Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00536

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Reverse (-)

3667 .. 5027

Gene Structure 1361 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G012040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1176 bp

ATGGCAGTCAACGTTAGCGTGAGGGAGTCGACGGTGGTGAAGCCAGCGGTGGAGACACCTCGGCAGTCGTTGTGGATGTCCAACTTGGACATGATCAGTCCAAATGCTCATACTCCCACTCTTTTTGATCCGCGCGTGCTGAAGGACGCGCTCAGCAAGGCCCTAGTGTCTTTTCTACCCTTGGCCGGCCGTCTGAGGCAAAACAACGAGGACAAGAATGCTCGTATTGAAATCAATTGCAATGCTGAGGGCGTCTTGTTTGTTGTGGCCGATAGCAGCTCCTGCGCTGATGATTTTACCGATTTTAAGACCACTCTTGAGTTAGGGAGATGGCTCATCCCTCAGGTCACATACCTGAAATGCGGTGGAGTTGCACTTGGTATGGCTTTGAACACAGCGCAGCGGATGGGTTTGCTCCTCTCCTCGATCACAACCACCATCGCGAATACCATCCTACTCCATCGGTCACAAAAGCCGCCGCTGCTTCTGATCCCGATCATGAGACGGCTACTGTCTCTGTTTTCAAGTTCACAAGGGAGCAGATCAACATTGAAAGCTAAGTCCTTAACAACCAAGAAAGATGACGATGTTGATAACGGGAACTCCTTCGTTAAGTACACTTCGTATGAGGTCTTTGCAGCTCATGTATGGAGATCTGCATGCAAGGCACGTGAACTTGCTGATGATCAAGGGACACAATTCCACATTACCGCAAATGGACGGTCGAGATTGCAACCTCCACTCCCACCTGGTTACTTTGGTAATGTGATTTTCTCATGTGCACCAACTGCCCTAGCAGGGGACCTCATATCGGAACCGATGAGCTACGCTGCGAGCTGCATTCACGAGGCTTTGGTGCGTATGGACGATGAGTATCTCCGATCAGCCCTCGACTATCTTGAGCTTCAGCAGTCTCATCATCATCTGTCGAGCTTTGCTCGTGGAGCTCATTACTATAAGAGCCCTAATCTTGGGATAACTAGCTGGGTTACGTTGCCTATATATGATGCTGATTTTGGTTGGGGTCGACCAGTTTTCATGGGACGCGGTGGACTTTCACATGAAGGGAAGGCTTACATGGTCCCAAGTGCAAGTGATGATGGGAGTTTCTCACTGGGAATTTCTCTGCAATCTCGGCATATGAAGTCATTTTCTAAGTTGATTTACGACATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

391

Amino Acids

43.07

Weight (kDa)

8.44

Isoelectric Point (pI)

50.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	4 - 386	1.4e-67	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	29, 1027
AccII	CGCG	5 cut(s)	133, 135, 149, 443, 1047
AciI	CCGC	8 cut(s)	47, 131, 363, 403, 476, 479, 711, 1047
AclI	AACGTT	1 cut(s)	12
AclWI	GGATC	2 cut(s)	122, 484
AcoI	YGGCCR	3 cut(s)	183, 187, 267
AcsI	RAATTY	1 cut(s)	1119
AcuI	CTGAAG	2 cut(s)	161, 890
AcvI	CACGTG	1 cut(s)	671
AcyI	GRCGYC	1 cut(s)	252
AfaI	GTAC	1 cut(s)	617
AfiI	CCNNNNNNNGG	5 cut(s)	185, 798, 799, 811, 971
AgsI	TTSAA	4 cut(s)	230, 391, 525, 553
AjnI	CCWGG	1 cut(s)	748
AluBI	AGCT	9 cut(s)	279, 557, 641, 825, 837, 904, 933, 947, 984
AluI	AGCT	9 cut(s)	279, 557, 641, 825, 837, 904, 933, 947, 984
Alw21I	GWGCWC	2 cut(s)	784, 949
Alw26I	GTCTC	4 cut(s)	47, 496, 519, 918
Alw44I	GTGCAC	1 cut(s)	780
AlwI	GGATC	2 cut(s)	122, 484
AlwNI	CAGNNNCTG	1 cut(s)	282
AoxI	GGCC	4 cut(s)	159, 183, 187, 267
ApaLI	GTGCAC	1 cut(s)	780
ApeKI	GCWGC	6 cut(s)	276, 400, 481, 638, 830, 837
ApoI	RAATTY	1 cut(s)	1119
ArsI	GACNNNNNNTTYG	2 cut(s)	707, 739
Asp700I	GAANNNNTTC	1 cut(s)	605
AspLEI	GCGC	4 cut(s)	135, 151, 287, 400
AspS9I	GGNCC	3 cut(s)	160, 802, 1081
AsuHPI	GGTGA	1 cut(s)	49
AvaII	GGWCC	2 cut(s)	802, 1081
AxyI	CCTNAGG	1 cut(s)	342
BaeGI	GKGCMC	1 cut(s)	784
BanII	GRGCYC	2 cut(s)	949, 965
BauI	CACGAG	2 cut(s)	845, 939
BbrPI	CACGTG	1 cut(s)	671
Bbv12I	GWGCWC	2 cut(s)	784, 949
BbvCI	CCTCAGC	1 cut(s)	246
BbvI	GCAGC	6 cut(s)	288, 412, 468, 650, 817, 824
BccI	CCATC	6 cut(s)	324, 400, 446, 458, 468, 1094
BceAI	ACGGC	2 cut(s)	174, 521
BciT130I	CCWGG	1 cut(s)	750
BclI	TGATCA	2 cut(s)	93, 685
BcoDI	GTCTC	4 cut(s)	47, 496, 519, 918
BfaI	CTAG	3 cut(s)	164, 794, 981
BglII	AGATCT	1 cut(s)	653
BisI	GCNGC	8 cut(s)	277, 401, 476, 479, 482, 639, 831, 838
BlpI	GCTNAGC	1 cut(s)	152
BlsI	GCNGC	8 cut(s)	278, 402, 477, 480, 483, 640, 832, 839
Bme1390I	CCNGG	1 cut(s)	750
Bme18I	GGWCC	2 cut(s)	802, 1081
BmgT120I	GGNCC	3 cut(s)	160, 802, 1081
BmiI	GGNNCC	3 cut(s)	803, 816, 1083
BmrFI	CCNGG	1 cut(s)	750
BmrI	ACTGGG	1 cut(s)	1124
BmsI	GCATC	1 cut(s)	997
BmuI	ACTGGG	1 cut(s)	1124
BplI	GAGNNNNNCTC	2 cut(s)	922, 954
Bpu10I	CCTNAGC	1 cut(s)	246
Bpu1102I	GCTNAGC	1 cut(s)	152
BpuEI	CTTGAG	2 cut(s)	338, 920
BsaAI	YACGTR	1 cut(s)	671
BsaBI	GATNNNNATC	2 cut(s)	494, 873
BsaHI	GRCGYC	1 cut(s)	252
BsaJI	CCNNGG	2 cut(s)	59, 180
BsaXI	ACNNNNNCTCC	4 cut(s)	587, 617, 726, 756
Bsc4I	CCNNNNNNNGG	5 cut(s)	185, 798, 799, 811, 971
Bse118I	RCCGGY	1 cut(s)	185
Bse1I	ACTGG	2 cut(s)	1031, 1119
Bse21I	CCTNAGG	1 cut(s)	342
Bse3DI	GCAATG	1 cut(s)	247
Bse8I	GATNNNNATC	2 cut(s)	494, 873
BseBI	CCWGG	1 cut(s)	750
BseDI	CCNNGG	2 cut(s)	59, 180
BseGI	GGATG	4 cut(s)	81, 336, 411, 450
BseJI	GATNNNNATC	2 cut(s)	494, 873
BseLI	CCNNNNNNNGG	5 cut(s)	185, 798, 799, 811, 971
BseMI	GCAATG	1 cut(s)	247
BseMII	CTCAG	4 cut(s)	166, 185, 237, 356
BseNI	ACTGG	2 cut(s)	1031, 1119
BseRI	GAGGAG	2 cut(s)	407, 412
BseSI	GKGCMC	1 cut(s)	784
BseX3I	CGGCCG	1 cut(s)	187
BseXI	GCAGC	6 cut(s)	288, 412, 468, 650, 817, 824
BseYI	CCCAGC	1 cut(s)	984
Bsh1236I	CGCG	5 cut(s)	133, 135, 149, 443, 1047
Bsh1285I	CGRYCG	2 cut(s)	190, 725
BshFI	GGCC	4 cut(s)	161, 185, 189, 269
BsiEI	CGRYCG	2 cut(s)	190, 725
BsiHKAI	GWGCWC	2 cut(s)	784, 949
BsiSI	CCGG	1 cut(s)	186
BslFI	GGGAC	4 cut(s)	706, 815, 1056, 1067
BslI	CCNNNNNNNGG	5 cut(s)	185, 798, 799, 811, 971
BsmAI	GTCTC	4 cut(s)	47, 496, 519, 918
BsmBI	CGTCTC	1 cut(s)	496
BsmFI	GGGAC	4 cut(s)	706, 815, 1056, 1067
BsmI	GAATGC	2 cut(s)	223, 840
BsnI	GGCC	4 cut(s)	161, 185, 189, 269
Bsp1286I	GDGCHC	3 cut(s)	784, 949, 965
Bsp143I	GATC	9 cut(s)	93, 127, 426, 489, 495, 542, 653, 685, 881
Bsp1720I	GCTNAGC	1 cut(s)	152
Bsp68I	TCGCGA	1 cut(s)	443
BspACI	CCGC	8 cut(s)	47, 131, 363, 403, 476, 479, 711, 1047
BspANI	GGCC	4 cut(s)	161, 185, 189, 269
BspCNI	CTCAG	4 cut(s)	165, 186, 238, 355
BspFNI	CGCG	5 cut(s)	133, 135, 149, 443, 1047
BspHI	TCATGA	1 cut(s)	498
BspLI	GGNNCC	3 cut(s)	803, 816, 1083
BspPI	GGATC	2 cut(s)	122, 484
BsrDI	GCAATG	1 cut(s)	247
BsrFI	RCCGGY	1 cut(s)	185
BsrI	ACTGG	2 cut(s)	1031, 1119
BssAI	RCCGGY	1 cut(s)	185
BssECI	CCNNGG	2 cut(s)	59, 180
BssMI	GATC	9 cut(s)	93, 127, 426, 489, 495, 542, 653, 685, 881
BssNI	GRCGYC	1 cut(s)	252
BssSI	CACGAG	2 cut(s)	845, 939
BssT1I	CCWWGG	1 cut(s)	180
Bst2BI	CACGAG	2 cut(s)	845, 939
Bst2UI	CCWGG	1 cut(s)	750
Bst4CI	ACNGT	3 cut(s)	34, 513, 723
BstACI	GRCGYC	1 cut(s)	252
BstAPI	GCANNNNNTGC	2 cut(s)	282, 788
BstBAI	YACGTR	1 cut(s)	671
BstC8I	GCNNGC	5 cut(s)	45, 137, 187, 661, 835
BstDEI	CTNAG	6 cut(s)	152, 194, 246, 342, 558, 1155
BstF5I	GGATG	4 cut(s)	81, 336, 411, 450
BstFNI	CGCG	5 cut(s)	133, 135, 149, 443, 1047
BstHHI	GCGC	4 cut(s)	135, 151, 287, 400
BstKTI	GATC	9 cut(s)	96, 130, 429, 492, 498, 545, 656, 688, 884
BstMAI	GTCTC	4 cut(s)	47, 496, 519, 918
BstMBI	GATC	9 cut(s)	93, 127, 426, 489, 495, 542, 653, 685, 881
BstMCI	CGRYCG	2 cut(s)	190, 725
BstMWI	GCNNNNNNNGC	6 cut(s)	282, 481, 665, 788, 944, 1135
BstNI	CCWGG	1 cut(s)	750
BstNSI	RCATGY	1 cut(s)	663
BstSCI	CCNGG	1 cut(s)	748
BstSLI	GKGCMC	1 cut(s)	784
BstUI	CGCG	5 cut(s)	133, 135, 149, 443, 1047
BstV1I	GCAGC	6 cut(s)	288, 412, 468, 650, 817, 824
BstX2I	RGATCY	1 cut(s)	653
BstYI	RGATCY	1 cut(s)	653
BstZI	CGGCCG	1 cut(s)	187
Bsu36I	CCTNAGG	1 cut(s)	342
BsuRI	GGCC	4 cut(s)	161, 185, 189, 269
BtgZI	GCGATG	1 cut(s)	424
BtsCI	GGATG	4 cut(s)	81, 336, 411, 450
BtsIMutI	CAGTG	1 cut(s)	1112
BtuMI	TCGCGA	1 cut(s)	443
Cac8I	GCNNGC	5 cut(s)	45, 137, 187, 661, 835
CaiI	CAGNNNCTG	1 cut(s)	282
CciI	TCATGA	1 cut(s)	498
CfoI	GCGC	4 cut(s)	135, 151, 287, 400
Cfr10I	RCCGGY	1 cut(s)	185
Cfr13I	GGNCC	3 cut(s)	160, 802, 1081
CseI	GACGC	3 cut(s)	155, 241, 1053
CsiI	ACCWGGT	1 cut(s)	748
Csp6I	GTAC	1 cut(s)	616
CspCI	CAANNNNNGTGG	2 cut(s)	106, 141
CviAII	CATG	8 cut(s)	91, 499, 644, 660, 777, 1039, 1061, 1078
CviQI	GTAC	1 cut(s)	616
DdeI	CTNAG	6 cut(s)	152, 194, 246, 342, 558, 1155
DpnI	GATC	9 cut(s)	95, 129, 428, 491, 497, 544, 655, 687, 883
DpnII	GATC	9 cut(s)	93, 127, 426, 489, 495, 542, 653, 685, 881
EaeI	YGGCCR	3 cut(s)	183, 187, 267
EagI	CGGCCG	1 cut(s)	187
Ecl136II	GAGCTC	1 cut(s)	947
EclXI	CGGCCG	1 cut(s)	187
Eco130I	CCWWGG	1 cut(s)	180
Eco24I	GRGCYC	2 cut(s)	949, 965
Eco47I	GGWCC	2 cut(s)	802, 1081
Eco52I	CGGCCG	1 cut(s)	187
Eco53kI	GAGCTC	1 cut(s)	947
Eco57I	CTGAAG	2 cut(s)	161, 890
Eco72I	CACGTG	1 cut(s)	671
Eco81I	CCTNAGG	1 cut(s)	342
EcoICRI	GAGCTC	1 cut(s)	947
EcoO109I	RGGNCCY	2 cut(s)	160, 802
EcoRII	CCWGG	1 cut(s)	748
EcoT14I	CCWWGG	1 cut(s)	180
EcoT38I	GRGCYC	2 cut(s)	949, 965
ErhI	CCWWGG	1 cut(s)	180
Esp3I	CGTCTC	1 cut(s)	496
FaeI	CATG	8 cut(s)	94, 502, 647, 663, 780, 1042, 1064, 1081
FaqI	GGGAC	4 cut(s)	706, 815, 1056, 1067
FatI	CATG	8 cut(s)	90, 498, 643, 659, 776, 1038, 1060, 1077
FauNDI	CATATG	1 cut(s)	1140
FbaI	TGATCA	2 cut(s)	93, 685
FblI	GTMKAC	2 cut(s)	29, 1027
Fnu4HI	GCNGC	8 cut(s)	277, 401, 476, 479, 482, 639, 831, 838
FokI	GGATG	4 cut(s)	88, 323, 418, 437
FriOI	GRGCYC	2 cut(s)	949, 965
FseI	GGCCGGCC	1 cut(s)	189
Fsp4HI	GCNGC	8 cut(s)	277, 401, 476, 479, 482, 639, 831, 838
FspBI	CTAG	3 cut(s)	164, 794, 981
GlaI	GCGC	4 cut(s)	134, 150, 286, 399
GluI	GCNGC	8 cut(s)	277, 401, 476, 479, 482, 639, 831, 838
GsaI	CCCAGC	1 cut(s)	988
HaeIII	GGCC	4 cut(s)	161, 185, 189, 269
HapII	CCGG	1 cut(s)	186
HgaI	GACGC	3 cut(s)	155, 241, 1053
HhaI	GCGC	4 cut(s)	135, 151, 287, 400
Hin1I	GRCGYC	1 cut(s)	252
Hin1II	CATG	8 cut(s)	94, 502, 647, 663, 780, 1042, 1064, 1081
Hin6I	GCGC	4 cut(s)	133, 149, 285, 398
HinP1I	GCGC	4 cut(s)	133, 149, 285, 398
HincII	GTYRAC	3 cut(s)	10, 30, 1028
HindII	GTYRAC	3 cut(s)	10, 30, 1028
HinfI	GANTC	1 cut(s)	26
HpaII	CCGG	1 cut(s)	186
HphI	GGTGA	1 cut(s)	49
Hpy166II	GTNNAC	8 cut(s)	10, 30, 530, 618, 674, 782, 1028, 1052
Hpy188I	TCNGA	5 cut(s)	195, 489, 814, 881, 1175
Hpy188III	TCNNGA	7 cut(s)	317, 442, 493, 499, 726, 845, 899
Hpy8I	GTNNAC	8 cut(s)	10, 30, 530, 618, 674, 782, 1028, 1052
Hpy99I	CGWCG	1 cut(s)	34
HpyAV	CCTTC	4 cut(s)	136, 616, 1058, 1063
HpyCH4III	ACNGT	3 cut(s)	34, 513, 723
HpyCH4IV	ACGT	3 cut(s)	12, 670, 992
HpyF10VI	GCNNNNNNNGC	6 cut(s)	282, 481, 665, 788, 944, 1135
HpyF3I	CTNAG	6 cut(s)	152, 194, 246, 342, 558, 1155
HpySE526I	ACGT	3 cut(s)	12, 670, 992
Hsp92I	GRCGYC	1 cut(s)	252
Hsp92II	CATG	8 cut(s)	94, 502, 647, 663, 780, 1042, 1064, 1081
HspAI	GCGC	4 cut(s)	133, 149, 285, 398
KroI	GCCGGC	1 cut(s)	185
KroNI	GCCGGC	1 cut(s)	187
Ksp22I	TGATCA	2 cut(s)	93, 685
Kzo9I	GATC	9 cut(s)	93, 127, 426, 489, 495, 542, 653, 685, 881
LmnI	GCTCC	4 cut(s)	284, 420, 537, 944
Lsp1109I	GCAGC	6 cut(s)	288, 412, 468, 650, 817, 824
LweI	GCATC	1 cut(s)	997
MabI	ACCWGGT	1 cut(s)	748
MaeI	CTAG	3 cut(s)	164, 794, 981
MaeII	ACGT	3 cut(s)	12, 670, 992
MaeIII	GTNAC	4 cut(s)	346, 465, 752, 988
MalI	GATC	9 cut(s)	95, 129, 428, 491, 497, 544, 655, 687, 883
MboI	GATC	9 cut(s)	93, 127, 426, 489, 495, 542, 653, 685, 881
MfeI	CAATTG	1 cut(s)	235
MflI	RGATCY	1 cut(s)	653
MhlI	GDGCHC	3 cut(s)	784, 949, 965
MluCI	AATT	3 cut(s)	235, 698, 1119
MlyI	GAGTC	1 cut(s)	35
MmeI	TCCRAC	1 cut(s)	105
MroNI	GCCGGC	1 cut(s)	185
MroXI	GAANNNNTTC	1 cut(s)	605
MseI	TTAA	3 cut(s)	306, 566, 612
MspA1I	CMGCKG	3 cut(s)	47, 403, 481
MspI	CCGG	1 cut(s)	186
MspR9I	CCNGG	1 cut(s)	750
MunI	CAATTG	1 cut(s)	235
Mva1269I	GAATGC	2 cut(s)	223, 840
MvaI	CCWGG	1 cut(s)	750
MvnI	CGCG	5 cut(s)	133, 135, 149, 443, 1047
MwoI	GCNNNNNNNGC	6 cut(s)	282, 481, 665, 788, 944, 1135
NaeI	GCCGGC	1 cut(s)	187
NdeI	CATATG	1 cut(s)	1140
NdeII	GATC	9 cut(s)	93, 127, 426, 489, 495, 542, 653, 685, 881
NgoMIV	GCCGGC	1 cut(s)	185
NlaIII	CATG	8 cut(s)	94, 502, 647, 663, 780, 1042, 1064, 1081
NlaIV	GGNNCC	3 cut(s)	803, 816, 1083
NmeAIII	GCCGAG	2 cut(s)	40, 1114
NmuCI	GTSAC	2 cut(s)	346, 465
NruI	TCGCGA	1 cut(s)	443
NspI	RCATGY	1 cut(s)	663
PaeI	GCATGC	1 cut(s)	663
PagI	TCATGA	1 cut(s)	498
PctI	GAATGC	2 cut(s)	223, 840
PdiI	GCCGGC	1 cut(s)	187
PdmI	GAANNNNTTC	1 cut(s)	605
PkrI	GCNGC	8 cut(s)	278, 402, 477, 480, 483, 640, 832, 839
PleI	GAGTC	1 cut(s)	34
PmaCI	CACGTG	1 cut(s)	671
PmlI	CACGTG	1 cut(s)	671
PpsI	GAGTC	1 cut(s)	34
Ppu21I	YACGTR	1 cut(s)	671
PpuMI	RGGWCCY	1 cut(s)	802
Psp124BI	GAGCTC	1 cut(s)	949
Psp1406I	AACGTT	1 cut(s)	12
Psp5II	RGGWCCY	1 cut(s)	802
Psp6I	CCWGG	1 cut(s)	748
PspCI	CACGTG	1 cut(s)	671
PspFI	CCCAGC	1 cut(s)	984
PspGI	CCWGG	1 cut(s)	748
PspN4I	GGNNCC	3 cut(s)	803, 816, 1083
PspPI	GGNCC	3 cut(s)	160, 802, 1081
PspPPI	RGGWCCY	1 cut(s)	802
PstNI	CAGNNNCTG	1 cut(s)	282
PsuI	RGATCY	1 cut(s)	653
RigI	GGCCGGCC	1 cut(s)	189
RruI	TCGCGA	1 cut(s)	443
RsaI	GTAC	1 cut(s)	617
RsaNI	GTAC	1 cut(s)	616
SacI	GAGCTC	1 cut(s)	949
SalI	GTCGAC	2 cut(s)	28, 1026
SaqAI	TTAA	3 cut(s)	306, 566, 612
SatI	GCNGC	8 cut(s)	277, 401, 476, 479, 482, 639, 831, 838
Sau3AI	GATC	9 cut(s)	93, 127, 426, 489, 495, 542, 653, 685, 881
Sau96I	GGNCC	3 cut(s)	160, 802, 1081
SchI	GAGTC	1 cut(s)	35
ScrFI	CCNGG	1 cut(s)	750
SduI	GDGCHC	3 cut(s)	784, 949, 965
SexAI	ACCWGGT	1 cut(s)	748
SfaNI	GCATC	1 cut(s)	997
SinI	GGWCC	2 cut(s)	802, 1081
SmlI	CTYRAG	2 cut(s)	317, 899
SmoI	CTYRAG	2 cut(s)	317, 899
SphI	GCATGC	1 cut(s)	663
Sse9I	AATT	3 cut(s)	235, 698, 1119
SsiI	CCGC	8 cut(s)	47, 131, 363, 403, 476, 479, 711, 1047
SspMI	CTAG	3 cut(s)	164, 794, 981
SstI	GAGCTC	1 cut(s)	949
StyD4I	CCNGG	1 cut(s)	748
StyI	CCWWGG	1 cut(s)	180
TaaI	ACNGT	3 cut(s)	34, 513, 723
TaiI	ACGT	3 cut(s)	15, 673, 995
TaqI	TCGA	6 cut(s)	29, 425, 725, 891, 929, 1027
TaqII	GACCGA	1 cut(s)	453
TasI	AATT	3 cut(s)	235, 698, 1119
TatI	WGTACW	1 cut(s)	615
TauI	GCSGC	2 cut(s)	478, 481
Tru1I	TTAA	3 cut(s)	306, 566, 612
Tru9I	TTAA	3 cut(s)	306, 566, 612
TscAI	CASTG	1 cut(s)	1119
TseFI	GTSAC	2 cut(s)	346, 465
TseI	GCWGC	6 cut(s)	276, 400, 481, 638, 830, 837
Tsp45I	GTSAC	2 cut(s)	346, 465
TspDTI	ATGAA	3 cut(s)	1027, 1077, 1157
TspRI	CASTG	1 cut(s)	1119
VneI	GTGCAC	1 cut(s)	780
VpaK11BI	GGWCC	2 cut(s)	802, 1081
XapI	RAATTY	1 cut(s)	1119
XceI	RCATGY	1 cut(s)	663
XmiI	GTMKAC	2 cut(s)	29, 1027
XmnI	GAANNNNTTC	1 cut(s)	605
XspI	CTAG	3 cut(s)	164, 794, 981

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.