Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000432.1

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Forward (+)

393290 .. 394766

Gene Structure 1477 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000432.1_g000114.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1365 bp

atggcagtcaacgttagcgtgagggagtcgacggtggtgaagccagcggtggagacacctcggcagtcgttgtggatgtccaacttggacatgatcagtccaaatgctcatactcccactgtttatatctacaagccaaaagatggcgcagacagcttctttgatccgcgcgtgctgaaggacgcgctcagcaaggccctagtgtctttctaccccttggccggccgtctgaggcaaaacaacgaggacaagaatgctcgtattgaaatcaattgcaatgctgagggcgtcttgtttgttgtggccgatagcagctcctgcgctgatgattttgccgattttaagaccactcttgagttagggagatggctcatccctcaggttgactactccgcagggatatcttcttttccactcttcgtggtgcaggtcacatacctgaaatgcggtggagttgcacttggacattacttcgtgcccgagacccgcctcagcctctcctcgatcacaaccaccatcgcgaataccatcctatgtggtatcgacttggcaatcccaccaaccctcgacaggacattacttcgtgcccgagacccgcctcagcctctcctcgatcacaaccaccatcgcgaataccatcctactccatcggtcacaaaagccgccgctgcttctgatcccgatcatgagccggctactgtctctgttttcaagttcacaagggagcagatcaacatcttgaaagctaagtccttaacaaccaagaaagatgacgatgttgataacgggaactccttcgttaagtacacttcgtatgaggtctttgcagctcatgtatggagatctgcatgcaaggcacgtgaacttgctgatgatcaagagacacaattccacattaccgcaaatggacggtcgagattgcaacctccactcccacctggttactttggtaatgtgattttctcatgtgcaccaactgccctagcaggggacctcatatcggaaccgatgagctacgctgcgagctgcattcacaaggctttggtgcgtatggatgatgagtatctccgatcagccctcgactatcttgagcttcagcagtctcatcatcatctgtcgagctttgctcgcggagctcattactataagagccctaatcttgggataactagctgggttacgttgcctatatatgatgctgattttggttggggtcgaccagttttcatgggacgcggtggactttcacatgaagggaaggcttacatggtaccaagtgcaagtgatgatgggagtttctcactgggaatttctctgcaatctcggcatatgaaatcattttctaagttgatttacgacatctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

454

Amino Acids

50.24

Weight (kDa)

6.34

Isoelectric Point (pI)

47.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	418
Acc65I	GGTACC	1 cut(s)	1270
AccB1I	GGYRCC	1 cut(s)	1270
AccB7I	CCANNNNNTGG	1 cut(s)	143
AccI	GTMKAC	2 cut(s)	29, 1216
AccII	CGCG	7 cut(s)	169, 171, 185, 521, 630, 1131, 1236
AclI	AACGTT	1 cut(s)	12
AclWI	GGATC	2 cut(s)	158, 671
AcoI	YGGCCR	3 cut(s)	219, 223, 303
AcsI	RAATTY	1 cut(s)	1308
AcuI	CTGAAG	2 cut(s)	197, 1079
AcvI	CACGTG	1 cut(s)	860
AcyI	GRCGYC	1 cut(s)	288
AfaI	GTAC	2 cut(s)	806, 1272
AfiI	CCNNNNNNNGG	7 cut(s)	143, 221, 570, 987, 988, 1000, 1160
AgsI	TTSAA	3 cut(s)	266, 712, 742
AjnI	CCWGG	1 cut(s)	937
Alw21I	GWGCWC	2 cut(s)	973, 1138
Alw26I	GTCTC	6 cut(s)	47, 476, 585, 706, 875, 1107
Alw44I	GTGCAC	1 cut(s)	969
AlwI	GGATC	2 cut(s)	158, 671
AlwNI	CAGNNNCTG	1 cut(s)	318
Ama87I	CYCGRG	2 cut(s)	479, 588
AoxI	GGCC	4 cut(s)	195, 219, 223, 303
ApaLI	GTGCAC	1 cut(s)	969
ApeKI	GCWGC	5 cut(s)	312, 668, 827, 1019, 1026
ApoI	RAATTY	1 cut(s)	1308
ArsI	GACNNNNNNTTYG	4 cut(s)	143, 175, 896, 928
Asp700I	GAANNNNTTC	1 cut(s)	794
Asp718I	GGTACC	1 cut(s)	1270
AspLEI	GCGC	4 cut(s)	149, 171, 187, 323
AspS9I	GGNCC	2 cut(s)	196, 991
AsuHPI	GGTGA	1 cut(s)	49
AvaI	CYCGRG	2 cut(s)	479, 588
AvaII	GGWCC	1 cut(s)	991
AxyI	CCTNAGG	1 cut(s)	378
BaeGI	GKGCMC	3 cut(s)	480, 589, 973
BanI	GGYRCC	1 cut(s)	1270
BanII	GRGCYC	2 cut(s)	1138, 1154
BbrPI	CACGTG	1 cut(s)	860
Bbv12I	GWGCWC	2 cut(s)	973, 1138
BbvCI	CCTCAGC	3 cut(s)	282, 491, 600
BbvI	GCAGC	5 cut(s)	324, 655, 839, 1006, 1013
BccI	CCATC	8 cut(s)	137, 360, 524, 536, 633, 645, 655, 1283
BceAI	ACGGC	1 cut(s)	210
BciT130I	CCWGG	1 cut(s)	939
BclI	TGATCA	2 cut(s)	93, 874
BcoDI	GTCTC	6 cut(s)	47, 476, 585, 706, 875, 1107
BfaI	CTAG	3 cut(s)	200, 983, 1170
BfuAI	ACCTGC	1 cut(s)	418
BglII	AGATCT	1 cut(s)	842
BisI	GCNGC	7 cut(s)	313, 663, 666, 669, 828, 1020, 1027
BlpI	GCTNAGC	1 cut(s)	188
BlsI	GCNGC	7 cut(s)	314, 664, 667, 670, 829, 1021, 1028
Bme1390I	CCNGG	1 cut(s)	939
Bme18I	GGWCC	1 cut(s)	991
BmeT110I	CYCGRG	2 cut(s)	479, 588
BmgT120I	GGNCC	2 cut(s)	196, 991
BmiI	GGNNCC	3 cut(s)	992, 1005, 1272
BmrFI	CCNGG	1 cut(s)	939
BmrI	ACTGGG	1 cut(s)	1313
BmsI	GCATC	1 cut(s)	1186
BmuI	ACTGGG	1 cut(s)	1313
BplI	GAGNNNNNCTC	2 cut(s)	1111, 1143
Bpu10I	CCTNAGC	3 cut(s)	282, 491, 600
Bpu1102I	GCTNAGC	1 cut(s)	188
BpuEI	CTTGAG	2 cut(s)	374, 1109
BsaAI	YACGTR	1 cut(s)	860
BsaBI	GATNNNNATC	3 cut(s)	681, 734, 1062
BsaHI	GRCGYC	1 cut(s)	288
BsaI	GGTCTC	2 cut(s)	476, 585
BsaJI	CCNNGG	2 cut(s)	59, 216
BsaXI	ACNNNNNCTCC	4 cut(s)	776, 806, 915, 945
Bsc4I	CCNNNNNNNGG	7 cut(s)	143, 221, 570, 987, 988, 1000, 1160
Bse118I	RCCGGY	2 cut(s)	221, 691
Bse1I	ACTGG	2 cut(s)	1220, 1308
Bse21I	CCTNAGG	1 cut(s)	378
Bse3DI	GCAATG	1 cut(s)	283
Bse8I	GATNNNNATC	3 cut(s)	681, 734, 1062
BseBI	CCWGG	1 cut(s)	939
BseDI	CCNNGG	2 cut(s)	59, 216
BseGI	GGATG	5 cut(s)	81, 372, 528, 637, 1060
BseJI	GATNNNNATC	3 cut(s)	681, 734, 1062
BseLI	CCNNNNNNNGG	7 cut(s)	143, 221, 570, 987, 988, 1000, 1160
BseMI	GCAATG	1 cut(s)	283
BseMII	CTCAG	6 cut(s)	202, 221, 273, 392, 505, 614
BseNI	ACTGG	2 cut(s)	1220, 1308
BseRI	GAGGAG	2 cut(s)	490, 599
BseSI	GKGCMC	3 cut(s)	480, 589, 973
BseX3I	CGGCCG	1 cut(s)	223
BseXI	GCAGC	5 cut(s)	324, 655, 839, 1006, 1013
BseYI	CCCAGC	1 cut(s)	1173
BsgI	GTGCAG	1 cut(s)	446
Bsh1236I	CGCG	7 cut(s)	169, 171, 185, 521, 630, 1131, 1236
Bsh1285I	CGRYCG	2 cut(s)	226, 914
BshFI	GGCC	4 cut(s)	197, 221, 225, 305
BshNI	GGYRCC	1 cut(s)	1270
BsiEI	CGRYCG	2 cut(s)	226, 914
BsiHKAI	GWGCWC	2 cut(s)	973, 1138
BsiHKCI	CYCGRG	2 cut(s)	479, 588
BsiSI	CCGG	2 cut(s)	222, 692
BslFI	GGGAC	2 cut(s)	1004, 1245
BslI	CCNNNNNNNGG	7 cut(s)	143, 221, 570, 987, 988, 1000, 1160
BsmAI	GTCTC	6 cut(s)	47, 476, 585, 706, 875, 1107
BsmFI	GGGAC	2 cut(s)	1004, 1245
BsmI	GAATGC	2 cut(s)	259, 1029
BsnI	GGCC	4 cut(s)	197, 221, 225, 305
Bso31I	GGTCTC	2 cut(s)	476, 585
BsoBI	CYCGRG	2 cut(s)	479, 588
Bsp1286I	GDGCHC	5 cut(s)	480, 589, 973, 1138, 1154
Bsp1720I	GCTNAGC	1 cut(s)	188
Bsp68I	TCGCGA	2 cut(s)	521, 630
BspANI	GGCC	4 cut(s)	197, 221, 225, 305
BspCNI	CTCAG	6 cut(s)	201, 222, 274, 391, 504, 613
BspFNI	CGCG	7 cut(s)	169, 171, 185, 521, 630, 1131, 1236
BspHI	TCATGA	1 cut(s)	685
BspLI	GGNNCC	3 cut(s)	992, 1005, 1272
BspMI	ACCTGC	1 cut(s)	418
BspPI	GGATC	2 cut(s)	158, 671
BspT107I	GGYRCC	1 cut(s)	1270
BspTNI	GGTCTC	2 cut(s)	476, 585
BsrDI	GCAATG	1 cut(s)	283
BsrFI	RCCGGY	2 cut(s)	221, 691
BsrI	ACTGG	2 cut(s)	1220, 1308
BssAI	RCCGGY	2 cut(s)	221, 691
BssECI	CCNNGG	2 cut(s)	59, 216
BssNI	GRCGYC	1 cut(s)	288
BssT1I	CCWWGG	1 cut(s)	216
Bst2UI	CCWGG	1 cut(s)	939
Bst4CI	ACNGT	4 cut(s)	34, 121, 700, 912
Bst6I	CTCTTC	1 cut(s)	422
BstACI	GRCGYC	1 cut(s)	288
BstAPI	GCANNNNNTGC	2 cut(s)	318, 977
BstBAI	YACGTR	1 cut(s)	860
BstC8I	GCNNGC	7 cut(s)	45, 173, 223, 693, 850, 1024, 1129
BstDEI	CTNAG	8 cut(s)	188, 230, 282, 378, 491, 600, 747, 1344
BstF5I	GGATG	5 cut(s)	81, 372, 528, 637, 1060
BstFNI	CGCG	7 cut(s)	169, 171, 185, 521, 630, 1131, 1236
BstHHI	GCGC	4 cut(s)	149, 171, 187, 323
BstMAI	GTCTC	6 cut(s)	47, 476, 585, 706, 875, 1107
BstMCI	CGRYCG	2 cut(s)	226, 914
BstMWI	GCNNNNNNNGC	8 cut(s)	153, 318, 668, 854, 977, 1128, 1133, 1324
BstNI	CCWGG	1 cut(s)	939
BstNSI	RCATGY	1 cut(s)	852
BstSCI	CCNGG	1 cut(s)	937
BstSLI	GKGCMC	3 cut(s)	480, 589, 973
BstUI	CGCG	7 cut(s)	169, 171, 185, 521, 630, 1131, 1236
BstV1I	GCAGC	5 cut(s)	324, 655, 839, 1006, 1013
BstX2I	RGATCY	1 cut(s)	842
BstYI	RGATCY	1 cut(s)	842
BstZI	CGGCCG	1 cut(s)	223
Bsu36I	CCTNAGG	1 cut(s)	378
BsuRI	GGCC	4 cut(s)	197, 221, 225, 305
BtgZI	GCGATG	2 cut(s)	502, 611
BtsCI	GGATG	5 cut(s)	81, 372, 528, 637, 1060
BtsIMutI	CAGTG	2 cut(s)	117, 1301
BtuMI	TCGCGA	2 cut(s)	521, 630
BveI	ACCTGC	1 cut(s)	418
Cac8I	GCNNGC	7 cut(s)	45, 173, 223, 693, 850, 1024, 1129
CaiI	CAGNNNCTG	1 cut(s)	318
CciI	TCATGA	1 cut(s)	685
CfoI	GCGC	4 cut(s)	149, 171, 187, 323
Cfr10I	RCCGGY	2 cut(s)	221, 691
Cfr13I	GGNCC	2 cut(s)	196, 991
CseI	GACGC	3 cut(s)	191, 277, 1242
CsiI	ACCWGGT	1 cut(s)	937
Csp6I	GTAC	2 cut(s)	805, 1271
CviAII	CATG	8 cut(s)	91, 686, 833, 849, 966, 1228, 1250, 1267
CviQI	GTAC	2 cut(s)	805, 1271
DdeI	CTNAG	8 cut(s)	188, 230, 282, 378, 491, 600, 747, 1344
EaeI	YGGCCR	3 cut(s)	219, 223, 303
EagI	CGGCCG	1 cut(s)	223
Eam1104I	CTCTTC	1 cut(s)	422
EarI	CTCTTC	1 cut(s)	422
Ecl136II	GAGCTC	1 cut(s)	1136
EclXI	CGGCCG	1 cut(s)	223
Eco130I	CCWWGG	1 cut(s)	216
Eco24I	GRGCYC	2 cut(s)	1138, 1154
Eco31I	GGTCTC	2 cut(s)	476, 585
Eco32I	GATATC	1 cut(s)	402
Eco47I	GGWCC	1 cut(s)	991
Eco52I	CGGCCG	1 cut(s)	223
Eco53kI	GAGCTC	1 cut(s)	1136
Eco57I	CTGAAG	2 cut(s)	197, 1079
Eco72I	CACGTG	1 cut(s)	860
Eco81I	CCTNAGG	1 cut(s)	378
Eco88I	CYCGRG	2 cut(s)	479, 588
EcoICRI	GAGCTC	1 cut(s)	1136
EcoO109I	RGGNCCY	2 cut(s)	196, 991
EcoRII	CCWGG	1 cut(s)	937
EcoRV	GATATC	1 cut(s)	402
EcoT14I	CCWWGG	1 cut(s)	216
EcoT38I	GRGCYC	2 cut(s)	1138, 1154
ErhI	CCWWGG	1 cut(s)	216
FaeI	CATG	8 cut(s)	94, 689, 836, 852, 969, 1231, 1253, 1270
FaqI	GGGAC	2 cut(s)	1004, 1245
FatI	CATG	8 cut(s)	90, 685, 832, 848, 965, 1227, 1249, 1266
FauI	CCCGC	2 cut(s)	494, 603
FauNDI	CATATG	1 cut(s)	1329
FbaI	TGATCA	2 cut(s)	93, 874
FblI	GTMKAC	2 cut(s)	29, 1216
Fnu4HI	GCNGC	7 cut(s)	313, 663, 666, 669, 828, 1020, 1027
FokI	GGATG	5 cut(s)	88, 359, 515, 624, 1067
FriOI	GRGCYC	2 cut(s)	1138, 1154
FseI	GGCCGGCC	1 cut(s)	225
Fsp4HI	GCNGC	7 cut(s)	313, 663, 666, 669, 828, 1020, 1027
FspBI	CTAG	3 cut(s)	200, 983, 1170
GlaI	GCGC	4 cut(s)	148, 170, 186, 322
GluI	GCNGC	7 cut(s)	313, 663, 666, 669, 828, 1020, 1027
GsaI	CCCAGC	1 cut(s)	1177
HaeIII	GGCC	4 cut(s)	197, 221, 225, 305
HapII	CCGG	2 cut(s)	222, 692
HgaI	GACGC	3 cut(s)	191, 277, 1242
HhaI	GCGC	4 cut(s)	149, 171, 187, 323
Hin1I	GRCGYC	1 cut(s)	288
Hin1II	CATG	8 cut(s)	94, 689, 836, 852, 969, 1231, 1253, 1270
Hin6I	GCGC	4 cut(s)	147, 169, 185, 321
HinP1I	GCGC	4 cut(s)	147, 169, 185, 321
HincII	GTYRAC	4 cut(s)	10, 30, 385, 1217
HindII	GTYRAC	4 cut(s)	10, 30, 385, 1217
HinfI	GANTC	1 cut(s)	26
HpaII	CCGG	2 cut(s)	222, 692
HphI	GGTGA	1 cut(s)	49
Hpy166II	GTNNAC	9 cut(s)	10, 30, 385, 717, 807, 863, 971, 1217, 1241
Hpy188I	TCNGA	5 cut(s)	231, 676, 1003, 1070, 1364
Hpy188III	TCNNGA	9 cut(s)	353, 520, 629, 680, 686, 739, 878, 915, 1088
Hpy8I	GTNNAC	9 cut(s)	10, 30, 385, 717, 807, 863, 971, 1217, 1241
Hpy99I	CGWCG	1 cut(s)	34
HpyAV	CCTTC	4 cut(s)	172, 805, 1247, 1252
HpyCH4III	ACNGT	4 cut(s)	34, 121, 700, 912
HpyCH4IV	ACGT	3 cut(s)	12, 859, 1181
HpyF10VI	GCNNNNNNNGC	8 cut(s)	153, 318, 668, 854, 977, 1128, 1133, 1324
HpyF3I	CTNAG	8 cut(s)	188, 230, 282, 378, 491, 600, 747, 1344
HpySE526I	ACGT	3 cut(s)	12, 859, 1181
Hsp92I	GRCGYC	1 cut(s)	288
Hsp92II	CATG	8 cut(s)	94, 689, 836, 852, 969, 1231, 1253, 1270
HspAI	GCGC	4 cut(s)	147, 169, 185, 321
KpnI	GGTACC	1 cut(s)	1274
KroI	GCCGGC	2 cut(s)	221, 691
KroNI	GCCGGC	2 cut(s)	223, 693
Ksp22I	TGATCA	2 cut(s)	93, 874
LmnI	GCTCC	3 cut(s)	320, 724, 1133
Lsp1109I	GCAGC	5 cut(s)	324, 655, 839, 1006, 1013
LweI	GCATC	1 cut(s)	1186
MabI	ACCWGGT	1 cut(s)	937
MaeI	CTAG	3 cut(s)	200, 983, 1170
MaeII	ACGT	3 cut(s)	12, 859, 1181
MaeIII	GTNAC	4 cut(s)	430, 652, 941, 1177
MboII	GAAGA	2 cut(s)	396, 409
MfeI	CAATTG	1 cut(s)	271
MflI	RGATCY	1 cut(s)	842
MhlI	GDGCHC	5 cut(s)	480, 589, 973, 1138, 1154
MluCI	AATT	3 cut(s)	271, 887, 1308
MlyI	GAGTC	1 cut(s)	35
MmeI	TCCRAC	1 cut(s)	105
MroNI	GCCGGC	2 cut(s)	221, 691
MroXI	GAANNNNTTC	1 cut(s)	794
MseI	TTAA	3 cut(s)	342, 755, 801
MspA1I	CMGCKG	2 cut(s)	47, 668
MspI	CCGG	2 cut(s)	222, 692
MspR9I	CCNGG	1 cut(s)	939
MunI	CAATTG	1 cut(s)	271
Mva1269I	GAATGC	2 cut(s)	259, 1029
MvaI	CCWGG	1 cut(s)	939
MvnI	CGCG	7 cut(s)	169, 171, 185, 521, 630, 1131, 1236
MwoI	GCNNNNNNNGC	8 cut(s)	153, 318, 668, 854, 977, 1128, 1133, 1324
NaeI	GCCGGC	2 cut(s)	223, 693
NdeI	CATATG	1 cut(s)	1329
NgoMIV	GCCGGC	2 cut(s)	221, 691
NlaIII	CATG	8 cut(s)	94, 689, 836, 852, 969, 1231, 1253, 1270
NlaIV	GGNNCC	3 cut(s)	992, 1005, 1272
NmeAIII	GCCGAG	2 cut(s)	40, 1303
NmuCI	GTSAC	2 cut(s)	430, 652
NruI	TCGCGA	2 cut(s)	521, 630
NspI	RCATGY	1 cut(s)	852
PaeI	GCATGC	1 cut(s)	852
PagI	TCATGA	1 cut(s)	685
PctI	GAATGC	2 cut(s)	259, 1029
PdiI	GCCGGC	2 cut(s)	223, 693
PdmI	GAANNNNTTC	1 cut(s)	794
PflMI	CCANNNNNTGG	1 cut(s)	143
PkrI	GCNGC	7 cut(s)	314, 664, 667, 670, 829, 1021, 1028
PleI	GAGTC	1 cut(s)	34
PmaCI	CACGTG	1 cut(s)	860
PmlI	CACGTG	1 cut(s)	860
PpsI	GAGTC	1 cut(s)	34
Ppu21I	YACGTR	1 cut(s)	860
PpuMI	RGGWCCY	1 cut(s)	991
Psp124BI	GAGCTC	1 cut(s)	1138
Psp1406I	AACGTT	1 cut(s)	12
Psp5II	RGGWCCY	1 cut(s)	991
Psp6I	CCWGG	1 cut(s)	937
PspCI	CACGTG	1 cut(s)	860
PspFI	CCCAGC	1 cut(s)	1173
PspGI	CCWGG	1 cut(s)	937
PspN4I	GGNNCC	3 cut(s)	992, 1005, 1272
PspPI	GGNCC	2 cut(s)	196, 991
PspPPI	RGGWCCY	1 cut(s)	991
PstNI	CAGNNNCTG	1 cut(s)	318
PsuI	RGATCY	1 cut(s)	842
RigI	GGCCGGCC	1 cut(s)	225
RruI	TCGCGA	2 cut(s)	521, 630
RsaI	GTAC	2 cut(s)	806, 1272
RsaNI	GTAC	2 cut(s)	805, 1271
SacI	GAGCTC	1 cut(s)	1138
SalI	GTCGAC	2 cut(s)	28, 1215
SaqAI	TTAA	3 cut(s)	342, 755, 801
SatI	GCNGC	7 cut(s)	313, 663, 666, 669, 828, 1020, 1027
Sau96I	GGNCC	2 cut(s)	196, 991
SchI	GAGTC	1 cut(s)	35
ScrFI	CCNGG	1 cut(s)	939
SduI	GDGCHC	5 cut(s)	480, 589, 973, 1138, 1154
SexAI	ACCWGGT	1 cut(s)	937
SfaNI	GCATC	1 cut(s)	1186
SinI	GGWCC	1 cut(s)	991
SmlI	CTYRAG	2 cut(s)	353, 1088
SmoI	CTYRAG	2 cut(s)	353, 1088
SphI	GCATGC	1 cut(s)	852
Sse9I	AATT	3 cut(s)	271, 887, 1308
SspMI	CTAG	3 cut(s)	200, 983, 1170
SstI	GAGCTC	1 cut(s)	1138
StyD4I	CCNGG	1 cut(s)	937
StyI	CCWWGG	1 cut(s)	216
TaaI	ACNGT	4 cut(s)	34, 121, 700, 912
TaiI	ACGT	3 cut(s)	15, 862, 1184
TaqI	TCGA	9 cut(s)	29, 503, 543, 567, 612, 914, 1080, 1118, 1216
TaqII	GACCGA	1 cut(s)	640
TasI	AATT	3 cut(s)	271, 887, 1308
TatI	WGTACW	1 cut(s)	804
TauI	GCSGC	2 cut(s)	665, 668
Tru1I	TTAA	3 cut(s)	342, 755, 801
Tru9I	TTAA	3 cut(s)	342, 755, 801
TscAI	CASTG	2 cut(s)	124, 1308
TseFI	GTSAC	2 cut(s)	430, 652
TseI	GCWGC	5 cut(s)	312, 668, 827, 1019, 1026
Tsp45I	GTSAC	2 cut(s)	430, 652
TspDTI	ATGAA	3 cut(s)	1216, 1266, 1346
TspRI	CASTG	2 cut(s)	124, 1308
Van91I	CCANNNNNTGG	1 cut(s)	143
VneI	GTGCAC	1 cut(s)	969
VpaK11BI	GGWCC	1 cut(s)	991
XapI	RAATTY	1 cut(s)	1308
XceI	RCATGY	1 cut(s)	852
XmiI	GTMKAC	2 cut(s)	29, 1216
XmnI	GAANNNNTTC	1 cut(s)	794
XspI	CTAG	3 cut(s)	200, 983, 1170

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.