Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Reverse (-)

17599816 .. 17601170

Gene Structure 1355 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00014290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1272 bp

ATGGCAGTCAACGTTAGCATGAGAGAGACAACGGTGGTGAGGCCAGCAGCGGAGACTCCTCGGCAGTCGCTTTGGATCTCAAACTTGGATAAGGTGATGCCCAACACTCACACTCCCCTTGTTTATTTCTACAAGCCAAGCGACATCGCTGGTGCAGGCGAGGACAACAATTTCTTTGACATGCGCGTGTTGAAGGACGCGCTCAGCAAGGCCCTCGTGCCCTTTTACCCTTTGGCCGGCCGCCTACGGCAGAAAAAGGACGAGGGAGAGAATGGCCGTATCGAAATCGATTGCAATGCAGAGGGGGCCTTGTTTTCTGTGGCCGATAGCAGCTCTTGCATTAGTGACTATGGTGATTTTGCGCCCACTCCCGAATTTGGGAGAGGGCTCATCCCCATCGTTGATTATTCCGGTGGGATATCTTCTTTTCCCTTGTTGCTGGTTCAGATCACATACTTGAAATGTGGTGGAGTGGCACTTGGTCTTCGCTTGGACCATCGTATAGCAGATGGATTATCTACTTTCCACTTCATAAATACATGGTCTGATATGACTCGGGGTCTCGACGTTGCAATTTGGCCAAGCATGGACAGGACGATACTTCGTGCCCGAGACCCACCCCAGCCTTTACCCGACCACAATCACCACATTGCATTCCCTCCTCGGAATAAGCATGAGAGCCCTGCAGCAACAACGGTTACAAAATTTAGATTTACAAGGGAGCAGCTCAATGTCTTGAAAGCTATGTCAACCATGACTAAAGTGGATGGCGAGGATATGAACACTTTACCAGTCAAGTTTACCACATTTGAGGTGTTTGCAGGTCATATTACAACCCCTCTGCCACCTGGTTACTTCGGTAATGTGGTTTTCAGAGCCACAGCAATAGCCTTAGCAGGGGATCTCATATCGAAACCAATATGGTATGCTGCAAGCTGTATTCACAATGCTTTGGTGCGTATGGACGATGATTATCTTCGATCAGCAATCGACTACTTTGAACTTCAGCAGCGTCATCAGGAACTGTCGAGCCTTGCTCATGGGACTCATGTAAGGTGTCCTAATCTTGGGATAAATAGCTGGTGTATATTGCCCATCTATGATGCTGATTTTGGGTGGGGTAGACCAATTTCCGTTGGGCGTTCTGGAATCCGAAGTGAAGGGAAGGGCTACATGGTACCTAGTGCAACTGATGATGGGAGTTTGTCACTGTCCATTAGTCTGCAATCTCAGCATATGATATCATTTTCCAAGTTGGTTTATGACATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

423

Amino Acids

46.87

Weight (kDa)

6.23

Isoelectric Point (pI)

43.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	4 - 277	2.9e-53	Transferase family
Transferase	PF02458	277 - 419	6.6e-26	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	812
Acc65I	GGTACC	1 cut(s)	1177
AccB1I	GGYRCC	1 cut(s)	1177
AccI	GTMKAC	1 cut(s)	1123
AccII	CGCG	2 cut(s)	186, 200
AciI	CCGC	2 cut(s)	50, 241
AclI	AACGTT	1 cut(s)	12
AclWI	GGATC	2 cut(s)	83, 909
AcoI	YGGCCR	5 cut(s)	234, 238, 274, 321, 578
AcsI	RAATTY	2 cut(s)	374, 704
AcuI	CTGAAG	1 cut(s)	989
AfaI	GTAC	1 cut(s)	1179
AfiI	CCNNNNNNNGG	5 cut(s)	236, 377, 378, 897, 1067
AgsI	TTSAA	4 cut(s)	193, 460, 739, 1001
AhdI	GACNNNNNGTC	1 cut(s)	558
AjnI	CCWGG	1 cut(s)	847
AluBI	AGCT	5 cut(s)	333, 727, 743, 936, 1080
AluI	AGCT	5 cut(s)	333, 727, 743, 936, 1080
Alw26I	GTCTC	4 cut(s)	20, 47, 566, 606
AlwI	GGATC	2 cut(s)	83, 909
AlwNI	CAGNNNCTG	1 cut(s)	1024
Ama87I	CYCGRG	2 cut(s)	555, 609
AoxI	GGCC	8 cut(s)	41, 210, 234, 238, 274, 306, 321, 578
ApeKI	GCWGC	6 cut(s)	47, 330, 686, 724, 929, 1009
ApoI	RAATTY	2 cut(s)	374, 704
Asp718I	GGTACC	1 cut(s)	1177
AspLEI	GCGC	3 cut(s)	186, 202, 364
AspS9I	GGNCC	3 cut(s)	211, 306, 493
AsuHPI	GGTGA	4 cut(s)	49, 106, 365, 635
AvaI	CYCGRG	2 cut(s)	555, 609
AvaII	GGWCC	1 cut(s)	493
BaeGI	GKGCMC	2 cut(s)	222, 610
BalI	TGGCCA	1 cut(s)	580
BanI	GGYRCC	1 cut(s)	1177
BanII	GRGCYC	2 cut(s)	390, 683
BauI	CACGAG	1 cut(s)	215
BbsI	GAAGAC	1 cut(s)	476
BbvI	GCAGC	6 cut(s)	59, 342, 698, 736, 916, 1021
BccI	CCATC	6 cut(s)	404, 503, 504, 761, 1103, 1190
BceAI	ACGGC	2 cut(s)	261, 263
BcgI	CGANNNNNNTGC	4 cut(s)	196, 230, 278, 312
BciT130I	CCWGG	1 cut(s)	849
BcoDI	GTCTC	4 cut(s)	20, 47, 566, 606
BfaI	CTAG	1 cut(s)	1182
BfmI	CTRYAG	1 cut(s)	684
BfuAI	ACCTGC	1 cut(s)	812
BisI	GCNGC	7 cut(s)	48, 241, 331, 687, 725, 930, 1010
BlpI	GCTNAGC	1 cut(s)	203
BlsI	GCNGC	7 cut(s)	49, 242, 332, 688, 726, 931, 1011
Bme1390I	CCNGG	1 cut(s)	849
Bme18I	GGWCC	1 cut(s)	493
BmeRI	GACNNNNNGTC	1 cut(s)	558
BmeT110I	CYCGRG	2 cut(s)	555, 609
BmgT120I	GGNCC	3 cut(s)	211, 306, 493
BmiI	GGNNCC	2 cut(s)	307, 1179
BmrFI	CCNGG	1 cut(s)	849
BmsI	GCATC	2 cut(s)	87, 1093
BpiI	GAAGAC	1 cut(s)	476
BplI	GAGNNNNNCTC	2 cut(s)	1021, 1053
Bpu10I	CCTNAGC	1 cut(s)	892
Bpu1102I	GCTNAGC	1 cut(s)	203
Bsa29I	ATCGAT	1 cut(s)	288
BsaBI	GATNNNNATC	1 cut(s)	972
BsaI	GGTCTC	2 cut(s)	566, 606
BsaJI	CCNNGG	2 cut(s)	59, 662
BsaWI	WCCGGW	1 cut(s)	410
BsaXI	ACNNNNNCTCC	2 cut(s)	97, 127
Bsc4I	CCNNNNNNNGG	5 cut(s)	236, 377, 378, 897, 1067
Bse118I	RCCGGY	1 cut(s)	236
Bse1I	ACTGG	1 cut(s)	791
Bse3DI	GCAATG	2 cut(s)	301, 648
Bse8I	GATNNNNATC	1 cut(s)	972
BseBI	CCWGG	1 cut(s)	849
BseCI	ATCGAT	1 cut(s)	288
BseDI	CCNNGG	2 cut(s)	59, 662
BseGI	GGATG	2 cut(s)	390, 772
BseJI	GATNNNNATC	1 cut(s)	972
BseLI	CCNNNNNNNGG	5 cut(s)	236, 377, 378, 897, 1067
BseMI	GCAATG	2 cut(s)	301, 648
BseMII	CTCAG	2 cut(s)	217, 1244
BseNI	ACTGG	1 cut(s)	791
BseRI	GAGGAG	2 cut(s)	48, 651
BseSI	GKGCMC	2 cut(s)	222, 610
BseX3I	CGGCCG	1 cut(s)	238
BseXI	GCAGC	6 cut(s)	59, 342, 698, 736, 916, 1021
BseYI	CCCAGC	1 cut(s)	621
BsgI	GTGCAG	1 cut(s)	174
Bsh1236I	CGCG	2 cut(s)	186, 200
Bsh1285I	CGRYCG	1 cut(s)	241
BshFI	GGCC	8 cut(s)	43, 212, 236, 240, 276, 308, 323, 580
BshNI	GGYRCC	1 cut(s)	1177
BshVI	ATCGAT	1 cut(s)	288
BsiEI	CGRYCG	1 cut(s)	241
BsiHKCI	CYCGRG	2 cut(s)	555, 609
BsiSI	CCGG	2 cut(s)	237, 411
BslFI	GGGAC	1 cut(s)	1057
BslI	CCNNNNNNNGG	5 cut(s)	236, 377, 378, 897, 1067
BsmAI	GTCTC	4 cut(s)	20, 47, 566, 606
BsmFI	GGGAC	1 cut(s)	1057
BsmI	GAATGC	1 cut(s)	653
BsnI	GGCC	8 cut(s)	43, 212, 236, 240, 276, 308, 323, 580
Bso31I	GGTCTC	2 cut(s)	566, 606
BsoBI	CYCGRG	2 cut(s)	555, 609
Bsp1286I	GDGCHC	4 cut(s)	222, 390, 610, 683
Bsp143I	GATC	4 cut(s)	75, 447, 901, 980
Bsp1720I	GCTNAGC	1 cut(s)	203
BspACI	CCGC	2 cut(s)	50, 241
BspANI	GGCC	8 cut(s)	43, 212, 236, 240, 276, 308, 323, 580
BspCNI	CTCAG	2 cut(s)	216, 1243
BspDI	ATCGAT	1 cut(s)	288
BspFNI	CGCG	2 cut(s)	186, 200
BspLI	GGNNCC	2 cut(s)	307, 1179
BspMAI	CTGCAG	1 cut(s)	688
BspMI	ACCTGC	1 cut(s)	812
BspPI	GGATC	2 cut(s)	83, 909
BspT107I	GGYRCC	1 cut(s)	1177
BspTNI	GGTCTC	2 cut(s)	566, 606
BsrDI	GCAATG	2 cut(s)	301, 648
BsrFI	RCCGGY	1 cut(s)	236
BsrI	ACTGG	1 cut(s)	791
BssAI	RCCGGY	1 cut(s)	236
BssECI	CCNNGG	2 cut(s)	59, 662
BssMI	GATC	4 cut(s)	75, 447, 901, 980
BssSI	CACGAG	1 cut(s)	215
Bst2BI	CACGAG	1 cut(s)	215
Bst2UI	CCWGG	1 cut(s)	849
Bst4CI	ACNGT	4 cut(s)	34, 697, 1026, 1212
BstAPI	GCANNNNNTGC	1 cut(s)	336
BstC8I	GCNNGC	4 cut(s)	45, 157, 238, 934
BstDEI	CTNAG	3 cut(s)	203, 892, 1230
BstF5I	GGATG	2 cut(s)	390, 772
BstFNI	CGCG	2 cut(s)	186, 200
BstHHI	GCGC	3 cut(s)	186, 202, 364
BstKTI	GATC	4 cut(s)	78, 450, 904, 983
BstMAI	GTCTC	4 cut(s)	20, 47, 566, 606
BstMBI	GATC	4 cut(s)	75, 447, 901, 980
BstMCI	CGRYCG	1 cut(s)	241
BstMWI	GCNNNNNNNGC	3 cut(s)	305, 336, 1231
BstNI	CCWGG	1 cut(s)	849
BstNSI	RCATGY	1 cut(s)	184
BstSCI	CCNGG	1 cut(s)	847
BstSFI	CTRYAG	1 cut(s)	684
BstSLI	GKGCMC	2 cut(s)	222, 610
BstUI	CGCG	2 cut(s)	186, 200
BstV1I	GCAGC	6 cut(s)	59, 342, 698, 736, 916, 1021
BstV2I	GAAGAC	1 cut(s)	476
BstX2I	RGATCY	2 cut(s)	75, 901
BstYI	RGATCY	2 cut(s)	75, 901
BstZI	CGGCCG	1 cut(s)	238
Bsu15I	ATCGAT	1 cut(s)	288
BsuRI	GGCC	8 cut(s)	43, 212, 236, 240, 276, 308, 323, 580
BsuTUI	ATCGAT	1 cut(s)	288
BtgZI	GCGATG	1 cut(s)	130
BtsCI	GGATG	2 cut(s)	390, 772
BtsIMutI	CAGTG	1 cut(s)	1208
BveI	ACCTGC	1 cut(s)	812
Cac8I	GCNNGC	4 cut(s)	45, 157, 238, 934
CaiI	CAGNNNCTG	1 cut(s)	1024
CfoI	GCGC	3 cut(s)	186, 202, 364
Cfr10I	RCCGGY	1 cut(s)	236
Cfr13I	GGNCC	3 cut(s)	211, 306, 493
ClaI	ATCGAT	1 cut(s)	288
CseI	GACGC	2 cut(s)	206, 1001
CsiI	ACCWGGT	1 cut(s)	847
Csp6I	GTAC	1 cut(s)	1178
CviAII	CATG	9 cut(s)	19, 181, 540, 586, 674, 754, 1040, 1049, 1174
CviQI	GTAC	1 cut(s)	1178
DdeI	CTNAG	3 cut(s)	203, 892, 1230
DpnI	GATC	4 cut(s)	77, 449, 903, 982
DpnII	GATC	4 cut(s)	75, 447, 901, 980
DriI	GACNNNNNGTC	1 cut(s)	558
EaeI	YGGCCR	5 cut(s)	234, 238, 274, 321, 578
EagI	CGGCCG	1 cut(s)	238
Eam1105I	GACNNNNNGTC	1 cut(s)	558
EclXI	CGGCCG	1 cut(s)	238
Eco24I	GRGCYC	2 cut(s)	390, 683
Eco31I	GGTCTC	2 cut(s)	566, 606
Eco32I	GATATC	2 cut(s)	420, 1242
Eco47I	GGWCC	1 cut(s)	493
Eco52I	CGGCCG	1 cut(s)	238
Eco57I	CTGAAG	1 cut(s)	989
Eco88I	CYCGRG	2 cut(s)	555, 609
EcoO109I	RGGNCCY	2 cut(s)	211, 306
EcoRII	CCWGG	1 cut(s)	847
EcoRV	GATATC	2 cut(s)	420, 1242
EcoT38I	GRGCYC	2 cut(s)	390, 683
FaeI	CATG	9 cut(s)	22, 184, 543, 589, 677, 757, 1043, 1052, 1177
FaqI	GGGAC	1 cut(s)	1057
FatI	CATG	9 cut(s)	18, 180, 539, 585, 673, 753, 1039, 1048, 1173
FauNDI	CATATG	2 cut(s)	1236, 1268
FblI	GTMKAC	1 cut(s)	1123
Fnu4HI	GCNGC	7 cut(s)	48, 241, 331, 687, 725, 930, 1010
FokI	GGATG	2 cut(s)	377, 779
FriOI	GRGCYC	2 cut(s)	390, 683
FseI	GGCCGGCC	1 cut(s)	240
Fsp4HI	GCNGC	7 cut(s)	48, 241, 331, 687, 725, 930, 1010
FspBI	CTAG	1 cut(s)	1182
GlaI	GCGC	3 cut(s)	185, 201, 363
GluI	GCNGC	7 cut(s)	48, 241, 331, 687, 725, 930, 1010
GsaI	CCCAGC	1 cut(s)	625
HaeIII	GGCC	8 cut(s)	43, 212, 236, 240, 276, 308, 323, 580
HapII	CCGG	2 cut(s)	237, 411
HgaI	GACGC	2 cut(s)	206, 1001
HhaI	GCGC	3 cut(s)	186, 202, 364
Hin1II	CATG	9 cut(s)	22, 184, 543, 589, 677, 757, 1043, 1052, 1177
Hin6I	GCGC	3 cut(s)	184, 200, 362
HinP1I	GCGC	3 cut(s)	184, 200, 362
HincII	GTYRAC	2 cut(s)	10, 750
HindII	GTYRAC	2 cut(s)	10, 750
HinfI	GANTC	4 cut(s)	55, 553, 1045, 1149
HpaII	CCGG	2 cut(s)	237, 411
HphI	GGTGA	4 cut(s)	49, 106, 365, 635
Hpy166II	GTNNAC	4 cut(s)	10, 750, 801, 1124
Hpy188I	TCNGA	5 cut(s)	447, 547, 666, 875, 1154
Hpy188III	TCNNGA	5 cut(s)	371, 563, 736, 1019, 1146
Hpy8I	GTNNAC	4 cut(s)	10, 750, 801, 1124
Hpy99I	CGWCG	1 cut(s)	569
HpyAV	CCTTC	3 cut(s)	187, 1154, 1159
HpyCH4III	ACNGT	4 cut(s)	34, 697, 1026, 1212
HpyCH4IV	ACGT	2 cut(s)	12, 567
HpyF10VI	GCNNNNNNNGC	3 cut(s)	305, 336, 1231
HpyF3I	CTNAG	3 cut(s)	203, 892, 1230
HpySE526I	ACGT	2 cut(s)	12, 567
Hsp92II	CATG	9 cut(s)	22, 184, 543, 589, 677, 757, 1043, 1052, 1177
HspAI	GCGC	3 cut(s)	184, 200, 362
KpnI	GGTACC	1 cut(s)	1181
KroI	GCCGGC	1 cut(s)	236
KroNI	GCCGGC	1 cut(s)	238
Kzo9I	GATC	4 cut(s)	75, 447, 901, 980
LmnI	GCTCC	1 cut(s)	721
Lsp1109I	GCAGC	6 cut(s)	59, 342, 698, 736, 916, 1021
LweI	GCATC	2 cut(s)	87, 1093
MabI	ACCWGGT	1 cut(s)	847
MaeI	CTAG	1 cut(s)	1182
MaeII	ACGT	2 cut(s)	12, 567
MaeIII	GTNAC	4 cut(s)	344, 697, 851, 1206
MalI	GATC	4 cut(s)	77, 449, 903, 982
MboI	GATC	4 cut(s)	75, 447, 901, 980
MboII	GAAGA	3 cut(s)	414, 476, 968
MflI	RGATCY	2 cut(s)	75, 901
MhlI	GDGCHC	4 cut(s)	222, 390, 610, 683
MlsI	TGGCCA	1 cut(s)	580
MluCI	AATT	5 cut(s)	169, 374, 573, 704, 1128
MluNI	TGGCCA	1 cut(s)	580
MlyI	GAGTC	3 cut(s)	49, 547, 1039
Mox20I	TGGCCA	1 cut(s)	580
MroNI	GCCGGC	1 cut(s)	236
MscI	TGGCCA	1 cut(s)	580
MslI	CAYNNNNRTG	1 cut(s)	185
Msp20I	TGGCCA	1 cut(s)	580
MspA1I	CMGCKG	1 cut(s)	50
MspI	CCGG	2 cut(s)	237, 411
MspR9I	CCNGG	1 cut(s)	849
Mva1269I	GAATGC	1 cut(s)	653
MvaI	CCWGG	1 cut(s)	849
MvnI	CGCG	2 cut(s)	186, 200
MwoI	GCNNNNNNNGC	3 cut(s)	305, 336, 1231
NaeI	GCCGGC	1 cut(s)	238
NdeI	CATATG	2 cut(s)	1236, 1268
NdeII	GATC	4 cut(s)	75, 447, 901, 980
NgoMIV	GCCGGC	1 cut(s)	236
NlaIII	CATG	9 cut(s)	22, 184, 543, 589, 677, 757, 1043, 1052, 1177
NlaIV	GGNNCC	2 cut(s)	307, 1179
NmeAIII	GCCGAG	1 cut(s)	40
NmuCI	GTSAC	2 cut(s)	344, 1206
NspI	RCATGY	1 cut(s)	184
PctI	GAATGC	1 cut(s)	653
PdiI	GCCGGC	1 cut(s)	238
PfeI	GAWTC	1 cut(s)	1149
PkrI	GCNGC	7 cut(s)	49, 242, 332, 688, 726, 931, 1011
PleI	GAGTC	3 cut(s)	49, 547, 1039
PpsI	GAGTC	3 cut(s)	49, 547, 1039
Psp1406I	AACGTT	1 cut(s)	12
Psp6I	CCWGG	1 cut(s)	847
PspFI	CCCAGC	1 cut(s)	621
PspGI	CCWGG	1 cut(s)	847
PspN4I	GGNNCC	2 cut(s)	307, 1179
PspPI	GGNCC	3 cut(s)	211, 306, 493
PstI	CTGCAG	1 cut(s)	688
PstNI	CAGNNNCTG	1 cut(s)	1024
PsuI	RGATCY	2 cut(s)	75, 901
RigI	GGCCGGCC	1 cut(s)	240
RsaI	GTAC	1 cut(s)	1179
RsaNI	GTAC	1 cut(s)	1178
RseI	CAYNNNNRTG	1 cut(s)	185
SatI	GCNGC	7 cut(s)	48, 241, 331, 687, 725, 930, 1010
Sau3AI	GATC	4 cut(s)	75, 447, 901, 980
Sau96I	GGNCC	3 cut(s)	211, 306, 493
SchI	GAGTC	3 cut(s)	49, 547, 1039
ScrFI	CCNGG	1 cut(s)	849
SduI	GDGCHC	4 cut(s)	222, 390, 610, 683
SexAI	ACCWGGT	1 cut(s)	847
SfaNI	GCATC	2 cut(s)	87, 1093
SfcI	CTRYAG	1 cut(s)	684
SinI	GGWCC	1 cut(s)	493
SmiMI	CAYNNNNRTG	1 cut(s)	185
Sse9I	AATT	5 cut(s)	169, 374, 573, 704, 1128
SsiI	CCGC	2 cut(s)	50, 241
SspMI	CTAG	1 cut(s)	1182
StyD4I	CCNGG	1 cut(s)	847
TaaI	ACNGT	4 cut(s)	34, 697, 1026, 1212
TaiI	ACGT	2 cut(s)	15, 570
TaqI	TCGA	7 cut(s)	282, 288, 564, 911, 979, 990, 1028
TasI	AATT	5 cut(s)	169, 374, 573, 704, 1128
TauI	GCSGC	1 cut(s)	243
TfiI	GAWTC	1 cut(s)	1149
TscAI	CASTG	1 cut(s)	1215
TseFI	GTSAC	2 cut(s)	344, 1206
TseI	GCWGC	6 cut(s)	47, 330, 686, 724, 929, 1009
Tsp45I	GTSAC	2 cut(s)	344, 1206
TspDTI	ATGAA	2 cut(s)	520, 794
TspGWI	ACGGA	1 cut(s)	1123
TspRI	CASTG	1 cut(s)	1215
VpaK11BI	GGWCC	1 cut(s)	493
XapI	RAATTY	2 cut(s)	374, 704
XceI	RCATGY	1 cut(s)	184
XcmI	CCANNNNNNNNNTGG	1 cut(s)	760
XmiI	GTMKAC	1 cut(s)	1123
XspI	CTAG	1 cut(s)	1182

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.