Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Forward (+)

72652543 .. 72653943

Gene Structure 1401 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ34226

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1401 bp

ATGGCGGTCGGCATCAGTGTGAGGGAGTCAATAATGGTGAAGCCAGCAGTGGAGACGCCTCGCCGGTCGCTGTGGATCTCAAACTTGGACATGGTGAGTTCGAATGCTCACACTCCCACTGTTTATTTCTACAGGCCCGAAAACGGCGGTGCAGTTGACAATGGCAACTTCTTTGACCCCATCGAGCTGAAGGAAGCCCTCAGCAAGGCCCTAGTGCCCTTCTACCCGTTGGCTGGTCGCCTGCAGCGAAACAACGAGGACAAGAATGGTCGTGTCGAAATTGATTGCAATGCAGATGGCGTGTTGTTTGTTTTTGCCGACAGCAGCTATTGCATAGATGACTTTGGTGATTTTCTGCCCACTCCCGAGTTTGGGAGCATGCTCATCCCTGATGTTGATTATTCGGCGGGGATATCTTCTTATGCCCTCCTTGTAGTTCAGATCACGTACTTGAAATGCGGTGGAGTGGTACTTGGTATTGGCTTTGAACATTGCGTAGCAGATGGATTTTCTGCTCTTCACTTTATAAATGCATGGTCTGATATGGCTCGTGGTCTCGACCTTGCAATTCCACCAAACCTTGACAGGACATTACTTCGTGCACGAGAACCACCTCAGCCTTTACTTCACCACAATCACCATGTCGAATACCAACCTGCTCCACTGCCCACCACAGAAGCCACTGCTGGTGCTGATCCCGACTATGAGACCGCCACGGCAACGACAGTCTCCATTTTTAAGTTCACAAAGGAGCATATCAACATCTTGAAAGCTAAGTCATCAAATGATGATGGGAATTCATCAATGAAGTACACTTCATATGAGGTATTTGCAGCTCATGTCTGGAGATGTGCATGCAAGGCACGTGAACTTGCTGATGATCAAGAGACACAATTCCACATTGCCGCAAACGGAAGGTCGAGATTGCAGTCCCCAATTCCACCTGGTTACTTTGGTAATGTGATTTTCTGCGGCGCACCAACTGCATTCGCAGGGGATATCATATCGAAACCAATAGGGTATGCAGCGAGCTGTATTCACAATACCTTGGTACGTATGGACGATGATTATCTTCGATCGGCTCTCGACTATCTTGAGCTTCAGCAATCTCATCGTCATCTGTCAGACTTCGCTCGCGGGGCTCATTATTGGAAGTGCCCTAATCTTGGGATAACTAGTTGGGTCACGCTGCCGATCTACGATGCTGATTTTAGATGGGGTCGACCCATTTTCGTGGGCCGTGGTAAAATTTTACATGAAGGGAAGGCTTACACAATACCAAAGGCAGGTAACGATGGGAGTTTTTCTCTGGCCATTAATTGCTCTGCAATATCAACCAAAGTCACACGAAACGTGGAACGTTGCGGTACGGGAACGCGATACGGGTACGCGGTACGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

466

Amino Acids

51.39

Weight (kDa)

6.01

Isoelectric Point (pI)

34.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	5 - 439	2.9e-95	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	527
Acc36I	ACCTGC	2 cut(s)	664, 1277
AccI	GTMKAC	1 cut(s)	1222
AccII	CGCG	3 cut(s)	1137, 1378, 1391
AclI	AACGTT	1 cut(s)	1360
AclWI	GGATC	2 cut(s)	83, 689
AcoI	YGGCCR	1 cut(s)	1311
AcsI	RAATTY	2 cut(s)	796, 1248
AcuI	CTGAAG	2 cut(s)	209, 1085
AcvI	CACGTG	1 cut(s)	866
AcyI	GRCGYC	1 cut(s)	56
AfaI	GTAC	7 cut(s)	449, 471, 812, 1053, 1369, 1388, 1395
AfiI	CCNNNNNNNGG	7 cut(s)	143, 205, 233, 371, 372, 1166, 1286
AgsI	TTSAA	3 cut(s)	454, 488, 769
AhlI	ACTAGT	1 cut(s)	1175
AjnI	CCWGG	1 cut(s)	943
AluBI	AGCT	6 cut(s)	187, 327, 773, 836, 1032, 1099
AluI	AGCT	6 cut(s)	187, 327, 773, 836, 1032, 1099
Alw21I	GWGCWC	1 cut(s)	604
Alw26I	GTCTC	5 cut(s)	47, 560, 701, 733, 881
Alw44I	GTGCAC	1 cut(s)	600
AlwI	GGATC	2 cut(s)	83, 689
Ama87I	CYCGRG	1 cut(s)	365
AoxI	GGCC	4 cut(s)	134, 207, 1237, 1311
ApaLI	GTGCAC	1 cut(s)	600
ApeKI	GCWGC	5 cut(s)	244, 324, 833, 1025, 1189
ApoI	RAATTY	2 cut(s)	796, 1248
ArsI	GACNNNNNNTTYG	2 cut(s)	902, 934
AseI	ATTAAT	1 cut(s)	1317
AspLEI	GCGC	1 cut(s)	977
AspS9I	GGNCC	3 cut(s)	135, 208, 1237
AsuHPI	GGTGA	5 cut(s)	49, 106, 359, 620, 629
AsuII	TTCGAA	1 cut(s)	101
AvaI	CYCGRG	1 cut(s)	365
BaeGI	GKGCMC	3 cut(s)	219, 604, 1160
BalI	TGGCCA	1 cut(s)	1313
BanII	GRGCYC	1 cut(s)	1144
BauI	CACGAG	2 cut(s)	549, 603
BbrPI	CACGTG	1 cut(s)	866
Bbv12I	GWGCWC	1 cut(s)	604
BbvCI	CCTCAGC	2 cut(s)	200, 615
BbvI	GCAGC	5 cut(s)	256, 336, 845, 1037, 1176
BccI	CCATC	6 cut(s)	188, 290, 497, 785, 1209, 1289
BceAI	ACGGC	3 cut(s)	160, 732, 1224
BcgI	CGANNNNNNTGC	2 cut(s)	1094, 1128
BciT130I	CCWGG	1 cut(s)	945
BclI	TGATCA	1 cut(s)	880
BcoDI	GTCTC	5 cut(s)	47, 560, 701, 733, 881
BcuI	ACTAGT	1 cut(s)	1175
BfaI	CTAG	2 cut(s)	212, 1176
BfmI	CTRYAG	2 cut(s)	130, 242
BfuAI	ACCTGC	2 cut(s)	664, 1277
BisI	GCNGC	7 cut(s)	245, 325, 834, 906, 973, 1026, 1190
BlsI	GCNGC	7 cut(s)	246, 326, 835, 907, 974, 1027, 1191
Bme1390I	CCNGG	1 cut(s)	945
BmeT110I	CYCGRG	1 cut(s)	365
BmgT120I	GGNCC	3 cut(s)	135, 208, 1237
BmrFI	CCNGG	1 cut(s)	945
BmsI	GCATC	2 cut(s)	21, 1192
BplI	GAGNNNNNCTC	2 cut(s)	1291, 1323
BpmI	CTGGAG	1 cut(s)	865
Bpu10I	CCTNAGC	2 cut(s)	200, 615
Bpu14I	TTCGAA	1 cut(s)	101
BpuEI	CTTGAG	1 cut(s)	1115
BsaAI	YACGTR	3 cut(s)	447, 866, 1055
BsaBI	GATNNNNATC	1 cut(s)	1068
BsaHI	GRCGYC	1 cut(s)	56
BsaI	GGTCTC	2 cut(s)	560, 701
BsaJI	CCNNGG	3 cut(s)	714, 1047, 1240
Bsc4I	CCNNNNNNNGG	7 cut(s)	143, 205, 233, 371, 372, 1166, 1286
Bse118I	RCCGGY	1 cut(s)	63
Bse3DI	GCAATG	3 cut(s)	295, 490, 900
Bse8I	GATNNNNATC	1 cut(s)	1068
BseBI	CCWGG	1 cut(s)	945
BseDI	CCNNGG	3 cut(s)	714, 1047, 1240
BseGI	GGATG	1 cut(s)	384
BseJI	GATNNNNATC	1 cut(s)	1068
BseLI	CCNNNNNNNGG	7 cut(s)	143, 205, 233, 371, 372, 1166, 1286
BseMI	GCAATG	3 cut(s)	295, 490, 900
BseMII	CTCAG	2 cut(s)	214, 629
BseSI	GKGCMC	3 cut(s)	219, 604, 1160
BseXI	GCAGC	5 cut(s)	256, 336, 845, 1037, 1176
BsgI	GTGCAG	1 cut(s)	171
Bsh1236I	CGCG	3 cut(s)	1137, 1378, 1391
Bsh1285I	CGRYCG	3 cut(s)	9, 68, 1079
BshFI	GGCC	4 cut(s)	136, 209, 1239, 1313
BsiEI	CGRYCG	3 cut(s)	9, 68, 1079
BsiHKAI	GWGCWC	1 cut(s)	604
BsiHKCI	CYCGRG	1 cut(s)	365
BsiSI	CCGG	1 cut(s)	64
BslFI	GGGAC	1 cut(s)	916
BslI	CCNNNNNNNGG	7 cut(s)	143, 205, 233, 371, 372, 1166, 1286
BsmAI	GTCTC	5 cut(s)	47, 560, 701, 733, 881
BsmBI	CGTCTC	1 cut(s)	47
BsmFI	GGGAC	1 cut(s)	916
BsmI	GAATGC	2 cut(s)	109, 986
BsnI	GGCC	4 cut(s)	136, 209, 1239, 1313
Bso31I	GGTCTC	2 cut(s)	560, 701
BsoBI	CYCGRG	1 cut(s)	365
Bsp119I	TTCGAA	1 cut(s)	101
Bsp1286I	GDGCHC	4 cut(s)	219, 604, 1144, 1160
Bsp143I	GATC	6 cut(s)	75, 441, 694, 880, 1076, 1194
BspANI	GGCC	4 cut(s)	136, 209, 1239, 1313
BspCNI	CTCAG	2 cut(s)	213, 628
BspFNI	CGCG	3 cut(s)	1137, 1378, 1391
BspMAI	CTGCAG	1 cut(s)	246
BspMI	ACCTGC	2 cut(s)	664, 1277
BspPI	GGATC	2 cut(s)	83, 689
BspQI	GCTCTTC	1 cut(s)	522
BspT104I	TTCGAA	1 cut(s)	101
BspTNI	GGTCTC	2 cut(s)	560, 701
BsrDI	GCAATG	3 cut(s)	295, 490, 900
BsrFI	RCCGGY	1 cut(s)	63
BssAI	RCCGGY	1 cut(s)	63
BssECI	CCNNGG	3 cut(s)	714, 1047, 1240
BssMI	GATC	6 cut(s)	75, 441, 694, 880, 1076, 1194
BssNI	GRCGYC	1 cut(s)	56
BssSI	CACGAG	2 cut(s)	549, 603
BssT1I	CCWWGG	1 cut(s)	1047
Bst2BI	CACGAG	2 cut(s)	549, 603
Bst2UI	CCWGG	1 cut(s)	945
Bst4CI	ACNGT	2 cut(s)	121, 727
Bst6I	CTCTTC	1 cut(s)	522
BstACI	GRCGYC	1 cut(s)	56
BstAPI	GCANNNNNTGC	2 cut(s)	330, 983
BstBAI	YACGTR	3 cut(s)	447, 866, 1055
BstBI	TTCGAA	1 cut(s)	101
BstC8I	GCNNGC	6 cut(s)	45, 242, 380, 856, 1030, 1135
BstDEI	CTNAG	3 cut(s)	200, 615, 774
BstDSI	CCRYGG	2 cut(s)	714, 1240
BstENI	CCTNNNNNAGG	1 cut(s)	203
BstF5I	GGATG	1 cut(s)	384
BstFNI	CGCG	3 cut(s)	1137, 1378, 1391
BstHHI	GCGC	1 cut(s)	977
BstKTI	GATC	6 cut(s)	78, 444, 697, 883, 1079, 1197
BstMAI	GTCTC	5 cut(s)	47, 560, 701, 733, 881
BstMBI	GATC	6 cut(s)	75, 441, 694, 880, 1076, 1194
BstMCI	CGRYCG	3 cut(s)	9, 68, 1079
BstMWI	GCNNNNNNNGC	4 cut(s)	330, 860, 983, 1139
BstNI	CCWGG	1 cut(s)	945
BstNSI	RCATGY	2 cut(s)	382, 858
BstSCI	CCNGG	1 cut(s)	943
BstSFI	CTRYAG	2 cut(s)	130, 242
BstSLI	GKGCMC	3 cut(s)	219, 604, 1160
BstSNI	TACGTA	1 cut(s)	1055
BstUI	CGCG	3 cut(s)	1137, 1378, 1391
BstV1I	GCAGC	5 cut(s)	256, 336, 845, 1037, 1176
BstX2I	RGATCY	1 cut(s)	75
BstXI	CCANNNNNNTGG	1 cut(s)	1234
BstYI	RGATCY	1 cut(s)	75
BsuRI	GGCC	4 cut(s)	136, 209, 1239, 1313
BtgI	CCRYGG	2 cut(s)	714, 1240
BtsCI	GGATG	1 cut(s)	384
BtsI	GCAGTG	3 cut(s)	54, 662, 681
BtsIMutI	CAGTG	5 cut(s)	22, 54, 117, 662, 681
BveI	ACCTGC	2 cut(s)	664, 1277
Cac8I	GCNNGC	6 cut(s)	45, 242, 380, 856, 1030, 1135
CfoI	GCGC	1 cut(s)	977
Cfr10I	RCCGGY	1 cut(s)	63
Cfr13I	GGNCC	3 cut(s)	135, 208, 1237
CseI	GACGC	1 cut(s)	64
CsiI	ACCWGGT	1 cut(s)	943
Csp6I	GTAC	7 cut(s)	448, 470, 811, 1052, 1368, 1387, 1394
CviAII	CATG	7 cut(s)	91, 379, 534, 641, 839, 855, 1256
CviQI	GTAC	7 cut(s)	448, 470, 811, 1052, 1368, 1387, 1394
DdeI	CTNAG	3 cut(s)	200, 615, 774
DpnI	GATC	6 cut(s)	77, 443, 696, 882, 1078, 1196
DpnII	GATC	6 cut(s)	75, 441, 694, 880, 1076, 1194
EaeI	YGGCCR	1 cut(s)	1311
Eam1104I	CTCTTC	1 cut(s)	522
EarI	CTCTTC	1 cut(s)	522
Eco105I	TACGTA	1 cut(s)	1055
Eco130I	CCWWGG	1 cut(s)	1047
Eco24I	GRGCYC	1 cut(s)	1144
Eco31I	GGTCTC	2 cut(s)	560, 701
Eco32I	GATATC	2 cut(s)	414, 1000
Eco57I	CTGAAG	2 cut(s)	209, 1085
Eco72I	CACGTG	1 cut(s)	866
Eco88I	CYCGRG	1 cut(s)	365
EcoNI	CCTNNNNNAGG	1 cut(s)	203
EcoO109I	RGGNCCY	1 cut(s)	208
EcoRI	GAATTC	1 cut(s)	796
EcoRII	CCWGG	1 cut(s)	943
EcoRV	GATATC	2 cut(s)	414, 1000
EcoT14I	CCWWGG	1 cut(s)	1047
EcoT22I	ATGCAT	1 cut(s)	535
EcoT38I	GRGCYC	1 cut(s)	1144
ErhI	CCWWGG	1 cut(s)	1047
Esp3I	CGTCTC	1 cut(s)	47
FaeI	CATG	7 cut(s)	94, 382, 537, 644, 842, 858, 1259
FaqI	GGGAC	1 cut(s)	916
FatI	CATG	7 cut(s)	90, 378, 533, 640, 838, 854, 1255
FauI	CCCGC	2 cut(s)	400, 1130
FauNDI	CATATG	1 cut(s)	820
FbaI	TGATCA	1 cut(s)	880
FblI	GTMKAC	1 cut(s)	1222
Fnu4HI	GCNGC	7 cut(s)	245, 325, 834, 906, 973, 1026, 1190
FokI	GGATG	1 cut(s)	371
FriOI	GRGCYC	1 cut(s)	1144
Fsp4HI	GCNGC	7 cut(s)	245, 325, 834, 906, 973, 1026, 1190
FspBI	CTAG	2 cut(s)	212, 1176
GlaI	GCGC	1 cut(s)	976
GluI	GCNGC	7 cut(s)	245, 325, 834, 906, 973, 1026, 1190
GsuI	CTGGAG	1 cut(s)	865
HaeIII	GGCC	4 cut(s)	136, 209, 1239, 1313
HapII	CCGG	1 cut(s)	64
HgaI	GACGC	1 cut(s)	64
HhaI	GCGC	1 cut(s)	977
Hin1I	GRCGYC	1 cut(s)	56
Hin1II	CATG	7 cut(s)	94, 382, 537, 644, 842, 858, 1259
Hin6I	GCGC	1 cut(s)	975
HinP1I	GCGC	1 cut(s)	975
HincII	GTYRAC	2 cut(s)	157, 1223
HindII	GTYRAC	2 cut(s)	157, 1223
HinfI	GANTC	1 cut(s)	26
HpaII	CCGG	1 cut(s)	64
HphI	GGTGA	5 cut(s)	49, 106, 359, 620, 629
Hpy166II	GTNNAC	6 cut(s)	157, 602, 744, 813, 869, 1223
Hpy188I	TCNGA	3 cut(s)	441, 541, 1126
Hpy188III	TCNNGA	9 cut(s)	365, 557, 698, 766, 844, 884, 921, 1085, 1094
Hpy8I	GTNNAC	6 cut(s)	157, 602, 744, 813, 869, 1223
HpyAV	CCTTC	5 cut(s)	184, 229, 909, 1253, 1258
HpyCH4III	ACNGT	2 cut(s)	121, 727
HpyCH4IV	ACGT	6 cut(s)	446, 865, 1054, 1353, 1360, 1396
HpyF10VI	GCNNNNNNNGC	4 cut(s)	330, 860, 983, 1139
HpyF3I	CTNAG	3 cut(s)	200, 615, 774
HpySE526I	ACGT	6 cut(s)	446, 865, 1054, 1353, 1360, 1396
Hsp92I	GRCGYC	1 cut(s)	56
Hsp92II	CATG	7 cut(s)	94, 382, 537, 644, 842, 858, 1259
HspAI	GCGC	1 cut(s)	975
Ksp22I	TGATCA	1 cut(s)	880
Kzo9I	GATC	6 cut(s)	75, 441, 694, 880, 1076, 1194
LguI	GCTCTTC	1 cut(s)	522
LmnI	GCTCC	3 cut(s)	375, 664, 751
Lsp1109I	GCAGC	5 cut(s)	256, 336, 845, 1037, 1176
LweI	GCATC	2 cut(s)	21, 1192
MabI	ACCWGGT	1 cut(s)	943
MaeI	CTAG	2 cut(s)	212, 1176
MaeII	ACGT	6 cut(s)	446, 865, 1054, 1353, 1360, 1396
MaeIII	GTNAC	4 cut(s)	947, 1183, 1289, 1342
MalI	GATC	6 cut(s)	77, 443, 696, 882, 1078, 1196
MboI	GATC	6 cut(s)	75, 441, 694, 880, 1076, 1194
MboII	GAAGA	3 cut(s)	408, 509, 1064
MflI	RGATCY	1 cut(s)	75
MhlI	GDGCHC	4 cut(s)	219, 604, 1144, 1160
MlsI	TGGCCA	1 cut(s)	1313
MluCI	AATT	7 cut(s)	279, 567, 796, 893, 936, 1248, 1318
MluNI	TGGCCA	1 cut(s)	1313
MlyI	GAGTC	1 cut(s)	35
MnlI	CCTC	7 cut(s)	15, 69, 209, 250, 437, 624, 817
Mox20I	TGGCCA	1 cut(s)	1313
Mph1103I	ATGCAT	1 cut(s)	535
MscI	TGGCCA	1 cut(s)	1313
MseI	TTAA	2 cut(s)	738, 1317
MslI	CAYNNNNRTG	2 cut(s)	17, 1232
Msp20I	TGGCCA	1 cut(s)	1313
MspI	CCGG	1 cut(s)	64
MspR9I	CCNGG	1 cut(s)	945
Mva1269I	GAATGC	2 cut(s)	109, 986
MvaI	CCWGG	1 cut(s)	945
MvnI	CGCG	3 cut(s)	1137, 1378, 1391
MwoI	GCNNNNNNNGC	4 cut(s)	330, 860, 983, 1139
NdeI	CATATG	1 cut(s)	820
NdeII	GATC	6 cut(s)	75, 441, 694, 880, 1076, 1194
NlaIII	CATG	7 cut(s)	94, 382, 537, 644, 842, 858, 1259
NmuCI	GTSAC	2 cut(s)	1183, 1342
NsiI	ATGCAT	1 cut(s)	535
NspI	RCATGY	2 cut(s)	382, 858
NspV	TTCGAA	1 cut(s)	101
PaeI	GCATGC	2 cut(s)	382, 858
PciSI	GCTCTTC	1 cut(s)	522
PcsI	WCGNNNNNNNCGW	1 cut(s)	244
PctI	GAATGC	2 cut(s)	109, 986
PkrI	GCNGC	7 cut(s)	246, 326, 835, 907, 974, 1027, 1191
Ple19I	CGATCG	1 cut(s)	1079
PleI	GAGTC	1 cut(s)	34
PmaCI	CACGTG	1 cut(s)	866
PmlI	CACGTG	1 cut(s)	866
PpsI	GAGTC	1 cut(s)	34
Ppu21I	YACGTR	3 cut(s)	447, 866, 1055
PshBI	ATTAAT	1 cut(s)	1317
PsiI	TTATAA	1 cut(s)	527
Psp1406I	AACGTT	1 cut(s)	1360
Psp6I	CCWGG	1 cut(s)	943
PspCI	CACGTG	1 cut(s)	866
PspGI	CCWGG	1 cut(s)	943
PspPI	GGNCC	3 cut(s)	135, 208, 1237
PstI	CTGCAG	1 cut(s)	246
PsuI	RGATCY	1 cut(s)	75
PvuI	CGATCG	1 cut(s)	1079
RsaI	GTAC	7 cut(s)	449, 471, 812, 1053, 1369, 1388, 1395
RsaNI	GTAC	7 cut(s)	448, 470, 811, 1052, 1368, 1387, 1394
RseI	CAYNNNNRTG	2 cut(s)	17, 1232
SalI	GTCGAC	1 cut(s)	1221
SapI	GCTCTTC	1 cut(s)	522
SaqAI	TTAA	2 cut(s)	738, 1317
SatI	GCNGC	7 cut(s)	245, 325, 834, 906, 973, 1026, 1190
Sau3AI	GATC	6 cut(s)	75, 441, 694, 880, 1076, 1194
Sau96I	GGNCC	3 cut(s)	135, 208, 1237
SchI	GAGTC	1 cut(s)	35
ScrFI	CCNGG	1 cut(s)	945
SduI	GDGCHC	4 cut(s)	219, 604, 1144, 1160
SexAI	ACCWGGT	1 cut(s)	943
SfaNI	GCATC	2 cut(s)	21, 1192
SfcI	CTRYAG	2 cut(s)	130, 242
SfuI	TTCGAA	1 cut(s)	101
SmiMI	CAYNNNNRTG	2 cut(s)	17, 1232
SmlI	CTYRAG	1 cut(s)	1094
SmoI	CTYRAG	1 cut(s)	1094
SnaBI	TACGTA	1 cut(s)	1055
SpeI	ACTAGT	1 cut(s)	1175
SphI	GCATGC	2 cut(s)	382, 858
Sse9I	AATT	7 cut(s)	279, 567, 796, 893, 936, 1248, 1318
SspMI	CTAG	2 cut(s)	212, 1176
StyD4I	CCNGG	1 cut(s)	943
StyI	CCWWGG	1 cut(s)	1047
TaaI	ACNGT	2 cut(s)	121, 727
TaiI	ACGT	6 cut(s)	449, 868, 1057, 1356, 1363, 1399
TasI	AATT	7 cut(s)	279, 567, 796, 893, 936, 1248, 1318
TatI	WGTACW	1 cut(s)	810
TauI	GCSGC	2 cut(s)	908, 975
Tru1I	TTAA	2 cut(s)	738, 1317
Tru9I	TTAA	2 cut(s)	738, 1317
TscAI	CASTG	5 cut(s)	22, 54, 124, 669, 688
TseFI	GTSAC	2 cut(s)	1183, 1342
TseI	GCWGC	5 cut(s)	244, 324, 833, 1025, 1189
Tsp45I	GTSAC	2 cut(s)	1183, 1342
TspDTI	ATGAA	4 cut(s)	789, 807, 821, 1272
TspGWI	ACGGA	1 cut(s)	927
TspRI	CASTG	5 cut(s)	22, 54, 124, 669, 688
VneI	GTGCAC	1 cut(s)	600
VspI	ATTAAT	1 cut(s)	1317
XagI	CCTNNNNNAGG	1 cut(s)	203
XapI	RAATTY	2 cut(s)	796, 1248
XceI	RCATGY	2 cut(s)	382, 858
XmiI	GTMKAC	1 cut(s)	1222
XspI	CTAG	2 cut(s)	212, 1176
Zsp2I	ATGCAT	1 cut(s)	535

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.