Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Reverse (-)

17701774 .. 17703140

Gene Structure 1367 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00014370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1266 bp

ATGGCAGTCAACGTTAGCATCCGAGAGACAACAGTGGTGAGGCCAGCAGCGGAGACTCCTGGGCTGTCACTTTGGATCTCAAACTTAGACATGGTGAAGACCAACACTCACACTCCTCTTGTTTATTTCTACAAGCCAAAAAACATAGCTGGTGCAGGCGAGGACAACAATTTCTTTGACATGCACGTGCTGAAGGACGCGCTCAGCAAGGCCCTTGTGCCCTTTTACCCTTTCGCCGGCCGCCTACGGCAGAAAAAGGACGAAGGAGAGAATGGCCGTATCGAAATCGATTGCAATGCAGAGGGAGCCTTGTTTGCTGTGGCCGATAGCAGCTCTTGCATTAGTGATTTTGGTGATTTTGCACCCACTCCCGAATTCGGGAGAGGGCTCATCCCCATAGTTGATTATTCAGCTGGGATATCTTCTTTTCCCTTGTTGCTGGTTCAGATCACATACTTGAAATGTGGTGGAGTGGCACTTGGTCTTCGCGTGGACCCTCGTGTATCAGATGGATTATCTACTTTCCACTTCATAAATACATGGTCTGATATGGCTTGTGGTCTCGAGGTTGCAATTCGGCCAAGCATGGACAGGACGATACTTCGTGCCCGAGACCCACCTCGGCCTTTACCCGACCACATTCACCACATTGCATACCCTCCTCGGAATAAGCATGAGCGCGCTTCAGCAACAACGTTTACCTCATTTGAGGTGTTTGCAGGTCATGTATGGAGATGTGCCTGCAAGGCACGTGAACTAGCTAATGATCAAGAAACTATATTATACCTTTTTGTAAATGGAAGGTCCAGATTACAACCCCCTCTGCCACCTGGTTACTTCGGCAATGTGGTTTTCAGAGCCACAGCAACAGCCTTAGCAGGGGATCTCATATCGAAACCAATATGGTATGCTGCACGCTGTATTCACAATGCTTTGGTGCGTATGGACGATGATTATCTTCGATCAGCAATCGACTACCTGGAACTTCAGCAGCGTCATCAGGAACTGTCAAGCCTTGCTCATGGGACTCATTATAGGTGTCCTAATCTTGAGATAAATAGCTGGTGTAAATTGCCCATCTATGATGCTGATTTTGGGTGGGGTAGACCAATTTCCGTTGGGCGTTCTGAAATTCCAAGTGAAGGGAAGGGCTACATGGTACCTAGTGCAACTGATGATGGGAGTTTGTCACTGTCCATTAGTCTGCAATCTCAACATATGATATCATTTTCCAAGGATGTCTTACTTAACCACCCTCGGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

421

Amino Acids

46.79

Weight (kDa)

6.53

Isoelectric Point (pI)

46.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	4 - 216	6.9e-48	Transferase family
Transferase	PF02458	229 - 413	4.2e-45	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	710
Acc65I	GGTACC	1 cut(s)	1159
AccB1I	GGYRCC	1 cut(s)	1159
AccI	GTMKAC	1 cut(s)	1105
AccII	CGCG	3 cut(s)	200, 489, 681
AciI	CCGC	2 cut(s)	50, 241
AclI	AACGTT	2 cut(s)	12, 695
AclWI	GGATC	2 cut(s)	83, 891
AcoI	YGGCCR	4 cut(s)	238, 274, 321, 578
AcsI	RAATTY	2 cut(s)	374, 1131
AcuI	CTGAAG	3 cut(s)	212, 669, 971
AcvI	CACGTG	2 cut(s)	187, 752
AfaI	GTAC	1 cut(s)	1161
AfiI	CCNNNNNNNGG	5 cut(s)	236, 377, 378, 879, 1142
AgsI	TTSAA	1 cut(s)	460
AjnI	CCWGG	3 cut(s)	58, 829, 978
AluBI	AGCT	5 cut(s)	149, 333, 413, 761, 1062
AluI	AGCT	5 cut(s)	149, 333, 413, 761, 1062
Alw26I	GTCTC	4 cut(s)	20, 47, 566, 606
AlwI	GGATC	2 cut(s)	83, 891
AlwNI	CAGNNNCTG	1 cut(s)	1006
Ama87I	CYCGRG	2 cut(s)	563, 609
AoxI	GGCC	7 cut(s)	41, 210, 238, 274, 321, 578, 623
ApeKI	GCWGC	4 cut(s)	47, 330, 911, 991
ApoI	RAATTY	2 cut(s)	374, 1131
Asp718I	GGTACC	1 cut(s)	1159
AspLEI	GCGC	3 cut(s)	202, 681, 683
AspS9I	GGNCC	3 cut(s)	211, 493, 804
AsuHPI	GGTGA	4 cut(s)	49, 106, 365, 635
AvaI	CYCGRG	2 cut(s)	563, 609
AvaII	GGWCC	2 cut(s)	493, 804
BaeGI	GKGCMC	2 cut(s)	222, 610
BanI	GGYRCC	1 cut(s)	1159
BanII	GRGCYC	1 cut(s)	390
BauI	CACGAG	1 cut(s)	498
BbrPI	CACGTG	2 cut(s)	187, 752
BbsI	GAAGAC	2 cut(s)	104, 476
BbvI	GCAGC	4 cut(s)	59, 342, 898, 1003
BccI	CCATC	3 cut(s)	503, 1085, 1172
BceAI	ACGGC	2 cut(s)	261, 263
BcgI	CGANNNNNNTGC	2 cut(s)	278, 312
BciT130I	CCWGG	3 cut(s)	60, 831, 980
BclI	TGATCA	1 cut(s)	766
BcoDI	GTCTC	4 cut(s)	20, 47, 566, 606
BfaI	CTAG	2 cut(s)	758, 1164
BfuAI	ACCTGC	1 cut(s)	710
BglI	GCCNNNNNGGC	1 cut(s)	746
BisI	GCNGC	5 cut(s)	48, 241, 331, 912, 992
BlpI	GCTNAGC	1 cut(s)	203
BlsI	GCNGC	5 cut(s)	49, 242, 332, 913, 993
Bme1390I	CCNGG	3 cut(s)	60, 831, 980
Bme18I	GGWCC	2 cut(s)	493, 804
BmeT110I	CYCGRG	2 cut(s)	563, 609
BmgT120I	GGNCC	3 cut(s)	211, 493, 804
BmiI	GGNNCC	3 cut(s)	307, 495, 1161
BmrFI	CCNGG	3 cut(s)	60, 831, 980
BmsI	GCATC	2 cut(s)	27, 1075
BpiI	GAAGAC	2 cut(s)	104, 476
Bpu10I	CCTNAGC	1 cut(s)	874
Bpu1102I	GCTNAGC	1 cut(s)	203
BpuEI	CTTGAG	1 cut(s)	1070
Bsa29I	ATCGAT	1 cut(s)	288
BsaAI	YACGTR	2 cut(s)	187, 752
BsaBI	GATNNNNATC	1 cut(s)	954
BsaI	GGTCTC	2 cut(s)	566, 606
BsaJI	CCNNGG	5 cut(s)	59, 620, 662, 1233, 1256
BsaXI	ACNNNNNCTCC	2 cut(s)	97, 127
Bsc4I	CCNNNNNNNGG	5 cut(s)	236, 377, 378, 879, 1142
Bse118I	RCCGGY	1 cut(s)	236
Bse3DI	GCAATG	3 cut(s)	301, 648, 850
Bse8I	GATNNNNATC	1 cut(s)	954
BseBI	CCWGG	3 cut(s)	60, 831, 980
BseCI	ATCGAT	1 cut(s)	288
BseDI	CCNNGG	5 cut(s)	59, 620, 662, 1233, 1256
BseGI	GGATG	4 cut(s)	18, 390, 1243, 1266
BseJI	GATNNNNATC	1 cut(s)	954
BseLI	CCNNNNNNNGG	5 cut(s)	236, 377, 378, 879, 1142
BseMI	GCAATG	3 cut(s)	301, 648, 850
BseMII	CTCAG	1 cut(s)	217
BsePI	GCGCGC	1 cut(s)	679
BseRI	GAGGAG	2 cut(s)	105, 651
BseSI	GKGCMC	2 cut(s)	222, 610
BseX3I	CGGCCG	1 cut(s)	238
BseXI	GCAGC	4 cut(s)	59, 342, 898, 1003
BseYI	CCCAGC	1 cut(s)	413
BsgI	GTGCAG	2 cut(s)	174, 897
Bsh1236I	CGCG	3 cut(s)	200, 489, 681
Bsh1285I	CGRYCG	1 cut(s)	241
BshFI	GGCC	7 cut(s)	43, 212, 240, 276, 323, 580, 625
BshNI	GGYRCC	1 cut(s)	1159
BshVI	ATCGAT	1 cut(s)	288
BsiEI	CGRYCG	1 cut(s)	241
BsiHKCI	CYCGRG	2 cut(s)	563, 609
BsiSI	CCGG	1 cut(s)	237
BslFI	GGGAC	1 cut(s)	1039
BslI	CCNNNNNNNGG	5 cut(s)	236, 377, 378, 879, 1142
BsmAI	GTCTC	4 cut(s)	20, 47, 566, 606
BsmFI	GGGAC	1 cut(s)	1039
BsnI	GGCC	7 cut(s)	43, 212, 240, 276, 323, 580, 625
Bso31I	GGTCTC	2 cut(s)	566, 606
BsoBI	CYCGRG	2 cut(s)	563, 609
Bsp1286I	GDGCHC	3 cut(s)	222, 390, 610
Bsp143I	GATC	5 cut(s)	75, 447, 766, 883, 962
Bsp1720I	GCTNAGC	1 cut(s)	203
BspACI	CCGC	2 cut(s)	50, 241
BspANI	GGCC	7 cut(s)	43, 212, 240, 276, 323, 580, 625
BspCNI	CTCAG	1 cut(s)	216
BspDI	ATCGAT	1 cut(s)	288
BspFNI	CGCG	3 cut(s)	200, 489, 681
BspLI	GGNNCC	3 cut(s)	307, 495, 1161
BspMI	ACCTGC	1 cut(s)	710
BspPI	GGATC	2 cut(s)	83, 891
BspT107I	GGYRCC	1 cut(s)	1159
BspTNI	GGTCTC	2 cut(s)	566, 606
BsrDI	GCAATG	3 cut(s)	301, 648, 850
BsrFI	RCCGGY	1 cut(s)	236
BssAI	RCCGGY	1 cut(s)	236
BssECI	CCNNGG	5 cut(s)	59, 620, 662, 1233, 1256
BssHII	GCGCGC	1 cut(s)	679
BssMI	GATC	5 cut(s)	75, 447, 766, 883, 962
BssSI	CACGAG	1 cut(s)	498
BssT1I	CCWWGG	1 cut(s)	1233
Bst2BI	CACGAG	1 cut(s)	498
Bst2UI	CCWGG	3 cut(s)	60, 831, 980
Bst4CI	ACNGT	3 cut(s)	34, 1008, 1194
BstAPI	GCANNNNNTGC	1 cut(s)	336
BstBAI	YACGTR	2 cut(s)	187, 752
BstC8I	GCNNGC	6 cut(s)	45, 157, 238, 681, 742, 916
BstDEI	CTNAG	3 cut(s)	85, 203, 874
BstF5I	GGATG	4 cut(s)	18, 390, 1243, 1266
BstFNI	CGCG	3 cut(s)	200, 489, 681
BstHHI	GCGC	3 cut(s)	202, 681, 683
BstKTI	GATC	5 cut(s)	78, 450, 769, 886, 965
BstMAI	GTCTC	4 cut(s)	20, 47, 566, 606
BstMBI	GATC	5 cut(s)	75, 447, 766, 883, 962
BstMCI	CGRYCG	1 cut(s)	241
BstMWI	GCNNNNNNNGC	4 cut(s)	305, 314, 336, 746
BstNI	CCWGG	3 cut(s)	60, 831, 980
BstNSI	RCATGY	1 cut(s)	184
BstSCI	CCNGG	3 cut(s)	58, 829, 978
BstSLI	GKGCMC	2 cut(s)	222, 610
BstUI	CGCG	3 cut(s)	200, 489, 681
BstV1I	GCAGC	4 cut(s)	59, 342, 898, 1003
BstV2I	GAAGAC	2 cut(s)	104, 476
BstX2I	RGATCY	2 cut(s)	75, 883
BstYI	RGATCY	2 cut(s)	75, 883
BstZI	CGGCCG	1 cut(s)	238
Bsu15I	ATCGAT	1 cut(s)	288
BsuRI	GGCC	7 cut(s)	43, 212, 240, 276, 323, 580, 625
BsuTUI	ATCGAT	1 cut(s)	288
BtsCI	GGATG	4 cut(s)	18, 390, 1243, 1266
BtsIMutI	CAGTG	2 cut(s)	39, 1190
BveI	ACCTGC	1 cut(s)	710
Cac8I	GCNNGC	6 cut(s)	45, 157, 238, 681, 742, 916
CaiI	CAGNNNCTG	1 cut(s)	1006
CfoI	GCGC	3 cut(s)	202, 681, 683
Cfr10I	RCCGGY	1 cut(s)	236
Cfr13I	GGNCC	3 cut(s)	211, 493, 804
ClaI	ATCGAT	1 cut(s)	288
CseI	GACGC	2 cut(s)	206, 983
CsiI	ACCWGGT	1 cut(s)	829
Csp6I	GTAC	1 cut(s)	1160
CviAII	CATG	8 cut(s)	91, 181, 540, 586, 674, 725, 1022, 1156
CviQI	GTAC	1 cut(s)	1160
DdeI	CTNAG	3 cut(s)	85, 203, 874
DpnI	GATC	5 cut(s)	77, 449, 768, 885, 964
DpnII	GATC	5 cut(s)	75, 447, 766, 883, 962
EaeI	YGGCCR	4 cut(s)	238, 274, 321, 578
EagI	CGGCCG	1 cut(s)	238
EclXI	CGGCCG	1 cut(s)	238
Eco130I	CCWWGG	1 cut(s)	1233
Eco24I	GRGCYC	1 cut(s)	390
Eco31I	GGTCTC	2 cut(s)	566, 606
Eco32I	GATATC	2 cut(s)	420, 1224
Eco47I	GGWCC	2 cut(s)	493, 804
Eco52I	CGGCCG	1 cut(s)	238
Eco57I	CTGAAG	3 cut(s)	212, 669, 971
Eco72I	CACGTG	2 cut(s)	187, 752
Eco88I	CYCGRG	2 cut(s)	563, 609
EcoO109I	RGGNCCY	1 cut(s)	211
EcoRI	GAATTC	1 cut(s)	374
EcoRII	CCWGG	3 cut(s)	58, 829, 978
EcoRV	GATATC	2 cut(s)	420, 1224
EcoT14I	CCWWGG	1 cut(s)	1233
EcoT38I	GRGCYC	1 cut(s)	390
ErhI	CCWWGG	1 cut(s)	1233
FaeI	CATG	8 cut(s)	94, 184, 543, 589, 677, 728, 1025, 1159
FalI	AAGNNNNNCTT	2 cut(s)	1226, 1258
FaqI	GGGAC	1 cut(s)	1039
FatI	CATG	8 cut(s)	90, 180, 539, 585, 673, 724, 1021, 1155
FauNDI	CATATG	1 cut(s)	1218
FbaI	TGATCA	1 cut(s)	766
FblI	GTMKAC	1 cut(s)	1105
Fnu4HI	GCNGC	5 cut(s)	48, 241, 331, 912, 992
FokI	GGATG	3 cut(s)	5, 377, 1250
FriOI	GRGCYC	1 cut(s)	390
Fsp4HI	GCNGC	5 cut(s)	48, 241, 331, 912, 992
FspBI	CTAG	2 cut(s)	758, 1164
GlaI	GCGC	3 cut(s)	201, 680, 682
GluI	GCNGC	5 cut(s)	48, 241, 331, 912, 992
GsaI	CCCAGC	1 cut(s)	417
HaeIII	GGCC	7 cut(s)	43, 212, 240, 276, 323, 580, 625
HapII	CCGG	1 cut(s)	237
HgaI	GACGC	2 cut(s)	206, 983
HhaI	GCGC	3 cut(s)	202, 681, 683
Hin1II	CATG	8 cut(s)	94, 184, 543, 589, 677, 728, 1025, 1159
Hin6I	GCGC	3 cut(s)	200, 679, 681
HinP1I	GCGC	3 cut(s)	200, 679, 681
HincII	GTYRAC	1 cut(s)	10
HindII	GTYRAC	1 cut(s)	10
HinfI	GANTC	2 cut(s)	55, 1027
HpaII	CCGG	1 cut(s)	237
HphI	GGTGA	4 cut(s)	49, 106, 365, 635
Hpy166II	GTNNAC	5 cut(s)	10, 493, 699, 755, 1106
Hpy188I	TCNGA	8 cut(s)	23, 447, 508, 547, 666, 857, 1129, 1260
Hpy188III	TCNNGA	7 cut(s)	371, 379, 563, 770, 807, 1001, 1049
Hpy8I	GTNNAC	5 cut(s)	10, 493, 699, 755, 1106
HpyAV	CCTTC	5 cut(s)	187, 257, 795, 1136, 1141
HpyCH4III	ACNGT	3 cut(s)	34, 1008, 1194
HpyCH4IV	ACGT	4 cut(s)	12, 186, 695, 751
HpyF10VI	GCNNNNNNNGC	4 cut(s)	305, 314, 336, 746
HpyF3I	CTNAG	3 cut(s)	85, 203, 874
HpySE526I	ACGT	4 cut(s)	12, 186, 695, 751
Hsp92II	CATG	8 cut(s)	94, 184, 543, 589, 677, 728, 1025, 1159
HspAI	GCGC	3 cut(s)	200, 679, 681
KpnI	GGTACC	1 cut(s)	1163
KroI	GCCGGC	1 cut(s)	236
KroNI	GCCGGC	1 cut(s)	238
Ksp22I	TGATCA	1 cut(s)	766
Kzo9I	GATC	5 cut(s)	75, 447, 766, 883, 962
LmnI	GCTCC	1 cut(s)	305
Lsp1109I	GCAGC	4 cut(s)	59, 342, 898, 1003
LweI	GCATC	2 cut(s)	27, 1075
MabI	ACCWGGT	1 cut(s)	829
MaeI	CTAG	2 cut(s)	758, 1164
MaeII	ACGT	4 cut(s)	12, 186, 695, 751
MaeIII	GTNAC	3 cut(s)	66, 833, 1188
MalI	GATC	5 cut(s)	77, 449, 768, 885, 964
MboI	GATC	5 cut(s)	75, 447, 766, 883, 962
MboII	GAAGA	4 cut(s)	109, 414, 476, 950
MflI	RGATCY	2 cut(s)	75, 883
MhlI	GDGCHC	3 cut(s)	222, 390, 610
MluCI	AATT	6 cut(s)	169, 374, 573, 1070, 1110, 1131
MlyI	GAGTC	2 cut(s)	49, 1021
MroNI	GCCGGC	1 cut(s)	236
MseI	TTAA	1 cut(s)	1248
MslI	CAYNNNNRTG	1 cut(s)	185
MspA1I	CMGCKG	2 cut(s)	50, 413
MspI	CCGG	1 cut(s)	237
MspR9I	CCNGG	3 cut(s)	60, 831, 980
MvaI	CCWGG	3 cut(s)	60, 831, 980
MvnI	CGCG	3 cut(s)	200, 489, 681
MwoI	GCNNNNNNNGC	4 cut(s)	305, 314, 336, 746
NaeI	GCCGGC	1 cut(s)	238
NdeI	CATATG	1 cut(s)	1218
NdeII	GATC	5 cut(s)	75, 447, 766, 883, 962
NgoMIV	GCCGGC	1 cut(s)	236
NlaIII	CATG	8 cut(s)	94, 184, 543, 589, 677, 728, 1025, 1159
NlaIV	GGNNCC	3 cut(s)	307, 495, 1161
NmeAIII	GCCGAG	1 cut(s)	601
NmuCI	GTSAC	2 cut(s)	66, 1188
NspI	RCATGY	1 cut(s)	184
PaeR7I	CTCGAG	1 cut(s)	563
PauI	GCGCGC	1 cut(s)	679
PdiI	GCCGGC	1 cut(s)	238
PkrI	GCNGC	5 cut(s)	49, 242, 332, 913, 993
PleI	GAGTC	2 cut(s)	49, 1021
PmaCI	CACGTG	2 cut(s)	187, 752
PmlI	CACGTG	2 cut(s)	187, 752
PpsI	GAGTC	2 cut(s)	49, 1021
Ppu21I	YACGTR	2 cut(s)	187, 752
Psp1406I	AACGTT	2 cut(s)	12, 695
Psp6I	CCWGG	3 cut(s)	58, 829, 978
PspCI	CACGTG	2 cut(s)	187, 752
PspFI	CCCAGC	1 cut(s)	413
PspGI	CCWGG	3 cut(s)	58, 829, 978
PspN4I	GGNNCC	3 cut(s)	307, 495, 1161
PspPI	GGNCC	3 cut(s)	211, 493, 804
PstNI	CAGNNNCTG	1 cut(s)	1006
PsuI	RGATCY	2 cut(s)	75, 883
PteI	GCGCGC	1 cut(s)	679
PvuII	CAGCTG	1 cut(s)	413
RsaI	GTAC	1 cut(s)	1161
RsaNI	GTAC	1 cut(s)	1160
RseI	CAYNNNNRTG	1 cut(s)	185
SaqAI	TTAA	1 cut(s)	1248
SatI	GCNGC	5 cut(s)	48, 241, 331, 912, 992
Sau3AI	GATC	5 cut(s)	75, 447, 766, 883, 962
Sau96I	GGNCC	3 cut(s)	211, 493, 804
SchI	GAGTC	2 cut(s)	49, 1021
ScrFI	CCNGG	3 cut(s)	60, 831, 980
SduI	GDGCHC	3 cut(s)	222, 390, 610
SexAI	ACCWGGT	1 cut(s)	829
SfaNI	GCATC	2 cut(s)	27, 1075
Sfr274I	CTCGAG	1 cut(s)	563
SinI	GGWCC	2 cut(s)	493, 804
SlaI	CTCGAG	1 cut(s)	563
SmiMI	CAYNNNNRTG	1 cut(s)	185
SmlI	CTYRAG	2 cut(s)	563, 1049
SmoI	CTYRAG	2 cut(s)	563, 1049
Sse9I	AATT	6 cut(s)	169, 374, 573, 1070, 1110, 1131
SsiI	CCGC	2 cut(s)	50, 241
SspMI	CTAG	2 cut(s)	758, 1164
StyD4I	CCNGG	3 cut(s)	58, 829, 978
StyI	CCWWGG	1 cut(s)	1233
TaaI	ACNGT	3 cut(s)	34, 1008, 1194
TaiI	ACGT	4 cut(s)	15, 189, 698, 754
TaqI	TCGA	6 cut(s)	282, 288, 564, 893, 961, 972
TasI	AATT	6 cut(s)	169, 374, 573, 1070, 1110, 1131
TauI	GCSGC	1 cut(s)	243
Tru1I	TTAA	1 cut(s)	1248
Tru9I	TTAA	1 cut(s)	1248
TscAI	CASTG	2 cut(s)	39, 1197
TseFI	GTSAC	2 cut(s)	66, 1188
TseI	GCWGC	4 cut(s)	47, 330, 911, 991
Tsp45I	GTSAC	2 cut(s)	66, 1188
TspDTI	ATGAA	1 cut(s)	520
TspGWI	ACGGA	1 cut(s)	1105
TspRI	CASTG	2 cut(s)	39, 1197
VpaK11BI	GGWCC	2 cut(s)	493, 804
XapI	RAATTY	2 cut(s)	374, 1131
XceI	RCATGY	1 cut(s)	184
XhoI	CTCGAG	1 cut(s)	563
XmiI	GTMKAC	1 cut(s)	1105
XspI	CTAG	2 cut(s)	758, 1164

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.