AT5G48930

shikimate

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
19836299 .. 19838235
1937 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G48930.1

Sequence Viewer

Length: 1302 bp
ATGAAAATTAACATCAGAGATTCCACCATGGTCCGGCCTGCCACCGAGACACCAATCACTAATCTTTGGAACTCCAACGTCGACCTTGTCATCCCCAGATTCCATACCCCTAGTGTCTACTTCTACAGACCCACCGGCGCTTCCAATTTCTTTGACCCTCAGGTCATGAAGGAAGCTCTTTCCAAAGCCCTTGTCCCTTTTTACCCTATGGCTGGTCGCTTGAAGAGAGACGATGATGGTCGTATTGAGATCGATTGTAACGGTGCTGGTGTTCTCTTCGTTGTGGCTGATACTCCTTCTGTTATCGATGATTTTGGTGATTTTGCTCCTACCCTTAATCTCCGTCAGCTTATTCCCGAAGTTGATCACTCCGCTGGCATTCACTCTTTCCCGCTTCTCGTTTTGCAGGTGACTTTCTTTAAATGTGGGGGAGCTTCACTTGGGGTTGGGATGCAACATCACGCGGCAGATGGTTTCTCTGGTCTTCATTTTATCAACACATGGTCTGATATGGCTCGTGGTCTTGACCTAACCATTCCACCTTTCATTGATCGAACACTCCTCCGAGCTAGGGACCCGCCACAGCCTGCTTTTCATCATGTTGAATATCAGCCTGCACCAAGTATGAAGATACCTCTTGATCCGTCTAAATCAGGACCTGAGAATACCACTGTCTCTATATTCAAATTAACACGAGACCAGCTTGTTGCTCTTAAGGCGAAATCCAAGGAGGATGGGAACACTGTCAGCTACAGCTCATACGAGATGTTGGCAGGGCATGTGTGGAGATCAGTGGGAAAGGCGCGAGGGCTTCCAAACGACCAAGAGACGAAACTGTACATTGCAACTGATGGAAGGTCTAGACTACGTCCGCAGCTGCCTCCTGGTTACTTTGGGAATGTGATATTCACTGCAACACCATTGGCTGTTGCAGGGGATTTGTTATCTAAGCCAACATGGTATGCTGCAGGACAGATTCATGATTTCTTGGTTCGTATGGATGATAACTATCTGAGGTCAGCTCTTGACTACCTGGAGATGCAGCCTGATCTGTCAGCCCTTGTCCGCGGTGCACATACCTACAAGTGCCCAAATTTGGGAATCACAAGCTGGGTTAGATTACCTATTTATGATGCAGACTTTGGTTGGGGTCGTCCTATCTTTATGGGACCTGGTGGAATTCCATACGAGGGTTTGTCTTTTGTGCTACCAAGTCCTACTAATGATGGCAGCTTATCCGTTGCCATTGCCCTCCAATCTGAACACATGAAACTGTTTGAGAAGTTTTTGTTTGAGATATGA

Protein Analysis

433

Amino Acids

47.97

Weight (kDa)

6.18

Isoelectric Point (pI)

32.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 1 - 428 1.1e-102 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000233)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48930
fragaria_vesca FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 397
AasI GACNNNNNNGTC 1 cut(s) 161
Acc36I ACCTGC 1 cut(s) 397
AccI GTMKAC 2 cut(s) 81, 117
AccII CGCG 3 cut(s) 464, 805, 1068
AciI CCGC 7 cut(s) 372, 392, 464, 578, 872, 1066, 1068
AclWI GGATC 1 cut(s) 635
AcsI RAATTY 2 cut(s) 1093, 1179
AfaI GTAC 1 cut(s) 839
AfiI CCNNNNNNNGG 6 cut(s) 33, 212, 571, 1096, 1097, 1190
AflII CTTAAG 1 cut(s) 713
AgsI TTSAA 3 cut(s) 223, 605, 685
AjnI CCWGG 3 cut(s) 883, 1032, 1171
Alw21I GWGCWC 1 cut(s) 1075
Alw26I GTCTC 5 cut(s) 41, 222, 679, 690, 821
Alw44I GTGCAC 1 cut(s) 1071
AlwI GGATC 1 cut(s) 635
AlwNI CAGNNNCTG 1 cut(s) 659
AoxI GGCC 1 cut(s) 35
ApaLI GTGCAC 1 cut(s) 1071
ApeKI GCWGC 5 cut(s) 874, 877, 965, 1042, 1230
ApoI RAATTY 2 cut(s) 1093, 1179
ArsI GACNNNNNNTTYG 2 cut(s) 177, 209
AspLEI GCGC 2 cut(s) 140, 805
AspS9I GGNCC 4 cut(s) 31, 574, 656, 1169
AsuHPI GGTGA 2 cut(s) 329, 421
AvaII GGWCC 4 cut(s) 31, 574, 656, 1169
AxyI CCTNAGG 1 cut(s) 159
BaeGI GKGCMC 2 cut(s) 1075, 1091
BauI CACGAG 2 cut(s) 516, 693
BbsI GAAGAC 1 cut(s) 476
Bbv12I GWGCWC 1 cut(s) 1075
BbvI GCAGC 5 cut(s) 864, 886, 952, 1054, 1242
BccI CCATC 5 cut(s) 230, 464, 728, 845, 1220
BciT130I CCWGG 3 cut(s) 885, 1034, 1173
BclI TGATCA 1 cut(s) 364
BcoDI GTCTC 5 cut(s) 41, 222, 679, 690, 821
BfaI CTAG 3 cut(s) 111, 570, 861
BfmI CTRYAG 3 cut(s) 124, 751, 966
BfoI RGCGCY 1 cut(s) 141
BfrI CTTAAG 1 cut(s) 713
BfuAI ACCTGC 1 cut(s) 397
BisI GCNGC 6 cut(s) 465, 875, 878, 966, 1043, 1231
BlsI GCNGC 6 cut(s) 466, 876, 879, 967, 1044, 1232
Bme1390I CCNGG 3 cut(s) 885, 1034, 1173
Bme18I GGWCC 4 cut(s) 31, 574, 656, 1169
BmgT120I GGNCC 4 cut(s) 31, 574, 656, 1169
BmiI GGNNCC 3 cut(s) 575, 576, 1170
BmrFI CCNGG 3 cut(s) 885, 1034, 1173
BmsI GCATC 3 cut(s) 441, 1029, 1123
BpiI GAAGAC 1 cut(s) 476
BplI GAGNNNNNCTC 2 cut(s) 1006, 1038
BpmI CTGGAG 1 cut(s) 1055
Bsa29I ATCGAT 2 cut(s) 252, 306
BsaBI GATNNNNATC 1 cut(s) 1008
BsaI GGTCTC 1 cut(s) 690
BsaJI CCNNGG 3 cut(s) 27, 726, 1066
Bsc4I CCNNNNNNNGG 6 cut(s) 33, 212, 571, 1096, 1097, 1190
Bse118I RCCGGY 1 cut(s) 134
Bse21I CCTNAGG 1 cut(s) 159
Bse3DI GCAATG 2 cut(s) 840, 1245
Bse8I GATNNNNATC 1 cut(s) 1008
BseBI CCWGG 3 cut(s) 885, 1034, 1173
BseCI ATCGAT 2 cut(s) 252, 306
BseDI CCNNGG 3 cut(s) 27, 726, 1066
BseGI GGATG 4 cut(s) 90, 456, 739, 1006
BseJI GATNNNNATC 1 cut(s) 1008
BseLI CCNNNNNNNGG 6 cut(s) 33, 212, 571, 1096, 1097, 1190
BseMI GCAATG 2 cut(s) 840, 1245
BseMII CTCAG 3 cut(s) 173, 651, 1004
BseRI GAGGAG 1 cut(s) 551
BseSI GKGCMC 2 cut(s) 1075, 1091
BseXI GCAGC 5 cut(s) 864, 886, 952, 1054, 1242
BseYI CCCAGC 1 cut(s) 1110
BsgI GTGCAG 1 cut(s) 600
Bsh1236I CGCG 3 cut(s) 464, 805, 1068
BshFI GGCC 1 cut(s) 37
BshVI ATCGAT 2 cut(s) 252, 306
BsiHKAI GWGCWC 1 cut(s) 1075
BsiSI CCGG 2 cut(s) 34, 135
BslFI GGGAC 3 cut(s) 179, 587, 1182
BslI CCNNNNNNNGG 6 cut(s) 33, 212, 571, 1096, 1097, 1190
BsmAI GTCTC 5 cut(s) 41, 222, 679, 690, 821
BsmBI CGTCTC 2 cut(s) 222, 821
BsmFI GGGAC 3 cut(s) 179, 587, 1182
BsmI GAATGC 1 cut(s) 378
BsnI GGCC 1 cut(s) 37
Bso31I GGTCTC 1 cut(s) 690
Bsp1286I GDGCHC 2 cut(s) 1075, 1091
Bsp1407I TGTACA 1 cut(s) 837
Bsp143I GATC 6 cut(s) 249, 364, 550, 640, 788, 1048
Bsp19I CCATGG 1 cut(s) 27
BspACI CCGC 7 cut(s) 372, 392, 464, 578, 872, 1066, 1068
BspANI GGCC 1 cut(s) 37
BspCNI CTCAG 3 cut(s) 172, 652, 1005
BspDI ATCGAT 2 cut(s) 252, 306
BspFNI CGCG 3 cut(s) 464, 805, 1068
BspHI TCATGA 2 cut(s) 165, 979
BspLI GGNNCC 3 cut(s) 575, 576, 1170
BspMAI CTGCAG 1 cut(s) 970
BspMI ACCTGC 1 cut(s) 397
BspPI GGATC 1 cut(s) 635
BspTI CTTAAG 1 cut(s) 713
BspTNI GGTCTC 1 cut(s) 690
BsrDI GCAATG 2 cut(s) 840, 1245
BsrFI RCCGGY 1 cut(s) 134
BsrGI TGTACA 1 cut(s) 837
BssAI RCCGGY 1 cut(s) 134
BssECI CCNNGG 3 cut(s) 27, 726, 1066
BssMI GATC 6 cut(s) 249, 364, 550, 640, 788, 1048
BssSI CACGAG 2 cut(s) 516, 693
BssT1I CCWWGG 2 cut(s) 27, 726
Bst2BI CACGAG 2 cut(s) 516, 693
Bst2UI CCWGG 3 cut(s) 885, 1034, 1173
Bst4CI ACNGT 5 cut(s) 263, 673, 745, 837, 1275
Bst6I CTCTTC 2 cut(s) 218, 281
BstAFI CTTAAG 1 cut(s) 713
BstAUI TGTACA 1 cut(s) 837
BstC8I GCNNGC 4 cut(s) 39, 376, 588, 615
BstDEI CTNAG 4 cut(s) 159, 660, 948, 1013
BstDSI CCRYGG 2 cut(s) 27, 1066
BstF5I GGATG 4 cut(s) 90, 456, 739, 1006
BstFNI CGCG 3 cut(s) 464, 805, 1068
BstH2I RGCGCY 1 cut(s) 141
BstHHI GCGC 2 cut(s) 140, 805
BstKTI GATC 6 cut(s) 252, 367, 553, 643, 791, 1051
BstMAI GTCTC 5 cut(s) 41, 222, 679, 690, 821
BstMBI GATC 6 cut(s) 249, 364, 550, 640, 788, 1048
BstMWI GCNNNNNNNGC 1 cut(s) 716
BstNI CCWGG 3 cut(s) 885, 1034, 1173
BstNSI RCATGY 1 cut(s) 782
BstSCI CCNGG 3 cut(s) 883, 1032, 1171
BstSFI CTRYAG 3 cut(s) 124, 751, 966
BstSLI GKGCMC 2 cut(s) 1075, 1091
BstUI CGCG 3 cut(s) 464, 805, 1068
BstV1I GCAGC 5 cut(s) 864, 886, 952, 1054, 1242
BstV2I GAAGAC 1 cut(s) 476
Bsu15I ATCGAT 2 cut(s) 252, 306
Bsu36I CCTNAGG 1 cut(s) 159
BsuRI GGCC 1 cut(s) 37
BsuTUI ATCGAT 2 cut(s) 252, 306
BtgI CCRYGG 2 cut(s) 27, 1066
BtsCI GGATG 4 cut(s) 90, 456, 739, 1006
BtsI GCAGTG 1 cut(s) 909
BtsIMutI CAGTG 4 cut(s) 669, 741, 798, 909
BveI ACCTGC 1 cut(s) 397
Cac8I GCNNGC 4 cut(s) 39, 376, 588, 615
CaiI CAGNNNCTG 1 cut(s) 659
CciI TCATGA 2 cut(s) 165, 979
CfoI GCGC 2 cut(s) 140, 805
Cfr10I RCCGGY 1 cut(s) 134
Cfr13I GGNCC 4 cut(s) 31, 574, 656, 1169
Cfr42I CCGCGG 1 cut(s) 1069
ClaI ATCGAT 2 cut(s) 252, 306
CsiI ACCWGGT 1 cut(s) 1171
Csp6I GTAC 1 cut(s) 838
CviAII CATG 8 cut(s) 28, 166, 501, 599, 779, 957, 980, 1267
CviQI GTAC 1 cut(s) 838
DdeI CTNAG 4 cut(s) 159, 660, 948, 1013
DpnI GATC 6 cut(s) 251, 366, 552, 642, 790, 1050
DpnII GATC 6 cut(s) 249, 364, 550, 640, 788, 1048
DraI TTTAAA 1 cut(s) 421
DrdI GACNNNNNNGTC 1 cut(s) 161
DseDI GACNNNNNNGTC 1 cut(s) 161
Eam1104I CTCTTC 2 cut(s) 218, 281
EarI CTCTTC 2 cut(s) 218, 281
Eco130I CCWWGG 2 cut(s) 27, 726
Eco31I GGTCTC 1 cut(s) 690
Eco47I GGWCC 4 cut(s) 31, 574, 656, 1169
Eco81I CCTNAGG 1 cut(s) 159
EcoO109I RGGNCCY 3 cut(s) 574, 656, 1169
EcoRI GAATTC 1 cut(s) 1179
EcoRII CCWGG 3 cut(s) 883, 1032, 1171
EcoT14I CCWWGG 2 cut(s) 27, 726
ErhI CCWWGG 2 cut(s) 27, 726
Esp3I CGTCTC 2 cut(s) 222, 821
FaeI CATG 8 cut(s) 31, 169, 504, 602, 782, 960, 983, 1270
FaqI GGGAC 3 cut(s) 179, 587, 1182
FatI CATG 8 cut(s) 27, 165, 500, 598, 778, 956, 979, 1266
FauI CCCGC 2 cut(s) 399, 585
FbaI TGATCA 1 cut(s) 364
FblI GTMKAC 2 cut(s) 81, 117
Fnu4HI GCNGC 6 cut(s) 465, 875, 878, 966, 1043, 1231
FokI GGATG 4 cut(s) 77, 463, 746, 1013
Fsp4HI GCNGC 6 cut(s) 465, 875, 878, 966, 1043, 1231
FspBI CTAG 3 cut(s) 111, 570, 861
GlaI GCGC 2 cut(s) 139, 804
GluI GCNGC 6 cut(s) 465, 875, 878, 966, 1043, 1231
GsaI CCCAGC 1 cut(s) 1114
GsuI CTGGAG 1 cut(s) 1055
HaeII RGCGCY 1 cut(s) 141
HaeIII GGCC 1 cut(s) 37
HapII CCGG 2 cut(s) 34, 135
HhaI GCGC 2 cut(s) 140, 805
Hin1II CATG 8 cut(s) 31, 169, 504, 602, 782, 960, 983, 1270
Hin6I GCGC 2 cut(s) 138, 803
HinP1I GCGC 2 cut(s) 138, 803
HincII GTYRAC 1 cut(s) 82
HindII GTYRAC 1 cut(s) 82
HinfI GANTC 4 cut(s) 20, 99, 976, 1101
HpaII CCGG 2 cut(s) 34, 135
HphI GGTGA 2 cut(s) 329, 421
Hpy166II GTNNAC 3 cut(s) 82, 118, 1073
Hpy188I TCNGA 5 cut(s) 17, 508, 566, 1014, 1261
Hpy188III TCNNGA 8 cut(s) 166, 356, 524, 638, 654, 861, 980, 1025
Hpy8I GTNNAC 3 cut(s) 82, 118, 1073
Hpy99I CGWCG 1 cut(s) 83
HpyAV CCTTC 3 cut(s) 163, 306, 849
HpyCH4III ACNGT 5 cut(s) 263, 673, 745, 837, 1275
HpyCH4IV ACGT 2 cut(s) 78, 868
HpyF10VI GCNNNNNNNGC 1 cut(s) 716
HpyF3I CTNAG 4 cut(s) 159, 660, 948, 1013
HpySE526I ACGT 2 cut(s) 78, 868
Hsp92II CATG 8 cut(s) 31, 169, 504, 602, 782, 960, 983, 1270
HspAI GCGC 2 cut(s) 138, 803
KflI GGGWCCC 1 cut(s) 574
Ksp22I TGATCA 1 cut(s) 364
KspI CCGCGG 1 cut(s) 1069
Kzo9I GATC 6 cut(s) 249, 364, 550, 640, 788, 1048
LmnI GCTCC 2 cut(s) 331, 431
Lsp1109I GCAGC 5 cut(s) 864, 886, 952, 1054, 1242
LweI GCATC 3 cut(s) 441, 1029, 1123
MabI ACCWGGT 1 cut(s) 1171
MaeI CTAG 3 cut(s) 111, 570, 861
MaeII ACGT 2 cut(s) 78, 868
MaeIII GTNAC 3 cut(s) 257, 409, 887
MalI GATC 6 cut(s) 251, 366, 552, 642, 790, 1050
MboI GATC 6 cut(s) 249, 364, 550, 640, 788, 1048
MboII GAAGA 4 cut(s) 235, 268, 476, 640
MhlI GDGCHC 2 cut(s) 1075, 1091
MluCI AATT 5 cut(s) 6, 145, 686, 1093, 1179
MmeI TCCRAC 1 cut(s) 99
MnlI CCTC 9 cut(s) 168, 572, 645, 724, 800, 891, 1008, 1183, 1262
MseI TTAA 5 cut(s) 9, 336, 420, 689, 714
MspA1I CMGCKG 3 cut(s) 374, 877, 1068
MspCI CTTAAG 1 cut(s) 713
MspI CCGG 2 cut(s) 34, 135
MspR9I CCNGG 3 cut(s) 885, 1034, 1173
Mva1269I GAATGC 1 cut(s) 378
MvaI CCWGG 3 cut(s) 885, 1034, 1173
MvnI CGCG 3 cut(s) 464, 805, 1068
MwoI GCNNNNNNNGC 1 cut(s) 716
NcoI CCATGG 1 cut(s) 27
NdeII GATC 6 cut(s) 249, 364, 550, 640, 788, 1048
NlaIII CATG 8 cut(s) 31, 169, 504, 602, 782, 960, 983, 1270
NlaIV GGNNCC 3 cut(s) 575, 576, 1170
NmuCI GTSAC 1 cut(s) 409
NspI RCATGY 1 cut(s) 782
PagI TCATGA 2 cut(s) 165, 979
PaqCI CACCTGC 1 cut(s) 397
PctI GAATGC 1 cut(s) 378
PfeI GAWTC 4 cut(s) 20, 99, 976, 1101
PflFI GACNNNGTC 2 cut(s) 86, 867
PkrI GCNGC 6 cut(s) 466, 876, 879, 967, 1044, 1232
PpuMI RGGWCCY 3 cut(s) 574, 656, 1169
Psp5II RGGWCCY 3 cut(s) 574, 656, 1169
Psp6I CCWGG 3 cut(s) 883, 1032, 1171
PspFI CCCAGC 1 cut(s) 1110
PspGI CCWGG 3 cut(s) 883, 1032, 1171
PspN4I GGNNCC 3 cut(s) 575, 576, 1170
PspPI GGNCC 4 cut(s) 31, 574, 656, 1169
PspPPI RGGWCCY 3 cut(s) 574, 656, 1169
PstI CTGCAG 1 cut(s) 970
PstNI CAGNNNCTG 1 cut(s) 659
PsyI GACNNNGTC 2 cut(s) 86, 867
PvuII CAGCTG 1 cut(s) 877
RsaI GTAC 1 cut(s) 839
RsaNI GTAC 1 cut(s) 838
SacII CCGCGG 1 cut(s) 1069
SalI GTCGAC 1 cut(s) 80
SaqAI TTAA 5 cut(s) 9, 336, 420, 689, 714
SatI GCNGC 6 cut(s) 465, 875, 878, 966, 1043, 1231
Sau3AI GATC 6 cut(s) 249, 364, 550, 640, 788, 1048
Sau96I GGNCC 4 cut(s) 31, 574, 656, 1169
ScrFI CCNGG 3 cut(s) 885, 1034, 1173
SduI GDGCHC 2 cut(s) 1075, 1091
SexAI ACCWGGT 1 cut(s) 1171
SfaNI GCATC 3 cut(s) 441, 1029, 1123
SfcI CTRYAG 3 cut(s) 124, 751, 966
Sfr303I CCGCGG 1 cut(s) 1069
SgrAI CRCCGGYG 1 cut(s) 134
SgrBI CCGCGG 1 cut(s) 1069
SinI GGWCC 4 cut(s) 31, 574, 656, 1169
SmlI CTYRAG 1 cut(s) 713
SmoI CTYRAG 1 cut(s) 713
Sse9I AATT 5 cut(s) 6, 145, 686, 1093, 1179
SsiI CCGC 7 cut(s) 372, 392, 464, 578, 872, 1066, 1068
SspMI CTAG 3 cut(s) 111, 570, 861
StyD4I CCNGG 3 cut(s) 883, 1032, 1171
StyI CCWWGG 2 cut(s) 27, 726
TaaI ACNGT 5 cut(s) 263, 673, 745, 837, 1275
TaiI ACGT 2 cut(s) 81, 871
TaqI TCGA 4 cut(s) 81, 252, 306, 553
TasI AATT 5 cut(s) 6, 145, 686, 1093, 1179
TatI WGTACW 1 cut(s) 837
TauI GCSGC 1 cut(s) 467
TfiI GAWTC 4 cut(s) 20, 99, 976, 1101
Tru1I TTAA 5 cut(s) 9, 336, 420, 689, 714
Tru9I TTAA 5 cut(s) 9, 336, 420, 689, 714
TscAI CASTG 4 cut(s) 676, 748, 798, 916
TseFI GTSAC 1 cut(s) 409
TseI GCWGC 5 cut(s) 874, 877, 965, 1042, 1230
Tsp45I GTSAC 1 cut(s) 409
TspDTI ATGAA 8 cut(s) 17, 182, 476, 535, 584, 641, 968, 1283
TspGWI ACGGA 3 cut(s) 332, 633, 1228
TspRI CASTG 4 cut(s) 676, 748, 798, 916
Tth111I GACNNNGTC 2 cut(s) 86, 867
Vha464I CTTAAG 1 cut(s) 713
VneI GTGCAC 1 cut(s) 1071
VpaK11BI GGWCC 4 cut(s) 31, 574, 656, 1169
XapI RAATTY 2 cut(s) 1093, 1179
XbaI TCTAGA 1 cut(s) 860
XceI RCATGY 1 cut(s) 782
XmiI GTMKAC 2 cut(s) 81, 117
XspI CTAG 3 cut(s) 111, 570, 861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.