGGGGAGCGGTACAACCATTAATTAAGATGCTCCAGTCACCTGATTCACAGGTCAAGGAGATGTCGGCTTTTGCAATTGGGAGGTTGGCACAGGACACACATAACCAAGCTGGCATTGCTCATAATGGTGGCATAGTGCCTCTACTCAAGTTACTTGATTCGAAAAATGAATCTCTGCAACACAATGCTGCATTTGCTCTATATGGTCTTGCAGATAATGAGGACAACATTGCAGCTCTTATTAAATTTGGAATTGTCCAGAAATTTCAAGATGGAGAATTCCTTGTTCAACGAACTAAGGATTGTGTTGAAAAGACATTGAAAAGATTAGAGGGGAAGATTTGTGGTCGAGTATTGAACAATCTATTATATCTGATGCGGGTTGCTGACAAGGCTATTCAATGTCGAGTGGCTTTGGCTTTTGCTCATCTTTGTAAGCCTGGTGATCGTCAAGTCATTTTTATTGAACACAAAGGATTGGAGCTGCTGGTGGGGCTTCTTGAGTCTAAAAGCCTGAAGCAGCAACATGATGGTTCATTGGCCTTGCACACATTGGCTACAAAAGCCTCTCCACTCTCTCATGTAGATGCAGTTCCTCCAGCACCAAACTCACAGGTGTATTTGGGTGAGCAATATGTAAACAATCTGACACTTTCTGACATAACATTCTTAGTTGACGGTAAACAGTTTTATGCACACAGAATTTGTCTGCTTGCTTCTTCGGAAGCATTTCGAGCCATGTTTGATGGTGGATACAGGGAGAGAGATGCCAAGGATGTAGAGATTCCAAATATTAGATGGGACGTTTTTGAACTGATGATGAGATTCATATACACGGGATCAGTTGAAGTCGATTTGGATATTGCTCACGATCTCCTCAAAGCTGCTGATCAGTATCTTTTAGAAGGTCTAAAGCGTCAATGTGAACATGCCATTGCTCAGGATATCTGTGTGGAAAATGTGTCTCTCATGTTTGAGTTATCAGAGGCCTATAATGCCATGTCGTTGATGCAAGCATGCATTCTGTTTGTACTAGAGCAGTTTGATAAGTTGAGCAAGAAACCATGGTTTCATCCACTAATGAAACGAATCATACCGGAGATCCACAGATTTTTCACTAAAGCACTTACAAAGCCTAACCAGGGTGGTTCGTCGCAGGATAAACTTGCATAG

Protein Analysis

711

Amino Acids

78.43

Weight (kDa)

6.44

Isoelectric Point (pI)

41.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ARM_ARMC5 PF24768 168 - 408 2.3e-15 ARMC5
ARM_PUB PF25598 178 - 370 1.6e-07 Plant U-box protein ARM repeat region
Arm PF00514 190 - 224 9e-06 Armadillo/beta-catenin-like repeat
BTB PF00651 536 - 635 4.2e-24 BTB/POZ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000306)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G19330
fragaria_vesca FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_2g23530 FvH4_4g15010 FvH4_4g15020 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040 FvH4_4g15040
malus_domestica MD03G1264200.v1.1 MD03G1264700.v1.1 MD11G1284800.v1.1 MD13G1187400.v1.1 MD13G1187500.v1.1 MD13G1187900.v1.1 MD13G1188000.v1.1 MD16G1188100.v1.1 MD16G1188500.v1.1 MD16G1188600.v1.1
prunus_persica Prupe.1G154900_v2.0.a1 Prupe.1G155100_v2.0.a1 Prupe.1G155200_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.1G155300_v2.0.a1 Prupe.8G240700_v2.0.a1
pyrus_communis pycom03g21190 pycom11g25240 pycom11g25250 pycom13g16210 pycom13g16230 pycom13g16240 pycom16g15820
rosa_chinensis RchiOBHm_Chr1g0343661 RchiOBHm_Chr4g0416821 RchiOBHm_Chr4g0416831 RchiOBHm_Chr4g0416841 RchiOBHm_Chr4g0416871 RchiOBHm_Chr4g0416951 RchiOBHm_Chr4g0416961 RchiOBHm_Chr6g0291001
rosa_laevigata RLG00000007939 RLG00000007940 RLG00000007944 RLG00000007945 RLG00000007946 RLG00000007954 RLG00000012156 RLG00000028955
rosa_multiflora Rmu_co8241865.1_g000001 Rmu_sc0000021.1_g000004 Rmu_sc0000663.1_g000003 Rmu_sc0000663.1_g000009 Rmu_sc0000663.1_g000012 Rmu_sc0000663.1_g000013 Rmu_sc0000663.1_g000021 Rmu_sc0000663.1_g000029 Rmu_sc0014328.1_g000002 Rmu_sc0014328.1_g000003 Rmu_sc0020688.1_g000001 Rmu_sc0024683.1_g000001 Rmu_sc0024683.1_g000002 Rmu_sc0033477.1_g000001 Rmu_sc0035872.1_g000001 Rmu_ssc0000010.1_g000006 Rmu_ssc0000010.1_g000008 Rmu_ssc0000010.1_g000011
rosa_roxburghii Rroxscaffold_4G00310390 Rroxscaffold_5G00360700 Rroxscaffold_5G00360710 Rroxscaffold_5G00360720 Rroxscaffold_5G00360750 Rroxscaffold_5G00360800 Rroxscaffold_5G00360820 Rroxscaffold_7G00176470
rosa_rugosa Rorug04G0145200 Rorug04G0145300 Rorug04G0145400 Rorug04G0145400 Rorug04G0145600.1 Rorug04G0145700.1 Rorug04G0148500 Rorug06G0217000
rosa_samantha Rh2BG232000 Rh4AG207900 Rh4BG205000 Rh4BG205100 Rh4CG218700 Rh4DG134800 Rh4DG204800 Rh4DG204900 Rh4DG205000 Rh4DG205100 Rh4DG205200 Rh4DG205300 Rh4DG205400 Rh4DG205500 Rh5BG434500 Rh5CG457700 Rh6AG326800 Rh6BG334300 Rh6CG340500 Rh6DG327800
rosa_wichuraiana Rw1G015270 Rw4G017570 Rw4G017580 Rw4G017590 Rw4G017600 Rw4G017610 Rw4G017620 Rw4G017630 Rw4G017640 Rw6G028420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 33
AccBSI CCGCTC 3 cut(s) 12, 275, 971
AccII CGCG 3 cut(s) 141, 192, 380
AclWI GGATC 6 cut(s) 99, 107, 116, 661, 1810, 2059
AcoI YGGCCR 1 cut(s) 105
AcsI RAATTY 4 cut(s) 1208, 1226, 1241, 1665
AcuI CTGAAG 3 cut(s) 59, 683, 1499
AcyI GRCGYC 3 cut(s) 28, 183, 305
AfaI GTAC 4 cut(s) 639, 735, 975, 1995
AfiI CCNNNNNNNGG 3 cut(s) 151, 320, 2105
AjiI CACGTC 1 cut(s) 148
AjnI CCWGG 3 cut(s) 729, 1402, 2103
AjuI GAANNNNNNNTTGG 2 cut(s) 111, 143
AluBI AGCT 8 cut(s) 49, 524, 650, 902, 1073, 1199, 1447, 1847
AluI AGCT 8 cut(s) 49, 524, 650, 902, 1073, 1199, 1447, 1847
Alw21I GWGCWC 1 cut(s) 354
Alw26I GTCTC 1 cut(s) 1932
AlwI GGATC 6 cut(s) 99, 107, 116, 661, 1810, 2059
Ama87I CYCGRG 1 cut(s) 213
AoxI GGCC 4 cut(s) 105, 657, 1503, 1950
ApaI GGGCCC 1 cut(s) 661
ApoI RAATTY 4 cut(s) 1208, 1226, 1241, 1665
AseI ATTAAT 1 cut(s) 983
Asp700I GAANNNNTTC 1 cut(s) 1692
AspLEI GCGC 3 cut(s) 143, 194, 382
AspS9I GGNCC 3 cut(s) 4, 657, 658
AsuHPI GGTGA 5 cut(s) 10, 867, 993, 1418, 1601
AsuII TTCGAA 1 cut(s) 1124
AvaI CYCGRG 1 cut(s) 213
AvaII GGWCC 1 cut(s) 4
BaeGI GKGCMC 1 cut(s) 661
BanII GRGCYC 2 cut(s) 220, 661
BauI CACGAG 1 cut(s) 353
Bbv12I GWGCWC 1 cut(s) 354
BccI CCATC 5 cut(s) 500, 1229, 1487, 1703, 1755
BceAI ACGGC 3 cut(s) 92, 380, 945
BciT130I CCWGG 3 cut(s) 731, 1404, 2105
BciVI GTATCC 2 cut(s) 605, 1709
BclI TGATCA 1 cut(s) 1852
BcoDI GTCTC 1 cut(s) 1932
BfaI CTAG 2 cut(s) 671, 1997
BfmI CTRYAG 1 cut(s) 651
BfuI GTATCC 2 cut(s) 605, 1709
Bme1390I CCNGG 3 cut(s) 731, 1404, 2105
Bme18I GGWCC 1 cut(s) 4
BmeT110I CYCGRG 1 cut(s) 213
BmgBI CACGTC 1 cut(s) 148
BmgT120I GGNCC 3 cut(s) 4, 657, 658
BmiI GGNNCC 3 cut(s) 279, 658, 659
BmrFI CCNGG 3 cut(s) 731, 1404, 2105
BmsI GCATC 9 cut(s) 304, 418, 520, 825, 981, 1329, 1540, 1720, 1962
BpmI CTGGAG 3 cut(s) 453, 980, 1545
Bpu10I CCTNAGC 1 cut(s) 1902
Bpu14I TTCGAA 1 cut(s) 1124
BpuEI CTTGAG 3 cut(s) 152, 1094, 1484
BsaBI GATNNNNATC 1 cut(s) 1857
BsaHI GRCGYC 3 cut(s) 28, 183, 305
BsaJI CCNNGG 4 cut(s) 201, 1734, 2027, 2104
BsaWI WCCGGW 1 cut(s) 2059
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 3 cut(s) 151, 320, 2105
Bse1I ACTGG 1 cut(s) 997
Bse3DI GCAATG 4 cut(s) 721, 1077, 1191, 1896
Bse8I GATNNNNATC 1 cut(s) 1857
BseBI CCWGG 3 cut(s) 731, 1404, 2105
BseDI CCNNGG 4 cut(s) 201, 1734, 2027, 2104
BseGI GGATG 3 cut(s) 535, 1744, 2035
BseJI GATNNNNATC 1 cut(s) 1857
BseLI CCNNNNNNNGG 3 cut(s) 151, 320, 2105
BseMI GCAATG 4 cut(s) 721, 1077, 1191, 1896
BseMII CTCAG 3 cut(s) 741, 860, 1916
BseNI ACTGG 1 cut(s) 997
BseRI GAGGAG 2 cut(s) 591, 1829
BseSI GKGCMC 1 cut(s) 661
BseX3I CGGCCG 1 cut(s) 105
Bsh1236I CGCG 3 cut(s) 141, 192, 380
Bsh1285I CGRYCG 2 cut(s) 108, 190
BshFI GGCC 4 cut(s) 107, 659, 1505, 1952
BsiEI CGRYCG 2 cut(s) 108, 190
BsiHKAI GWGCWC 1 cut(s) 354
BsiHKCI CYCGRG 1 cut(s) 213
BsiSI CCGG 6 cut(s) 89, 104, 281, 314, 404, 2060
BslFI GGGAC 1 cut(s) 1778
BslI CCNNNNNNNGG 3 cut(s) 151, 320, 2105
BsmAI GTCTC 1 cut(s) 1932
BsmFI GGGAC 1 cut(s) 1778
BsmI GAATGC 3 cut(s) 272, 674, 1983
BsnI GGCC 4 cut(s) 107, 659, 1505, 1952
BsoBI CYCGRG 1 cut(s) 213
Bsp119I TTCGAA 1 cut(s) 1124
Bsp120I GGGCCC 1 cut(s) 657
Bsp1286I GDGCHC 3 cut(s) 220, 354, 661
Bsp19I CCATGG 1 cut(s) 2027
BspANI GGCC 4 cut(s) 107, 659, 1505, 1952
BspCNI CTCAG 3 cut(s) 742, 861, 1915
BspFNI CGCG 3 cut(s) 141, 192, 380
BspHI TCATGA 1 cut(s) 550
BspLI GGNNCC 3 cut(s) 279, 658, 659
BspMAI CTGCAG 1 cut(s) 655
BspPI GGATC 6 cut(s) 99, 107, 116, 661, 1810, 2059
BspT104I TTCGAA 1 cut(s) 1124
BsrBI CCGCTC 3 cut(s) 12, 275, 971
BsrDI GCAATG 4 cut(s) 721, 1077, 1191, 1896
BsrI ACTGG 1 cut(s) 997
BssECI CCNNGG 4 cut(s) 201, 1734, 2027, 2104
BssNI GRCGYC 3 cut(s) 28, 183, 305
BssSI CACGAG 1 cut(s) 353
BssT1I CCWWGG 3 cut(s) 201, 1734, 2027
Bst2BI CACGAG 1 cut(s) 353
Bst2UI CCWGG 3 cut(s) 731, 1404, 2105
Bst4CI ACNGT 3 cut(s) 335, 1643, 1650
Bst6I CTCTTC 1 cut(s) 811
BstACI GRCGYC 3 cut(s) 28, 183, 305
BstBI TTCGAA 1 cut(s) 1124
BstC8I GCNNGC 4 cut(s) 1075, 1677, 1977, 1981
BstDEI CTNAG 6 cut(s) 259, 750, 869, 1260, 1633, 1902
BstDSI CCRYGG 1 cut(s) 2027
BstF5I GGATG 3 cut(s) 535, 1744, 2035
BstFNI CGCG 3 cut(s) 141, 192, 380
BstHHI GCGC 3 cut(s) 143, 194, 382
BstMAI GTCTC 1 cut(s) 1932
BstMCI CGRYCG 2 cut(s) 108, 190
BstNI CCWGG 3 cut(s) 731, 1404, 2105
BstNSI RCATGY 2 cut(s) 1895, 1983
BstSCI CCNGG 3 cut(s) 729, 1402, 2103
BstSFI CTRYAG 1 cut(s) 651
BstSLI GKGCMC 1 cut(s) 661
BstUI CGCG 3 cut(s) 141, 192, 380
BstX2I RGATCY 3 cut(s) 121, 666, 2064
BstYI RGATCY 3 cut(s) 121, 666, 2064
BstZI CGGCCG 1 cut(s) 105
BsuI GTATCC 2 cut(s) 605, 1709
BsuRI GGCC 4 cut(s) 107, 659, 1505, 1952
BtgI CCRYGG 1 cut(s) 2027
BtgZI GCGATG 1 cut(s) 376
BtrI CACGTC 1 cut(s) 148
BtsCI GGATG 3 cut(s) 535, 1744, 2035
Cac8I GCNNGC 4 cut(s) 1075, 1677, 1977, 1981
CciI TCATGA 1 cut(s) 550
CfoI GCGC 3 cut(s) 143, 194, 382
Cfr13I GGNCC 3 cut(s) 4, 657, 658
CseI GACGC 4 cut(s) 36, 191, 313, 1868
CsiI ACCWGGT 1 cut(s) 729
Csp6I GTAC 4 cut(s) 638, 734, 974, 1994
CviAII CATG 9 cut(s) 551, 1490, 1544, 1702, 1892, 1933, 1963, 1980, 2028
CviQI GTAC 4 cut(s) 638, 734, 974, 1994
DdeI CTNAG 6 cut(s) 259, 750, 869, 1260, 1633, 1902
DrdI GACNNNNNNGTC 1 cut(s) 33
DseDI GACNNNNNNGTC 1 cut(s) 33
EaeI YGGCCR 1 cut(s) 105
EagI CGGCCG 1 cut(s) 105
Eam1104I CTCTTC 1 cut(s) 811
EarI CTCTTC 1 cut(s) 811
EciI GGCGGA 2 cut(s) 163, 339
EclXI CGGCCG 1 cut(s) 105
Eco130I CCWWGG 3 cut(s) 201, 1734, 2027
Eco147I AGGCCT 1 cut(s) 1952
Eco24I GRGCYC 2 cut(s) 220, 661
Eco32I GATATC 1 cut(s) 1909
Eco47I GGWCC 1 cut(s) 4
Eco52I CGGCCG 1 cut(s) 105
Eco57I CTGAAG 3 cut(s) 59, 683, 1499
Eco88I CYCGRG 1 cut(s) 213
EcoO109I RGGNCCY 2 cut(s) 657, 658
EcoRI GAATTC 1 cut(s) 1241
EcoRII CCWGG 3 cut(s) 729, 1402, 2103
EcoRV GATATC 1 cut(s) 1909
EcoT14I CCWWGG 3 cut(s) 201, 1734, 2027
EcoT22I ATGCAT 1 cut(s) 1985
EcoT38I GRGCYC 2 cut(s) 220, 661
ErhI CCWWGG 3 cut(s) 201, 1734, 2027
FaeI CATG 9 cut(s) 554, 1493, 1547, 1705, 1895, 1936, 1966, 1983, 2031
FalI AAGNNNNNCTT 2 cut(s) 111, 143
FaqI GGGAC 1 cut(s) 1778
FatI CATG 9 cut(s) 550, 1489, 1543, 1701, 1891, 1932, 1962, 1979, 2027
FauI CCCGC 2 cut(s) 487, 1335
FbaI TGATCA 1 cut(s) 1852
FokI GGATG 3 cut(s) 542, 1751, 2022
FriOI GRGCYC 2 cut(s) 220, 661
FspBI CTAG 2 cut(s) 671, 1997
GlaI GCGC 3 cut(s) 142, 193, 381
GsuI CTGGAG 3 cut(s) 453, 980, 1545
HaeIII GGCC 4 cut(s) 107, 659, 1505, 1952
HapII CCGG 6 cut(s) 89, 104, 281, 314, 404, 2060
HgaI GACGC 4 cut(s) 36, 191, 313, 1868
HhaI GCGC 3 cut(s) 143, 194, 382
Hin1I GRCGYC 3 cut(s) 28, 183, 305
Hin1II CATG 9 cut(s) 554, 1493, 1547, 1705, 1895, 1936, 1966, 1983, 2031
Hin6I GCGC 3 cut(s) 141, 192, 380
HinP1I GCGC 3 cut(s) 141, 192, 380
HincII GTYRAC 1 cut(s) 1639
HindII GTYRAC 1 cut(s) 1639
HpaII CCGG 6 cut(s) 89, 104, 281, 314, 404, 2060
HphI GGTGA 5 cut(s) 10, 867, 993, 1418, 1601
Hpy166II GTNNAC 6 cut(s) 802, 875, 1603, 1639, 1646, 1889
Hpy8I GTNNAC 6 cut(s) 802, 875, 1603, 1639, 1646, 1889
Hpy99I CGWCG 4 cut(s) 113, 185, 227, 2119
HpyAV CCTTC 3 cut(s) 178, 581, 1862
HpyCH4III ACNGT 3 cut(s) 335, 1643, 1650
HpyCH4IV ACGT 2 cut(s) 147, 1767
HpyF3I CTNAG 6 cut(s) 259, 750, 869, 1260, 1633, 1902
HpySE526I ACGT 2 cut(s) 147, 1767
Hsp92I GRCGYC 3 cut(s) 28, 183, 305
Hsp92II CATG 9 cut(s) 554, 1493, 1547, 1705, 1895, 1936, 1966, 1983, 2031
HspAI GCGC 3 cut(s) 141, 192, 380
Ksp22I TGATCA 1 cut(s) 1852
LmnI GCTCC 5 cut(s) 17, 272, 968, 999, 1444
LweI GCATC 9 cut(s) 304, 418, 520, 825, 981, 1329, 1540, 1720, 1962
MabI ACCWGGT 1 cut(s) 729
MaeI CTAG 2 cut(s) 671, 1997
MaeII ACGT 2 cut(s) 147, 1767
MaeIII GTNAC 4 cut(s) 16, 539, 999, 1113
MbiI CCGCTC 3 cut(s) 12, 275, 971
MboII GAAGA 5 cut(s) 80, 676, 798, 1312, 1674
MfeI CAATTG 1 cut(s) 1038
MflI RGATCY 3 cut(s) 121, 666, 2064
MhlI GDGCHC 3 cut(s) 220, 354, 661
MluCI AATT 8 cut(s) 786, 984, 1038, 1208, 1215, 1226, 1241, 1665
MlyI GAGTC 2 cut(s) 155, 1475
MmeI TCCRAC 1 cut(s) 204
Mph1103I ATGCAT 1 cut(s) 1985
MroXI GAANNNNTTC 1 cut(s) 1692
MseI TTAA 9 cut(s) 291, 384, 399, 461, 567, 618, 983, 987, 1206
MslI CAYNNNNRTG 2 cut(s) 1089, 1548
MspA1I CMGCKG 1 cut(s) 650
MspI CCGG 6 cut(s) 89, 104, 281, 314, 404, 2060
MspR9I CCNGG 3 cut(s) 731, 1404, 2105
MunI CAATTG 1 cut(s) 1038
Mva1269I GAATGC 3 cut(s) 272, 674, 1983
MvaI CCWGG 3 cut(s) 731, 1404, 2105
MvnI CGCG 3 cut(s) 141, 192, 380
NcoI CCATGG 1 cut(s) 2027
NlaIII CATG 9 cut(s) 554, 1493, 1547, 1705, 1895, 1936, 1966, 1983, 2031
NlaIV GGNNCC 3 cut(s) 279, 658, 659
NmuCI GTSAC 2 cut(s) 16, 999
NsiI ATGCAT 1 cut(s) 1985
NspI RCATGY 2 cut(s) 1895, 1983
NspV TTCGAA 1 cut(s) 1124
PacI TTAATTAA 1 cut(s) 987
PaeI GCATGC 1 cut(s) 1983
PagI TCATGA 1 cut(s) 550
PceI AGGCCT 1 cut(s) 1952
PcsI WCGNNNNNNNCGW 1 cut(s) 237
PctI GAATGC 3 cut(s) 272, 674, 1983
PdmI GAANNNNTTC 1 cut(s) 1692
PleI GAGTC 2 cut(s) 155, 1474
PpsI GAGTC 2 cut(s) 155, 1474
PshBI ATTAAT 1 cut(s) 983
Psp6I CCWGG 3 cut(s) 729, 1402, 2103
PspGI CCWGG 3 cut(s) 729, 1402, 2103
PspN4I GGNNCC 3 cut(s) 279, 658, 659
PspOMI GGGCCC 1 cut(s) 657
PspPI GGNCC 3 cut(s) 4, 657, 658
PsrI GAACNNNNNNTAC 2 cut(s) 1539, 1571
PstI CTGCAG 1 cut(s) 655
PsuI RGATCY 3 cut(s) 121, 666, 2064
PvuII CAGCTG 1 cut(s) 650
RsaI GTAC 4 cut(s) 639, 735, 975, 1995
RsaNI GTAC 4 cut(s) 638, 734, 974, 1994
RseI CAYNNNNRTG 2 cut(s) 1089, 1548
SaqAI TTAA 9 cut(s) 291, 384, 399, 461, 567, 618, 983, 987, 1206
Sau96I GGNCC 3 cut(s) 4, 657, 658
SchI GAGTC 2 cut(s) 155, 1475
ScrFI CCNGG 3 cut(s) 731, 1404, 2105
SduI GDGCHC 3 cut(s) 220, 354, 661
SexAI ACCWGGT 1 cut(s) 729
SfaNI GCATC 9 cut(s) 304, 418, 520, 825, 981, 1329, 1540, 1720, 1962
SfcI CTRYAG 1 cut(s) 651
SfuI TTCGAA 1 cut(s) 1124
SinI GGWCC 1 cut(s) 4
SmiMI CAYNNNNRTG 2 cut(s) 1089, 1548
SmlI CTYRAG 3 cut(s) 131, 1109, 1463
SmoI CTYRAG 3 cut(s) 131, 1109, 1463
SphI GCATGC 1 cut(s) 1983
Sse9I AATT 8 cut(s) 786, 984, 1038, 1208, 1215, 1226, 1241, 1665
SseBI AGGCCT 1 cut(s) 1952
SspI AATATT 1 cut(s) 1756
SspMI CTAG 2 cut(s) 671, 1997
StuI AGGCCT 1 cut(s) 1952
StyD4I CCNGG 3 cut(s) 729, 1402, 2103
StyI CCWWGG 3 cut(s) 201, 1734, 2027
TaaI ACNGT 3 cut(s) 335, 1643, 1650
TaiI ACGT 2 cut(s) 150, 1770
TaqI TCGA 9 cut(s) 111, 159, 225, 360, 1124, 1312, 1369, 1696, 1815
TasI AATT 8 cut(s) 786, 984, 1038, 1208, 1215, 1226, 1241, 1665
TatI WGTACW 1 cut(s) 1993
TauI GCSGC 7 cut(s) 12, 33, 197, 200, 212, 310, 313
Tru1I TTAA 9 cut(s) 291, 384, 399, 461, 567, 618, 983, 987, 1206
Tru9I TTAA 9 cut(s) 291, 384, 399, 461, 567, 618, 983, 987, 1206
TseFI GTSAC 2 cut(s) 16, 999
Tsp45I GTSAC 2 cut(s) 16, 999
TspDTI ATGAA 6 cut(s) 786, 1146, 1488, 1780, 2024, 2060
TspGWI ACGGA 3 cut(s) 4, 316, 333
VpaK11BI GGWCC 1 cut(s) 4
VspI ATTAAT 1 cut(s) 983
XapI RAATTY 4 cut(s) 1208, 1226, 1241, 1665
XceI RCATGY 2 cut(s) 1895, 1983
XcmI CCANNNNNNNNNTGG 1 cut(s) 1758
XmnI GAANNNNTTC 1 cut(s) 1692
XspI CTAG 2 cut(s) 671, 1997
Zsp2I ATGCAT 1 cut(s) 1985
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.