Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Forward (+)

27354659 .. 27359805

Gene Structure 5147 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1224900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1326 bp

ATGGCGGTCGACGTTAGCGTGAGGGAGTCAACAATCGTCAAGCCGACGGAGGAGACGCCGAAGCAGGTTCTGTGGATGTCCAACTTGGACTTGGTAATTCTGGGCAAGCACACCCCCAGTGTATATTTCTACCGGCGAAGCCAAACCGGCAGCCATCAGGGCAACTCCTTCTTCGACCCGGCGGTGCTCAAGCGCGCCCTCGCCAAGGCCCTCGTGCCCTTCTACCCATTGGCGGGGCGCCTCCAGCAGAACGAAACCGGCCGTTCCGAAATCAACTGCAATGGGGAGGGGGTGCTGTTTGTTGTAGCGGAGACCACCTCCGTCCTCGATGATTTTGGCGATTTTGCGCCGACTCCTGAGTTCCGGAAGCTCATCCCCGTCATTGATTATTCTGCTGGGATTTCCACATATCCCCTCTTGGTGGTGCAGGTCACATACTTCAAATGCGGTGGAGTGTCACTTGGCGTCGGCCTGGAACATCGGGTGGCAGATGGGTGCTCAGGTCTCCATTTTGTAAATACATGGTCTGATATCGCTCGCGGACTTGACCTTACAATCCCACCTTTCATCGACCGGACATTACTTCGTGCCCGAGACCCACCTCAGACAACATTCGACCACGTTGAATACCAACCTGATCCGCCCTTAAAAACTCCTCCGCCGACCACAAAAGATGGTGATGCTGAGAGCACAACAGTCTCCATTTTCAGATTGACGCGGGAGCAACTAAGCGTCTTGAAAGCCAGGTCTAAGGAAGAAGGGAACTCAATCAACTACAGCACATATGAGATGTTGGCAGGCCATGTTTGGAGATGTGCATCCAAGGCACGTAATCTTCCCGATGACCAAGTGACCAAACTGCATGTTGCGGTTGATGGACGGTCCAGACTGCAACCCCCACTCCCACCCGGTTTCTTTGGCAATGTGGTTTTCGCAGGCGCACCATTTGCAACAGCGGGGGATCTCAAATCGAAACCAACATGGTATGCTGCAAGCCAAATACATGATGTTGTGGTGCGCATGAACAACGATTACCTTAGATCAGCTCTTGATTATCTTGAGGTTCAACCTGATCTGTCGGCCCTTGTTCGCGGAGCTCATACTTTTCGGTGCCCGAAACTTGGGATAACTAGTTGGGCAAGGCTGCCGATCTACGATGCAGATTTTGGTTGGGGTCGACCTATTTTCATGGGTCCCGGTGGAATTGGATACGAGGGGTTGGCTTTTGTGTTACCAAGTCCAATAAATGATGGGAGTTTATCAGTGGCCATCTCCCTGCAGTCTGACCATATGAAATCATTTGCCAAGTTGTTATATGACATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

442

Amino Acids

48.53

Weight (kDa)

6.37

Isoelectric Point (pI)

37.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	4 - 436	5.5e-107	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1019
Acc36I	ACCTGC	2 cut(s)	55, 418
AccB1I	GGYRCC	2 cut(s)	237, 1110
AccI	GTMKAC	2 cut(s)	9, 1177
AccII	CGCG	4 cut(s)	195, 540, 718, 1092
AccIII	TCCGGA	1 cut(s)	363
AclWI	GGATC	2 cut(s)	632, 969
AcoI	YGGCCR	2 cut(s)	259, 1266
AcyI	GRCGYC	3 cut(s)	56, 238, 465
AfiI	CCNNNNNNNGG	5 cut(s)	205, 232, 233, 421, 1121
AgsI	TTSAA	4 cut(s)	442, 626, 739, 1067
AhlI	ACTAGT	1 cut(s)	1130
AjnI	CCWGG	2 cut(s)	471, 743
AluBI	AGCT	3 cut(s)	370, 1046, 1097
AluI	AGCT	3 cut(s)	370, 1046, 1097
Alw21I	GWGCWC	4 cut(s)	189, 500, 692, 1099
Alw26I	GTCTC	5 cut(s)	47, 305, 509, 588, 703
AlwI	GGATC	2 cut(s)	632, 969
AlwNI	CAGNNNCTG	1 cut(s)	70
Ama87I	CYCGRG	1 cut(s)	591
Aor13HI	TCCGGA	1 cut(s)	363
AoxI	GGCC	6 cut(s)	207, 259, 469, 799, 1080, 1266
ApeKI	GCWGC	3 cut(s)	150, 989, 1144
AspLEI	GCGC	6 cut(s)	195, 197, 240, 349, 941, 1020
AspS9I	GGNCC	4 cut(s)	208, 882, 1081, 1193
AsuC2I	CCSGG	3 cut(s)	179, 909, 1197
AsuHPI	GGTGA	1 cut(s)	689
AvaI	CYCGRG	1 cut(s)	591
AvaII	GGWCC	2 cut(s)	882, 1193
BaeGI	GKGCMC	3 cut(s)	219, 592, 1115
BalI	TGGCCA	1 cut(s)	1268
BanI	GGYRCC	2 cut(s)	237, 1110
BanII	GRGCYC	1 cut(s)	1099
BauI	CACGAG	1 cut(s)	212
Bbv12I	GWGCWC	4 cut(s)	189, 500, 692, 1099
BbvI	GCAGC	3 cut(s)	162, 976, 1131
BccI	CCATC	6 cut(s)	162, 485, 668, 869, 1244, 1277
BceAI	ACGGC	1 cut(s)	246
BciT130I	CCWGG	2 cut(s)	473, 745
BciVI	GTATCC	1 cut(s)	1202
BcnI	CCSGG	3 cut(s)	179, 909, 1197
BcoDI	GTCTC	5 cut(s)	47, 305, 509, 588, 703
BcuI	ACTAGT	1 cut(s)	1130
BfaI	CTAG	1 cut(s)	1131
BfmI	CTRYAG	2 cut(s)	775, 1277
BfoI	RGCGCY	1 cut(s)	241
BfuAI	ACCTGC	2 cut(s)	55, 418
BfuI	GTATCC	1 cut(s)	1202
BglI	GCCNNNNNGGC	2 cut(s)	147, 159
BisI	GCNGC	3 cut(s)	151, 990, 1145
BlsI	GCNGC	3 cut(s)	152, 991, 1146
Bme1390I	CCNGG	5 cut(s)	179, 473, 745, 909, 1197
Bme18I	GGWCC	2 cut(s)	882, 1193
BmeT110I	CYCGRG	1 cut(s)	591
BmgT120I	GGNCC	4 cut(s)	208, 882, 1081, 1193
BmiI	GGNNCC	4 cut(s)	239, 1112, 1194, 1195
BmrFI	CCNGG	5 cut(s)	179, 473, 745, 909, 1197
BmrI	ACTGGG	1 cut(s)	111
BmsI	GCATC	3 cut(s)	670, 827, 1147
BmuI	ACTGGG	1 cut(s)	111
BplI	GAGNNNNNCTC	2 cut(s)	302, 334
BpmI	CTGGAG	1 cut(s)	227
Bpu10I	CCTNAGC	1 cut(s)	499
BpuEI	CTTGAG	2 cut(s)	173, 1079
BpuMI	CCSGG	3 cut(s)	179, 909, 1197
BsaAI	YACGTR	1 cut(s)	830
BsaBI	GATNNNNATC	1 cut(s)	817
BsaHI	GRCGYC	3 cut(s)	56, 238, 465
BsaI	GGTCTC	3 cut(s)	305, 509, 588
BsaJI	CCNNGG	2 cut(s)	204, 822
BsaWI	WCCGGW	2 cut(s)	363, 573
BsaXI	ACNNNNNCTCC	2 cut(s)	885, 915
Bsc4I	CCNNNNNNNGG	5 cut(s)	205, 232, 233, 421, 1121
Bse118I	RCCGGY	3 cut(s)	132, 146, 257
Bse1I	ACTGG	1 cut(s)	117
Bse3DI	GCAATG	2 cut(s)	286, 928
Bse8I	GATNNNNATC	1 cut(s)	817
BseAI	TCCGGA	1 cut(s)	363
BseBI	CCWGG	2 cut(s)	473, 745
BseDI	CCNNGG	2 cut(s)	204, 822
BseGI	GGATG	3 cut(s)	81, 372, 818
BseJI	GATNNNNATC	1 cut(s)	817
BseLI	CCNNNNNNNGG	5 cut(s)	205, 232, 233, 421, 1121
BseMI	GCAATG	2 cut(s)	286, 928
BseMII	CTCAG	4 cut(s)	348, 513, 617, 675
BseNI	ACTGG	1 cut(s)	117
BsePI	GCGCGC	1 cut(s)	193
BseRI	GAGGAG	2 cut(s)	65, 645
BseSI	GKGCMC	3 cut(s)	219, 592, 1115
BseX3I	CGGCCG	1 cut(s)	259
BseXI	GCAGC	3 cut(s)	162, 976, 1131
BseYI	CCCAGC	1 cut(s)	395
BsgI	GTGCAG	1 cut(s)	446
Bsh1236I	CGCG	4 cut(s)	195, 540, 718, 1092
Bsh1285I	CGRYCG	3 cut(s)	9, 262, 574
BshFI	GGCC	6 cut(s)	209, 261, 471, 801, 1082, 1268
BshNI	GGYRCC	2 cut(s)	237, 1110
BsiEI	CGRYCG	3 cut(s)	9, 262, 574
BsiHKAI	GWGCWC	4 cut(s)	189, 500, 692, 1099
BsiHKCI	CYCGRG	1 cut(s)	591
BsiSI	CCGG	8 cut(s)	133, 147, 179, 258, 364, 574, 909, 1197
BslFI	GGGAC	1 cut(s)	1179
BslI	CCNNNNNNNGG	5 cut(s)	205, 232, 233, 421, 1121
BsmAI	GTCTC	5 cut(s)	47, 305, 509, 588, 703
BsmBI	CGTCTC	1 cut(s)	47
BsmFI	GGGAC	1 cut(s)	1179
BsnI	GGCC	6 cut(s)	209, 261, 471, 801, 1082, 1268
Bso31I	GGTCTC	3 cut(s)	305, 509, 588
BsoBI	CYCGRG	1 cut(s)	591
Bsp1286I	GDGCHC	7 cut(s)	189, 219, 500, 592, 692, 1099, 1115
Bsp13I	TCCGGA	1 cut(s)	363
Bsp143I	GATC	5 cut(s)	637, 961, 1040, 1072, 1149
BspANI	GGCC	6 cut(s)	209, 261, 471, 801, 1082, 1268
BspCNI	CTCAG	4 cut(s)	349, 512, 616, 676
BspEI	TCCGGA	1 cut(s)	363
BspFNI	CGCG	4 cut(s)	195, 540, 718, 1092
BspLI	GGNNCC	4 cut(s)	239, 1112, 1194, 1195
BspMAI	CTGCAG	1 cut(s)	1281
BspMI	ACCTGC	2 cut(s)	55, 418
BspPI	GGATC	2 cut(s)	632, 969
BspT107I	GGYRCC	2 cut(s)	237, 1110
BspTNI	GGTCTC	3 cut(s)	305, 509, 588
BsrDI	GCAATG	2 cut(s)	286, 928
BsrFI	RCCGGY	3 cut(s)	132, 146, 257
BsrI	ACTGG	1 cut(s)	117
BssAI	RCCGGY	3 cut(s)	132, 146, 257
BssECI	CCNNGG	2 cut(s)	204, 822
BssHII	GCGCGC	1 cut(s)	193
BssMI	GATC	5 cut(s)	637, 961, 1040, 1072, 1149
BssNI	GRCGYC	3 cut(s)	56, 238, 465
BssSI	CACGAG	1 cut(s)	212
BssT1I	CCWWGG	2 cut(s)	204, 822
Bst2BI	CACGAG	1 cut(s)	212
Bst2UI	CCWGG	2 cut(s)	473, 745
Bst4CI	ACNGT	2 cut(s)	697, 882
BstACI	GRCGYC	3 cut(s)	56, 238, 465
BstAPI	GCANNNNNTGC	1 cut(s)	947
BstBAI	YACGTR	1 cut(s)	830
BstC8I	GCNNGC	6 cut(s)	107, 195, 538, 799, 937, 994
BstDEI	CTNAG	7 cut(s)	357, 499, 603, 684, 728, 750, 1037
BstENI	CCTNNNNNAGG	1 cut(s)	203
BstF5I	GGATG	3 cut(s)	81, 372, 818
BstFNI	CGCG	4 cut(s)	195, 540, 718, 1092
BstH2I	RGCGCY	1 cut(s)	241
BstHHI	GCGC	6 cut(s)	195, 197, 240, 349, 941, 1020
BstKTI	GATC	5 cut(s)	640, 964, 1043, 1075, 1152
BstMAI	GTCTC	5 cut(s)	47, 305, 509, 588, 703
BstMBI	GATC	5 cut(s)	637, 961, 1040, 1072, 1149
BstMCI	CGRYCG	3 cut(s)	9, 262, 574
BstMWI	GCNNNNNNNGC	5 cut(s)	147, 159, 244, 824, 947
BstNI	CCWGG	2 cut(s)	473, 745
BstNSI	RCATGY	1 cut(s)	866
BstSCI	CCNGG	5 cut(s)	177, 471, 743, 907, 1195
BstSFI	CTRYAG	2 cut(s)	775, 1277
BstSLI	GKGCMC	3 cut(s)	219, 592, 1115
BstUI	CGCG	4 cut(s)	195, 540, 718, 1092
BstV1I	GCAGC	3 cut(s)	162, 976, 1131
BstX2I	RGATCY	1 cut(s)	961
BstYI	RGATCY	1 cut(s)	961
BstZI	CGGCCG	1 cut(s)	259
BsuI	GTATCC	1 cut(s)	1202
BsuRI	GGCC	6 cut(s)	209, 261, 471, 801, 1082, 1268
BtsCI	GGATG	3 cut(s)	81, 372, 818
BtsIMutI	CAGTG	2 cut(s)	124, 1269
BveI	ACCTGC	2 cut(s)	55, 418
Cac8I	GCNNGC	6 cut(s)	107, 195, 538, 799, 937, 994
CaiI	CAGNNNCTG	1 cut(s)	70
CfoI	GCGC	6 cut(s)	195, 197, 240, 349, 941, 1020
Cfr10I	RCCGGY	3 cut(s)	132, 146, 257
Cfr13I	GGNCC	4 cut(s)	208, 882, 1081, 1193
CseI	GACGC	4 cut(s)	64, 454, 721, 724
CspCI	CAANNNNNGTGG	2 cut(s)	430, 465
CviAII	CATG	7 cut(s)	522, 803, 863, 981, 1004, 1021, 1189
DdeI	CTNAG	7 cut(s)	357, 499, 603, 684, 728, 750, 1037
DinI	GGCGCC	1 cut(s)	239
DpnI	GATC	5 cut(s)	639, 963, 1042, 1074, 1151
DpnII	GATC	5 cut(s)	637, 961, 1040, 1072, 1149
EaeI	YGGCCR	2 cut(s)	259, 1266
EagI	CGGCCG	1 cut(s)	259
EciI	GGCGGA	2 cut(s)	630, 648
Ecl136II	GAGCTC	1 cut(s)	1097
EclXI	CGGCCG	1 cut(s)	259
Eco130I	CCWWGG	2 cut(s)	204, 822
Eco24I	GRGCYC	1 cut(s)	1099
Eco31I	GGTCTC	3 cut(s)	305, 509, 588
Eco32I	GATATC	1 cut(s)	532
Eco47I	GGWCC	2 cut(s)	882, 1193
Eco52I	CGGCCG	1 cut(s)	259
Eco53kI	GAGCTC	1 cut(s)	1097
Eco88I	CYCGRG	1 cut(s)	591
EcoICRI	GAGCTC	1 cut(s)	1097
EcoNI	CCTNNNNNAGG	1 cut(s)	203
EcoO109I	RGGNCCY	2 cut(s)	208, 1193
EcoRII	CCWGG	2 cut(s)	471, 743
EcoRV	GATATC	1 cut(s)	532
EcoT14I	CCWWGG	2 cut(s)	204, 822
EcoT38I	GRGCYC	1 cut(s)	1099
EgeI	GGCGCC	1 cut(s)	239
EheI	GGCGCC	1 cut(s)	239
ErhI	CCWWGG	2 cut(s)	204, 822
Esp3I	CGTCTC	1 cut(s)	47
FaeI	CATG	7 cut(s)	525, 806, 866, 984, 1007, 1024, 1192
FaqI	GGGAC	1 cut(s)	1179
FatI	CATG	7 cut(s)	521, 802, 862, 980, 1003, 1020, 1188
FauI	CCCGC	3 cut(s)	226, 711, 949
FauNDI	CATATG	3 cut(s)	784, 1290, 1322
FblI	GTMKAC	2 cut(s)	9, 1177
Fnu4HI	GCNGC	3 cut(s)	151, 990, 1145
FokI	GGATG	3 cut(s)	88, 359, 805
FriOI	GRGCYC	1 cut(s)	1099
Fsp4HI	GCNGC	3 cut(s)	151, 990, 1145
FspAI	RTGCGCAY	1 cut(s)	1019
FspBI	CTAG	1 cut(s)	1131
FspI	TGCGCA	1 cut(s)	1019
GlaI	GCGC	6 cut(s)	194, 196, 239, 348, 940, 1019
GluI	GCNGC	3 cut(s)	151, 990, 1145
GsaI	CCCAGC	1 cut(s)	399
GsuI	CTGGAG	1 cut(s)	227
HaeII	RGCGCY	1 cut(s)	241
HaeIII	GGCC	6 cut(s)	209, 261, 471, 801, 1082, 1268
HapII	CCGG	8 cut(s)	133, 147, 179, 258, 364, 574, 909, 1197
HgaI	GACGC	4 cut(s)	64, 454, 721, 724
HhaI	GCGC	6 cut(s)	195, 197, 240, 349, 941, 1020
Hin1I	GRCGYC	3 cut(s)	56, 238, 465
Hin1II	CATG	7 cut(s)	525, 806, 866, 984, 1007, 1024, 1192
Hin6I	GCGC	6 cut(s)	193, 195, 238, 347, 939, 1018
HinP1I	GCGC	6 cut(s)	193, 195, 238, 347, 939, 1018
HincII	GTYRAC	3 cut(s)	10, 30, 1178
HindII	GTYRAC	3 cut(s)	10, 30, 1178
HinfI	GANTC	2 cut(s)	26, 352
HpaII	CCGG	8 cut(s)	133, 147, 179, 258, 364, 574, 909, 1197
HphI	GGTGA	1 cut(s)	689
Hpy166II	GTNNAC	3 cut(s)	10, 30, 1178
Hpy188I	TCNGA	5 cut(s)	268, 529, 606, 710, 1285
Hpy188III	TCNNGA	7 cut(s)	356, 364, 736, 839, 885, 1049, 1058
Hpy8I	GTNNAC	3 cut(s)	10, 30, 1178
Hpy99I	CGWCG	3 cut(s)	14, 49, 470
HpyAV	CCTTC	3 cut(s)	178, 229, 752
HpyCH4III	ACNGT	2 cut(s)	697, 882
HpyCH4IV	ACGT	3 cut(s)	12, 621, 829
HpyCH4V	TGCA	9 cut(s)	279, 427, 818, 862, 892, 950, 992, 1160, 1279
HpyF10VI	GCNNNNNNNGC	5 cut(s)	147, 159, 244, 824, 947
HpyF3I	CTNAG	7 cut(s)	357, 499, 603, 684, 728, 750, 1037
HpySE526I	ACGT	3 cut(s)	12, 621, 829
Hsp92I	GRCGYC	3 cut(s)	56, 238, 465
Hsp92II	CATG	7 cut(s)	525, 806, 866, 984, 1007, 1024, 1192
HspAI	GCGC	6 cut(s)	193, 195, 238, 347, 939, 1018
KasI	GGCGCC	1 cut(s)	237
KflI	GGGWCCC	1 cut(s)	1193
Kpn2I	TCCGGA	1 cut(s)	363
Kzo9I	GATC	5 cut(s)	637, 961, 1040, 1072, 1149
LmnI	GCTCC	2 cut(s)	721, 1094
Lsp1109I	GCAGC	3 cut(s)	162, 976, 1131
LweI	GCATC	3 cut(s)	670, 827, 1147
MaeI	CTAG	1 cut(s)	1131
MaeII	ACGT	3 cut(s)	12, 621, 829
MaeIII	GTNAC	4 cut(s)	430, 456, 850, 1230
MalI	GATC	5 cut(s)	639, 963, 1042, 1074, 1151
MboI	GATC	5 cut(s)	637, 961, 1040, 1072, 1149
MboII	GAAGA	3 cut(s)	163, 767, 827
MflI	RGATCY	1 cut(s)	961
MhlI	GDGCHC	7 cut(s)	189, 219, 500, 592, 692, 1099, 1115
MlsI	TGGCCA	1 cut(s)	1268
MluCI	AATT	2 cut(s)	96, 1203
MluNI	TGGCCA	1 cut(s)	1268
Mly113I	GGCGCC	1 cut(s)	238
MlyI	GAGTC	2 cut(s)	35, 346
MmeI	TCCRAC	1 cut(s)	105
Mox20I	TGGCCA	1 cut(s)	1268
MroI	TCCGGA	1 cut(s)	363
MscI	TGGCCA	1 cut(s)	1268
MseI	TTAA	1 cut(s)	647
Msp20I	TGGCCA	1 cut(s)	1268
MspA1I	CMGCKG	1 cut(s)	956
MspI	CCGG	8 cut(s)	133, 147, 179, 258, 364, 574, 909, 1197
MspR9I	CCNGG	5 cut(s)	179, 473, 745, 909, 1197
MvaI	CCWGG	2 cut(s)	473, 745
MvnI	CGCG	4 cut(s)	195, 540, 718, 1092
MwoI	GCNNNNNNNGC	5 cut(s)	147, 159, 244, 824, 947
NarI	GGCGCC	1 cut(s)	238
NciI	CCSGG	3 cut(s)	179, 909, 1197
NdeI	CATATG	3 cut(s)	784, 1290, 1322
NdeII	GATC	5 cut(s)	637, 961, 1040, 1072, 1149
NlaIII	CATG	7 cut(s)	525, 806, 866, 984, 1007, 1024, 1192
NlaIV	GGNNCC	4 cut(s)	239, 1112, 1194, 1195
NmuCI	GTSAC	3 cut(s)	430, 456, 850
NsbI	TGCGCA	1 cut(s)	1019
NspI	RCATGY	1 cut(s)	866
PauI	GCGCGC	1 cut(s)	193
PcsI	WCGNNNNNNNCGW	1 cut(s)	15
PkrI	GCNGC	3 cut(s)	152, 991, 1146
PleI	GAGTC	2 cut(s)	34, 346
PluTI	GGCGCC	1 cut(s)	241
PpsI	GAGTC	2 cut(s)	34, 346
Ppu21I	YACGTR	1 cut(s)	830
PpuMI	RGGWCCY	1 cut(s)	1193
Psp124BI	GAGCTC	1 cut(s)	1099
Psp5II	RGGWCCY	1 cut(s)	1193
Psp6I	CCWGG	2 cut(s)	471, 743
PspFI	CCCAGC	1 cut(s)	395
PspGI	CCWGG	2 cut(s)	471, 743
PspN4I	GGNNCC	4 cut(s)	239, 1112, 1194, 1195
PspPI	GGNCC	4 cut(s)	208, 882, 1081, 1193
PspPPI	RGGWCCY	1 cut(s)	1193
PsrI	GAACNNNNNNTAC	2 cut(s)	1016, 1048
PstI	CTGCAG	1 cut(s)	1281
PstNI	CAGNNNCTG	1 cut(s)	70
PsuI	RGATCY	1 cut(s)	961
PteI	GCGCGC	1 cut(s)	193
SacI	GAGCTC	1 cut(s)	1099
SalI	GTCGAC	2 cut(s)	8, 1176
SaqAI	TTAA	1 cut(s)	647
SatI	GCNGC	3 cut(s)	151, 990, 1145
Sau3AI	GATC	5 cut(s)	637, 961, 1040, 1072, 1149
Sau96I	GGNCC	4 cut(s)	208, 882, 1081, 1193
SchI	GAGTC	2 cut(s)	35, 346
ScrFI	CCNGG	5 cut(s)	179, 473, 745, 909, 1197
SduI	GDGCHC	7 cut(s)	189, 219, 500, 592, 692, 1099, 1115
SfaNI	GCATC	3 cut(s)	670, 827, 1147
SfcI	CTRYAG	2 cut(s)	775, 1277
SfoI	GGCGCC	1 cut(s)	239
SinI	GGWCC	2 cut(s)	882, 1193
SmlI	CTYRAG	2 cut(s)	188, 1058
SmoI	CTYRAG	2 cut(s)	188, 1058
SpeI	ACTAGT	1 cut(s)	1130
Sse9I	AATT	2 cut(s)	96, 1203
SspDI	GGCGCC	1 cut(s)	237
SspMI	CTAG	1 cut(s)	1131
SstI	GAGCTC	1 cut(s)	1099
StyD4I	CCNGG	5 cut(s)	177, 471, 743, 907, 1195
StyI	CCWWGG	2 cut(s)	204, 822
TaaI	ACNGT	2 cut(s)	697, 882
TaiI	ACGT	3 cut(s)	15, 624, 832
TaqI	TCGA	7 cut(s)	9, 174, 327, 570, 615, 971, 1177
TasI	AATT	2 cut(s)	96, 1203
Tru1I	TTAA	1 cut(s)	647
Tru9I	TTAA	1 cut(s)	647
TscAI	CASTG	2 cut(s)	124, 1269
TseFI	GTSAC	3 cut(s)	430, 456, 850
TseI	GCWGC	3 cut(s)	150, 989, 1144
Tsp45I	GTSAC	3 cut(s)	430, 456, 850
TspDTI	ATGAA	4 cut(s)	556, 1037, 1177, 1307
TspGWI	ACGGA	2 cut(s)	62, 310
TspRI	CASTG	2 cut(s)	124, 1269
VpaK11BI	GGWCC	2 cut(s)	882, 1193
XagI	CCTNNNNNAGG	1 cut(s)	203
XceI	RCATGY	1 cut(s)	866
XcmI	CCANNNNNNNNNTGG	1 cut(s)	88
XmiI	GTMKAC	2 cut(s)	9, 1177
XspI	CTAG	1 cut(s)	1131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.