Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Forward (+)

36545638 .. 36561483

Gene Structure 15846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00111800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1314 bp

ATGTCGATCAACGTGAGAGTGCGGGAGTCAAGGGTGGTGAAGCCATCAGAGGAGACACCTCGGCATGCACTGTGGATTTCCAACTTGGACGTGGTGATATCCAACACTCACATGGGCAGCGTTTACTTCTACCGGAGGCAAACCGGTGTCCTTGATGATAACTTCTTCGAGCCGCGCGTGCTAAAGGACGCACTCAGCAAGGTCCTCGTGCCCTTCTACCCCATAGCCGGTCGACTGACGCAAAACGAGGATGGTCGGCTCCAAATCGATTGCAATGCGGAGGGCGTGTTGTTTGTTGAGGCGGAGAGCAACTCCGTCGTGGATGACTTTGGGGACTTTGCTCCCACCCTCGAGTTCCGGCGGCTCATCCCCACCGTTGATTATACCGCTGGGATATCCTCTTATCCCCTCTTGGTCTTACAGGTTACATACTTCAAATGTGGTGGAGTGTCACTTGGTGTTGGCATGGAACACCGGGTAGCAGATGGATATTCTGGTCTCCATTTCATAAATACATGGTCTGATATCGCTCGTGGCCTCGACCTCACAATTCCACCATTCATCGACCGCACATTACTACGTGCTCGAGATCCGCCCCGGCCTGCATTCCCCCACATTGAATACCAACCCGGTCCGTCTATGAAAACTCCTCTTGATGCTGCTCAGATGACATCAACAATGGTCTCCATTTTCAAGCTGACACCAGACCAGCTCAACACCTTGAAAGCCAAGTTTAAAAAAGATGGGAACAACGCGATCAAGTTCAGCTTATATGAAATGTTGGCAGGTCATATATGGCGATGTGCATGCAAGGCACGCCGACTCCCCGATGATCAAGAGACCAAACTGCATATCGCCACTGATGGAAGGTCCAGACTGAAGCCTCCACTCCCTCCGGGTTACTTTGGCAATGTGATTTTCTCAGCTGGGCCATTCGCTACAGCAGGGGATCTCCAATCAAAACCGATATGGTATGCTTCAAGCTGTATACAAAATACTTTGGCACGTATGGACGATGAGTATCTTAGATCAGCAATCGACTATCTTGAGCTTCAGCCGGATCTTTCGGCACTTGTTCGCGGGGCTCGTAGTTTTCGCTGCCCAAAAATGGGGATTACTAGTTGGCTTAGGCTGCCGATCCATGATGCTGATTTCGGCTGGGGTCGACCCATGTTCATGGGACCTGGAGGGATTGCATTTGAAGGTTTGTGCTTCATTTTACCGAGTGCAAGTAAAGACGGGAGCTTATCAGTGGCCATTTCACTCCAATCTGAACATATGAAATCATTTTCAAAGTTCTTATATGACATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

437

Amino Acids

48.82

Weight (kDa)

7.62

Isoelectric Point (pI)

41.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	4 - 432	6.1e-113	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	776
AccI	GTMKAC	3 cut(s)	232, 988, 1165
AccII	CGCG	4 cut(s)	175, 177, 755, 1080
AciI	CCGC	9 cut(s)	22, 173, 278, 302, 361, 387, 568, 593, 1080
AclWI	GGATC	4 cut(s)	584, 957, 1068, 1132
AcoI	YGGCCR	1 cut(s)	1254
AcuI	CTGAAG	2 cut(s)	899, 1037
AdeI	CACNNNGTG	1 cut(s)	458
AfiI	CCNNNNNNNGG	3 cut(s)	227, 1108, 1109
AgeI	ACCGGT	1 cut(s)	143
AgsI	TTSAA	7 cut(s)	436, 620, 694, 724, 981, 1202, 1293
AhlI	ACTAGT	1 cut(s)	1118
AjiI	CACGTC	1 cut(s)	91
AjnI	CCWGG	1 cut(s)	1183
AluBI	AGCT	7 cut(s)	697, 712, 768, 926, 984, 1051, 1245
AluI	AGCT	7 cut(s)	697, 712, 768, 926, 984, 1051, 1245
Alw21I	GWGCWC	1 cut(s)	586
Alw26I	GTCTC	4 cut(s)	47, 503, 688, 833
AlwI	GGATC	4 cut(s)	584, 957, 1068, 1132
Ama87I	CYCGRG	2 cut(s)	350, 585
AoxI	GGCC	4 cut(s)	535, 599, 929, 1254
ApeKI	GCWGC	4 cut(s)	117, 659, 1098, 1132
AsiGI	ACCGGT	1 cut(s)	143
AspLEI	GCGC	1 cut(s)	177
AspS9I	GGNCC	5 cut(s)	202, 632, 870, 929, 1181
AsuC2I	CCSGG	4 cut(s)	476, 598, 630, 897
AsuHPI	GGTGA	2 cut(s)	49, 106
AvaI	CYCGRG	2 cut(s)	350, 585
AvaII	GGWCC	4 cut(s)	202, 632, 870, 1181
BaeGI	GKGCMC	1 cut(s)	213
BalI	TGGCCA	1 cut(s)	1256
BanII	GRGCYC	1 cut(s)	1087
BauI	CACGAG	2 cut(s)	206, 531
Bbv12I	GWGCWC	1 cut(s)	586
BbvI	GCAGC	4 cut(s)	129, 646, 1085, 1119
BccI	CCATC	5 cut(s)	52, 245, 479, 737, 857
BcgI	CGANNNNNNTGC	8 cut(s)	187, 221, 257, 291, 298, 332, 789, 823
BciT130I	CCWGG	1 cut(s)	1185
BclI	TGATCA	1 cut(s)	832
BcnI	CCSGG	4 cut(s)	476, 598, 630, 897
BcoDI	GTCTC	4 cut(s)	47, 503, 688, 833
BcuI	ACTAGT	1 cut(s)	1118
BfaI	CTAG	1 cut(s)	1119
BfmI	CTRYAG	1 cut(s)	939
BfuAI	ACCTGC	1 cut(s)	776
BisI	GCNGC	6 cut(s)	118, 173, 362, 660, 1099, 1133
BlsI	GCNGC	6 cut(s)	119, 174, 363, 661, 1100, 1134
Bme1390I	CCNGG	5 cut(s)	476, 598, 630, 897, 1185
Bme18I	GGWCC	4 cut(s)	202, 632, 870, 1181
BmeT110I	CYCGRG	2 cut(s)	350, 585
BmgBI	CACGTC	1 cut(s)	91
BmgT120I	GGNCC	5 cut(s)	202, 632, 870, 929, 1181
BmiI	GGNNCC	2 cut(s)	260, 1182
BmrFI	CCNGG	5 cut(s)	476, 598, 630, 897, 1185
BmsI	GCATC	2 cut(s)	646, 1135
BplI	GAGNNNNNCTC	2 cut(s)	296, 328
BpmI	CTGGAG	1 cut(s)	1206
Bpu10I	CCTNAGC	1 cut(s)	1127
BpuEI	CTTGAG	1 cut(s)	1067
BpuMI	CCSGG	4 cut(s)	476, 598, 630, 897
Bsa29I	ATCGAT	1 cut(s)	267
BsaAI	YACGTR	2 cut(s)	581, 1007
BsaBI	GATNNNNATC	1 cut(s)	1020
BsaI	GGTCTC	3 cut(s)	503, 688, 833
BsaJI	CCNNGG	2 cut(s)	59, 596
BsaWI	WCCGGW	2 cut(s)	132, 143
BsaXI	ACNNNNNCTCC	4 cut(s)	272, 302, 807, 837
Bsc4I	CCNNNNNNNGG	3 cut(s)	227, 1108, 1109
Bse118I	RCCGGY	2 cut(s)	143, 227
Bse3DI	GCAATG	2 cut(s)	280, 916
Bse8I	GATNNNNATC	1 cut(s)	1020
BseBI	CCWGG	1 cut(s)	1185
BseCI	ATCGAT	1 cut(s)	267
BseDI	CCNNGG	2 cut(s)	59, 596
BseGI	GGATG	3 cut(s)	256, 328, 366
BseJI	GATNNNNATC	1 cut(s)	1020
BseLI	CCNNNNNNNGG	3 cut(s)	227, 1108, 1109
BseMI	GCAATG	2 cut(s)	280, 916
BseMII	CTCAG	3 cut(s)	208, 677, 936
BseRI	GAGGAG	2 cut(s)	65, 639
BseSI	GKGCMC	1 cut(s)	213
BseXI	GCAGC	4 cut(s)	129, 646, 1085, 1119
BseYI	CCCAGC	3 cut(s)	389, 926, 1158
Bsh1236I	CGCG	4 cut(s)	175, 177, 755, 1080
Bsh1285I	CGRYCG	2 cut(s)	232, 568
BshFI	GGCC	4 cut(s)	537, 601, 931, 1256
BshTI	ACCGGT	1 cut(s)	143
BshVI	ATCGAT	1 cut(s)	267
BsiEI	CGRYCG	2 cut(s)	232, 568
BsiHKAI	GWGCWC	1 cut(s)	586
BsiHKCI	CYCGRG	2 cut(s)	350, 585
BsiSI	CCGG	9 cut(s)	133, 144, 228, 358, 475, 598, 630, 896, 1058
BslFI	GGGAC	2 cut(s)	347, 1194
BslI	CCNNNNNNNGG	3 cut(s)	227, 1108, 1109
BsmAI	GTCTC	4 cut(s)	47, 503, 688, 833
BsmFI	GGGAC	2 cut(s)	347, 1194
BsmI	GAATGC	1 cut(s)	605
BsnI	GGCC	4 cut(s)	537, 601, 931, 1256
Bso31I	GGTCTC	3 cut(s)	503, 688, 833
BsoBI	CYCGRG	2 cut(s)	350, 585
Bsp1286I	GDGCHC	3 cut(s)	213, 586, 1087
Bsp143I	GATC	8 cut(s)	6, 589, 756, 832, 949, 1028, 1060, 1137
BspACI	CCGC	9 cut(s)	22, 173, 278, 302, 361, 387, 568, 593, 1080
BspANI	GGCC	4 cut(s)	537, 601, 931, 1256
BspCNI	CTCAG	3 cut(s)	207, 676, 935
BspDI	ATCGAT	1 cut(s)	267
BspFNI	CGCG	4 cut(s)	175, 177, 755, 1080
BspLI	GGNNCC	2 cut(s)	260, 1182
BspMI	ACCTGC	1 cut(s)	776
BspPI	GGATC	4 cut(s)	584, 957, 1068, 1132
BspTNI	GGTCTC	3 cut(s)	503, 688, 833
BsrDI	GCAATG	2 cut(s)	280, 916
BsrFI	RCCGGY	2 cut(s)	143, 227
BssAI	RCCGGY	2 cut(s)	143, 227
BssECI	CCNNGG	2 cut(s)	59, 596
BssMI	GATC	8 cut(s)	6, 589, 756, 832, 949, 1028, 1060, 1137
BssNAI	GTATAC	1 cut(s)	989
BssSI	CACGAG	2 cut(s)	206, 531
Bst1107I	GTATAC	1 cut(s)	989
Bst2BI	CACGAG	2 cut(s)	206, 531
Bst2UI	CCWGG	1 cut(s)	1185
Bst4CI	ACNGT	2 cut(s)	72, 376
BstBAI	YACGTR	2 cut(s)	581, 1007
BstC8I	GCNNGC	5 cut(s)	66, 179, 603, 808, 817
BstDEI	CTNAG	5 cut(s)	194, 663, 922, 1025, 1127
BstF5I	GGATG	3 cut(s)	256, 328, 366
BstFNI	CGCG	4 cut(s)	175, 177, 755, 1080
BstHHI	GCGC	1 cut(s)	177
BstKTI	GATC	8 cut(s)	9, 592, 759, 835, 952, 1031, 1063, 1140
BstMAI	GTCTC	4 cut(s)	47, 503, 688, 833
BstMBI	GATC	8 cut(s)	6, 589, 756, 832, 949, 1028, 1060, 1137
BstMCI	CGRYCG	2 cut(s)	232, 568
BstMWI	GCNNNNNNNGC	4 cut(s)	178, 812, 816, 1132
BstNI	CCWGG	1 cut(s)	1185
BstNSI	RCATGY	2 cut(s)	68, 810
BstSCI	CCNGG	5 cut(s)	474, 596, 628, 895, 1183
BstSFI	CTRYAG	1 cut(s)	939
BstSLI	GKGCMC	1 cut(s)	213
BstUI	CGCG	4 cut(s)	175, 177, 755, 1080
BstV1I	GCAGC	4 cut(s)	129, 646, 1085, 1119
BstX2I	RGATCY	3 cut(s)	589, 949, 1060
BstXI	CCANNNNNNTGG	1 cut(s)	1177
BstYI	RGATCY	3 cut(s)	589, 949, 1060
BstZ17I	GTATAC	1 cut(s)	989
Bsu15I	ATCGAT	1 cut(s)	267
BsuRI	GGCC	4 cut(s)	537, 601, 931, 1256
BsuTUI	ATCGAT	1 cut(s)	267
BtgZI	GCGATG	1 cut(s)	814
BtrI	CACGTC	1 cut(s)	91
BtsCI	GGATG	3 cut(s)	256, 328, 366
BtsIMutI	CAGTG	3 cut(s)	68, 858, 1257
BveI	ACCTGC	1 cut(s)	776
Cac8I	GCNNGC	5 cut(s)	66, 179, 603, 808, 817
CfoI	GCGC	1 cut(s)	177
Cfr10I	RCCGGY	2 cut(s)	143, 227
Cfr13I	GGNCC	5 cut(s)	202, 632, 870, 929, 1181
ClaI	ATCGAT	1 cut(s)	267
CpoI	CGGWCCG	1 cut(s)	632
CseI	GACGC	2 cut(s)	197, 247
CspAI	ACCGGT	1 cut(s)	143
CspCI	CAANNNNNGTGG	2 cut(s)	424, 459
CspI	CGGWCCG	1 cut(s)	632
CviAII	CATG	8 cut(s)	65, 112, 466, 516, 807, 1142, 1171, 1177
DdeI	CTNAG	5 cut(s)	194, 663, 922, 1025, 1127
DpnI	GATC	8 cut(s)	8, 591, 758, 834, 951, 1030, 1062, 1139
DpnII	GATC	8 cut(s)	6, 589, 756, 832, 949, 1028, 1060, 1137
DraI	TTTAAA	1 cut(s)	736
DraIII	CACNNNGTG	1 cut(s)	458
EaeI	YGGCCR	1 cut(s)	1254
EciI	GGCGGA	2 cut(s)	317, 582
Eco24I	GRGCYC	1 cut(s)	1087
Eco31I	GGTCTC	3 cut(s)	503, 688, 833
Eco32I	GATATC	3 cut(s)	99, 396, 526
Eco47I	GGWCC	4 cut(s)	202, 632, 870, 1181
Eco57I	CTGAAG	2 cut(s)	899, 1037
Eco88I	CYCGRG	2 cut(s)	350, 585
EcoO109I	RGGNCCY	2 cut(s)	202, 1181
EcoRII	CCWGG	1 cut(s)	1183
EcoRV	GATATC	3 cut(s)	99, 396, 526
EcoT38I	GRGCYC	1 cut(s)	1087
FaeI	CATG	8 cut(s)	68, 115, 469, 519, 810, 1145, 1174, 1180
FalI	AAGNNNNNCTT	2 cut(s)	752, 784
FaqI	GGGAC	2 cut(s)	347, 1194
FatI	CATG	8 cut(s)	64, 111, 465, 515, 806, 1141, 1170, 1176
FauI	CCCGC	2 cut(s)	15, 1073
FauNDI	CATATG	1 cut(s)	1278
FbaI	TGATCA	1 cut(s)	832
FblI	GTMKAC	3 cut(s)	232, 988, 1165
Fnu4HI	GCNGC	6 cut(s)	118, 173, 362, 660, 1099, 1133
FokI	GGATG	3 cut(s)	263, 335, 353
FriOI	GRGCYC	1 cut(s)	1087
Fsp4HI	GCNGC	6 cut(s)	118, 173, 362, 660, 1099, 1133
FspBI	CTAG	1 cut(s)	1119
GlaI	GCGC	1 cut(s)	176
GluI	GCNGC	6 cut(s)	118, 173, 362, 660, 1099, 1133
GsaI	CCCAGC	3 cut(s)	393, 930, 1162
GsuI	CTGGAG	1 cut(s)	1206
HaeIII	GGCC	4 cut(s)	537, 601, 931, 1256
HapII	CCGG	9 cut(s)	133, 144, 228, 358, 475, 598, 630, 896, 1058
HgaI	GACGC	2 cut(s)	197, 247
HhaI	GCGC	1 cut(s)	177
Hin1II	CATG	8 cut(s)	68, 115, 469, 519, 810, 1145, 1174, 1180
Hin6I	GCGC	1 cut(s)	175
HinP1I	GCGC	1 cut(s)	175
HincII	GTYRAC	2 cut(s)	233, 1166
HindII	GTYRAC	2 cut(s)	233, 1166
HinfI	GANTC	2 cut(s)	26, 822
HpaII	CCGG	9 cut(s)	133, 144, 228, 358, 475, 598, 630, 896, 1058
HphI	GGTGA	2 cut(s)	49, 106
Hpy166II	GTNNAC	4 cut(s)	124, 233, 989, 1166
Hpy188I	TCNGA	4 cut(s)	49, 523, 666, 1273
Hpy188III	TCNNGA	5 cut(s)	587, 653, 836, 873, 1046
Hpy8I	GTNNAC	4 cut(s)	124, 233, 989, 1166
Hpy99I	CGWCG	1 cut(s)	320
HpyAV	CCTTC	3 cut(s)	223, 861, 1196
HpyCH4III	ACNGT	2 cut(s)	72, 376
HpyCH4IV	ACGT	4 cut(s)	12, 90, 580, 1006
HpyCH4V	TGCA	8 cut(s)	68, 273, 605, 806, 810, 850, 1196, 1229
HpyF10VI	GCNNNNNNNGC	4 cut(s)	178, 812, 816, 1132
HpyF3I	CTNAG	5 cut(s)	194, 663, 922, 1025, 1127
HpySE526I	ACGT	4 cut(s)	12, 90, 580, 1006
Hsp92II	CATG	8 cut(s)	68, 115, 469, 519, 810, 1145, 1174, 1180
HspAI	GCGC	1 cut(s)	175
Ksp22I	TGATCA	1 cut(s)	832
Kzo9I	GATC	8 cut(s)	6, 589, 756, 832, 949, 1028, 1060, 1137
LmnI	GCTCC	3 cut(s)	264, 346, 1242
Lsp1109I	GCAGC	4 cut(s)	129, 646, 1085, 1119
LweI	GCATC	2 cut(s)	646, 1135
MaeI	CTAG	1 cut(s)	1119
MaeII	ACGT	4 cut(s)	12, 90, 580, 1006
MaeIII	GTNAC	3 cut(s)	424, 450, 899
MalI	GATC	8 cut(s)	8, 591, 758, 834, 951, 1030, 1062, 1139
MboI	GATC	8 cut(s)	6, 589, 756, 832, 949, 1028, 1060, 1137
MboII	GAAGA	1 cut(s)	157
MflI	RGATCY	3 cut(s)	589, 949, 1060
MhlI	GDGCHC	3 cut(s)	213, 586, 1087
MlsI	TGGCCA	1 cut(s)	1256
MluCI	AATT	1 cut(s)	549
MluNI	TGGCCA	1 cut(s)	1256
MlyI	GAGTC	2 cut(s)	35, 816
MmeI	TCCRAC	2 cut(s)	105, 126
Mox20I	TGGCCA	1 cut(s)	1256
MscI	TGGCCA	1 cut(s)	1256
MseI	TTAA	1 cut(s)	735
MslI	CAYNNNNRTG	2 cut(s)	110, 1175
Msp20I	TGGCCA	1 cut(s)	1256
MspA1I	CMGCKG	2 cut(s)	389, 926
MspI	CCGG	9 cut(s)	133, 144, 228, 358, 475, 598, 630, 896, 1058
MspR9I	CCNGG	5 cut(s)	476, 598, 630, 897, 1185
Mva1269I	GAATGC	1 cut(s)	605
MvaI	CCWGG	1 cut(s)	1185
MvnI	CGCG	4 cut(s)	175, 177, 755, 1080
MwoI	GCNNNNNNNGC	4 cut(s)	178, 812, 816, 1132
NciI	CCSGG	4 cut(s)	476, 598, 630, 897
NdeI	CATATG	1 cut(s)	1278
NdeII	GATC	8 cut(s)	6, 589, 756, 832, 949, 1028, 1060, 1137
NlaIII	CATG	8 cut(s)	68, 115, 469, 519, 810, 1145, 1174, 1180
NlaIV	GGNNCC	2 cut(s)	260, 1182
NmeAIII	GCCGAG	1 cut(s)	40
NmuCI	GTSAC	1 cut(s)	450
NspI	RCATGY	2 cut(s)	68, 810
PaeI	GCATGC	2 cut(s)	68, 810
PaeR7I	CTCGAG	2 cut(s)	350, 585
PcsI	WCGNNNNNNNCGW	2 cut(s)	174, 1084
PctI	GAATGC	1 cut(s)	605
PinAI	ACCGGT	1 cut(s)	143
PkrI	GCNGC	6 cut(s)	119, 174, 363, 661, 1100, 1134
PleI	GAGTC	2 cut(s)	34, 816
PpsI	GAGTC	2 cut(s)	34, 816
Ppu21I	YACGTR	2 cut(s)	581, 1007
PpuMI	RGGWCCY	2 cut(s)	202, 1181
Psp5II	RGGWCCY	2 cut(s)	202, 1181
Psp6I	CCWGG	1 cut(s)	1183
PspFI	CCCAGC	3 cut(s)	389, 926, 1158
PspGI	CCWGG	1 cut(s)	1183
PspN4I	GGNNCC	2 cut(s)	260, 1182
PspPI	GGNCC	5 cut(s)	202, 632, 870, 929, 1181
PspPPI	RGGWCCY	2 cut(s)	202, 1181
PspXI	VCTCGAGB	1 cut(s)	350
PsuI	RGATCY	3 cut(s)	589, 949, 1060
PvuII	CAGCTG	1 cut(s)	926
RseI	CAYNNNNRTG	2 cut(s)	110, 1175
Rsr2I	CGGWCCG	1 cut(s)	632
RsrII	CGGWCCG	1 cut(s)	632
SalI	GTCGAC	2 cut(s)	231, 1164
SaqAI	TTAA	1 cut(s)	735
SatI	GCNGC	6 cut(s)	118, 173, 362, 660, 1099, 1133
Sau3AI	GATC	8 cut(s)	6, 589, 756, 832, 949, 1028, 1060, 1137
Sau96I	GGNCC	5 cut(s)	202, 632, 870, 929, 1181
SchI	GAGTC	2 cut(s)	35, 816
ScrFI	CCNGG	5 cut(s)	476, 598, 630, 897, 1185
SduI	GDGCHC	3 cut(s)	213, 586, 1087
SfaNI	GCATC	2 cut(s)	646, 1135
SfcI	CTRYAG	1 cut(s)	939
Sfr274I	CTCGAG	2 cut(s)	350, 585
SinI	GGWCC	4 cut(s)	202, 632, 870, 1181
SlaI	CTCGAG	2 cut(s)	350, 585
SmiMI	CAYNNNNRTG	2 cut(s)	110, 1175
SmlI	CTYRAG	3 cut(s)	350, 585, 1046
SmoI	CTYRAG	3 cut(s)	350, 585, 1046
SpeI	ACTAGT	1 cut(s)	1118
SphI	GCATGC	2 cut(s)	68, 810
Sse9I	AATT	1 cut(s)	549
SsiI	CCGC	9 cut(s)	22, 173, 278, 302, 361, 387, 568, 593, 1080
SspMI	CTAG	1 cut(s)	1119
StyD4I	CCNGG	5 cut(s)	474, 596, 628, 895, 1183
TaaI	ACNGT	2 cut(s)	72, 376
TaiI	ACGT	4 cut(s)	15, 93, 583, 1009
TasI	AATT	1 cut(s)	549
TauI	GCSGC	2 cut(s)	175, 364
Tru1I	TTAA	1 cut(s)	735
Tru9I	TTAA	1 cut(s)	735
TscAI	CASTG	3 cut(s)	75, 865, 1257
TseFI	GTSAC	1 cut(s)	450
TseI	GCWGC	4 cut(s)	117, 659, 1098, 1132
Tsp45I	GTSAC	1 cut(s)	450
TspDTI	ATGAA	7 cut(s)	496, 550, 656, 789, 1165, 1204, 1295
TspGWI	ACGGA	2 cut(s)	304, 624
TspRI	CASTG	3 cut(s)	75, 865, 1257
VpaK11BI	GGWCC	4 cut(s)	202, 632, 870, 1181
XceI	RCATGY	2 cut(s)	68, 810
XcmI	CCANNNNNNNNNTGG	2 cut(s)	88, 109
XhoI	CTCGAG	2 cut(s)	350, 585
XmiI	GTMKAC	3 cut(s)	232, 988, 1165
XspI	CTAG	1 cut(s)	1119

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.