Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Forward (+)

72895077 .. 72896441

Gene Structure 1365 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG454700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1365 bp

ATGGCGGTCAACGTCAGTGTGATTGAGTCGACAGTGGTGAGGCCAGCGGCGGAGACACCTCGGCAGTCCTTGTGGCTCTCGAACATGGACTTGGTGCAGCCCAGCACTCACACTCCCAGTATTTATATCTACAAGCCAAAAGTCGATGCTGGTGCAGACAAGGACAGTAATTTCTTTGACATGCATGTCTTGAAGGACGCTCTCGGCAAGGCCCTTGTGCCCTTTTACCCTTTGGCCGGCCGCCTGAAGCGAAAAATGGATGAGGGCGAGAAGGGTCGTCTCGAAATAGATTGCAATGCGGAGGGGGCCTTGTTTGTTGTGGCCCGTAGCAGCTCTTGCATCGATGACTTCGGCGATTTTGCACCCACTGCCGACTTCGGGAGAGGGCTTCTCCCTACCGTTGATTATTCCGGCGGGATATCTTCTTATCCTCTGTTGCTGGTACAGATCACATATTTAAAATGCGGTGGAGTGGCACTTGGTGTTCGCATAGACCATCACTTAGCAGATGGATTATCTGCTCTTCACTTTATAAATACATGGTCTGATATGGCTCGTGGTCTGGACCTTGCAATCCCACCAACAATCGACAGGACATTATTACTTCGCGCTCGAGACCCACCTCGGACTATACTCAACCACAATCACCACATTGTATACCAACCTCCTAATGACCACGATCAACATAAAAGCACTGGGGTAGAAACAGTAGTCTCGGTTCTTTCATTTACTAGGGAGCAGCTCAACATCTTGAAAGCTATGTCGACCTCTACAGAGGAAGAAGATGATATGAGTACTTTACCAATCAAGTATACCTCATTTGAGGTGTTTTCAGGTCATGTATGGAGATGTGCCTGCAAGGCACGTGAACTAGCTAATGATCAAGAAACCAAATTATTCTTTGCTGTAAACGGAAGGACCAGATTGCAACCCCCACTCCCACCTGGTTACTTTGGTAATGTGATTTTCAGAGCCGCAGCAACAGCTTTAGCAGGGGATCTTATATCAAAACCATTATCGTATGCCGCAAGCTGCATTCACAATGCTGTGGTGCGTATGGACGATGATTATGTTCGATCGGCACTCGACTATCTTGAACTTCAGCAGCGTCATCAGGGTTTGTCAAGCCTTGCTCATGGGACTCATGTTAGGTGCCCTAATCTTGGGATAACTAGCTGGTTTACGCTGCCCCTCTATGATGCTGATTTTGGGTGGGGGCGACCAAGTTTCATGGGACGCGCTGGAATTCCAAGTGAAGGGAAGGCATACATGATACCAAGTGCAACGAATTATGGTTTATCGCTGTGCATCAATCTGCATTCTCGGCATATGAACACGTTTTCCAAGTTGGTTTATGACATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

454

Amino Acids

50.17

Weight (kDa)

6.38

Isoelectric Point (pI)

41.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	4 - 450	3.8e-105	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	533
AasI	GACNNNNNNGTC	1 cut(s)	185
AccB1I	GGYRCC	1 cut(s)	1152
AccI	GTMKAC	4 cut(s)	29, 657, 764, 812
AccII	CGCG	2 cut(s)	609, 1239
AciI	CCGC	9 cut(s)	5, 47, 50, 241, 299, 414, 465, 975, 1026
AclWI	GGATC	1 cut(s)	1005
AcoI	YGGCCR	2 cut(s)	234, 238
AcsI	RAATTY	1 cut(s)	1245
AcuI	CTGAAG	2 cut(s)	266, 1085
AcvI	CACGTG	1 cut(s)	866
AdeI	CACNNNGTG	1 cut(s)	482
AfaI	GTAC	2 cut(s)	444, 796
AfiI	CCNNNNNNNGG	4 cut(s)	236, 378, 1163, 1256
AflIII	ACRYGT	1 cut(s)	1335
AgsI	TTSAA	3 cut(s)	193, 754, 1097
AjnI	CCWGG	1 cut(s)	943
AjuI	GAANNNNNNNTTGG	2 cut(s)	74, 106
AloI	GAACNNNNNNTCC	2 cut(s)	1325, 1357
AluBI	AGCT	7 cut(s)	333, 742, 758, 875, 986, 1032, 1176
AluI	AGCT	7 cut(s)	333, 742, 758, 875, 986, 1032, 1176
Alw26I	GTCTC	4 cut(s)	47, 284, 609, 718
AlwI	GGATC	1 cut(s)	1005
Ama87I	CYCGRG	1 cut(s)	612
AoxI	GGCC	6 cut(s)	41, 210, 234, 238, 306, 321
ApeKI	GCWGC	7 cut(s)	97, 330, 739, 977, 1032, 1105, 1186
ApoI	RAATTY	1 cut(s)	1245
AspLEI	GCGC	2 cut(s)	611, 1241
AspS9I	GGNCC	5 cut(s)	211, 306, 322, 565, 918
AsuHPI	GGTGA	2 cut(s)	49, 638
AvaI	CYCGRG	1 cut(s)	612
AvaII	GGWCC	2 cut(s)	565, 918
BaeGI	GKGCMC	2 cut(s)	222, 1157
BanI	GGYRCC	1 cut(s)	1152
BauI	CACGAG	1 cut(s)	555
BbrPI	CACGTG	1 cut(s)	866
BbvI	GCAGC	7 cut(s)	109, 342, 751, 989, 1019, 1117, 1173
BccI	CCATC	2 cut(s)	503, 504
BcgI	CGANNNNNNTGC	2 cut(s)	134, 168
BciT130I	CCWGG	1 cut(s)	945
BclI	TGATCA	1 cut(s)	880
BcoDI	GTCTC	4 cut(s)	47, 284, 609, 718
BfaI	CTAG	3 cut(s)	732, 872, 1173
BfmI	CTRYAG	1 cut(s)	771
BglI	GCCNNNNNGGC	1 cut(s)	860
BmcAI	AGTACT	1 cut(s)	796
Bme1390I	CCNGG	1 cut(s)	945
Bme18I	GGWCC	2 cut(s)	565, 918
BmeT110I	CYCGRG	1 cut(s)	612
BmgT120I	GGNCC	5 cut(s)	211, 306, 322, 565, 918
BmiI	GGNNCC	2 cut(s)	307, 1154
BmrFI	CCNGG	1 cut(s)	945
BmrI	ACTGGG	2 cut(s)	111, 705
BmsI	GCATC	4 cut(s)	136, 348, 1189, 1317
BmuI	ACTGGG	2 cut(s)	111, 705
BplI	GAGNNNNNCTC	2 cut(s)	375, 407
Bsa29I	ATCGAT	1 cut(s)	342
BsaAI	YACGTR	1 cut(s)	866
BsaI	GGTCTC	1 cut(s)	609
BsaJI	CCNNGG	2 cut(s)	59, 623
BsaXI	ACNNNNNCTCC	4 cut(s)	97, 127, 921, 951
Bsc4I	CCNNNNNNNGG	4 cut(s)	236, 378, 1163, 1256
Bse118I	RCCGGY	1 cut(s)	236
Bse1I	ACTGG	2 cut(s)	117, 700
Bse3DI	GCAATG	1 cut(s)	301
BseBI	CCWGG	1 cut(s)	945
BseCI	ATCGAT	1 cut(s)	342
BseDI	CCNNGG	2 cut(s)	59, 623
BseGI	GGATG	1 cut(s)	265
BseLI	CCNNNNNNNGG	4 cut(s)	236, 378, 1163, 1256
BseMI	GCAATG	1 cut(s)	301
BseNI	ACTGG	2 cut(s)	117, 700
BseSI	GKGCMC	2 cut(s)	222, 1157
BseX3I	CGGCCG	1 cut(s)	238
BseXI	GCAGC	7 cut(s)	109, 342, 751, 989, 1019, 1117, 1173
BseYI	CCCAGC	1 cut(s)	101
BsgI	GTGCAG	2 cut(s)	116, 174
Bsh1236I	CGCG	2 cut(s)	609, 1239
Bsh1285I	CGRYCG	2 cut(s)	241, 1079
BshFI	GGCC	6 cut(s)	43, 212, 236, 240, 308, 323
BshNI	GGYRCC	1 cut(s)	1152
BshVI	ATCGAT	1 cut(s)	342
BsiEI	CGRYCG	2 cut(s)	241, 1079
BsiHKCI	CYCGRG	1 cut(s)	612
BsiSI	CCGG	2 cut(s)	237, 411
BslFI	GGGAC	2 cut(s)	1153, 1248
BslI	CCNNNNNNNGG	4 cut(s)	236, 378, 1163, 1256
BsmAI	GTCTC	4 cut(s)	47, 284, 609, 718
BsmBI	CGTCTC	1 cut(s)	284
BsmFI	GGGAC	2 cut(s)	1153, 1248
BsmI	GAATGC	2 cut(s)	1035, 1318
BsnI	GGCC	6 cut(s)	43, 212, 236, 240, 308, 323
Bso31I	GGTCTC	1 cut(s)	609
BsoBI	CYCGRG	1 cut(s)	612
Bsp1286I	GDGCHC	2 cut(s)	222, 1157
Bsp143I	GATC	5 cut(s)	447, 679, 880, 997, 1076
BspACI	CCGC	9 cut(s)	5, 47, 50, 241, 299, 414, 465, 975, 1026
BspANI	GGCC	6 cut(s)	43, 212, 236, 240, 308, 323
BspDI	ATCGAT	1 cut(s)	342
BspFNI	CGCG	2 cut(s)	609, 1239
BspLI	GGNNCC	2 cut(s)	307, 1154
BspPI	GGATC	1 cut(s)	1005
BspQI	GCTCTTC	1 cut(s)	528
BspT107I	GGYRCC	1 cut(s)	1152
BspTNI	GGTCTC	1 cut(s)	609
BsrDI	GCAATG	1 cut(s)	301
BsrFI	RCCGGY	1 cut(s)	236
BsrI	ACTGG	2 cut(s)	117, 700
BssAI	RCCGGY	1 cut(s)	236
BssECI	CCNNGG	2 cut(s)	59, 623
BssMI	GATC	5 cut(s)	447, 679, 880, 997, 1076
BssNAI	GTATAC	2 cut(s)	658, 813
BssSI	CACGAG	1 cut(s)	555
Bst1107I	GTATAC	2 cut(s)	658, 813
Bst2BI	CACGAG	1 cut(s)	555
Bst2UI	CCWGG	1 cut(s)	945
Bst4CI	ACNGT	4 cut(s)	34, 167, 400, 709
Bst6I	CTCTTC	1 cut(s)	528
BstAPI	GCANNNNNTGC	2 cut(s)	336, 368
BstBAI	YACGTR	1 cut(s)	866
BstC8I	GCNNGC	4 cut(s)	45, 238, 856, 1030
BstDEI	CTNAG	1 cut(s)	502
BstF5I	GGATG	1 cut(s)	265
BstFNI	CGCG	2 cut(s)	609, 1239
BstHHI	GCGC	2 cut(s)	611, 1241
BstKTI	GATC	5 cut(s)	450, 682, 883, 1000, 1079
BstMAI	GTCTC	4 cut(s)	47, 284, 609, 718
BstMBI	GATC	5 cut(s)	447, 679, 880, 997, 1076
BstMCI	CGRYCG	2 cut(s)	241, 1079
BstMWI	GCNNNNNNNGC	6 cut(s)	305, 336, 368, 860, 983, 1324
BstNI	CCWGG	1 cut(s)	945
BstNSI	RCATGY	2 cut(s)	184, 188
BstSCI	CCNGG	1 cut(s)	943
BstSFI	CTRYAG	1 cut(s)	771
BstSLI	GKGCMC	2 cut(s)	222, 1157
BstUI	CGCG	2 cut(s)	609, 1239
BstV1I	GCAGC	7 cut(s)	109, 342, 751, 989, 1019, 1117, 1173
BstX2I	RGATCY	1 cut(s)	997
BstYI	RGATCY	1 cut(s)	997
BstZ17I	GTATAC	2 cut(s)	658, 813
BstZI	CGGCCG	1 cut(s)	238
Bsu15I	ATCGAT	1 cut(s)	342
BsuRI	GGCC	6 cut(s)	43, 212, 236, 240, 308, 323
BsuTUI	ATCGAT	1 cut(s)	342
BtsCI	GGATG	1 cut(s)	265
BtsI	GCAGTG	1 cut(s)	366
BtsIMutI	CAGTG	4 cut(s)	22, 39, 366, 693
Cac8I	GCNNGC	4 cut(s)	45, 238, 856, 1030
CfoI	GCGC	2 cut(s)	611, 1241
Cfr10I	RCCGGY	1 cut(s)	236
Cfr13I	GGNCC	5 cut(s)	211, 306, 322, 565, 918
ClaI	ATCGAT	1 cut(s)	342
CseI	GACGC	3 cut(s)	206, 1097, 1245
CsiI	ACCWGGT	1 cut(s)	943
Csp6I	GTAC	2 cut(s)	443, 795
CviAII	CATG	9 cut(s)	85, 181, 185, 540, 839, 1136, 1145, 1231, 1270
CviQI	GTAC	2 cut(s)	443, 795
DdeI	CTNAG	1 cut(s)	502
DpnI	GATC	5 cut(s)	449, 681, 882, 999, 1078
DpnII	GATC	5 cut(s)	447, 679, 880, 997, 1076
DraI	TTTAAA	1 cut(s)	459
DraIII	CACNNNGTG	1 cut(s)	482
DrdI	GACNNNNNNGTC	1 cut(s)	185
DseDI	GACNNNNNNGTC	1 cut(s)	185
EaeI	YGGCCR	2 cut(s)	234, 238
EagI	CGGCCG	1 cut(s)	238
Eam1104I	CTCTTC	1 cut(s)	528
EarI	CTCTTC	1 cut(s)	528
EciI	GGCGGA	1 cut(s)	65
EclXI	CGGCCG	1 cut(s)	238
Eco31I	GGTCTC	1 cut(s)	609
Eco32I	GATATC	1 cut(s)	420
Eco47I	GGWCC	2 cut(s)	565, 918
Eco52I	CGGCCG	1 cut(s)	238
Eco57I	CTGAAG	2 cut(s)	266, 1085
Eco72I	CACGTG	1 cut(s)	866
Eco88I	CYCGRG	1 cut(s)	612
EcoO109I	RGGNCCY	2 cut(s)	211, 306
EcoRI	GAATTC	1 cut(s)	1245
EcoRII	CCWGG	1 cut(s)	943
EcoRV	GATATC	1 cut(s)	420
EcoT22I	ATGCAT	1 cut(s)	186
Esp3I	CGTCTC	1 cut(s)	284
FaeI	CATG	9 cut(s)	88, 184, 188, 543, 842, 1139, 1148, 1234, 1273
FaqI	GGGAC	2 cut(s)	1153, 1248
FatI	CATG	9 cut(s)	84, 180, 184, 539, 838, 1135, 1144, 1230, 1269
FauI	CCCGC	1 cut(s)	407
FauNDI	CATATG	1 cut(s)	1329
FbaI	TGATCA	1 cut(s)	880
FblI	GTMKAC	4 cut(s)	29, 657, 764, 812
FokI	GGATG	1 cut(s)	272
FseI	GGCCGGCC	1 cut(s)	240
FspBI	CTAG	3 cut(s)	732, 872, 1173
GlaI	GCGC	2 cut(s)	610, 1240
GsaI	CCCAGC	1 cut(s)	105
HaeIII	GGCC	6 cut(s)	43, 212, 236, 240, 308, 323
HapII	CCGG	2 cut(s)	237, 411
HgaI	GACGC	3 cut(s)	206, 1097, 1245
HhaI	GCGC	2 cut(s)	611, 1241
Hin1II	CATG	9 cut(s)	88, 184, 188, 543, 842, 1139, 1148, 1234, 1273
Hin6I	GCGC	2 cut(s)	609, 1239
HinP1I	GCGC	2 cut(s)	609, 1239
HincII	GTYRAC	3 cut(s)	10, 30, 765
HindII	GTYRAC	3 cut(s)	10, 30, 765
HinfI	GANTC	2 cut(s)	26, 1141
HpaII	CCGG	2 cut(s)	237, 411
HphI	GGTGA	2 cut(s)	49, 638
Hpy166II	GTNNAC	8 cut(s)	10, 30, 658, 765, 813, 869, 910, 1182
Hpy188I	TCNGA	3 cut(s)	547, 627, 971
Hpy188III	TCNNGA	9 cut(s)	79, 190, 281, 379, 563, 614, 751, 884, 1094
Hpy8I	GTNNAC	8 cut(s)	10, 30, 658, 765, 813, 869, 910, 1182
HpyAV	CCTTC	5 cut(s)	187, 265, 909, 1250, 1255
HpyCH4III	ACNGT	4 cut(s)	34, 167, 400, 709
HpyCH4IV	ACGT	3 cut(s)	12, 865, 1337
HpyF10VI	GCNNNNNNNGC	6 cut(s)	305, 336, 368, 860, 983, 1324
HpyF3I	CTNAG	1 cut(s)	502
HpySE526I	ACGT	3 cut(s)	12, 865, 1337
Hsp92II	CATG	9 cut(s)	88, 184, 188, 543, 842, 1139, 1148, 1234, 1273
HspAI	GCGC	2 cut(s)	609, 1239
KroI	GCCGGC	1 cut(s)	236
KroNI	GCCGGC	1 cut(s)	238
Ksp22I	TGATCA	1 cut(s)	880
Kzo9I	GATC	5 cut(s)	447, 679, 880, 997, 1076
LguI	GCTCTTC	1 cut(s)	528
LmnI	GCTCC	1 cut(s)	736
Lsp1109I	GCAGC	7 cut(s)	109, 342, 751, 989, 1019, 1117, 1173
LweI	GCATC	4 cut(s)	136, 348, 1189, 1317
MabI	ACCWGGT	1 cut(s)	943
MaeI	CTAG	3 cut(s)	732, 872, 1173
MaeII	ACGT	3 cut(s)	12, 865, 1337
MaeIII	GTNAC	1 cut(s)	947
MalI	GATC	5 cut(s)	449, 681, 882, 999, 1078
MboI	GATC	5 cut(s)	447, 679, 880, 997, 1076
MboII	GAAGA	4 cut(s)	414, 515, 791, 794
MflI	RGATCY	1 cut(s)	997
MhlI	GDGCHC	2 cut(s)	222, 1157
MluCI	AATT	4 cut(s)	169, 893, 1245, 1288
MlyI	GAGTC	2 cut(s)	35, 1135
Mph1103I	ATGCAT	1 cut(s)	186
MroNI	GCCGGC	1 cut(s)	236
MseI	TTAA	1 cut(s)	458
MspA1I	CMGCKG	1 cut(s)	47
MspI	CCGG	2 cut(s)	237, 411
MspR9I	CCNGG	1 cut(s)	945
Mva1269I	GAATGC	2 cut(s)	1035, 1318
MvaI	CCWGG	1 cut(s)	945
MvnI	CGCG	2 cut(s)	609, 1239
MwoI	GCNNNNNNNGC	6 cut(s)	305, 336, 368, 860, 983, 1324
NaeI	GCCGGC	1 cut(s)	238
NdeI	CATATG	1 cut(s)	1329
NdeII	GATC	5 cut(s)	447, 679, 880, 997, 1076
NgoMIV	GCCGGC	1 cut(s)	236
NlaIII	CATG	9 cut(s)	88, 184, 188, 543, 842, 1139, 1148, 1234, 1273
NlaIV	GGNNCC	2 cut(s)	307, 1154
NmeAIII	GCCGAG	3 cut(s)	40, 183, 1303
NsiI	ATGCAT	1 cut(s)	186
NspI	RCATGY	2 cut(s)	184, 188
PaeR7I	CTCGAG	1 cut(s)	612
PciSI	GCTCTTC	1 cut(s)	528
PctI	GAATGC	2 cut(s)	1035, 1318
PdiI	GCCGGC	1 cut(s)	238
Ple19I	CGATCG	1 cut(s)	1079
PleI	GAGTC	2 cut(s)	34, 1135
PmaCI	CACGTG	1 cut(s)	866
PmlI	CACGTG	1 cut(s)	866
PpsI	GAGTC	2 cut(s)	34, 1135
Ppu21I	YACGTR	1 cut(s)	866
PsiI	TTATAA	1 cut(s)	533
Psp6I	CCWGG	1 cut(s)	943
PspCI	CACGTG	1 cut(s)	866
PspFI	CCCAGC	1 cut(s)	101
PspGI	CCWGG	1 cut(s)	943
PspN4I	GGNNCC	2 cut(s)	307, 1154
PspPI	GGNCC	5 cut(s)	211, 306, 322, 565, 918
PsrI	GAACNNNNNNTAC	2 cut(s)	702, 734
PsuI	RGATCY	1 cut(s)	997
PvuI	CGATCG	1 cut(s)	1079
RigI	GGCCGGCC	1 cut(s)	240
RsaI	GTAC	2 cut(s)	444, 796
RsaNI	GTAC	2 cut(s)	443, 795
SalI	GTCGAC	2 cut(s)	28, 763
SapI	GCTCTTC	1 cut(s)	528
SaqAI	TTAA	1 cut(s)	458
Sau3AI	GATC	5 cut(s)	447, 679, 880, 997, 1076
Sau96I	GGNCC	5 cut(s)	211, 306, 322, 565, 918
ScaI	AGTACT	1 cut(s)	796
SchI	GAGTC	2 cut(s)	35, 1135
ScrFI	CCNGG	1 cut(s)	945
SduI	GDGCHC	2 cut(s)	222, 1157
SexAI	ACCWGGT	1 cut(s)	943
SfaNI	GCATC	4 cut(s)	136, 348, 1189, 1317
SfcI	CTRYAG	1 cut(s)	771
Sfr274I	CTCGAG	1 cut(s)	612
SinI	GGWCC	2 cut(s)	565, 918
SlaI	CTCGAG	1 cut(s)	612
SmlI	CTYRAG	1 cut(s)	612
SmoI	CTYRAG	1 cut(s)	612
Sse9I	AATT	4 cut(s)	169, 893, 1245, 1288
SsiI	CCGC	9 cut(s)	5, 47, 50, 241, 299, 414, 465, 975, 1026
SspMI	CTAG	3 cut(s)	732, 872, 1173
StyD4I	CCNGG	1 cut(s)	943
TaaI	ACNGT	4 cut(s)	34, 167, 400, 709
TaiI	ACGT	3 cut(s)	15, 868, 1340
TasI	AATT	4 cut(s)	169, 893, 1245, 1288
TatI	WGTACW	1 cut(s)	794
TauI	GCSGC	4 cut(s)	50, 243, 977, 1028
Tru1I	TTAA	1 cut(s)	458
Tru9I	TTAA	1 cut(s)	458
TscAI	CASTG	4 cut(s)	22, 39, 373, 700
TseI	GCWGC	7 cut(s)	97, 330, 739, 977, 1032, 1105, 1186
TspDTI	ATGAA	3 cut(s)	714, 1219, 1346
TspGWI	ACGGA	1 cut(s)	927
TspRI	CASTG	4 cut(s)	22, 39, 373, 700
VpaK11BI	GGWCC	2 cut(s)	565, 918
XapI	RAATTY	1 cut(s)	1245
XceI	RCATGY	2 cut(s)	184, 188
XhoI	CTCGAG	1 cut(s)	612
XmiI	GTMKAC	4 cut(s)	29, 657, 764, 812
XspI	CTAG	3 cut(s)	732, 872, 1173
ZrmI	AGTACT	1 cut(s)	796
Zsp2I	ATGCAT	1 cut(s)	186

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.