Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Forward (+)

7731043 .. 7735912

Gene Structure 4870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G100800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1431 bp

ATGGATGTTATTACAACGCGGTATACAGAGATGTGCTTTGCCTTCTTCACTGCAAAGAAGGTTAGACAAGTAGTTTGGTTTGGAGGTGAGGTGAGGCCCAGCAAAAAGATGGCGGTGGTCAACGTGAGCGTGAGGGAGTCAACGTTGGTGAAGCCGGCGGAGGAGACGCCGGGGCAGGTGCTGTGGATGACCAACTTGGACCTGGTGATTTTGGGCAACCACACGCCAAGCGTCTACTTCTACAGGCAGAACCAAAACAGTGTGCACGGTCATCATAACAACTTCTTCGACCCGCAGGTGCTCAAGCAGGCGCTAAGCAAGGCCCTCGTGCCCTTCTACCCGTTGGCGGGGCGCCTTGGGATGGAAGGCAACGGCCGCGGCGAGATCGACTGCAATTCGGAGGGCGCGCTGTTTGTCGTGGCAGAGACGGGCTCCACCATCGAGGATTTCGGCGACTTCGCGCCGACTCTCGAGTTCCGGAAGCTCATCCCAGCCGTTGATTATTCGGCAGGGATATCAACTTATCCCCTCTTGGTGTTGCAGGTCACATACTTCAAATGTGGTGGAGTGTCACTTGGTGTTGGCCTGGAACATCGTGTAGCAGATGGCCTTTCTGGTCTCCACTTTGTAAATACATGGTCTGATATTGCTCGAGGTCTTGACCTTACAATTCCACCATTCATTGACAGGACATTACTTCGTGCCCGAGACCCACCACAGCCTGCATTTGATCACATTGAATACCAACCTGATCCACCCATTAAAACTGGTACAAAAGCTGTAGGTGATGAGAGCGCAACGGTATCCATTTTTAGATTGACAAGGGAGCAGCTCAACATCTTGAAAGCCAAGTCTAAGGAAGATGGGAACACAATCAACTATACCACATATGAGATATTGGCAGGCCATGTTTGGAGATGTGCATCTGTGGCACGTGAACTTCCTGATGATCAAGAGACCAAACTACATATTGCAGTTGATGGAAGGTCCAGACTGCAACCCCCACTCCCACCTGGTTTCTTTGGCAATGTGGTTTTTGCAGGCGCACCAATTGCTGCAGCAGGGGATCTCAAATCAAAACCAACATGGTATGCTGCAAGCTGTATTCATGATACTGTTGTGCGTATGGACAACGATTATCTTAGATCAGCACTGGACTATCTTGAACTTCAGCCTGACCTGTCACCCCTTGTTCGCGGAGCTCATACTTTTAGGTGCCCGAGACTTGGAATAACTAGTTGGTCTAGGCTGCCGATCTATGATGCTGATTTCGGTTGGGGTCGACCTATTTTCATGGGGCCTGGTGGAATGGGATATGAGGGGTTGGCTTTTGTGTTACCAAGTGCAACAAATGATGGAAGTTTATCGGTGGCCATTTCTCTGCAATCTCAACATATGCAATCATTCTCCAAGTTGTTGTATGAGATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

477

Amino Acids

52.53

Weight (kDa)

6.08

Isoelectric Point (pI)

36.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	166, 286
Acc36I	ACCTGC	3 cut(s)	166, 286, 532
AccB1I	GGYRCC	2 cut(s)	351, 1215
AccI	GTMKAC	3 cut(s)	23, 234, 1282
AccII	CGCG	5 cut(s)	19, 378, 407, 461, 1197
AccIII	TCCGGA	1 cut(s)	477
AciI	CCGC	8 cut(s)	19, 113, 158, 293, 347, 376, 378, 1197
AclI	AACGTT	1 cut(s)	143
AclWI	GGATC	2 cut(s)	746, 1074
AcoI	YGGCCR	2 cut(s)	373, 1371
AcuI	CTGAAG	1 cut(s)	1154
AcvI	CACGTG	1 cut(s)	935
AcyI	GRCGYC	2 cut(s)	167, 352
AdeI	CACNNNGTG	1 cut(s)	578
AfaI	GTAC	1 cut(s)	772
AfiI	CCNNNNNNNGG	4 cut(s)	346, 347, 361, 1226
AgsI	TTSAA	4 cut(s)	556, 740, 844, 1166
AhlI	ACTAGT	1 cut(s)	1235
AjnI	CCWGG	4 cut(s)	201, 585, 1012, 1300
AjuI	GAANNNNNNNTTGG	2 cut(s)	1222, 1254
AluBI	AGCT	5 cut(s)	484, 779, 832, 1101, 1202
AluI	AGCT	5 cut(s)	484, 779, 832, 1101, 1202
Alw21I	GWGCWC	3 cut(s)	267, 303, 1204
Alw26I	GTCTC	6 cut(s)	158, 419, 623, 702, 950, 1216
Alw44I	GTGCAC	1 cut(s)	263
AlwI	GGATC	2 cut(s)	746, 1074
AlwNI	CAGNNNCTG	1 cut(s)	181
Ama87I	CYCGRG	4 cut(s)	470, 651, 705, 1219
Aor13HI	TCCGGA	1 cut(s)	477
AoxI	GGCC	8 cut(s)	95, 321, 373, 583, 607, 904, 1298, 1371
ApaLI	GTGCAC	1 cut(s)	263
ApeKI	GCWGC	5 cut(s)	829, 1055, 1058, 1094, 1249
ArsI	GACNNNNNNTTYG	2 cut(s)	57, 89
AspLEI	GCGC	7 cut(s)	313, 354, 407, 409, 463, 797, 1046
AspS9I	GGNCC	5 cut(s)	96, 199, 322, 987, 1298
AsuC2I	CCSGG	1 cut(s)	171
AsuHPI	GGTGA	6 cut(s)	98, 103, 160, 217, 797, 1176
AvaI	CYCGRG	4 cut(s)	470, 651, 705, 1219
AvaII	GGWCC	2 cut(s)	199, 987
BaeGI	GKGCMC	4 cut(s)	267, 333, 706, 1220
BaeI	ACNNNNGTAYC	2 cut(s)	1104, 1137
BalI	TGGCCA	1 cut(s)	1373
BanI	GGYRCC	2 cut(s)	351, 1215
BanII	GRGCYC	2 cut(s)	434, 1204
BauI	CACGAG	1 cut(s)	326
BbrPI	CACGTG	1 cut(s)	935
Bbv12I	GWGCWC	3 cut(s)	267, 303, 1204
BbvI	GCAGC	5 cut(s)	841, 1042, 1070, 1081, 1236
BccI	CCATC	7 cut(s)	103, 355, 446, 599, 857, 974, 1349
BceAI	ACGGC	2 cut(s)	388, 479
BcgI	CGANNNNNNTGC	2 cut(s)	307, 341
BciT130I	CCWGG	4 cut(s)	203, 587, 1014, 1302
BciVI	GTATCC	1 cut(s)	814
BclI	TGATCA	2 cut(s)	730, 949
BcnI	CCSGG	1 cut(s)	171
BcoDI	GTCTC	6 cut(s)	158, 419, 623, 702, 950, 1216
BcuI	ACTAGT	1 cut(s)	1235
BfaI	CTAG	2 cut(s)	1236, 1245
BfmI	CTRYAG	3 cut(s)	241, 780, 1056
BfoI	RGCGCY	2 cut(s)	314, 355
BfuAI	ACCTGC	3 cut(s)	166, 286, 532
BfuI	GTATCC	1 cut(s)	814
BisI	GCNGC	7 cut(s)	376, 379, 830, 1056, 1059, 1095, 1250
BlpI	GCTNAGC	1 cut(s)	314
BlsI	GCNGC	7 cut(s)	377, 380, 831, 1057, 1060, 1096, 1251
Bme1390I	CCNGG	5 cut(s)	171, 203, 587, 1014, 1302
Bme18I	GGWCC	2 cut(s)	199, 987
BmeT110I	CYCGRG	4 cut(s)	470, 651, 705, 1219
BmgT120I	GGNCC	5 cut(s)	96, 199, 322, 987, 1298
BmiI	GGNNCC	4 cut(s)	353, 433, 1217, 1299
BmrFI	CCNGG	5 cut(s)	171, 203, 587, 1014, 1302
BmsI	GCATC	2 cut(s)	932, 1252
BplI	GAGNNNNNCTC	2 cut(s)	416, 448
Bpu1102I	GCTNAGC	1 cut(s)	314
BpuEI	CTTGAG	1 cut(s)	287
BpuMI	CCSGG	1 cut(s)	171
BsaAI	YACGTR	1 cut(s)	935
BsaBI	GATNNNNATC	1 cut(s)	922
BsaHI	GRCGYC	2 cut(s)	167, 352
BsaI	GGTCTC	3 cut(s)	623, 702, 950
BsaJI	CCNNGG	3 cut(s)	170, 355, 376
BsaWI	WCCGGW	1 cut(s)	477
BsaXI	ACNNNNNCTCC	6 cut(s)	75, 105, 128, 158, 990, 1020
Bsc4I	CCNNNNNNNGG	4 cut(s)	346, 347, 361, 1226
Bse118I	RCCGGY	1 cut(s)	154
Bse1I	ACTGG	2 cut(s)	772, 1158
Bse3DI	GCAATG	1 cut(s)	1033
Bse8I	GATNNNNATC	1 cut(s)	922
BseAI	TCCGGA	1 cut(s)	477
BseBI	CCWGG	4 cut(s)	203, 587, 1014, 1302
BseDI	CCNNGG	3 cut(s)	170, 355, 376
BseGI	GGATG	4 cut(s)	10, 192, 366, 486
BseJI	GATNNNNATC	1 cut(s)	922
BseLI	CCNNNNNNNGG	4 cut(s)	346, 347, 361, 1226
BseMI	GCAATG	1 cut(s)	1033
BseNI	ACTGG	2 cut(s)	772, 1158
BsePI	GCGCGC	1 cut(s)	405
BseRI	GAGGAG	1 cut(s)	176
BseSI	GKGCMC	4 cut(s)	267, 333, 706, 1220
BseX3I	CGGCCG	1 cut(s)	373
BseXI	GCAGC	5 cut(s)	841, 1042, 1070, 1081, 1236
BseYI	CCCAGC	2 cut(s)	98, 490
Bsh1236I	CGCG	5 cut(s)	19, 378, 407, 461, 1197
Bsh1285I	CGRYCG	1 cut(s)	376
BshFI	GGCC	8 cut(s)	97, 323, 375, 585, 609, 906, 1300, 1373
BshNI	GGYRCC	2 cut(s)	351, 1215
BsiEI	CGRYCG	1 cut(s)	376
BsiHKAI	GWGCWC	3 cut(s)	267, 303, 1204
BsiHKCI	CYCGRG	4 cut(s)	470, 651, 705, 1219
BsiSI	CCGG	3 cut(s)	155, 170, 478
BslI	CCNNNNNNNGG	4 cut(s)	346, 347, 361, 1226
BsmAI	GTCTC	6 cut(s)	158, 419, 623, 702, 950, 1216
BsmBI	CGTCTC	2 cut(s)	158, 419
BsnI	GGCC	8 cut(s)	97, 323, 375, 585, 609, 906, 1300, 1373
Bso31I	GGTCTC	3 cut(s)	623, 702, 950
BsoBI	CYCGRG	4 cut(s)	470, 651, 705, 1219
Bsp1286I	GDGCHC	7 cut(s)	267, 303, 333, 434, 706, 1204, 1220
Bsp13I	TCCGGA	1 cut(s)	477
Bsp143I	GATC	7 cut(s)	384, 730, 751, 949, 1066, 1145, 1254
Bsp1720I	GCTNAGC	1 cut(s)	314
BspACI	CCGC	8 cut(s)	19, 113, 158, 293, 347, 376, 378, 1197
BspANI	GGCC	8 cut(s)	97, 323, 375, 585, 609, 906, 1300, 1373
BspEI	TCCGGA	1 cut(s)	477
BspFNI	CGCG	5 cut(s)	19, 378, 407, 461, 1197
BspHI	TCATGA	1 cut(s)	1108
BspLI	GGNNCC	4 cut(s)	353, 433, 1217, 1299
BspMAI	CTGCAG	1 cut(s)	1060
BspMI	ACCTGC	3 cut(s)	166, 286, 532
BspPI	GGATC	2 cut(s)	746, 1074
BspT107I	GGYRCC	2 cut(s)	351, 1215
BspTNI	GGTCTC	3 cut(s)	623, 702, 950
BsrDI	GCAATG	1 cut(s)	1033
BsrFI	RCCGGY	1 cut(s)	154
BsrI	ACTGG	2 cut(s)	772, 1158
BssAI	RCCGGY	1 cut(s)	154
BssECI	CCNNGG	3 cut(s)	170, 355, 376
BssHII	GCGCGC	1 cut(s)	405
BssMI	GATC	7 cut(s)	384, 730, 751, 949, 1066, 1145, 1254
BssNAI	GTATAC	1 cut(s)	24
BssNI	GRCGYC	2 cut(s)	167, 352
BssSI	CACGAG	1 cut(s)	326
BssT1I	CCWWGG	1 cut(s)	355
Bst1107I	GTATAC	1 cut(s)	24
Bst2BI	CACGAG	1 cut(s)	326
Bst2UI	CCWGG	4 cut(s)	203, 587, 1014, 1302
Bst4CI	ACNGT	4 cut(s)	260, 269, 802, 1117
BstACI	GRCGYC	2 cut(s)	167, 352
BstAPI	GCANNNNNTGC	1 cut(s)	1052
BstBAI	YACGTR	1 cut(s)	935
BstC8I	GCNNGC	7 cut(s)	156, 309, 407, 723, 904, 1042, 1099
BstDEI	CTNAG	3 cut(s)	314, 855, 1142
BstDSI	CCRYGG	1 cut(s)	376
BstF5I	GGATG	4 cut(s)	10, 192, 366, 486
BstFNI	CGCG	5 cut(s)	19, 378, 407, 461, 1197
BstH2I	RGCGCY	2 cut(s)	314, 355
BstHHI	GCGC	7 cut(s)	313, 354, 407, 409, 463, 797, 1046
BstKTI	GATC	7 cut(s)	387, 733, 754, 952, 1069, 1148, 1257
BstMAI	GTCTC	6 cut(s)	158, 419, 623, 702, 950, 1216
BstMBI	GATC	7 cut(s)	384, 730, 751, 949, 1066, 1145, 1254
BstMCI	CGRYCG	1 cut(s)	376
BstMWI	GCNNNNNNNGC	3 cut(s)	375, 929, 1052
BstNI	CCWGG	4 cut(s)	203, 587, 1014, 1302
BstSCI	CCNGG	5 cut(s)	169, 201, 585, 1012, 1300
BstSFI	CTRYAG	3 cut(s)	241, 780, 1056
BstSLI	GKGCMC	4 cut(s)	267, 333, 706, 1220
BstUI	CGCG	5 cut(s)	19, 378, 407, 461, 1197
BstV1I	GCAGC	5 cut(s)	841, 1042, 1070, 1081, 1236
BstX2I	RGATCY	1 cut(s)	1066
BstYI	RGATCY	1 cut(s)	1066
BstZ17I	GTATAC	1 cut(s)	24
BstZI	CGGCCG	1 cut(s)	373
BsuI	GTATCC	1 cut(s)	814
BsuRI	GGCC	8 cut(s)	97, 323, 375, 585, 609, 906, 1300, 1373
BtgI	CCRYGG	1 cut(s)	376
BtsCI	GGATG	4 cut(s)	10, 192, 366, 486
BtsI	GCAGTG	1 cut(s)	48
BtsIMutI	CAGTG	3 cut(s)	48, 265, 1151
BveI	ACCTGC	3 cut(s)	166, 286, 532
Cac8I	GCNNGC	7 cut(s)	156, 309, 407, 723, 904, 1042, 1099
CaiI	CAGNNNCTG	1 cut(s)	181
CciI	TCATGA	1 cut(s)	1108
CfoI	GCGC	7 cut(s)	313, 354, 407, 409, 463, 797, 1046
Cfr10I	RCCGGY	1 cut(s)	154
Cfr13I	GGNCC	5 cut(s)	96, 199, 322, 987, 1298
Cfr42I	CCGCGG	1 cut(s)	379
CseI	GACGC	2 cut(s)	175, 220
CsiI	ACCWGGT	2 cut(s)	201, 1012
Csp6I	GTAC	1 cut(s)	771
CspCI	CAANNNNNGTGG	2 cut(s)	544, 579
CviAII	CATG	5 cut(s)	636, 908, 1086, 1109, 1294
CviQI	GTAC	1 cut(s)	771
DdeI	CTNAG	3 cut(s)	314, 855, 1142
DinI	GGCGCC	1 cut(s)	353
DpnI	GATC	7 cut(s)	386, 732, 753, 951, 1068, 1147, 1256
DpnII	GATC	7 cut(s)	384, 730, 751, 949, 1066, 1145, 1254
DraIII	CACNNNGTG	1 cut(s)	578
EaeI	YGGCCR	2 cut(s)	373, 1371
EagI	CGGCCG	1 cut(s)	373
EciI	GGCGGA	1 cut(s)	173
Ecl136II	GAGCTC	1 cut(s)	1202
EclXI	CGGCCG	1 cut(s)	373
Eco130I	CCWWGG	1 cut(s)	355
Eco24I	GRGCYC	2 cut(s)	434, 1204
Eco31I	GGTCTC	3 cut(s)	623, 702, 950
Eco32I	GATATC	1 cut(s)	516
Eco47I	GGWCC	2 cut(s)	199, 987
Eco52I	CGGCCG	1 cut(s)	373
Eco53kI	GAGCTC	1 cut(s)	1202
Eco57I	CTGAAG	1 cut(s)	1154
Eco72I	CACGTG	1 cut(s)	935
Eco88I	CYCGRG	4 cut(s)	470, 651, 705, 1219
EcoICRI	GAGCTC	1 cut(s)	1202
EcoO109I	RGGNCCY	2 cut(s)	322, 1298
EcoRII	CCWGG	4 cut(s)	201, 585, 1012, 1300
EcoRV	GATATC	1 cut(s)	516
EcoT14I	CCWWGG	1 cut(s)	355
EcoT38I	GRGCYC	2 cut(s)	434, 1204
EgeI	GGCGCC	1 cut(s)	353
EheI	GGCGCC	1 cut(s)	353
ErhI	CCWWGG	1 cut(s)	355
Esp3I	CGTCTC	2 cut(s)	158, 419
FaeI	CATG	5 cut(s)	639, 911, 1089, 1112, 1297
FatI	CATG	5 cut(s)	635, 907, 1085, 1108, 1293
FauI	CCCGC	2 cut(s)	300, 340
FauNDI	CATATG	2 cut(s)	889, 1395
FbaI	TGATCA	2 cut(s)	730, 949
FblI	GTMKAC	3 cut(s)	23, 234, 1282
Fnu4HI	GCNGC	7 cut(s)	376, 379, 830, 1056, 1059, 1095, 1250
FokI	GGATG	4 cut(s)	17, 199, 373, 473
FriOI	GRGCYC	2 cut(s)	434, 1204
Fsp4HI	GCNGC	7 cut(s)	376, 379, 830, 1056, 1059, 1095, 1250
FspBI	CTAG	2 cut(s)	1236, 1245
GlaI	GCGC	7 cut(s)	312, 353, 406, 408, 462, 796, 1045
GluI	GCNGC	7 cut(s)	376, 379, 830, 1056, 1059, 1095, 1250
GsaI	CCCAGC	2 cut(s)	102, 494
HaeII	RGCGCY	2 cut(s)	314, 355
HaeIII	GGCC	8 cut(s)	97, 323, 375, 585, 609, 906, 1300, 1373
HapII	CCGG	3 cut(s)	155, 170, 478
HgaI	GACGC	2 cut(s)	175, 220
HhaI	GCGC	7 cut(s)	313, 354, 407, 409, 463, 797, 1046
Hin1I	GRCGYC	2 cut(s)	167, 352
Hin1II	CATG	5 cut(s)	639, 911, 1089, 1112, 1297
Hin6I	GCGC	7 cut(s)	311, 352, 405, 407, 461, 795, 1044
HinP1I	GCGC	7 cut(s)	311, 352, 405, 407, 461, 795, 1044
HincII	GTYRAC	3 cut(s)	121, 141, 1283
HindII	GTYRAC	3 cut(s)	121, 141, 1283
HinfI	GANTC	2 cut(s)	137, 466
HpaII	CCGG	3 cut(s)	155, 170, 478
HphI	GGTGA	6 cut(s)	98, 103, 160, 217, 797, 1176
Hpy166II	GTNNAC	7 cut(s)	24, 121, 141, 235, 265, 938, 1283
Hpy188I	TCNGA	2 cut(s)	400, 643
Hpy188III	TCNNGA	9 cut(s)	470, 478, 659, 841, 944, 953, 990, 1109, 1163
Hpy8I	GTNNAC	7 cut(s)	24, 121, 141, 235, 265, 938, 1283
HpyAV	CCTTC	5 cut(s)	52, 52, 343, 359, 978
HpyCH4III	ACNGT	4 cut(s)	260, 269, 802, 1117
HpyCH4IV	ACGT	3 cut(s)	123, 143, 934
HpyF10VI	GCNNNNNNNGC	3 cut(s)	375, 929, 1052
HpyF3I	CTNAG	3 cut(s)	314, 855, 1142
HpySE526I	ACGT	3 cut(s)	123, 143, 934
Hsp92I	GRCGYC	2 cut(s)	167, 352
Hsp92II	CATG	5 cut(s)	639, 911, 1089, 1112, 1297
HspAI	GCGC	7 cut(s)	311, 352, 405, 407, 461, 795, 1044
KasI	GGCGCC	1 cut(s)	351
Kpn2I	TCCGGA	1 cut(s)	477
KroI	GCCGGC	1 cut(s)	154
KroNI	GCCGGC	1 cut(s)	156
Ksp22I	TGATCA	2 cut(s)	730, 949
KspI	CCGCGG	1 cut(s)	379
Kzo9I	GATC	7 cut(s)	384, 730, 751, 949, 1066, 1145, 1254
LmnI	GCTCC	3 cut(s)	437, 826, 1199
Lsp1109I	GCAGC	5 cut(s)	841, 1042, 1070, 1081, 1236
LweI	GCATC	2 cut(s)	932, 1252
MabI	ACCWGGT	2 cut(s)	201, 1012
MaeI	CTAG	2 cut(s)	1236, 1245
MaeII	ACGT	3 cut(s)	123, 143, 934
MaeIII	GTNAC	4 cut(s)	544, 570, 1182, 1335
MalI	GATC	7 cut(s)	386, 732, 753, 951, 1068, 1147, 1256
MboI	GATC	7 cut(s)	384, 730, 751, 949, 1066, 1145, 1254
MboII	GAAGA	3 cut(s)	37, 277, 872
MfeI	CAATTG	1 cut(s)	1050
MflI	RGATCY	1 cut(s)	1066
MhlI	GDGCHC	7 cut(s)	267, 303, 333, 434, 706, 1204, 1220
MlsI	TGGCCA	1 cut(s)	1373
MluCI	AATT	3 cut(s)	394, 669, 1050
MluNI	TGGCCA	1 cut(s)	1373
Mly113I	GGCGCC	1 cut(s)	352
MlyI	GAGTC	2 cut(s)	146, 460
Mox20I	TGGCCA	1 cut(s)	1373
MroI	TCCGGA	1 cut(s)	477
MroNI	GCCGGC	1 cut(s)	154
MscI	TGGCCA	1 cut(s)	1373
MseI	TTAA	1 cut(s)	762
Msp20I	TGGCCA	1 cut(s)	1373
MspA1I	CMGCKG	1 cut(s)	378
MspI	CCGG	3 cut(s)	155, 170, 478
MspR9I	CCNGG	5 cut(s)	171, 203, 587, 1014, 1302
MunI	CAATTG	1 cut(s)	1050
MvaI	CCWGG	4 cut(s)	203, 587, 1014, 1302
MvnI	CGCG	5 cut(s)	19, 378, 407, 461, 1197
MwoI	GCNNNNNNNGC	3 cut(s)	375, 929, 1052
NaeI	GCCGGC	1 cut(s)	156
NarI	GGCGCC	1 cut(s)	352
NciI	CCSGG	1 cut(s)	171
NdeI	CATATG	2 cut(s)	889, 1395
NdeII	GATC	7 cut(s)	384, 730, 751, 949, 1066, 1145, 1254
NgoMIV	GCCGGC	1 cut(s)	154
NlaIII	CATG	5 cut(s)	639, 911, 1089, 1112, 1297
NlaIV	GGNNCC	4 cut(s)	353, 433, 1217, 1299
NmuCI	GTSAC	3 cut(s)	544, 570, 1182
PaeR7I	CTCGAG	2 cut(s)	470, 651
PagI	TCATGA	1 cut(s)	1108
PaqCI	CACCTGC	2 cut(s)	166, 286
PauI	GCGCGC	1 cut(s)	405
PcsI	WCGNNNNNNNCGW	1 cut(s)	378
PdiI	GCCGGC	1 cut(s)	156
PkrI	GCNGC	7 cut(s)	377, 380, 831, 1057, 1060, 1096, 1251
PleI	GAGTC	2 cut(s)	145, 460
PluTI	GGCGCC	1 cut(s)	355
PmaCI	CACGTG	1 cut(s)	935
PmlI	CACGTG	1 cut(s)	935
PpsI	GAGTC	2 cut(s)	145, 460
Ppu21I	YACGTR	1 cut(s)	935
Psp124BI	GAGCTC	1 cut(s)	1204
Psp1406I	AACGTT	1 cut(s)	143
Psp6I	CCWGG	4 cut(s)	201, 585, 1012, 1300
PspCI	CACGTG	1 cut(s)	935
PspFI	CCCAGC	2 cut(s)	98, 490
PspGI	CCWGG	4 cut(s)	201, 585, 1012, 1300
PspN4I	GGNNCC	4 cut(s)	353, 433, 1217, 1299
PspPI	GGNCC	5 cut(s)	96, 199, 322, 987, 1298
PspXI	VCTCGAGB	1 cut(s)	651
PstI	CTGCAG	1 cut(s)	1060
PstNI	CAGNNNCTG	1 cut(s)	181
PsuI	RGATCY	1 cut(s)	1066
PteI	GCGCGC	1 cut(s)	405
RsaI	GTAC	1 cut(s)	772
RsaNI	GTAC	1 cut(s)	771
SacI	GAGCTC	1 cut(s)	1204
SacII	CCGCGG	1 cut(s)	379
SalI	GTCGAC	1 cut(s)	1281
SaqAI	TTAA	1 cut(s)	762
SatI	GCNGC	7 cut(s)	376, 379, 830, 1056, 1059, 1095, 1250
Sau3AI	GATC	7 cut(s)	384, 730, 751, 949, 1066, 1145, 1254
Sau96I	GGNCC	5 cut(s)	96, 199, 322, 987, 1298
SchI	GAGTC	2 cut(s)	146, 460
ScrFI	CCNGG	5 cut(s)	171, 203, 587, 1014, 1302
SduI	GDGCHC	7 cut(s)	267, 303, 333, 434, 706, 1204, 1220
SexAI	ACCWGGT	2 cut(s)	201, 1012
SfaNI	GCATC	2 cut(s)	932, 1252
SfcI	CTRYAG	3 cut(s)	241, 780, 1056
SfoI	GGCGCC	1 cut(s)	353
Sfr274I	CTCGAG	2 cut(s)	470, 651
Sfr303I	CCGCGG	1 cut(s)	379
SgrBI	CCGCGG	1 cut(s)	379
SinI	GGWCC	2 cut(s)	199, 987
SlaI	CTCGAG	2 cut(s)	470, 651
SmlI	CTYRAG	3 cut(s)	302, 470, 651
SmoI	CTYRAG	3 cut(s)	302, 470, 651
SpeI	ACTAGT	1 cut(s)	1235
Sse9I	AATT	3 cut(s)	394, 669, 1050
SsiI	CCGC	8 cut(s)	19, 113, 158, 293, 347, 376, 378, 1197
SspDI	GGCGCC	1 cut(s)	351
SspMI	CTAG	2 cut(s)	1236, 1245
SstI	GAGCTC	1 cut(s)	1204
StyD4I	CCNGG	5 cut(s)	169, 201, 585, 1012, 1300
StyI	CCWWGG	1 cut(s)	355
TaaI	ACNGT	4 cut(s)	260, 269, 802, 1117
TaiI	ACGT	3 cut(s)	126, 146, 937
TaqI	TCGA	6 cut(s)	288, 387, 441, 471, 652, 1282
TasI	AATT	3 cut(s)	394, 669, 1050
TauI	GCSGC	2 cut(s)	378, 381
Tru1I	TTAA	1 cut(s)	762
Tru9I	TTAA	1 cut(s)	762
TscAI	CASTG	3 cut(s)	55, 265, 1158
TseFI	GTSAC	3 cut(s)	544, 570, 1182
TseI	GCWGC	5 cut(s)	829, 1055, 1058, 1094, 1249
Tsp45I	GTSAC	3 cut(s)	544, 570, 1182
TspDTI	ATGAA	3 cut(s)	670, 1097, 1282
TspRI	CASTG	3 cut(s)	55, 265, 1158
VneI	GTGCAC	1 cut(s)	263
VpaK11BI	GGWCC	2 cut(s)	199, 987
XcmI	CCANNNNNNNNNTGG	2 cut(s)	106, 199
XhoI	CTCGAG	2 cut(s)	470, 651
XmiI	GTMKAC	3 cut(s)	23, 234, 1282
XspI	CTAG	2 cut(s)	1236, 1245

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.