Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Forward (+)

7746825 .. 7751055

Gene Structure 4231 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G101000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1323 bp

ATGGCGGTGGTCAACGTGAGCGTGAGGGAGTCAACGTTGGTGAAGCCGGCGGAGGAGACGCCGAGGCAGGTGCTGTGGATGACCAACTTGGACCTTGTGATTTTGGGCAACCACACGCCAAGCGTCTACTTCTACAGGCAGAACCAAAACAGTGTGCACGGTCATCATAACAACTTCTTCGACCCGCAGGTGCTCAAGCAGGCGCTAAGCAAGGCCCTCGTGCCCTTCTACCCGTTGGCGGGGCGCCTCGGGATGGAAGGCAACGGCCGCGGCGAGATCGACTGCAATTCGGAGGGCGCGCTGTTTGTCGTGGCTGAGACGGGCTCAACCATCGACGATTTCGGCGACTTCGCGCCGACTCTCGAGTTCCGGAAGCTCATCCCAGCCGTTGATTATTCGACAGGGATATCAACTTATCCCCTCTTGGTGTTGCAGGTCACATACTTCAAATGTGGTGGAGTGTCACTTGGTGTTGGCCTGGAACATCGTGTAGCAGATGGCCTTTCTGGTCTCCACTTTGTAAATACATGGTCTGATATTGCTCGAGGTCTTGACCTGACAATTCCACCATTCATTGACAGGACATTACTTCGTGCCCGATACCCACCACAGCCTGCATTCGATCACATTGAATACCAACCCGATCCACCCATTAAAACTGGTACAAAAGCTGTAGGTGATGAGAGCGCAACGGTATCCATTTTTAGATTGACAAGGGAGCAGCTCAACATCTTGAAAGCCAAGTCTAAGGAAGATGGGAACACAATCAACTATACCACATATGAGATGTTGGCAGGCCATGTTTGGAGATGTGCATCTGTGGCACGTGAACTTCCTGATGATCAAGAGACCAAACTACATATTGCAGTTGATGGAAGGTCCAGACTGCAACCCCCACTCCCACCTGGTTTCTTTGGCAATGTGGTTTTTGCAGGCGCACCAATTGCTGCAGCAGGGGATCTCAAATCAAAACCAACATGGTATGCTGCAAGCTGTATTCATGATACTGTTGTGCGTATGGACAACGATTATCTTAGATCAGCACTGGACTATCTTGAACTTCAGCCTGACCTGTCACCCCTTGTTCGCGGAGCTCATACTTTTAGGTGCCCGAGACTTGGAATAACTAGTTGGTCTAGGCTGCCGATCTATGATGCTGATTTCGGTTGGGGTCGACCTATTTTCATGGGGCCTGGTGGAATGGGATATGAGGGGTTGGCTTTTGTGTTACCAAGTGCAACAAATGATGGAAGTTTATCGGTGGCCATTTCTCTGCAATCTCAACATATGCAATCATTCTCCAAGTTGTTGTATGAGATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

441

Amino Acids

48.47

Weight (kDa)

5.85

Isoelectric Point (pI)

35.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	58, 178
Acc36I	ACCTGC	3 cut(s)	58, 178, 424
AccB1I	GGYRCC	2 cut(s)	243, 1107
AccI	GTMKAC	2 cut(s)	126, 1174
AccII	CGCG	4 cut(s)	270, 299, 353, 1089
AccIII	TCCGGA	1 cut(s)	369
AciI	CCGC	7 cut(s)	5, 50, 185, 239, 268, 270, 1089
AclI	AACGTT	1 cut(s)	35
AclWI	GGATC	2 cut(s)	638, 966
AcoI	YGGCCR	2 cut(s)	265, 1263
AcuI	CTGAAG	1 cut(s)	1046
AcvI	CACGTG	1 cut(s)	827
AcyI	GRCGYC	2 cut(s)	59, 244
AdeI	CACNNNGTG	1 cut(s)	470
AfaI	GTAC	1 cut(s)	664
AfiI	CCNNNNNNNGG	4 cut(s)	238, 239, 253, 1118
AgsI	TTSAA	4 cut(s)	448, 632, 736, 1058
AhlI	ACTAGT	1 cut(s)	1127
AjnI	CCWGG	3 cut(s)	477, 904, 1192
AjuI	GAANNNNNNNTTGG	2 cut(s)	1114, 1146
AluBI	AGCT	5 cut(s)	376, 671, 724, 993, 1094
AluI	AGCT	5 cut(s)	376, 671, 724, 993, 1094
Alw21I	GWGCWC	3 cut(s)	159, 195, 1096
Alw26I	GTCTC	5 cut(s)	50, 311, 515, 842, 1108
Alw44I	GTGCAC	1 cut(s)	155
AlwI	GGATC	2 cut(s)	638, 966
AlwNI	CAGNNNCTG	1 cut(s)	73
Ama87I	CYCGRG	4 cut(s)	248, 362, 543, 1111
Aor13HI	TCCGGA	1 cut(s)	369
AoxI	GGCC	7 cut(s)	213, 265, 475, 499, 796, 1190, 1263
ApaLI	GTGCAC	1 cut(s)	155
ApeKI	GCWGC	5 cut(s)	721, 947, 950, 986, 1141
AspLEI	GCGC	7 cut(s)	205, 246, 299, 301, 355, 689, 938
AspS9I	GGNCC	4 cut(s)	91, 214, 879, 1190
AsuHPI	GGTGA	3 cut(s)	52, 689, 1068
AvaI	CYCGRG	4 cut(s)	248, 362, 543, 1111
AvaII	GGWCC	2 cut(s)	91, 879
BaeGI	GKGCMC	4 cut(s)	159, 225, 598, 1112
BaeI	ACNNNNGTAYC	2 cut(s)	996, 1029
BalI	TGGCCA	1 cut(s)	1265
BanI	GGYRCC	2 cut(s)	243, 1107
BanII	GRGCYC	2 cut(s)	326, 1096
BauI	CACGAG	1 cut(s)	218
BbrPI	CACGTG	1 cut(s)	827
Bbv12I	GWGCWC	3 cut(s)	159, 195, 1096
BbvI	GCAGC	5 cut(s)	733, 934, 962, 973, 1128
BccI	CCATC	6 cut(s)	247, 338, 491, 749, 866, 1241
BceAI	ACGGC	2 cut(s)	280, 371
BcgI	CGANNNNNNTGC	4 cut(s)	52, 86, 199, 233
BciT130I	CCWGG	3 cut(s)	479, 906, 1194
BciVI	GTATCC	1 cut(s)	706
BclI	TGATCA	1 cut(s)	841
BcoDI	GTCTC	5 cut(s)	50, 311, 515, 842, 1108
BcuI	ACTAGT	1 cut(s)	1127
BfaI	CTAG	2 cut(s)	1128, 1137
BfmI	CTRYAG	3 cut(s)	133, 672, 948
BfoI	RGCGCY	2 cut(s)	206, 247
BfuAI	ACCTGC	3 cut(s)	58, 178, 424
BfuI	GTATCC	1 cut(s)	706
BisI	GCNGC	7 cut(s)	268, 271, 722, 948, 951, 987, 1142
BlpI	GCTNAGC	1 cut(s)	206
BlsI	GCNGC	7 cut(s)	269, 272, 723, 949, 952, 988, 1143
Bme1390I	CCNGG	3 cut(s)	479, 906, 1194
Bme18I	GGWCC	2 cut(s)	91, 879
BmeT110I	CYCGRG	4 cut(s)	248, 362, 543, 1111
BmgT120I	GGNCC	4 cut(s)	91, 214, 879, 1190
BmiI	GGNNCC	3 cut(s)	245, 1109, 1191
BmrFI	CCNGG	3 cut(s)	479, 906, 1194
BmsI	GCATC	2 cut(s)	824, 1144
BplI	GAGNNNNNCTC	2 cut(s)	308, 340
Bpu1102I	GCTNAGC	1 cut(s)	206
BpuEI	CTTGAG	1 cut(s)	179
BsaAI	YACGTR	1 cut(s)	827
BsaBI	GATNNNNATC	1 cut(s)	814
BsaHI	GRCGYC	2 cut(s)	59, 244
BsaI	GGTCTC	2 cut(s)	515, 842
BsaJI	CCNNGG	3 cut(s)	62, 247, 268
BsaWI	WCCGGW	1 cut(s)	369
BsaXI	ACNNNNNCTCC	4 cut(s)	20, 50, 882, 912
Bsc4I	CCNNNNNNNGG	4 cut(s)	238, 239, 253, 1118
Bse118I	RCCGGY	1 cut(s)	46
Bse1I	ACTGG	2 cut(s)	664, 1050
Bse3DI	GCAATG	1 cut(s)	925
Bse8I	GATNNNNATC	1 cut(s)	814
BseAI	TCCGGA	1 cut(s)	369
BseBI	CCWGG	3 cut(s)	479, 906, 1194
BseDI	CCNNGG	3 cut(s)	62, 247, 268
BseGI	GGATG	3 cut(s)	84, 258, 378
BseJI	GATNNNNATC	1 cut(s)	814
BseLI	CCNNNNNNNGG	4 cut(s)	238, 239, 253, 1118
BseMI	GCAATG	1 cut(s)	925
BseMII	CTCAG	1 cut(s)	306
BseNI	ACTGG	2 cut(s)	664, 1050
BsePI	GCGCGC	1 cut(s)	297
BseRI	GAGGAG	1 cut(s)	68
BseSI	GKGCMC	4 cut(s)	159, 225, 598, 1112
BseX3I	CGGCCG	1 cut(s)	265
BseXI	GCAGC	5 cut(s)	733, 934, 962, 973, 1128
BseYI	CCCAGC	1 cut(s)	382
Bsh1236I	CGCG	4 cut(s)	270, 299, 353, 1089
Bsh1285I	CGRYCG	1 cut(s)	268
BshFI	GGCC	7 cut(s)	215, 267, 477, 501, 798, 1192, 1265
BshNI	GGYRCC	2 cut(s)	243, 1107
BsiEI	CGRYCG	1 cut(s)	268
BsiHKAI	GWGCWC	3 cut(s)	159, 195, 1096
BsiHKCI	CYCGRG	4 cut(s)	248, 362, 543, 1111
BsiSI	CCGG	2 cut(s)	47, 370
BslI	CCNNNNNNNGG	4 cut(s)	238, 239, 253, 1118
BsmAI	GTCTC	5 cut(s)	50, 311, 515, 842, 1108
BsmBI	CGTCTC	2 cut(s)	50, 311
BsmI	GAATGC	1 cut(s)	617
BsnI	GGCC	7 cut(s)	215, 267, 477, 501, 798, 1192, 1265
Bso31I	GGTCTC	2 cut(s)	515, 842
BsoBI	CYCGRG	4 cut(s)	248, 362, 543, 1111
Bsp1286I	GDGCHC	7 cut(s)	159, 195, 225, 326, 598, 1096, 1112
Bsp13I	TCCGGA	1 cut(s)	369
Bsp143I	GATC	7 cut(s)	276, 622, 643, 841, 958, 1037, 1146
Bsp1720I	GCTNAGC	1 cut(s)	206
BspACI	CCGC	7 cut(s)	5, 50, 185, 239, 268, 270, 1089
BspANI	GGCC	7 cut(s)	215, 267, 477, 501, 798, 1192, 1265
BspCNI	CTCAG	1 cut(s)	307
BspEI	TCCGGA	1 cut(s)	369
BspFNI	CGCG	4 cut(s)	270, 299, 353, 1089
BspHI	TCATGA	1 cut(s)	1000
BspLI	GGNNCC	3 cut(s)	245, 1109, 1191
BspMAI	CTGCAG	1 cut(s)	952
BspMI	ACCTGC	3 cut(s)	58, 178, 424
BspPI	GGATC	2 cut(s)	638, 966
BspT107I	GGYRCC	2 cut(s)	243, 1107
BspTNI	GGTCTC	2 cut(s)	515, 842
BsrDI	GCAATG	1 cut(s)	925
BsrFI	RCCGGY	1 cut(s)	46
BsrI	ACTGG	2 cut(s)	664, 1050
BssAI	RCCGGY	1 cut(s)	46
BssECI	CCNNGG	3 cut(s)	62, 247, 268
BssHII	GCGCGC	1 cut(s)	297
BssMI	GATC	7 cut(s)	276, 622, 643, 841, 958, 1037, 1146
BssNI	GRCGYC	2 cut(s)	59, 244
BssSI	CACGAG	1 cut(s)	218
Bst2BI	CACGAG	1 cut(s)	218
Bst2UI	CCWGG	3 cut(s)	479, 906, 1194
Bst4CI	ACNGT	4 cut(s)	152, 161, 694, 1009
BstACI	GRCGYC	2 cut(s)	59, 244
BstAPI	GCANNNNNTGC	1 cut(s)	944
BstBAI	YACGTR	1 cut(s)	827
BstC8I	GCNNGC	7 cut(s)	48, 201, 299, 615, 796, 934, 991
BstDEI	CTNAG	4 cut(s)	206, 315, 747, 1034
BstDSI	CCRYGG	1 cut(s)	268
BstF5I	GGATG	3 cut(s)	84, 258, 378
BstFNI	CGCG	4 cut(s)	270, 299, 353, 1089
BstH2I	RGCGCY	2 cut(s)	206, 247
BstHHI	GCGC	7 cut(s)	205, 246, 299, 301, 355, 689, 938
BstKTI	GATC	7 cut(s)	279, 625, 646, 844, 961, 1040, 1149
BstMAI	GTCTC	5 cut(s)	50, 311, 515, 842, 1108
BstMBI	GATC	7 cut(s)	276, 622, 643, 841, 958, 1037, 1146
BstMCI	CGRYCG	1 cut(s)	268
BstMWI	GCNNNNNNNGC	3 cut(s)	267, 821, 944
BstNI	CCWGG	3 cut(s)	479, 906, 1194
BstSCI	CCNGG	3 cut(s)	477, 904, 1192
BstSFI	CTRYAG	3 cut(s)	133, 672, 948
BstSLI	GKGCMC	4 cut(s)	159, 225, 598, 1112
BstUI	CGCG	4 cut(s)	270, 299, 353, 1089
BstV1I	GCAGC	5 cut(s)	733, 934, 962, 973, 1128
BstX2I	RGATCY	1 cut(s)	958
BstYI	RGATCY	1 cut(s)	958
BstZI	CGGCCG	1 cut(s)	265
BsuI	GTATCC	1 cut(s)	706
BsuRI	GGCC	7 cut(s)	215, 267, 477, 501, 798, 1192, 1265
BtgI	CCRYGG	1 cut(s)	268
BtsCI	GGATG	3 cut(s)	84, 258, 378
BtsIMutI	CAGTG	2 cut(s)	157, 1043
BveI	ACCTGC	3 cut(s)	58, 178, 424
Cac8I	GCNNGC	7 cut(s)	48, 201, 299, 615, 796, 934, 991
CaiI	CAGNNNCTG	1 cut(s)	73
CciI	TCATGA	1 cut(s)	1000
CfoI	GCGC	7 cut(s)	205, 246, 299, 301, 355, 689, 938
Cfr10I	RCCGGY	1 cut(s)	46
Cfr13I	GGNCC	4 cut(s)	91, 214, 879, 1190
Cfr42I	CCGCGG	1 cut(s)	271
CseI	GACGC	2 cut(s)	67, 112
CsiI	ACCWGGT	1 cut(s)	904
Csp6I	GTAC	1 cut(s)	663
CspCI	CAANNNNNGTGG	2 cut(s)	436, 471
CviAII	CATG	5 cut(s)	528, 800, 978, 1001, 1186
CviQI	GTAC	1 cut(s)	663
DdeI	CTNAG	4 cut(s)	206, 315, 747, 1034
DinI	GGCGCC	1 cut(s)	245
DpnI	GATC	7 cut(s)	278, 624, 645, 843, 960, 1039, 1148
DpnII	GATC	7 cut(s)	276, 622, 643, 841, 958, 1037, 1146
DraIII	CACNNNGTG	1 cut(s)	470
EaeI	YGGCCR	2 cut(s)	265, 1263
EagI	CGGCCG	1 cut(s)	265
EciI	GGCGGA	1 cut(s)	65
Ecl136II	GAGCTC	1 cut(s)	1094
EclXI	CGGCCG	1 cut(s)	265
Eco24I	GRGCYC	2 cut(s)	326, 1096
Eco31I	GGTCTC	2 cut(s)	515, 842
Eco32I	GATATC	1 cut(s)	408
Eco47I	GGWCC	2 cut(s)	91, 879
Eco52I	CGGCCG	1 cut(s)	265
Eco53kI	GAGCTC	1 cut(s)	1094
Eco57I	CTGAAG	1 cut(s)	1046
Eco72I	CACGTG	1 cut(s)	827
Eco88I	CYCGRG	4 cut(s)	248, 362, 543, 1111
EcoICRI	GAGCTC	1 cut(s)	1094
EcoO109I	RGGNCCY	2 cut(s)	214, 1190
EcoRII	CCWGG	3 cut(s)	477, 904, 1192
EcoRV	GATATC	1 cut(s)	408
EcoT38I	GRGCYC	2 cut(s)	326, 1096
EgeI	GGCGCC	1 cut(s)	245
EheI	GGCGCC	1 cut(s)	245
Esp3I	CGTCTC	2 cut(s)	50, 311
FaeI	CATG	5 cut(s)	531, 803, 981, 1004, 1189
FatI	CATG	5 cut(s)	527, 799, 977, 1000, 1185
FauI	CCCGC	2 cut(s)	192, 232
FauNDI	CATATG	2 cut(s)	781, 1287
FbaI	TGATCA	1 cut(s)	841
FblI	GTMKAC	2 cut(s)	126, 1174
Fnu4HI	GCNGC	7 cut(s)	268, 271, 722, 948, 951, 987, 1142
FokI	GGATG	3 cut(s)	91, 265, 365
FriOI	GRGCYC	2 cut(s)	326, 1096
Fsp4HI	GCNGC	7 cut(s)	268, 271, 722, 948, 951, 987, 1142
FspBI	CTAG	2 cut(s)	1128, 1137
GlaI	GCGC	7 cut(s)	204, 245, 298, 300, 354, 688, 937
GluI	GCNGC	7 cut(s)	268, 271, 722, 948, 951, 987, 1142
GsaI	CCCAGC	1 cut(s)	386
HaeII	RGCGCY	2 cut(s)	206, 247
HaeIII	GGCC	7 cut(s)	215, 267, 477, 501, 798, 1192, 1265
HapII	CCGG	2 cut(s)	47, 370
HgaI	GACGC	2 cut(s)	67, 112
HhaI	GCGC	7 cut(s)	205, 246, 299, 301, 355, 689, 938
Hin1I	GRCGYC	2 cut(s)	59, 244
Hin1II	CATG	5 cut(s)	531, 803, 981, 1004, 1189
Hin6I	GCGC	7 cut(s)	203, 244, 297, 299, 353, 687, 936
HinP1I	GCGC	7 cut(s)	203, 244, 297, 299, 353, 687, 936
HincII	GTYRAC	3 cut(s)	13, 33, 1175
HindII	GTYRAC	3 cut(s)	13, 33, 1175
HinfI	GANTC	2 cut(s)	29, 358
HpaII	CCGG	2 cut(s)	47, 370
HphI	GGTGA	3 cut(s)	52, 689, 1068
Hpy166II	GTNNAC	6 cut(s)	13, 33, 127, 157, 830, 1175
Hpy188I	TCNGA	2 cut(s)	292, 535
Hpy8I	GTNNAC	6 cut(s)	13, 33, 127, 157, 830, 1175
Hpy99I	CGWCG	1 cut(s)	338
HpyAV	CCTTC	3 cut(s)	235, 251, 870
HpyCH4III	ACNGT	4 cut(s)	152, 161, 694, 1009
HpyCH4IV	ACGT	3 cut(s)	15, 35, 826
HpyF10VI	GCNNNNNNNGC	3 cut(s)	267, 821, 944
HpyF3I	CTNAG	4 cut(s)	206, 315, 747, 1034
HpySE526I	ACGT	3 cut(s)	15, 35, 826
Hsp92I	GRCGYC	2 cut(s)	59, 244
Hsp92II	CATG	5 cut(s)	531, 803, 981, 1004, 1189
HspAI	GCGC	7 cut(s)	203, 244, 297, 299, 353, 687, 936
KasI	GGCGCC	1 cut(s)	243
Kpn2I	TCCGGA	1 cut(s)	369
KroI	GCCGGC	1 cut(s)	46
KroNI	GCCGGC	1 cut(s)	48
Ksp22I	TGATCA	1 cut(s)	841
KspI	CCGCGG	1 cut(s)	271
Kzo9I	GATC	7 cut(s)	276, 622, 643, 841, 958, 1037, 1146
LmnI	GCTCC	2 cut(s)	718, 1091
Lsp1109I	GCAGC	5 cut(s)	733, 934, 962, 973, 1128
LweI	GCATC	2 cut(s)	824, 1144
MabI	ACCWGGT	1 cut(s)	904
MaeI	CTAG	2 cut(s)	1128, 1137
MaeII	ACGT	3 cut(s)	15, 35, 826
MaeIII	GTNAC	4 cut(s)	436, 462, 1074, 1227
MalI	GATC	7 cut(s)	278, 624, 645, 843, 960, 1039, 1148
MboI	GATC	7 cut(s)	276, 622, 643, 841, 958, 1037, 1146
MboII	GAAGA	2 cut(s)	169, 764
MfeI	CAATTG	1 cut(s)	942
MflI	RGATCY	1 cut(s)	958
MhlI	GDGCHC	7 cut(s)	159, 195, 225, 326, 598, 1096, 1112
MlsI	TGGCCA	1 cut(s)	1265
MluCI	AATT	3 cut(s)	286, 561, 942
MluNI	TGGCCA	1 cut(s)	1265
Mly113I	GGCGCC	1 cut(s)	244
MlyI	GAGTC	2 cut(s)	38, 352
MnlI	CCTC	9 cut(s)	18, 46, 57, 227, 257, 286, 431, 539, 1204
Mox20I	TGGCCA	1 cut(s)	1265
MroI	TCCGGA	1 cut(s)	369
MroNI	GCCGGC	1 cut(s)	46
MscI	TGGCCA	1 cut(s)	1265
MseI	TTAA	1 cut(s)	654
Msp20I	TGGCCA	1 cut(s)	1265
MspA1I	CMGCKG	1 cut(s)	270
MspI	CCGG	2 cut(s)	47, 370
MspR9I	CCNGG	3 cut(s)	479, 906, 1194
MunI	CAATTG	1 cut(s)	942
Mva1269I	GAATGC	1 cut(s)	617
MvaI	CCWGG	3 cut(s)	479, 906, 1194
MvnI	CGCG	4 cut(s)	270, 299, 353, 1089
MwoI	GCNNNNNNNGC	3 cut(s)	267, 821, 944
NaeI	GCCGGC	1 cut(s)	48
NarI	GGCGCC	1 cut(s)	244
NdeI	CATATG	2 cut(s)	781, 1287
NdeII	GATC	7 cut(s)	276, 622, 643, 841, 958, 1037, 1146
NgoMIV	GCCGGC	1 cut(s)	46
NlaIII	CATG	5 cut(s)	531, 803, 981, 1004, 1189
NlaIV	GGNNCC	3 cut(s)	245, 1109, 1191
NmeAIII	GCCGAG	1 cut(s)	87
NmuCI	GTSAC	3 cut(s)	436, 462, 1074
PaeR7I	CTCGAG	2 cut(s)	362, 543
PagI	TCATGA	1 cut(s)	1000
PaqCI	CACCTGC	2 cut(s)	58, 178
PauI	GCGCGC	1 cut(s)	297
PcsI	WCGNNNNNNNCGW	2 cut(s)	270, 342
PctI	GAATGC	1 cut(s)	617
PdiI	GCCGGC	1 cut(s)	48
PkrI	GCNGC	7 cut(s)	269, 272, 723, 949, 952, 988, 1143
PleI	GAGTC	2 cut(s)	37, 352
PluTI	GGCGCC	1 cut(s)	247
PmaCI	CACGTG	1 cut(s)	827
PmlI	CACGTG	1 cut(s)	827
PpsI	GAGTC	2 cut(s)	37, 352
Ppu21I	YACGTR	1 cut(s)	827
Psp124BI	GAGCTC	1 cut(s)	1096
Psp1406I	AACGTT	1 cut(s)	35
Psp6I	CCWGG	3 cut(s)	477, 904, 1192
PspCI	CACGTG	1 cut(s)	827
PspFI	CCCAGC	1 cut(s)	382
PspGI	CCWGG	3 cut(s)	477, 904, 1192
PspN4I	GGNNCC	3 cut(s)	245, 1109, 1191
PspPI	GGNCC	4 cut(s)	91, 214, 879, 1190
PspXI	VCTCGAGB	1 cut(s)	543
PstI	CTGCAG	1 cut(s)	952
PstNI	CAGNNNCTG	1 cut(s)	73
PsuI	RGATCY	1 cut(s)	958
PteI	GCGCGC	1 cut(s)	297
RsaI	GTAC	1 cut(s)	664
RsaNI	GTAC	1 cut(s)	663
SacI	GAGCTC	1 cut(s)	1096
SacII	CCGCGG	1 cut(s)	271
SalI	GTCGAC	1 cut(s)	1173
SaqAI	TTAA	1 cut(s)	654
SatI	GCNGC	7 cut(s)	268, 271, 722, 948, 951, 987, 1142
Sau3AI	GATC	7 cut(s)	276, 622, 643, 841, 958, 1037, 1146
Sau96I	GGNCC	4 cut(s)	91, 214, 879, 1190
SchI	GAGTC	2 cut(s)	38, 352
ScrFI	CCNGG	3 cut(s)	479, 906, 1194
SduI	GDGCHC	7 cut(s)	159, 195, 225, 326, 598, 1096, 1112
SexAI	ACCWGGT	1 cut(s)	904
SfaNI	GCATC	2 cut(s)	824, 1144
SfcI	CTRYAG	3 cut(s)	133, 672, 948
SfoI	GGCGCC	1 cut(s)	245
Sfr274I	CTCGAG	2 cut(s)	362, 543
Sfr303I	CCGCGG	1 cut(s)	271
SgrBI	CCGCGG	1 cut(s)	271
SinI	GGWCC	2 cut(s)	91, 879
SlaI	CTCGAG	2 cut(s)	362, 543
SmlI	CTYRAG	3 cut(s)	194, 362, 543
SmoI	CTYRAG	3 cut(s)	194, 362, 543
SpeI	ACTAGT	1 cut(s)	1127
Sse9I	AATT	3 cut(s)	286, 561, 942
SsiI	CCGC	7 cut(s)	5, 50, 185, 239, 268, 270, 1089
SspDI	GGCGCC	1 cut(s)	243
SspMI	CTAG	2 cut(s)	1128, 1137
SstI	GAGCTC	1 cut(s)	1096
StyD4I	CCNGG	3 cut(s)	477, 904, 1192
TaaI	ACNGT	4 cut(s)	152, 161, 694, 1009
TaiI	ACGT	3 cut(s)	18, 38, 829
TaqI	TCGA	8 cut(s)	180, 279, 333, 363, 398, 544, 621, 1174
TasI	AATT	3 cut(s)	286, 561, 942
TauI	GCSGC	2 cut(s)	270, 273
Tru1I	TTAA	1 cut(s)	654
Tru9I	TTAA	1 cut(s)	654
TscAI	CASTG	2 cut(s)	157, 1050
TseFI	GTSAC	3 cut(s)	436, 462, 1074
TseI	GCWGC	5 cut(s)	721, 947, 950, 986, 1141
Tsp45I	GTSAC	3 cut(s)	436, 462, 1074
TspDTI	ATGAA	3 cut(s)	562, 989, 1174
TspRI	CASTG	2 cut(s)	157, 1050
VneI	GTGCAC	1 cut(s)	155
VpaK11BI	GGWCC	2 cut(s)	91, 879
XhoI	CTCGAG	2 cut(s)	362, 543
XmiI	GTMKAC	2 cut(s)	126, 1174
XspI	CTAG	2 cut(s)	1128, 1137

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.