Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Reverse (-)

52943520 .. 52946826

Gene Structure 3307 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG358000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1344 bp

ATGGCGATGGTGAGCGTCACCGTGAAGGAGTCGACGATAGTGAAGCCGTCGGAGGAGATGGCGCCGCGGTCGCTGTGGAACGCCAACGTCGACCTCGTGATTCCGAGCATGCACACCCCCAGCGTCTACTTCTACCGCCCGAACGGAGCGTCCAACTTCTTCGAGCCGCGCGTGCTCAAACACGCTCTCTCGAAGGCTCTGGTGCCGTTCTACCCCATGGCGGGGCGTCTGAAGCGCGACGACGACGGTCGTATCGAGATCGATTGTAATGGCGAGGGCGTGCTGTTTGTCGTCGCTGAGACAAGCTCTGTGATCGATGATTTTGGTGATTTTGCCCCCACTCTCGAGCTCCGGAAGCTCATCCCCACCGTTGATTACGCCGCTGGGATTTCTTCGTATCCGCTCCTGGTCTTGCAGAAGCTTACTAGGCCCGGGATCTTTTCTGTGCAGGTCACATACTTCAAATGTGGTGGAGTGTCACTTGGTGTTGGCATGCAACATCATGTTGCAGATGGATTTTCTGGTCTCCACTTTGTGAATACATGGTCTGATATGGCTCGAGGTCTTGACCTTACAATTCCACCATTCATCAACAGGACATTACTTCGTGCCCGAGACCCACCTCAGCCTGAATTCCCTCACATTGAATACCAACCTGCTCCACCCATGAAACATCCCCAGCAGAGCACAAAACCTGGTGCGGAGGAGACAACTATCGCCATCTTTAGATTGACCCGCGAACAACTCAACACCTTGAAAGCCAAGTCTAAGGAAGATGGCAACACTGTCAACTATAGCTCATATGAGATGTTGGCAGGTCATGTTTGGAGATGTGTATGTAAGGCGCGTGAACTTCCCGATGATCAAGACACCAAATTATATATTGCTACTGATGGCAGGTCCAGATTGCAACCCCCACTCCCACCTGGTTACTTTGGCAATGTGATTTTCACAGCCACACCTATTGCTGTAGCTGGGGACCTCCAATCAAAACCAACATGGTATGCGGCAAGCAAGATTCACAATGCTTTGGTGCGTATGGACAATGATTATCTTAGATCTGCTCTTGACTACCTTGAGCTTCAGCCTGATCTTTCAGCCCTTGTCCGTGGGGCTCATACTTTTAGGTGTCCCAATCTTGGGATTACAAGTTGGGTTAGGCTGCCGATCCATGATGCCGATTTTGGGTGGGGTCGACCCATTTTCATGGGACCTGGTGGAATCGGATACGAGGGGCTGGCATTTATAATACCAAGTGCAACTAATGACGGGAGTTTATCAGTTGCCATTTCCCTGCAATCTGAACATATGAAATCATTTTCGAAGCTGCTGTACGACATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

447

Amino Acids

49.52

Weight (kDa)

6.46

Isoelectric Point (pI)

39.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	5 - 444	1.3e-106	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1247
Acc36I	ACCTGC	4 cut(s)	439, 664, 806, 888
AccB1I	GGYRCC	2 cut(s)	61, 202
AccBSI	CCGCTC	1 cut(s)	403
AccI	GTMKAC	4 cut(s)	32, 90, 126, 1195
AccII	CGCG	6 cut(s)	67, 169, 171, 237, 738, 847
AccIII	TCCGGA	1 cut(s)	351
AclWI	GGATC	2 cut(s)	443, 1162
AcsI	RAATTY	1 cut(s)	632
AcuI	CTGAAG	2 cut(s)	251, 1067
AcyI	GRCGYC	2 cut(s)	62, 226
AdeI	CACNNNGTG	2 cut(s)	485, 535
AfaI	GTAC	1 cut(s)	1334
AfiI	CCNNNNNNNGG	6 cut(s)	220, 221, 222, 1139, 1140, 1185
AflIII	ACRYGT	1 cut(s)	1338
AgsI	TTSAA	3 cut(s)	463, 647, 757
AjnI	CCWGG	4 cut(s)	405, 694, 925, 1213
AloI	GAACNNNNNNTCC	2 cut(s)	134, 166
AluBI	AGCT	8 cut(s)	306, 349, 358, 421, 798, 974, 1081, 1327
AluI	AGCT	8 cut(s)	306, 349, 358, 421, 798, 974, 1081, 1327
Alw21I	GWGCWC	3 cut(s)	177, 351, 689
Alw26I	GTCTC	4 cut(s)	293, 530, 609, 701
AlwI	GGATC	2 cut(s)	443, 1162
Ama87I	CYCGRG	4 cut(s)	344, 431, 558, 612
Aor13HI	TCCGGA	1 cut(s)	351
AoxI	GGCC	1 cut(s)	428
ApeKI	GCWGC	2 cut(s)	1162, 1327
ApoI	RAATTY	1 cut(s)	632
ArsI	GACNNNNNNTTYG	2 cut(s)	134, 166
AspLEI	GCGC	4 cut(s)	64, 171, 237, 847
AspS9I	GGNCC	4 cut(s)	429, 900, 979, 1211
AsuC2I	CCSGG	2 cut(s)	432, 433
AsuHPI	GGTGA	3 cut(s)	10, 22, 338
AsuII	TTCGAA	1 cut(s)	1322
AvaI	CYCGRG	4 cut(s)	344, 431, 558, 612
AvaII	GGWCC	3 cut(s)	900, 979, 1211
BaeGI	GKGCMC	1 cut(s)	613
BaeI	ACNNNNGTAYC	2 cut(s)	235, 268
BanI	GGYRCC	2 cut(s)	61, 202
BanII	GRGCYC	2 cut(s)	351, 1117
BarI	GAAGNNNNNNTAC	1 cut(s)	1316
BauI	CACGAG	1 cut(s)	95
Bbv12I	GWGCWC	3 cut(s)	177, 351, 689
BbvCI	CCTCAGC	1 cut(s)	624
BbvI	GCAGC	2 cut(s)	1149, 1314
BccI	CCATC	5 cut(s)	52, 506, 728, 770, 887
BceAI	ACGGC	2 cut(s)	31, 190
BciT130I	CCWGG	4 cut(s)	407, 696, 927, 1215
BciVI	GTATCC	2 cut(s)	408, 1220
BclI	TGATCA	1 cut(s)	862
BcnI	CCSGG	2 cut(s)	432, 433
BcoDI	GTCTC	4 cut(s)	293, 530, 609, 701
BfaI	CTAG	1 cut(s)	426
BfmI	CTRYAG	2 cut(s)	793, 969
BfoI	RGCGCY	1 cut(s)	65
BfuAI	ACCTGC	4 cut(s)	439, 664, 806, 888
BfuI	GTATCC	2 cut(s)	408, 1220
BglII	AGATCT	1 cut(s)	1058
BisI	GCNGC	6 cut(s)	65, 167, 381, 1008, 1163, 1328
BlsI	GCNGC	6 cut(s)	66, 168, 382, 1009, 1164, 1329
Bme1390I	CCNGG	6 cut(s)	407, 432, 433, 696, 927, 1215
Bme18I	GGWCC	3 cut(s)	900, 979, 1211
BmeT110I	CYCGRG	4 cut(s)	344, 431, 558, 612
BmgT120I	GGNCC	4 cut(s)	429, 900, 979, 1211
BmiI	GGNNCC	4 cut(s)	63, 204, 980, 1212
BmrFI	CCNGG	6 cut(s)	407, 432, 433, 696, 927, 1215
BmsI	GCATC	1 cut(s)	1165
BoxI	GACNNNNGTC	1 cut(s)	246
BplI	GAGNNNNNCTC	2 cut(s)	290, 322
Bpu10I	CCTNAGC	1 cut(s)	624
Bpu14I	TTCGAA	1 cut(s)	1322
BpuEI	CTTGAG	1 cut(s)	1097
BpuMI	CCSGG	2 cut(s)	432, 433
Bsa29I	ATCGAT	2 cut(s)	261, 315
BsaHI	GRCGYC	2 cut(s)	62, 226
BsaI	GGTCTC	2 cut(s)	530, 609
BsaJI	CCNNGG	4 cut(s)	65, 216, 431, 1108
BsaWI	WCCGGW	1 cut(s)	351
BsaXI	ACNNNNNCTCC	2 cut(s)	903, 933
Bsc4I	CCNNNNNNNGG	6 cut(s)	220, 221, 222, 1139, 1140, 1185
Bse3DI	GCAATG	1 cut(s)	946
BseAI	TCCGGA	1 cut(s)	351
BseBI	CCWGG	4 cut(s)	407, 696, 927, 1215
BseCI	ATCGAT	2 cut(s)	261, 315
BseDI	CCNNGG	4 cut(s)	65, 216, 431, 1108
BseGI	GGATG	2 cut(s)	360, 673
BseLI	CCNNNNNNNGG	6 cut(s)	220, 221, 222, 1139, 1140, 1185
BseMI	GCAATG	1 cut(s)	946
BseMII	CTCAG	2 cut(s)	288, 638
BseRI	GAGGAG	2 cut(s)	68, 719
BseSI	GKGCMC	1 cut(s)	613
BseXI	GCAGC	2 cut(s)	1149, 1314
BseYI	CCCAGC	4 cut(s)	119, 383, 678, 974
BsgI	GTGCAG	1 cut(s)	467
Bsh1236I	CGCG	6 cut(s)	67, 169, 171, 237, 738, 847
Bsh1285I	CGRYCG	2 cut(s)	71, 250
BshFI	GGCC	1 cut(s)	430
BshNI	GGYRCC	2 cut(s)	61, 202
BshVI	ATCGAT	2 cut(s)	261, 315
BsiEI	CGRYCG	2 cut(s)	71, 250
BsiHKAI	GWGCWC	3 cut(s)	177, 351, 689
BsiHKCI	CYCGRG	4 cut(s)	344, 431, 558, 612
BsiSI	CCGG	2 cut(s)	352, 432
BslFI	GGGAC	3 cut(s)	992, 1116, 1224
BslI	CCNNNNNNNGG	6 cut(s)	220, 221, 222, 1139, 1140, 1185
BsmAI	GTCTC	4 cut(s)	293, 530, 609, 701
BsmFI	GGGAC	3 cut(s)	992, 1116, 1224
BsnI	GGCC	1 cut(s)	430
Bso31I	GGTCTC	2 cut(s)	530, 609
BsoBI	CYCGRG	4 cut(s)	344, 431, 558, 612
Bsp119I	TTCGAA	1 cut(s)	1322
Bsp1286I	GDGCHC	5 cut(s)	177, 351, 613, 689, 1117
Bsp13I	TCCGGA	1 cut(s)	351
Bsp143I	GATC	7 cut(s)	258, 312, 435, 862, 1058, 1090, 1167
Bsp19I	CCATGG	1 cut(s)	216
BspANI	GGCC	1 cut(s)	430
BspCNI	CTCAG	2 cut(s)	289, 637
BspDI	ATCGAT	2 cut(s)	261, 315
BspEI	TCCGGA	1 cut(s)	351
BspFNI	CGCG	6 cut(s)	67, 169, 171, 237, 738, 847
BspLI	GGNNCC	4 cut(s)	63, 204, 980, 1212
BspMI	ACCTGC	4 cut(s)	439, 664, 806, 888
BspPI	GGATC	2 cut(s)	443, 1162
BspT104I	TTCGAA	1 cut(s)	1322
BspT107I	GGYRCC	2 cut(s)	61, 202
BspTNI	GGTCTC	2 cut(s)	530, 609
BsrBI	CCGCTC	1 cut(s)	403
BsrDI	GCAATG	1 cut(s)	946
BssECI	CCNNGG	4 cut(s)	65, 216, 431, 1108
BssMI	GATC	7 cut(s)	258, 312, 435, 862, 1058, 1090, 1167
BssNI	GRCGYC	2 cut(s)	62, 226
BssSI	CACGAG	1 cut(s)	95
BssT1I	CCWWGG	1 cut(s)	216
Bst2BI	CACGAG	1 cut(s)	95
Bst2UI	CCWGG	4 cut(s)	407, 696, 927, 1215
Bst4CI	ACNGT	4 cut(s)	22, 248, 370, 787
BstACI	GRCGYC	2 cut(s)	62, 226
BstBI	TTCGAA	1 cut(s)	1322
BstC8I	GCNNGC	6 cut(s)	110, 173, 281, 494, 1012, 1239
BstDEI	CTNAG	4 cut(s)	297, 624, 768, 1055
BstDSI	CCRYGG	3 cut(s)	65, 216, 1108
BstF5I	GGATG	2 cut(s)	360, 673
BstFNI	CGCG	6 cut(s)	67, 169, 171, 237, 738, 847
BstH2I	RGCGCY	1 cut(s)	65
BstHHI	GCGC	4 cut(s)	64, 171, 237, 847
BstKTI	GATC	7 cut(s)	261, 315, 438, 865, 1061, 1093, 1170
BstMAI	GTCTC	4 cut(s)	293, 530, 609, 701
BstMBI	GATC	7 cut(s)	258, 312, 435, 862, 1058, 1090, 1167
BstMCI	CGRYCG	2 cut(s)	71, 250
BstMWI	GCNNNNNNNGC	5 cut(s)	70, 172, 232, 355, 427
BstNI	CCWGG	4 cut(s)	407, 696, 927, 1215
BstNSI	RCATGY	3 cut(s)	112, 496, 1342
BstPAI	GACNNNNGTC	1 cut(s)	246
BstSCI	CCNGG	6 cut(s)	405, 430, 431, 694, 925, 1213
BstSFI	CTRYAG	2 cut(s)	793, 969
BstSLI	GKGCMC	1 cut(s)	613
BstUI	CGCG	6 cut(s)	67, 169, 171, 237, 738, 847
BstV1I	GCAGC	2 cut(s)	1149, 1314
BstX2I	RGATCY	2 cut(s)	435, 1058
BstXI	CCANNNNNNTGG	1 cut(s)	1207
BstYI	RGATCY	2 cut(s)	435, 1058
Bsu15I	ATCGAT	2 cut(s)	261, 315
BsuI	GTATCC	2 cut(s)	408, 1220
BsuRI	GGCC	1 cut(s)	430
BsuTUI	ATCGAT	2 cut(s)	261, 315
BtgI	CCRYGG	3 cut(s)	65, 216, 1108
BtgZI	GCGATG	1 cut(s)	20
BtsCI	GGATG	2 cut(s)	360, 673
BtsIMutI	CAGTG	1 cut(s)	783
BveI	ACCTGC	4 cut(s)	439, 664, 806, 888
Cac8I	GCNNGC	6 cut(s)	110, 173, 281, 494, 1012, 1239
CfoI	GCGC	4 cut(s)	64, 171, 237, 847
Cfr13I	GGNCC	4 cut(s)	429, 900, 979, 1211
Cfr42I	CCGCGG	1 cut(s)	68
Cfr9I	CCCGGG	1 cut(s)	431
ClaI	ATCGAT	2 cut(s)	261, 315
CseI	GACGC	4 cut(s)	4, 112, 138, 215
CsiI	ACCWGGT	3 cut(s)	694, 925, 1213
Csp6I	GTAC	1 cut(s)	1333
CspCI	CAANNNNNGTGG	4 cut(s)	451, 486, 946, 981
CviQI	GTAC	1 cut(s)	1333
DdeI	CTNAG	4 cut(s)	297, 624, 768, 1055
DinI	GGCGCC	1 cut(s)	63
DpnI	GATC	7 cut(s)	260, 314, 437, 864, 1060, 1092, 1169
DpnII	GATC	7 cut(s)	258, 312, 435, 862, 1058, 1090, 1167
DraIII	CACNNNGTG	2 cut(s)	485, 535
Ecl136II	GAGCTC	1 cut(s)	349
Eco130I	CCWWGG	1 cut(s)	216
Eco24I	GRGCYC	2 cut(s)	351, 1117
Eco31I	GGTCTC	2 cut(s)	530, 609
Eco47I	GGWCC	3 cut(s)	900, 979, 1211
Eco53kI	GAGCTC	1 cut(s)	349
Eco57I	CTGAAG	2 cut(s)	251, 1067
Eco88I	CYCGRG	4 cut(s)	344, 431, 558, 612
EcoICRI	GAGCTC	1 cut(s)	349
EcoO109I	RGGNCCY	2 cut(s)	979, 1211
EcoRI	GAATTC	1 cut(s)	632
EcoRII	CCWGG	4 cut(s)	405, 694, 925, 1213
EcoT14I	CCWWGG	1 cut(s)	216
EcoT38I	GRGCYC	2 cut(s)	351, 1117
EgeI	GGCGCC	1 cut(s)	63
EheI	GGCGCC	1 cut(s)	63
ErhI	CCWWGG	1 cut(s)	216
FaqI	GGGAC	3 cut(s)	992, 1116, 1224
FauI	CCCGC	2 cut(s)	214, 743
FauNDI	CATATG	2 cut(s)	802, 1308
FbaI	TGATCA	1 cut(s)	862
FblI	GTMKAC	4 cut(s)	32, 90, 126, 1195
Fnu4HI	GCNGC	6 cut(s)	65, 167, 381, 1008, 1163, 1328
FokI	GGATG	2 cut(s)	347, 660
FriOI	GRGCYC	2 cut(s)	351, 1117
Fsp4HI	GCNGC	6 cut(s)	65, 167, 381, 1008, 1163, 1328
FspBI	CTAG	1 cut(s)	426
GlaI	GCGC	4 cut(s)	63, 170, 236, 846
GluI	GCNGC	6 cut(s)	65, 167, 381, 1008, 1163, 1328
GsaI	CCCAGC	4 cut(s)	123, 387, 682, 978
HaeII	RGCGCY	1 cut(s)	65
HaeIII	GGCC	1 cut(s)	430
HapII	CCGG	2 cut(s)	352, 432
HgaI	GACGC	4 cut(s)	4, 112, 138, 215
HhaI	GCGC	4 cut(s)	64, 171, 237, 847
Hin1I	GRCGYC	2 cut(s)	62, 226
Hin6I	GCGC	4 cut(s)	62, 169, 235, 845
HinP1I	GCGC	4 cut(s)	62, 169, 235, 845
HincII	GTYRAC	4 cut(s)	33, 91, 790, 1196
HindII	GTYRAC	4 cut(s)	33, 91, 790, 1196
HindIII	AAGCTT	1 cut(s)	419
HinfI	GANTC	4 cut(s)	29, 100, 1018, 1221
HpaII	CCGG	2 cut(s)	352, 432
HphI	GGTGA	3 cut(s)	10, 22, 338
Hpy166II	GTNNAC	6 cut(s)	33, 91, 127, 790, 851, 1196
Hpy188I	TCNGA	6 cut(s)	52, 105, 231, 550, 1226, 1303
Hpy8I	GTNNAC	6 cut(s)	33, 91, 127, 790, 851, 1196
Hpy99I	CGWCG	7 cut(s)	37, 52, 92, 242, 245, 248, 296
HpyAV	CCTTC	2 cut(s)	19, 187
HpyCH4III	ACNGT	4 cut(s)	22, 248, 370, 787
HpyCH4IV	ACGT	1 cut(s)	87
HpyCH4V	TGCA	8 cut(s)	112, 415, 448, 496, 509, 910, 1259, 1297
HpyF10VI	GCNNNNNNNGC	5 cut(s)	70, 172, 232, 355, 427
HpyF3I	CTNAG	4 cut(s)	297, 624, 768, 1055
HpySE526I	ACGT	1 cut(s)	87
Hsp92I	GRCGYC	2 cut(s)	62, 226
HspAI	GCGC	4 cut(s)	62, 169, 235, 845
KasI	GGCGCC	1 cut(s)	61
Kpn2I	TCCGGA	1 cut(s)	351
Ksp22I	TGATCA	1 cut(s)	862
KspI	CCGCGG	1 cut(s)	68
Kzo9I	GATC	7 cut(s)	258, 312, 435, 862, 1058, 1090, 1167
LmnI	GCTCC	4 cut(s)	146, 354, 408, 664
Lsp1109I	GCAGC	2 cut(s)	1149, 1314
LweI	GCATC	1 cut(s)	1165
MabI	ACCWGGT	3 cut(s)	694, 925, 1213
MaeI	CTAG	1 cut(s)	426
MaeII	ACGT	1 cut(s)	87
MaeIII	GTNAC	4 cut(s)	16, 451, 477, 929
MalI	GATC	7 cut(s)	260, 314, 437, 864, 1060, 1092, 1169
MbiI	CCGCTC	1 cut(s)	403
MboI	GATC	7 cut(s)	258, 312, 435, 862, 1058, 1090, 1167
MboII	GAAGA	3 cut(s)	151, 384, 785
MflI	RGATCY	2 cut(s)	435, 1058
MhlI	GDGCHC	5 cut(s)	177, 351, 613, 689, 1117
MluCI	AATT	3 cut(s)	576, 632, 875
Mly113I	GGCGCC	1 cut(s)	62
MlyI	GAGTC	1 cut(s)	38
MmeI	TCCRAC	2 cut(s)	30, 177
MnlI	CCTC	9 cut(s)	46, 104, 268, 554, 633, 648, 697, 992, 1225
MroI	TCCGGA	1 cut(s)	351
MslI	CAYNNNNRTG	1 cut(s)	1205
MspA1I	CMGCKG	2 cut(s)	67, 383
MspI	CCGG	2 cut(s)	352, 432
MspR9I	CCNGG	6 cut(s)	407, 432, 433, 696, 927, 1215
MvaI	CCWGG	4 cut(s)	407, 696, 927, 1215
MvnI	CGCG	6 cut(s)	67, 169, 171, 237, 738, 847
MwoI	GCNNNNNNNGC	5 cut(s)	70, 172, 232, 355, 427
NarI	GGCGCC	1 cut(s)	62
NciI	CCSGG	2 cut(s)	432, 433
NcoI	CCATGG	1 cut(s)	216
NdeI	CATATG	2 cut(s)	802, 1308
NdeII	GATC	7 cut(s)	258, 312, 435, 862, 1058, 1090, 1167
NlaIV	GGNNCC	4 cut(s)	63, 204, 980, 1212
NmuCI	GTSAC	3 cut(s)	16, 451, 477
NspI	RCATGY	3 cut(s)	112, 496, 1342
NspV	TTCGAA	1 cut(s)	1322
PaeI	GCATGC	2 cut(s)	112, 496
PaeR7I	CTCGAG	2 cut(s)	344, 558
PciI	ACATGT	1 cut(s)	1338
PcsI	WCGNNNNNNNCGW	4 cut(s)	87, 93, 168, 252
PfeI	GAWTC	3 cut(s)	100, 1018, 1221
PkrI	GCNGC	6 cut(s)	66, 168, 382, 1009, 1164, 1329
PleI	GAGTC	1 cut(s)	37
PluTI	GGCGCC	1 cut(s)	65
PpsI	GAGTC	1 cut(s)	37
PpuMI	RGGWCCY	2 cut(s)	979, 1211
PscI	ACATGT	1 cut(s)	1338
PshAI	GACNNNNGTC	1 cut(s)	246
PsiI	TTATAA	1 cut(s)	1247
Psp124BI	GAGCTC	1 cut(s)	351
Psp5II	RGGWCCY	2 cut(s)	979, 1211
Psp6I	CCWGG	4 cut(s)	405, 694, 925, 1213
PspFI	CCCAGC	4 cut(s)	119, 383, 678, 974
PspGI	CCWGG	4 cut(s)	405, 694, 925, 1213
PspN4I	GGNNCC	4 cut(s)	63, 204, 980, 1212
PspPI	GGNCC	4 cut(s)	429, 900, 979, 1211
PspPPI	RGGWCCY	2 cut(s)	979, 1211
PspXI	VCTCGAGB	1 cut(s)	558
PsuI	RGATCY	2 cut(s)	435, 1058
RsaI	GTAC	1 cut(s)	1334
RsaNI	GTAC	1 cut(s)	1333
RseI	CAYNNNNRTG	1 cut(s)	1205
SacI	GAGCTC	1 cut(s)	351
SacII	CCGCGG	1 cut(s)	68
SalI	GTCGAC	3 cut(s)	31, 89, 1194
SatI	GCNGC	6 cut(s)	65, 167, 381, 1008, 1163, 1328
Sau3AI	GATC	7 cut(s)	258, 312, 435, 862, 1058, 1090, 1167
Sau96I	GGNCC	4 cut(s)	429, 900, 979, 1211
SchI	GAGTC	1 cut(s)	38
ScrFI	CCNGG	6 cut(s)	407, 432, 433, 696, 927, 1215
SduI	GDGCHC	5 cut(s)	177, 351, 613, 689, 1117
SexAI	ACCWGGT	3 cut(s)	694, 925, 1213
SfaNI	GCATC	1 cut(s)	1165
SfcI	CTRYAG	2 cut(s)	793, 969
SfoI	GGCGCC	1 cut(s)	63
Sfr274I	CTCGAG	2 cut(s)	344, 558
Sfr303I	CCGCGG	1 cut(s)	68
SfuI	TTCGAA	1 cut(s)	1322
SgrBI	CCGCGG	1 cut(s)	68
SinI	GGWCC	3 cut(s)	900, 979, 1211
SlaI	CTCGAG	2 cut(s)	344, 558
SmaI	CCCGGG	1 cut(s)	433
SmiMI	CAYNNNNRTG	1 cut(s)	1205
SmlI	CTYRAG	3 cut(s)	344, 558, 1076
SmoI	CTYRAG	3 cut(s)	344, 558, 1076
SphI	GCATGC	2 cut(s)	112, 496
Sse9I	AATT	3 cut(s)	576, 632, 875
SspDI	GGCGCC	1 cut(s)	61
SspMI	CTAG	1 cut(s)	426
SstI	GAGCTC	1 cut(s)	351
StyD4I	CCNGG	6 cut(s)	405, 430, 431, 694, 925, 1213
StyI	CCWWGG	1 cut(s)	216
TaaI	ACNGT	4 cut(s)	22, 248, 370, 787
TaiI	ACGT	1 cut(s)	90
TasI	AATT	3 cut(s)	576, 632, 875
TauI	GCSGC	4 cut(s)	67, 169, 383, 1010
TfiI	GAWTC	3 cut(s)	100, 1018, 1221
TscAI	CASTG	1 cut(s)	790
TseFI	GTSAC	3 cut(s)	16, 451, 477
TseI	GCWGC	2 cut(s)	1162, 1327
Tsp45I	GTSAC	3 cut(s)	16, 451, 477
TspDTI	ATGAA	4 cut(s)	577, 683, 1195, 1325
TspGWI	ACGGA	2 cut(s)	159, 1097
TspMI	CCCGGG	1 cut(s)	431
TspRI	CASTG	1 cut(s)	790
VpaK11BI	GGWCC	3 cut(s)	900, 979, 1211
XapI	RAATTY	1 cut(s)	632
XceI	RCATGY	3 cut(s)	112, 496, 1342
XhoI	CTCGAG	2 cut(s)	344, 558
XmaI	CCCGGG	1 cut(s)	431
XmiI	GTMKAC	4 cut(s)	32, 90, 126, 1195
XspI	CTAG	1 cut(s)	426

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.