Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Reverse (-)

90234272 .. 90235639

Gene Structure 1368 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG525900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1368 bp

ATGGCAGTCAACGTCAGCGTGAGGGAGTCGACGGTGGTGAAGCCAGCGGTGGAGACGCCTCGGCAATCGCTGTGGACGTCCAACTTGGACGCGATCAGTTTACAGGCTCATACTCCCACTGTTTACATCTACAAGCCAAAACACGGTGCAGACAGCTTCTTTGACCCGCGCGTGCTGAAGGACGCGCTCAGCAAGGCCCTCGTGCCCTTCTACCCCTTGGCCGGCCGCCTGAGGCAAAACAACGAGGACAAGAATGCTCGTATTGAAATCAATTGCAATGCTGAGGGCGTCTTGTTTGTTGTGGCCGATAGCACCTCCTGCGCCAATGATTTTGCAGATTTTAAGACCACTCTCGAGTTAGGGAGATGGCTCATCCCTGCAGTTGATTACTCCGCTGGGATATCTTCTTTTCCACTCTTCGTGGTTCAGGTCACATACCTAAAATGCGGTGGAGTTGCACTTGGTATTGGCTTTGAACACATCACAGCGGATGGGTTTGCTGCTCTCCACTTTGTAAAAGCATGGTCTGATATGGCTCGTGGTGTCGATTTGGCAATCCCACCAACCCTTGACAGGACAGTACTTCATGCACGAGACCCGCCTCAGCCTCTCCTCGACCACAACCACCATGTCGAATACCATCCTCCTCCATCAGTCACAAAAGCTGCCGCCGCTTCTGATCCCGATCATGAGACTGCTACAGTCTCCGTTTTCAAGTTCACGAGGGAGCAGATCAACATCTTGAAAGCTAAGTCCTTACCAACCAAGAAAAATGACGATGTTGATAATGGGAACTCATTAGTCAAGTACACTTCATATGAGGTCTTTGCAGCTCATGTATGGATATCTGCATGTAAGGCACGTGAACTTGCTGATGATCAAGAGACACAATTCCACATTGCCGCAAATGGACGGTCGAGATTGCAACCCCCACTCCCACCTGGTTACTTTGGTAATGTGATTTTCTCATGTGCACCAACTGCCCTAGCAGGGGACCTCATATCGAAACCGATGAGCTACGCTGCGAGTTGCATTCACAAGGCTTTGGTGCGTATGGACGATGAGTATCTCCGATCAGCCCTAGACTATCTTGAGCTTCAGCAGTCTCATCATCATCTGTCGAGCCTTGCTCGCGGAGCTCATTACTATAAGAGCCCTAATCTTGGGATAACTAGCTGGGTTACGTTGCCTATATATGATGCTGATTTTGGTTGGGGTCGACCAGTTTTCATGGGACGCGGTGGACTTTCACATGAAGGGAAGGCTTACTTGGTACCAAGTGCAAGTGATGATGGGAGTTTCTCACTGGGCATATCTCTGCAATCTCGGCATATGAAATCATTTTCTAAGTTGATTTACGACATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

455

Amino Acids

50.01

Weight (kDa)

6.54

Isoelectric Point (pI)

40.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	4 - 450	3.9e-100	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	80
Acc65I	GGTACC	1 cut(s)	1273
AccB1I	GGYRCC	1 cut(s)	1273
AccI	GTMKAC	2 cut(s)	29, 1219
AccII	CGCG	6 cut(s)	92, 169, 171, 185, 1134, 1239
AclWI	GGATC	1 cut(s)	674
AcoI	YGGCCR	3 cut(s)	219, 223, 303
AcuI	CTGAAG	2 cut(s)	197, 1082
AcvI	CACGTG	1 cut(s)	863
AcyI	GRCGYC	3 cut(s)	56, 77, 288
AfaI	GTAC	3 cut(s)	582, 809, 1275
AfiI	CCNNNNNNNGG	6 cut(s)	143, 221, 573, 990, 991, 1163
AgsI	TTSAA	4 cut(s)	266, 476, 715, 745
AjnI	CCWGG	1 cut(s)	940
AjuI	GAANNNNNNNTTGG	2 cut(s)	1253, 1285
AluBI	AGCT	8 cut(s)	156, 665, 749, 833, 1017, 1096, 1139, 1176
AluI	AGCT	8 cut(s)	156, 665, 749, 833, 1017, 1096, 1139, 1176
Alw21I	GWGCWC	2 cut(s)	976, 1141
Alw26I	GTCTC	6 cut(s)	47, 588, 686, 709, 878, 1110
Alw44I	GTGCAC	1 cut(s)	972
AlwI	GGATC	1 cut(s)	674
Ama87I	CYCGRG	1 cut(s)	353
AoxI	GGCC	4 cut(s)	195, 219, 223, 303
ApaLI	GTGCAC	1 cut(s)	972
ApeKI	GCWGC	4 cut(s)	500, 665, 830, 1022
ArsI	GACNNNNNNTTYG	4 cut(s)	143, 175, 899, 931
Asp718I	GGTACC	1 cut(s)	1273
AspLEI	GCGC	3 cut(s)	171, 187, 323
AspS9I	GGNCC	2 cut(s)	196, 994
AsuHPI	GGTGA	1 cut(s)	49
AvaI	CYCGRG	1 cut(s)	353
AvaII	GGWCC	1 cut(s)	994
AxyI	CCTNAGG	1 cut(s)	230
BaeGI	GKGCMC	2 cut(s)	207, 976
BanI	GGYRCC	1 cut(s)	1273
BanII	GRGCYC	2 cut(s)	1141, 1157
BauI	CACGAG	4 cut(s)	200, 537, 591, 721
BbrPI	CACGTG	1 cut(s)	863
Bbv12I	GWGCWC	2 cut(s)	976, 1141
BbvCI	CCTCAGC	2 cut(s)	282, 603
BbvI	GCAGC	4 cut(s)	487, 652, 842, 1009
BccI	CCATC	5 cut(s)	360, 485, 648, 658, 1286
BcgI	CGANNNNNNTGC	2 cut(s)	181, 215
BciT130I	CCWGG	1 cut(s)	942
BclI	TGATCA	1 cut(s)	877
BcoDI	GTCTC	6 cut(s)	47, 588, 686, 709, 878, 1110
BfaI	CTAG	3 cut(s)	986, 1082, 1173
BfmI	CTRYAG	2 cut(s)	378, 699
BisI	GCNGC	8 cut(s)	226, 501, 666, 669, 672, 831, 903, 1023
BlpI	GCTNAGC	1 cut(s)	188
BlsI	GCNGC	8 cut(s)	227, 502, 667, 670, 673, 832, 904, 1024
BmcAI	AGTACT	1 cut(s)	582
Bme1390I	CCNGG	1 cut(s)	942
Bme18I	GGWCC	1 cut(s)	994
BmeT110I	CYCGRG	1 cut(s)	353
BmgT120I	GGNCC	2 cut(s)	196, 994
BmiI	GGNNCC	2 cut(s)	995, 1275
BmrFI	CCNGG	1 cut(s)	942
BmrI	ACTGGG	1 cut(s)	1316
BmsI	GCATC	1 cut(s)	1189
BmuI	ACTGGG	1 cut(s)	1316
BplI	GAGNNNNNCTC	2 cut(s)	1114, 1146
Bpu10I	CCTNAGC	2 cut(s)	282, 603
Bpu1102I	GCTNAGC	1 cut(s)	188
BpuEI	CTTGAG	1 cut(s)	1112
BsaAI	YACGTR	1 cut(s)	863
BsaBI	GATNNNNATC	3 cut(s)	684, 737, 1065
BsaHI	GRCGYC	3 cut(s)	56, 77, 288
BsaI	GGTCTC	1 cut(s)	588
BsaJI	CCNNGG	2 cut(s)	59, 216
BsaXI	ACNNNNNCTCC	2 cut(s)	918, 948
Bsc4I	CCNNNNNNNGG	6 cut(s)	143, 221, 573, 990, 991, 1163
Bse118I	RCCGGY	1 cut(s)	221
Bse1I	ACTGG	2 cut(s)	1223, 1311
Bse21I	CCTNAGG	1 cut(s)	230
Bse3DI	GCAATG	2 cut(s)	283, 897
Bse8I	GATNNNNATC	3 cut(s)	684, 737, 1065
BseBI	CCWGG	1 cut(s)	942
BseDI	CCNNGG	2 cut(s)	59, 216
BseGI	GGATG	3 cut(s)	372, 496, 640
BseJI	GATNNNNATC	3 cut(s)	684, 737, 1065
BseLI	CCNNNNNNNGG	6 cut(s)	143, 221, 573, 990, 991, 1163
BseMI	GCAATG	2 cut(s)	283, 897
BseMII	CTCAG	4 cut(s)	202, 221, 273, 617
BseNI	ACTGG	2 cut(s)	1223, 1311
BseRI	GAGGAG	2 cut(s)	602, 636
BseSI	GKGCMC	2 cut(s)	207, 976
BseX3I	CGGCCG	1 cut(s)	223
BseXI	GCAGC	4 cut(s)	487, 652, 842, 1009
BseYI	CCCAGC	2 cut(s)	395, 1176
BsgI	GTGCAG	1 cut(s)	168
Bsh1236I	CGCG	6 cut(s)	92, 169, 171, 185, 1134, 1239
Bsh1285I	CGRYCG	2 cut(s)	226, 917
BshFI	GGCC	4 cut(s)	197, 221, 225, 305
BshNI	GGYRCC	1 cut(s)	1273
BsiEI	CGRYCG	2 cut(s)	226, 917
BsiHKAI	GWGCWC	2 cut(s)	976, 1141
BsiHKCI	CYCGRG	1 cut(s)	353
BsiSI	CCGG	1 cut(s)	222
BslFI	GGGAC	2 cut(s)	1007, 1248
BslI	CCNNNNNNNGG	6 cut(s)	143, 221, 573, 990, 991, 1163
BsmAI	GTCTC	6 cut(s)	47, 588, 686, 709, 878, 1110
BsmBI	CGTCTC	1 cut(s)	47
BsmFI	GGGAC	2 cut(s)	1007, 1248
BsmI	GAATGC	2 cut(s)	259, 1032
BsnI	GGCC	4 cut(s)	197, 221, 225, 305
Bso31I	GGTCTC	1 cut(s)	588
BsoBI	CYCGRG	1 cut(s)	353
Bsp1286I	GDGCHC	4 cut(s)	207, 976, 1141, 1157
Bsp143I	GATC	6 cut(s)	93, 679, 685, 732, 877, 1073
Bsp1720I	GCTNAGC	1 cut(s)	188
BspANI	GGCC	4 cut(s)	197, 221, 225, 305
BspCNI	CTCAG	4 cut(s)	201, 222, 274, 616
BspFNI	CGCG	6 cut(s)	92, 169, 171, 185, 1134, 1239
BspHI	TCATGA	1 cut(s)	688
BspLI	GGNNCC	2 cut(s)	995, 1275
BspMAI	CTGCAG	1 cut(s)	382
BspPI	GGATC	1 cut(s)	674
BspT107I	GGYRCC	1 cut(s)	1273
BspTNI	GGTCTC	1 cut(s)	588
BsrDI	GCAATG	2 cut(s)	283, 897
BsrFI	RCCGGY	1 cut(s)	221
BsrI	ACTGG	2 cut(s)	1223, 1311
BssAI	RCCGGY	1 cut(s)	221
BssECI	CCNNGG	2 cut(s)	59, 216
BssMI	GATC	6 cut(s)	93, 679, 685, 732, 877, 1073
BssNI	GRCGYC	3 cut(s)	56, 77, 288
BssSI	CACGAG	4 cut(s)	200, 537, 591, 721
BssT1I	CCWWGG	1 cut(s)	216
Bst2BI	CACGAG	4 cut(s)	200, 537, 591, 721
Bst2UI	CCWGG	1 cut(s)	942
Bst4CI	ACNGT	6 cut(s)	34, 121, 146, 580, 703, 915
Bst6I	CTCTTC	1 cut(s)	422
BstACI	GRCGYC	3 cut(s)	56, 77, 288
BstAPI	GCANNNNNTGC	2 cut(s)	318, 980
BstBAI	YACGTR	1 cut(s)	863
BstC8I	GCNNGC	4 cut(s)	45, 173, 223, 1132
BstDEI	CTNAG	6 cut(s)	188, 230, 282, 603, 750, 1347
BstF5I	GGATG	3 cut(s)	372, 496, 640
BstFNI	CGCG	6 cut(s)	92, 169, 171, 185, 1134, 1239
BstHHI	GCGC	3 cut(s)	171, 187, 323
BstKTI	GATC	6 cut(s)	96, 682, 688, 735, 880, 1076
BstMAI	GTCTC	6 cut(s)	47, 588, 686, 709, 878, 1110
BstMBI	GATC	6 cut(s)	93, 679, 685, 732, 877, 1073
BstMCI	CGRYCG	2 cut(s)	226, 917
BstMWI	GCNNNNNNNGC	7 cut(s)	318, 671, 857, 980, 1131, 1136, 1327
BstNI	CCWGG	1 cut(s)	942
BstNSI	RCATGY	1 cut(s)	855
BstSCI	CCNGG	1 cut(s)	940
BstSFI	CTRYAG	2 cut(s)	378, 699
BstSLI	GKGCMC	2 cut(s)	207, 976
BstUI	CGCG	6 cut(s)	92, 169, 171, 185, 1134, 1239
BstV1I	GCAGC	4 cut(s)	487, 652, 842, 1009
BstZI	CGGCCG	1 cut(s)	223
Bsu36I	CCTNAGG	1 cut(s)	230
BsuRI	GGCC	4 cut(s)	197, 221, 225, 305
BtsCI	GGATG	3 cut(s)	372, 496, 640
BtsIMutI	CAGTG	2 cut(s)	117, 1304
Cac8I	GCNNGC	4 cut(s)	45, 173, 223, 1132
CciI	TCATGA	1 cut(s)	688
CfoI	GCGC	3 cut(s)	171, 187, 323
Cfr10I	RCCGGY	1 cut(s)	221
Cfr13I	GGNCC	2 cut(s)	196, 994
CseI	GACGC	5 cut(s)	64, 98, 191, 277, 1245
CsiI	ACCWGGT	1 cut(s)	940
Csp6I	GTAC	3 cut(s)	581, 808, 1274
CspCI	CAANNNNNGTGG	2 cut(s)	53, 88
CviAII	CATG	9 cut(s)	522, 587, 629, 689, 836, 852, 969, 1231, 1253
CviQI	GTAC	3 cut(s)	581, 808, 1274
DdeI	CTNAG	6 cut(s)	188, 230, 282, 603, 750, 1347
DpnI	GATC	6 cut(s)	95, 681, 687, 734, 879, 1075
DpnII	GATC	6 cut(s)	93, 679, 685, 732, 877, 1073
EaeI	YGGCCR	3 cut(s)	219, 223, 303
EagI	CGGCCG	1 cut(s)	223
Eam1104I	CTCTTC	1 cut(s)	422
EarI	CTCTTC	1 cut(s)	422
Ecl136II	GAGCTC	1 cut(s)	1139
EclXI	CGGCCG	1 cut(s)	223
Eco130I	CCWWGG	1 cut(s)	216
Eco24I	GRGCYC	2 cut(s)	1141, 1157
Eco31I	GGTCTC	1 cut(s)	588
Eco32I	GATATC	2 cut(s)	402, 846
Eco47I	GGWCC	1 cut(s)	994
Eco52I	CGGCCG	1 cut(s)	223
Eco53kI	GAGCTC	1 cut(s)	1139
Eco57I	CTGAAG	2 cut(s)	197, 1082
Eco72I	CACGTG	1 cut(s)	863
Eco81I	CCTNAGG	1 cut(s)	230
Eco88I	CYCGRG	1 cut(s)	353
EcoICRI	GAGCTC	1 cut(s)	1139
EcoO109I	RGGNCCY	2 cut(s)	196, 994
EcoRII	CCWGG	1 cut(s)	940
EcoRV	GATATC	2 cut(s)	402, 846
EcoT14I	CCWWGG	1 cut(s)	216
EcoT38I	GRGCYC	2 cut(s)	1141, 1157
ErhI	CCWWGG	1 cut(s)	216
Esp3I	CGTCTC	1 cut(s)	47
FaeI	CATG	9 cut(s)	525, 590, 632, 692, 839, 855, 972, 1234, 1256
FalI	AAGNNNNNCTT	2 cut(s)	1253, 1285
FaqI	GGGAC	2 cut(s)	1007, 1248
FatI	CATG	9 cut(s)	521, 586, 628, 688, 835, 851, 968, 1230, 1252
FauI	CCCGC	2 cut(s)	174, 606
FauNDI	CATATG	2 cut(s)	817, 1332
FbaI	TGATCA	1 cut(s)	877
FblI	GTMKAC	2 cut(s)	29, 1219
Fnu4HI	GCNGC	8 cut(s)	226, 501, 666, 669, 672, 831, 903, 1023
FokI	GGATG	3 cut(s)	359, 503, 627
FriOI	GRGCYC	2 cut(s)	1141, 1157
FseI	GGCCGGCC	1 cut(s)	225
Fsp4HI	GCNGC	8 cut(s)	226, 501, 666, 669, 672, 831, 903, 1023
FspBI	CTAG	3 cut(s)	986, 1082, 1173
GlaI	GCGC	3 cut(s)	170, 186, 322
GluI	GCNGC	8 cut(s)	226, 501, 666, 669, 672, 831, 903, 1023
GsaI	CCCAGC	2 cut(s)	399, 1180
HaeIII	GGCC	4 cut(s)	197, 221, 225, 305
HapII	CCGG	1 cut(s)	222
HgaI	GACGC	5 cut(s)	64, 98, 191, 277, 1245
HhaI	GCGC	3 cut(s)	171, 187, 323
Hin1I	GRCGYC	3 cut(s)	56, 77, 288
Hin1II	CATG	9 cut(s)	525, 590, 632, 692, 839, 855, 972, 1234, 1256
Hin6I	GCGC	3 cut(s)	169, 185, 321
HinP1I	GCGC	3 cut(s)	169, 185, 321
HincII	GTYRAC	3 cut(s)	10, 30, 1220
HindII	GTYRAC	3 cut(s)	10, 30, 1220
HinfI	GANTC	1 cut(s)	26
HpaII	CCGG	1 cut(s)	222
HphI	GGTGA	1 cut(s)	49
Hpy188I	TCNGA	4 cut(s)	529, 679, 1073, 1367
Hpy188III	TCNNGA	8 cut(s)	353, 683, 689, 721, 742, 881, 918, 1091
Hpy99I	CGWCG	1 cut(s)	34
HpyAV	CCTTC	4 cut(s)	172, 217, 1250, 1255
HpyCH4III	ACNGT	6 cut(s)	34, 121, 146, 580, 703, 915
HpyCH4IV	ACGT	4 cut(s)	12, 77, 862, 1184
HpyF10VI	GCNNNNNNNGC	7 cut(s)	318, 671, 857, 980, 1131, 1136, 1327
HpyF3I	CTNAG	6 cut(s)	188, 230, 282, 603, 750, 1347
HpySE526I	ACGT	4 cut(s)	12, 77, 862, 1184
Hsp92I	GRCGYC	3 cut(s)	56, 77, 288
Hsp92II	CATG	9 cut(s)	525, 590, 632, 692, 839, 855, 972, 1234, 1256
HspAI	GCGC	3 cut(s)	169, 185, 321
KpnI	GGTACC	1 cut(s)	1277
KroI	GCCGGC	1 cut(s)	221
KroNI	GCCGGC	1 cut(s)	223
Ksp22I	TGATCA	1 cut(s)	877
Kzo9I	GATC	6 cut(s)	93, 679, 685, 732, 877, 1073
LmnI	GCTCC	2 cut(s)	727, 1136
Lsp1109I	GCAGC	4 cut(s)	487, 652, 842, 1009
LweI	GCATC	1 cut(s)	1189
MabI	ACCWGGT	1 cut(s)	940
MaeI	CTAG	3 cut(s)	986, 1082, 1173
MaeII	ACGT	4 cut(s)	12, 77, 862, 1184
MaeIII	GTNAC	4 cut(s)	430, 655, 944, 1180
MalI	GATC	6 cut(s)	95, 681, 687, 734, 879, 1075
MboI	GATC	6 cut(s)	93, 679, 685, 732, 877, 1073
MboII	GAAGA	2 cut(s)	396, 409
MfeI	CAATTG	1 cut(s)	271
MhlI	GDGCHC	4 cut(s)	207, 976, 1141, 1157
MluCI	AATT	2 cut(s)	271, 890
MlyI	GAGTC	1 cut(s)	35
MmeI	TCCRAC	1 cut(s)	105
MroNI	GCCGGC	1 cut(s)	221
MseI	TTAA	1 cut(s)	342
MspA1I	CMGCKG	3 cut(s)	47, 395, 488
MspI	CCGG	1 cut(s)	222
MspR9I	CCNGG	1 cut(s)	942
MunI	CAATTG	1 cut(s)	271
Mva1269I	GAATGC	2 cut(s)	259, 1032
MvaI	CCWGG	1 cut(s)	942
MvnI	CGCG	6 cut(s)	92, 169, 171, 185, 1134, 1239
MwoI	GCNNNNNNNGC	7 cut(s)	318, 671, 857, 980, 1131, 1136, 1327
NaeI	GCCGGC	1 cut(s)	223
NdeI	CATATG	2 cut(s)	817, 1332
NdeII	GATC	6 cut(s)	93, 679, 685, 732, 877, 1073
NgoMIV	GCCGGC	1 cut(s)	221
NlaIII	CATG	9 cut(s)	525, 590, 632, 692, 839, 855, 972, 1234, 1256
NlaIV	GGNNCC	2 cut(s)	995, 1275
NmeAIII	GCCGAG	2 cut(s)	40, 1306
NmuCI	GTSAC	2 cut(s)	430, 655
NspI	RCATGY	1 cut(s)	855
PaeR7I	CTCGAG	1 cut(s)	353
PagI	TCATGA	1 cut(s)	688
PcsI	WCGNNNNNNNCGW	1 cut(s)	74
PctI	GAATGC	2 cut(s)	259, 1032
PdiI	GCCGGC	1 cut(s)	223
PkrI	GCNGC	8 cut(s)	227, 502, 667, 670, 673, 832, 904, 1024
PleI	GAGTC	1 cut(s)	34
PmaCI	CACGTG	1 cut(s)	863
PmlI	CACGTG	1 cut(s)	863
PpsI	GAGTC	1 cut(s)	34
Ppu21I	YACGTR	1 cut(s)	863
PpuMI	RGGWCCY	1 cut(s)	994
Psp124BI	GAGCTC	1 cut(s)	1141
Psp5II	RGGWCCY	1 cut(s)	994
Psp6I	CCWGG	1 cut(s)	940
PspCI	CACGTG	1 cut(s)	863
PspFI	CCCAGC	2 cut(s)	395, 1176
PspGI	CCWGG	1 cut(s)	940
PspN4I	GGNNCC	2 cut(s)	995, 1275
PspPI	GGNCC	2 cut(s)	196, 994
PspPPI	RGGWCCY	1 cut(s)	994
PstI	CTGCAG	1 cut(s)	382
RigI	GGCCGGCC	1 cut(s)	225
RsaI	GTAC	3 cut(s)	582, 809, 1275
RsaNI	GTAC	3 cut(s)	581, 808, 1274
SacI	GAGCTC	1 cut(s)	1141
SalI	GTCGAC	2 cut(s)	28, 1218
SaqAI	TTAA	1 cut(s)	342
SatI	GCNGC	8 cut(s)	226, 501, 666, 669, 672, 831, 903, 1023
Sau3AI	GATC	6 cut(s)	93, 679, 685, 732, 877, 1073
Sau96I	GGNCC	2 cut(s)	196, 994
ScaI	AGTACT	1 cut(s)	582
SchI	GAGTC	1 cut(s)	35
ScrFI	CCNGG	1 cut(s)	942
SduI	GDGCHC	4 cut(s)	207, 976, 1141, 1157
SexAI	ACCWGGT	1 cut(s)	940
SfaNI	GCATC	1 cut(s)	1189
SfcI	CTRYAG	2 cut(s)	378, 699
Sfr274I	CTCGAG	1 cut(s)	353
SinI	GGWCC	1 cut(s)	994
SlaI	CTCGAG	1 cut(s)	353
SmlI	CTYRAG	2 cut(s)	353, 1091
SmoI	CTYRAG	2 cut(s)	353, 1091
Sse9I	AATT	2 cut(s)	271, 890
SspMI	CTAG	3 cut(s)	986, 1082, 1173
SstI	GAGCTC	1 cut(s)	1141
StyD4I	CCNGG	1 cut(s)	940
StyI	CCWWGG	1 cut(s)	216
TaaI	ACNGT	6 cut(s)	34, 121, 146, 580, 703, 915
TaiI	ACGT	4 cut(s)	15, 80, 865, 1187
TaqI	TCGA	9 cut(s)	29, 354, 546, 615, 633, 917, 1004, 1121, 1219
TasI	AATT	2 cut(s)	271, 890
TatI	WGTACW	2 cut(s)	580, 807
TauI	GCSGC	4 cut(s)	228, 671, 674, 905
Tru1I	TTAA	1 cut(s)	342
Tru9I	TTAA	1 cut(s)	342
TscAI	CASTG	2 cut(s)	124, 1311
TseFI	GTSAC	2 cut(s)	430, 655
TseI	GCWGC	4 cut(s)	500, 665, 830, 1022
Tsp45I	GTSAC	2 cut(s)	430, 655
TspDTI	ATGAA	5 cut(s)	575, 804, 1219, 1269, 1349
TspGWI	ACGGA	1 cut(s)	697
TspRI	CASTG	2 cut(s)	124, 1311
VneI	GTGCAC	1 cut(s)	972
VpaK11BI	GGWCC	1 cut(s)	994
XceI	RCATGY	1 cut(s)	855
XhoI	CTCGAG	1 cut(s)	353
XmiI	GTMKAC	2 cut(s)	29, 1219
XspI	CTAG	3 cut(s)	986, 1082, 1173
ZraI	GACGTC	1 cut(s)	78
ZrmI	AGTACT	1 cut(s)	582

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.