Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Forward (+)

2827935 .. 2829293

Gene Structure 1359 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00002370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGAAGGTCGTCAACGTCCGTGTAAGGGAGTCAACGGTGGTGAGGCCAGCCTCGGAGACGCCTCGGCAGTCGCTGTGGATCTCAAACTTGGACATGATGATTGTGAACACTCACACTCCTAGTTTTTATATCTACAAGCCAAAAGCCGGTGCAGAGGATTATTTCTTTGACCCGCTCGTGTTGAAGAAAAGCCTTAGCAACGCCCTCGTGCCTTTCTACCCGTTGGCCGGGCGCCTGAAGCGAAGCAACAACGATGACAAGGACGAGAATTCTCGTATCGAAATCAATTGCAATGCGGACGGAGCCTTGTTTGTTGTGGCTGATAGCGACTCTTGCATCGATGACTTTGGCGATTTTGCGCCGACTCCCGAGTTTGGGAAGACTCTCATCCCTGCCGTTGATTATTCGGCAGGGATATCTTCTTTTCCCTTGTTGCTGATTCAGGTCACGTACTTGAAGTGTGGCGGAGTGGCACTTGGTATTGCCTTGGAACATGGCTCAGCAGATGGATTTTCTGCTCTCCACTTCGTAAATACATGGTCTGATATGGCTCGTGGTCTCGACCTCACAATTCCACCAGTCCTCGACAGAACATCCCTCCGTGCCCGAGACATACCTCAGCCTTTACAGCACCACACTCACCACATCGAATACCAACCTCCTAAGGAAGATGAGAACGGTGAGATCAAGGCCGAAACACAGGTCTCAGTATTCAAATTTACAAAGGAGCAACTCAACATCTTGAAAGCTAAGTCGACTACGACTGAGGAGGAAGATAATGGTAAGAACACTATACCAGTCATGTATACATCATATGAGGTGTTTTCAGGTCATGTATGGAGGTGTGCATGCAAGGCACGTGAACTTGATGATGATCAAGGGACCAAACTTTACGTTTCTGTAAATGGAAGGAACAGATTGCAACCCCCACTCCCACCTGGTTACTTTGGTAATGCAATCTTTGTAGCCGTGCCGACTGCGCTGGCGGGAGATCTCATATCAAAACCATTATGGTATGCTGCAAGCTGTATTCGCAATGCTCTAGTGCGAATGGACGATGAGTATCTTAGATCAACTCTCGACTATCTTGAGCTTCAGCCGCTTCGTGATCTGACAGCCGTTGCTCGTGGAGATCGTTATCGGAGCCCTAACCTTGGGATAACTAGTTGGGTTACGCTTCCTCTCTATGATGCTGATTTTGGGTCGGGTCGACCCTTTTTCATGGGGCGTGCTGGAATTCCTAGTGAAGGGAAGGCTTACATAACACCGAGTGCAAGTAATGATGGTAGCTTATCCATGGCCATTCATCTTCAATCTCAACATATGAAATCGTTTTCCAAGTTGGTTTACGACATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

452

Amino Acids

50.22

Weight (kDa)

5.74

Isoelectric Point (pI)

41.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	5 - 448	6e-106	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	231
AccBSI	CCGCTC	1 cut(s)	175
AccI	GTMKAC	3 cut(s)	755, 806, 1210
AciI	CCGC	5 cut(s)	173, 296, 465, 986, 1100
AclWI	GGATC	1 cut(s)	86
AcoI	YGGCCR	2 cut(s)	225, 1299
AcsI	RAATTY	3 cut(s)	268, 716, 1236
AcuI	CTGAAG	2 cut(s)	257, 1079
AcvI	CACGTG	1 cut(s)	860
AcyI	GRCGYC	2 cut(s)	59, 232
AdeI	CACNNNGTG	1 cut(s)	1271
AfaI	GTAC	1 cut(s)	452
AfiI	CCNNNNNNNGG	7 cut(s)	25, 146, 227, 374, 375, 1154, 1247
AgsI	TTSAA	5 cut(s)	184, 457, 715, 745, 1313
AhlI	ACTAGT	1 cut(s)	1163
AjnI	CCWGG	1 cut(s)	937
AluBI	AGCT	4 cut(s)	749, 1026, 1093, 1290
AluI	AGCT	4 cut(s)	749, 1026, 1093, 1290
Alw26I	GTCTC	4 cut(s)	50, 563, 603, 709
AlwI	GGATC	1 cut(s)	86
AlwNI	CAGNNNCTG	1 cut(s)	73
Ama87I	CYCGRG	2 cut(s)	368, 606
AoxI	GGCC	4 cut(s)	44, 225, 690, 1299
ApeKI	GCWGC	1 cut(s)	1019
ApoI	RAATTY	3 cut(s)	268, 716, 1236
ArsI	GACNNNNNNTTYG	2 cut(s)	687, 719
AspLEI	GCGC	3 cut(s)	234, 361, 982
AspS9I	GGNCC	1 cut(s)	882
AsuC2I	CCSGG	1 cut(s)	229
AsuHPI	GGTGA	3 cut(s)	52, 632, 692
AvaI	CYCGRG	2 cut(s)	368, 606
AvaII	GGWCC	1 cut(s)	882
AxyI	CCTNAGG	1 cut(s)	663
BaeGI	GKGCMC	1 cut(s)	607
BalI	TGGCCA	1 cut(s)	1301
BanI	GGYRCC	1 cut(s)	231
BanII	GRGCYC	1 cut(s)	1148
BauI	CACGAG	4 cut(s)	176, 206, 552, 1125
BbrPI	CACGTG	1 cut(s)	860
BbsI	GAAGAC	1 cut(s)	386
BbvCI	CCTCAGC	1 cut(s)	618
BbvI	GCAGC	1 cut(s)	1006
BccI	CCATC	2 cut(s)	500, 1277
BceAI	ACGGC	3 cut(s)	380, 953, 1103
BcgI	CGANNNNNNTGC	2 cut(s)	187, 221
BciT130I	CCWGG	1 cut(s)	939
BclI	TGATCA	1 cut(s)	874
BcnI	CCSGG	1 cut(s)	229
BcoDI	GTCTC	4 cut(s)	50, 563, 603, 709
BcuI	ACTAGT	1 cut(s)	1163
BfaI	CTAG	4 cut(s)	120, 1043, 1164, 1242
BfoI	RGCGCY	1 cut(s)	235
BglII	AGATCT	1 cut(s)	991
BisI	GCNGC	2 cut(s)	1020, 1100
BlpI	GCTNAGC	1 cut(s)	499
BlsI	GCNGC	2 cut(s)	1021, 1101
Bme1390I	CCNGG	2 cut(s)	229, 939
Bme18I	GGWCC	1 cut(s)	882
BmeT110I	CYCGRG	2 cut(s)	368, 606
BmgT120I	GGNCC	1 cut(s)	882
BmiI	GGNNCC	4 cut(s)	233, 304, 883, 1145
BmrFI	CCNGG	2 cut(s)	229, 939
BmsI	GCATC	2 cut(s)	345, 1180
BpiI	GAAGAC	1 cut(s)	386
Bpu10I	CCTNAGC	2 cut(s)	194, 618
Bpu1102I	GCTNAGC	1 cut(s)	499
BpuEI	CTTGAG	1 cut(s)	1109
BpuMI	CCSGG	1 cut(s)	229
Bsa29I	ATCGAT	1 cut(s)	339
BsaAI	YACGTR	2 cut(s)	450, 860
BsaBI	GATNNNNATC	3 cut(s)	873, 1062, 1137
BsaHI	GRCGYC	2 cut(s)	59, 232
BsaI	GGTCTC	2 cut(s)	563, 709
BsaJI	CCNNGG	5 cut(s)	51, 62, 486, 1153, 1296
BsaXI	ACNNNNNCTCC	4 cut(s)	100, 130, 915, 945
Bsc4I	CCNNNNNNNGG	7 cut(s)	25, 146, 227, 374, 375, 1154, 1247
Bse118I	RCCGGY	1 cut(s)	146
Bse1I	ACTGG	2 cut(s)	578, 797
Bse21I	CCTNAGG	1 cut(s)	663
Bse3DI	GCAATG	2 cut(s)	298, 1042
Bse8I	GATNNNNATC	3 cut(s)	873, 1062, 1137
BseBI	CCWGG	1 cut(s)	939
BseCI	ATCGAT	1 cut(s)	339
BseDI	CCNNGG	5 cut(s)	51, 62, 486, 1153, 1296
BseGI	GGATG	2 cut(s)	387, 593
BseJI	GATNNNNATC	3 cut(s)	873, 1062, 1137
BseLI	CCNNNNNNNGG	7 cut(s)	25, 146, 227, 374, 375, 1154, 1247
BseMI	GCAATG	2 cut(s)	298, 1042
BseMII	CTCAG	4 cut(s)	513, 632, 720, 756
BseNI	ACTGG	2 cut(s)	578, 797
BseRI	GAGGAG	1 cut(s)	782
BseSI	GKGCMC	1 cut(s)	607
BseXI	GCAGC	1 cut(s)	1006
BsgI	GTGCAG	1 cut(s)	171
BshFI	GGCC	4 cut(s)	46, 227, 692, 1301
BshNI	GGYRCC	1 cut(s)	231
BshVI	ATCGAT	1 cut(s)	339
BsiHKCI	CYCGRG	2 cut(s)	368, 606
BsiSI	CCGG	2 cut(s)	147, 228
BslFI	GGGAC	1 cut(s)	895
BslI	CCNNNNNNNGG	7 cut(s)	25, 146, 227, 374, 375, 1154, 1247
BsmAI	GTCTC	4 cut(s)	50, 563, 603, 709
BsmBI	CGTCTC	1 cut(s)	50
BsmFI	GGGAC	1 cut(s)	895
BsnI	GGCC	4 cut(s)	46, 227, 692, 1301
Bso31I	GGTCTC	2 cut(s)	563, 709
BsoBI	CYCGRG	2 cut(s)	368, 606
Bsp1286I	GDGCHC	2 cut(s)	607, 1148
Bsp143I	GATC	7 cut(s)	78, 684, 874, 991, 1070, 1108, 1132
Bsp1720I	GCTNAGC	1 cut(s)	499
Bsp19I	CCATGG	1 cut(s)	1296
BspACI	CCGC	5 cut(s)	173, 296, 465, 986, 1100
BspANI	GGCC	4 cut(s)	46, 227, 692, 1301
BspCNI	CTCAG	4 cut(s)	512, 631, 719, 757
BspDI	ATCGAT	1 cut(s)	339
BspLI	GGNNCC	4 cut(s)	233, 304, 883, 1145
BspPI	GGATC	1 cut(s)	86
BspT107I	GGYRCC	1 cut(s)	231
BspTNI	GGTCTC	2 cut(s)	563, 709
BsrBI	CCGCTC	1 cut(s)	175
BsrDI	GCAATG	2 cut(s)	298, 1042
BsrFI	RCCGGY	1 cut(s)	146
BsrI	ACTGG	2 cut(s)	578, 797
BssAI	RCCGGY	1 cut(s)	146
BssECI	CCNNGG	5 cut(s)	51, 62, 486, 1153, 1296
BssMI	GATC	7 cut(s)	78, 684, 874, 991, 1070, 1108, 1132
BssNAI	GTATAC	1 cut(s)	807
BssNI	GRCGYC	2 cut(s)	59, 232
BssSI	CACGAG	4 cut(s)	176, 206, 552, 1125
BssT1I	CCWWGG	3 cut(s)	486, 1153, 1296
Bst1107I	GTATAC	1 cut(s)	807
Bst2BI	CACGAG	4 cut(s)	176, 206, 552, 1125
Bst2UI	CCWGG	1 cut(s)	939
Bst4CI	ACNGT	2 cut(s)	37, 680
BstACI	GRCGYC	2 cut(s)	59, 232
BstBAI	YACGTR	2 cut(s)	450, 860
BstC8I	GCNNGC	5 cut(s)	48, 850, 984, 1024, 1230
BstDEI	CTNAG	8 cut(s)	194, 499, 618, 663, 706, 750, 765, 1067
BstDSI	CCRYGG	1 cut(s)	1296
BstENI	CCTNNNNNAGG	1 cut(s)	1245
BstF5I	GGATG	2 cut(s)	387, 593
BstH2I	RGCGCY	1 cut(s)	235
BstHHI	GCGC	3 cut(s)	234, 361, 982
BstKTI	GATC	7 cut(s)	81, 687, 877, 994, 1073, 1111, 1135
BstMAI	GTCTC	4 cut(s)	50, 563, 603, 709
BstMBI	GATC	7 cut(s)	78, 684, 874, 991, 1070, 1108, 1132
BstMWI	GCNNNNNNNGC	8 cut(s)	238, 302, 333, 628, 854, 979, 1032, 1099
BstNI	CCWGG	1 cut(s)	939
BstNSI	RCATGY	1 cut(s)	852
BstSCI	CCNGG	2 cut(s)	227, 937
BstSLI	GKGCMC	1 cut(s)	607
BstV1I	GCAGC	1 cut(s)	1006
BstV2I	GAAGAC	1 cut(s)	386
BstX2I	RGATCY	2 cut(s)	78, 991
BstYI	RGATCY	2 cut(s)	78, 991
BstZ17I	GTATAC	1 cut(s)	807
Bsu15I	ATCGAT	1 cut(s)	339
Bsu36I	CCTNAGG	1 cut(s)	663
BsuRI	GGCC	4 cut(s)	46, 227, 692, 1301
BsuTUI	ATCGAT	1 cut(s)	339
BtgI	CCRYGG	1 cut(s)	1296
BtsCI	GGATG	2 cut(s)	387, 593
Cac8I	GCNNGC	5 cut(s)	48, 850, 984, 1024, 1230
CaiI	CAGNNNCTG	1 cut(s)	73
CfoI	GCGC	3 cut(s)	234, 361, 982
Cfr10I	RCCGGY	1 cut(s)	146
Cfr13I	GGNCC	1 cut(s)	882
ClaI	ATCGAT	1 cut(s)	339
CseI	GACGC	1 cut(s)	67
CsiI	ACCWGGT	1 cut(s)	937
Csp6I	GTAC	1 cut(s)	451
CviAII	CATG	8 cut(s)	94, 494, 537, 802, 833, 849, 1222, 1297
CviQI	GTAC	1 cut(s)	451
DdeI	CTNAG	8 cut(s)	194, 499, 618, 663, 706, 750, 765, 1067
DinI	GGCGCC	1 cut(s)	233
DpnI	GATC	7 cut(s)	80, 686, 876, 993, 1072, 1110, 1134
DpnII	GATC	7 cut(s)	78, 684, 874, 991, 1070, 1108, 1132
DraIII	CACNNNGTG	1 cut(s)	1271
EaeI	YGGCCR	2 cut(s)	225, 1299
EciI	GGCGGA	1 cut(s)	480
Eco130I	CCWWGG	3 cut(s)	486, 1153, 1296
Eco24I	GRGCYC	1 cut(s)	1148
Eco31I	GGTCTC	2 cut(s)	563, 709
Eco32I	GATATC	1 cut(s)	417
Eco47I	GGWCC	1 cut(s)	882
Eco57I	CTGAAG	2 cut(s)	257, 1079
Eco72I	CACGTG	1 cut(s)	860
Eco81I	CCTNAGG	1 cut(s)	663
Eco88I	CYCGRG	2 cut(s)	368, 606
EcoNI	CCTNNNNNAGG	1 cut(s)	1245
EcoRI	GAATTC	2 cut(s)	268, 1236
EcoRII	CCWGG	1 cut(s)	937
EcoRV	GATATC	1 cut(s)	417
EcoT14I	CCWWGG	3 cut(s)	486, 1153, 1296
EcoT38I	GRGCYC	1 cut(s)	1148
EgeI	GGCGCC	1 cut(s)	233
EheI	GGCGCC	1 cut(s)	233
ErhI	CCWWGG	3 cut(s)	486, 1153, 1296
Esp3I	CGTCTC	1 cut(s)	50
FaeI	CATG	8 cut(s)	97, 497, 540, 805, 836, 852, 1225, 1300
FaqI	GGGAC	1 cut(s)	895
FatI	CATG	8 cut(s)	93, 493, 536, 801, 832, 848, 1221, 1296
FauI	CCCGC	2 cut(s)	180, 979
FauNDI	CATATG	2 cut(s)	814, 1323
FbaI	TGATCA	1 cut(s)	874
FblI	GTMKAC	3 cut(s)	755, 806, 1210
Fnu4HI	GCNGC	2 cut(s)	1020, 1100
FokI	GGATG	2 cut(s)	374, 580
FriOI	GRGCYC	1 cut(s)	1148
Fsp4HI	GCNGC	2 cut(s)	1020, 1100
FspBI	CTAG	4 cut(s)	120, 1043, 1164, 1242
GlaI	GCGC	3 cut(s)	233, 360, 981
GluI	GCNGC	2 cut(s)	1020, 1100
HaeII	RGCGCY	1 cut(s)	235
HaeIII	GGCC	4 cut(s)	46, 227, 692, 1301
HapII	CCGG	2 cut(s)	147, 228
HgaI	GACGC	1 cut(s)	67
HhaI	GCGC	3 cut(s)	234, 361, 982
Hin1I	GRCGYC	2 cut(s)	59, 232
Hin1II	CATG	8 cut(s)	97, 497, 540, 805, 836, 852, 1225, 1300
Hin6I	GCGC	3 cut(s)	232, 359, 980
HinP1I	GCGC	3 cut(s)	232, 359, 980
HincII	GTYRAC	4 cut(s)	13, 33, 756, 1211
HindII	GTYRAC	4 cut(s)	13, 33, 756, 1211
HinfI	GANTC	5 cut(s)	29, 329, 364, 382, 439
HpaII	CCGG	2 cut(s)	147, 228
HphI	GGTGA	3 cut(s)	52, 632, 692
Hpy166II	GTNNAC	8 cut(s)	13, 33, 106, 756, 807, 863, 1211, 1348
Hpy188I	TCNGA	4 cut(s)	55, 544, 1113, 1143
Hpy188III	TCNNGA	6 cut(s)	368, 560, 742, 1079, 1088, 1106
Hpy8I	GTNNAC	8 cut(s)	13, 33, 106, 756, 807, 863, 1211, 1348
HpyAV	CCTTC	3 cut(s)	903, 1241, 1246
HpyCH4III	ACNGT	2 cut(s)	37, 680
HpyCH4IV	ACGT	4 cut(s)	15, 449, 859, 894
HpyCH4V	TGCA	9 cut(s)	152, 291, 336, 848, 852, 922, 956, 1022, 1274
HpyF10VI	GCNNNNNNNGC	8 cut(s)	238, 302, 333, 628, 854, 979, 1032, 1099
HpyF3I	CTNAG	8 cut(s)	194, 499, 618, 663, 706, 750, 765, 1067
HpySE526I	ACGT	4 cut(s)	15, 449, 859, 894
Hsp92I	GRCGYC	2 cut(s)	59, 232
Hsp92II	CATG	8 cut(s)	97, 497, 540, 805, 836, 852, 1225, 1300
HspAI	GCGC	3 cut(s)	232, 359, 980
KasI	GGCGCC	1 cut(s)	231
Ksp22I	TGATCA	1 cut(s)	874
Kzo9I	GATC	7 cut(s)	78, 684, 874, 991, 1070, 1108, 1132
LmnI	GCTCC	3 cut(s)	302, 727, 1143
Lsp1109I	GCAGC	1 cut(s)	1006
LweI	GCATC	2 cut(s)	345, 1180
MabI	ACCWGGT	1 cut(s)	937
MaeI	CTAG	4 cut(s)	120, 1043, 1164, 1242
MaeII	ACGT	4 cut(s)	15, 449, 859, 894
MaeIII	GTNAC	3 cut(s)	445, 941, 1171
MalI	GATC	7 cut(s)	80, 686, 876, 993, 1072, 1110, 1134
MbiI	CCGCTC	1 cut(s)	175
MboI	GATC	7 cut(s)	78, 684, 874, 991, 1070, 1108, 1132
MboII	GAAGA	6 cut(s)	196, 391, 411, 680, 785, 1301
MfeI	CAATTG	1 cut(s)	286
MflI	RGATCY	2 cut(s)	78, 991
MhlI	GDGCHC	2 cut(s)	607, 1148
MlsI	TGGCCA	1 cut(s)	1301
MluCI	AATT	5 cut(s)	268, 286, 570, 716, 1236
MluNI	TGGCCA	1 cut(s)	1301
Mly113I	GGCGCC	1 cut(s)	232
MlyI	GAGTC	4 cut(s)	38, 323, 358, 376
Mox20I	TGGCCA	1 cut(s)	1301
MscI	TGGCCA	1 cut(s)	1301
Msp20I	TGGCCA	1 cut(s)	1301
MspI	CCGG	2 cut(s)	147, 228
MspR9I	CCNGG	2 cut(s)	229, 939
MunI	CAATTG	1 cut(s)	286
MvaI	CCWGG	1 cut(s)	939
MwoI	GCNNNNNNNGC	8 cut(s)	238, 302, 333, 628, 854, 979, 1032, 1099
NarI	GGCGCC	1 cut(s)	232
NciI	CCSGG	1 cut(s)	229
NcoI	CCATGG	1 cut(s)	1296
NdeI	CATATG	2 cut(s)	814, 1323
NdeII	GATC	7 cut(s)	78, 684, 874, 991, 1070, 1108, 1132
NlaIII	CATG	8 cut(s)	97, 497, 540, 805, 836, 852, 1225, 1300
NlaIV	GGNNCC	4 cut(s)	233, 304, 883, 1145
NmeAIII	GCCGAG	1 cut(s)	43
NmuCI	GTSAC	1 cut(s)	445
NspI	RCATGY	1 cut(s)	852
PaeI	GCATGC	1 cut(s)	852
PcsI	WCGNNNNNNNCGW	1 cut(s)	1132
PfeI	GAWTC	1 cut(s)	439
PkrI	GCNGC	2 cut(s)	1021, 1101
PleI	GAGTC	4 cut(s)	37, 323, 358, 376
PluTI	GGCGCC	1 cut(s)	235
PmaCI	CACGTG	1 cut(s)	860
PmlI	CACGTG	1 cut(s)	860
PpsI	GAGTC	4 cut(s)	37, 323, 358, 376
Ppu21I	YACGTR	2 cut(s)	450, 860
Psp6I	CCWGG	1 cut(s)	937
PspCI	CACGTG	1 cut(s)	860
PspGI	CCWGG	1 cut(s)	937
PspN4I	GGNNCC	4 cut(s)	233, 304, 883, 1145
PspPI	GGNCC	1 cut(s)	882
PstNI	CAGNNNCTG	1 cut(s)	73
PsuI	RGATCY	2 cut(s)	78, 991
RsaI	GTAC	1 cut(s)	452
RsaNI	GTAC	1 cut(s)	451
SalI	GTCGAC	2 cut(s)	754, 1209
SatI	GCNGC	2 cut(s)	1020, 1100
Sau3AI	GATC	7 cut(s)	78, 684, 874, 991, 1070, 1108, 1132
Sau96I	GGNCC	1 cut(s)	882
SchI	GAGTC	4 cut(s)	38, 323, 358, 376
ScrFI	CCNGG	2 cut(s)	229, 939
SduI	GDGCHC	2 cut(s)	607, 1148
SexAI	ACCWGGT	1 cut(s)	937
SfaNI	GCATC	2 cut(s)	345, 1180
SfoI	GGCGCC	1 cut(s)	233
SinI	GGWCC	1 cut(s)	882
SmlI	CTYRAG	1 cut(s)	1088
SmoI	CTYRAG	1 cut(s)	1088
SpeI	ACTAGT	1 cut(s)	1163
SphI	GCATGC	1 cut(s)	852
Sse9I	AATT	5 cut(s)	268, 286, 570, 716, 1236
SsiI	CCGC	5 cut(s)	173, 296, 465, 986, 1100
SspDI	GGCGCC	1 cut(s)	231
SspMI	CTAG	4 cut(s)	120, 1043, 1164, 1242
StyD4I	CCNGG	2 cut(s)	227, 937
StyI	CCWWGG	3 cut(s)	486, 1153, 1296
TaaI	ACNGT	2 cut(s)	37, 680
TaiI	ACGT	4 cut(s)	18, 452, 862, 897
TaqI	TCGA	8 cut(s)	279, 339, 561, 585, 648, 755, 1080, 1210
TasI	AATT	5 cut(s)	268, 286, 570, 716, 1236
TauI	GCSGC	1 cut(s)	1102
TfiI	GAWTC	1 cut(s)	439
TseFI	GTSAC	1 cut(s)	445
TseI	GCWGC	1 cut(s)	1019
Tsp45I	GTSAC	1 cut(s)	445
TspDTI	ATGAA	4 cut(s)	17, 1210, 1295, 1340
TspGWI	ACGGA	3 cut(s)	8, 315, 590
VpaK11BI	GGWCC	1 cut(s)	882
XagI	CCTNNNNNAGG	1 cut(s)	1245
XapI	RAATTY	3 cut(s)	268, 716, 1236
XceI	RCATGY	1 cut(s)	852
XmiI	GTMKAC	3 cut(s)	755, 806, 1210
XspI	CTAG	4 cut(s)	120, 1043, 1164, 1242

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.