Prupe.3G101500_v2.0.a1

Shikimate O-hydroxycinnamoyltransferase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
7866225 .. 7868310
2086 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G101500.1

Sequence Viewer

Length: 1329 bp
ATGTCGGTCCACGTGAGAGTGAGGGAGTCAGTGGTGGTGAAGCCAGAGGAGGAAACGCCAAAACAGGCGCTGTGGATATCGCACTTGGATATCGTGATTTCGGCAACTCACCTTGGAAGTGTTTACTTCTACAGGAGGCCAAACGTTCAAAACGGCGCACATCATCTTCAAAACAACTGTGTCTTGGATTCGGAGGTGCTCAAGTGCTCCCTTGCCAAGGCCCTCGTGCCCTTCTACCCCTTGGCCGGCCGCCTGAAGCTGAACGATGAGGGACGTATCGAGATCGATTGCAATGGAGAGGGAGTGCTGTTTGTTGTGGCGGAGACTGACTCGGTCCTTGATGAGTTCGGGGACTTTGCGCCGACTCTTGAGTTCCGGAAGCTCGTTCCTGCTGTTGATTATTCCGCTGGGATATCCTCTTATCCCCTCTTGGTCGTACAGGTCACATACTTCAAATGTGGTGGATTGTCACTTGGTGTTGGCCTGGAACATCGTGTAGCAGATGGCTTTTCTGGTCTCCACTTTGTAAATACATGGTCTGATATCGCTCGAGGTCTTGACCTTACAATTCCACCATTCATCGACAGGACATTACTTCGTGCCCGAGACCCACCACAGCCTGCATTCGATCACATTGAATACCAACCTGATCCACCCATTAAAACCGGTACAAAAGCTGTAGGTGATGAGAGCGCAACGGTATCCATTTTTAGATTGACACGGGAGCAGCTCAACATCTTGAAAGCCAAGTCTAAGGAAGATGGGAACACAATCAACTATACCACATATGAGATGTTGGCAGGTCATATTTGGAGATGCGCATCCGTGGCACGTGAACTTCCTGATGATCAGGAGACCAAACTACATATTGCAGTTGATGGAAGGTCCAGACTGCAACCCCCCCTCCCTCCTGGTTTCTTCGGCAACGTGGTTTTTTCAGGCGCACCAATTGCTGCAGCAGGGGATATCAAATCAAAACCAACATGGTATGCTGCAAGCCGTATTCATGATGCTGTTGTGCGTATGGACAACAATTATCTTAGATCAGCGCTGGACTATCTTGAACTTCAGCCTGACCTGTTACCCCATGTTCGCGGAGCTCATACTTTTAGGTGCCCGAGACTTGCAATAACTAATTGGTCTAGGCTGCCGATCTATGATGCTGATTTCGGTTGGGGTCGACCTACTTTCATGGGGCCTGGTGGAATTGGATATGAGGGGTTGGCTTTTGTGTTACCAAGTGCAACAAATGATGGAAGTTTATCAGTGGTCATTTCTCTGCAATCTCAACGTATGAAATCATTCTCCAAGTTGTTGTATGAGATATAA

Protein Analysis

443

Amino Acids

48.93

Weight (kDa)

6.12

Isoelectric Point (pI)

38.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000233)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48930
fragaria_vesca FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 820
Acc36I ACCTGC 1 cut(s) 791
AccB1I GGYRCC 1 cut(s) 1113
AccI GTMKAC 1 cut(s) 1180
AccII CGCG 1 cut(s) 1095
AccIII TCCGGA 1 cut(s) 375
AciI CCGC 4 cut(s) 250, 320, 405, 1095
AclI AACGTT 1 cut(s) 144
AclWI GGATC 1 cut(s) 644
AcoI YGGCCR 2 cut(s) 243, 247
AcuI CTGAAG 2 cut(s) 275, 1052
AcvI CACGTG 2 cut(s) 13, 833
AdeI CACNNNGTG 1 cut(s) 476
AfaI GTAC 2 cut(s) 438, 670
AfeI AGCGCT 1 cut(s) 1050
AfiI CCNNNNNNNGG 2 cut(s) 217, 245
AgeI ACCGGT 1 cut(s) 665
AgsI TTSAA 6 cut(s) 149, 170, 454, 638, 742, 1064
AjnI CCWGG 3 cut(s) 483, 910, 1198
AluBI AGCT 5 cut(s) 259, 382, 677, 730, 1100
AluI AGCT 5 cut(s) 259, 382, 677, 730, 1100
Alw21I GWGCWC 3 cut(s) 201, 209, 1102
Alw26I GTCTC 5 cut(s) 317, 521, 600, 848, 1114
AlwI GGATC 1 cut(s) 644
AlwNI CAGNNNCTG 1 cut(s) 70
Ama87I CYCGRG 3 cut(s) 549, 603, 1117
Aor13HI TCCGGA 1 cut(s) 375
Aor51HI AGCGCT 1 cut(s) 1050
AoxI GGCC 6 cut(s) 137, 219, 243, 247, 481, 1196
ApeKI GCWGC 5 cut(s) 727, 953, 956, 992, 1147
AsiGI ACCGGT 1 cut(s) 665
Asp700I GAANNNNTTC 1 cut(s) 1301
AspLEI GCGC 7 cut(s) 70, 158, 361, 695, 821, 944, 1051
AspS9I GGNCC 5 cut(s) 7, 220, 334, 885, 1196
AsuHPI GGTGA 3 cut(s) 49, 101, 695
AvaI CYCGRG 3 cut(s) 549, 603, 1117
AvaII GGWCC 3 cut(s) 7, 334, 885
BaeGI GKGCMC 3 cut(s) 231, 604, 1118
BanI GGYRCC 1 cut(s) 1113
BanII GRGCYC 1 cut(s) 1102
BauI CACGAG 1 cut(s) 224
BbrPI CACGTG 2 cut(s) 13, 833
Bbv12I GWGCWC 3 cut(s) 201, 209, 1102
BbvI GCAGC 5 cut(s) 739, 940, 968, 979, 1134
BccI CCATC 4 cut(s) 497, 755, 872, 1247
BceAI ACGGC 2 cut(s) 169, 984
BciT130I CCWGG 3 cut(s) 485, 912, 1200
BciVI GTATCC 1 cut(s) 712
BclI TGATCA 1 cut(s) 847
BcoDI GTCTC 5 cut(s) 317, 521, 600, 848, 1114
BfaI CTAG 1 cut(s) 1143
BfmI CTRYAG 3 cut(s) 130, 678, 954
BfoI RGCGCY 2 cut(s) 71, 1052
BfuAI ACCTGC 1 cut(s) 791
BfuI GTATCC 1 cut(s) 712
BisI GCNGC 6 cut(s) 250, 728, 954, 957, 993, 1148
BlsI GCNGC 6 cut(s) 251, 729, 955, 958, 994, 1149
Bme1390I CCNGG 3 cut(s) 485, 912, 1200
Bme18I GGWCC 3 cut(s) 7, 334, 885
BmeT110I CYCGRG 3 cut(s) 549, 603, 1117
BmgT120I GGNCC 5 cut(s) 7, 220, 334, 885, 1196
BmiI GGNNCC 2 cut(s) 1115, 1197
BmrFI CCNGG 3 cut(s) 485, 912, 1200
BmsI GCATC 4 cut(s) 806, 830, 1000, 1150
BplI GAGNNNNNCTC 2 cut(s) 314, 346
BpuEI CTTGAG 2 cut(s) 185, 389
Bsa29I ATCGAT 1 cut(s) 285
BsaAI YACGTR 2 cut(s) 13, 833
BsaBI GATNNNNATC 1 cut(s) 820
BsaI GGTCTC 3 cut(s) 521, 600, 848
BsaJI CCNNGG 4 cut(s) 112, 216, 240, 825
BsaWI WCCGGW 2 cut(s) 375, 665
BsaXI ACNNNNNCTCC 4 cut(s) 288, 318, 888, 918
Bsc4I CCNNNNNNNGG 2 cut(s) 217, 245
Bse118I RCCGGY 2 cut(s) 245, 665
Bse3DI GCAATG 1 cut(s) 298
Bse8I GATNNNNATC 1 cut(s) 820
BseAI TCCGGA 1 cut(s) 375
BseBI CCWGG 3 cut(s) 485, 912, 1200
BseCI ATCGAT 1 cut(s) 285
BseDI CCNNGG 4 cut(s) 112, 216, 240, 825
BseGI GGATG 1 cut(s) 821
BseJI GATNNNNATC 1 cut(s) 820
BseLI CCNNNNNNNGG 2 cut(s) 217, 245
BseMI GCAATG 1 cut(s) 298
BseRI GAGGAG 1 cut(s) 62
BseSI GKGCMC 3 cut(s) 231, 604, 1118
BseX3I CGGCCG 1 cut(s) 247
BseXI GCAGC 5 cut(s) 739, 940, 968, 979, 1134
BseYI CCCAGC 1 cut(s) 407
Bsh1236I CGCG 1 cut(s) 1095
Bsh1285I CGRYCG 1 cut(s) 250
BshFI GGCC 6 cut(s) 139, 221, 245, 249, 483, 1198
BshNI GGYRCC 1 cut(s) 1113
BshTI ACCGGT 1 cut(s) 665
BshVI ATCGAT 1 cut(s) 285
BsiEI CGRYCG 1 cut(s) 250
BsiHKAI GWGCWC 3 cut(s) 201, 209, 1102
BsiHKCI CYCGRG 3 cut(s) 549, 603, 1117
BsiSI CCGG 3 cut(s) 246, 376, 666
BslFI GGGAC 2 cut(s) 285, 365
BslI CCNNNNNNNGG 2 cut(s) 217, 245
BsmAI GTCTC 5 cut(s) 317, 521, 600, 848, 1114
BsmFI GGGAC 2 cut(s) 285, 365
BsmI GAATGC 1 cut(s) 623
BsnI GGCC 6 cut(s) 139, 221, 245, 249, 483, 1198
Bso31I GGTCTC 3 cut(s) 521, 600, 848
BsoBI CYCGRG 3 cut(s) 549, 603, 1117
Bsp1286I GDGCHC 6 cut(s) 201, 209, 231, 604, 1102, 1118
Bsp13I TCCGGA 1 cut(s) 375
Bsp143I GATC 6 cut(s) 282, 628, 649, 847, 1043, 1152
BspACI CCGC 4 cut(s) 250, 320, 405, 1095
BspANI GGCC 6 cut(s) 139, 221, 245, 249, 483, 1198
BspDI ATCGAT 1 cut(s) 285
BspEI TCCGGA 1 cut(s) 375
BspFNI CGCG 1 cut(s) 1095
BspHI TCATGA 1 cut(s) 1006
BspLI GGNNCC 2 cut(s) 1115, 1197
BspMAI CTGCAG 1 cut(s) 958
BspMI ACCTGC 1 cut(s) 791
BspPI GGATC 1 cut(s) 644
BspT107I GGYRCC 1 cut(s) 1113
BspTNI GGTCTC 3 cut(s) 521, 600, 848
BsrDI GCAATG 1 cut(s) 298
BsrFI RCCGGY 2 cut(s) 245, 665
BssAI RCCGGY 2 cut(s) 245, 665
BssECI CCNNGG 4 cut(s) 112, 216, 240, 825
BssMI GATC 6 cut(s) 282, 628, 649, 847, 1043, 1152
BssSI CACGAG 1 cut(s) 224
BssT1I CCWWGG 3 cut(s) 112, 216, 240
Bst2BI CACGAG 1 cut(s) 224
Bst2UI CCWGG 3 cut(s) 485, 912, 1200
Bst4CI ACNGT 2 cut(s) 179, 700
BstAPI GCANNNNNTGC 1 cut(s) 950
BstBAI YACGTR 2 cut(s) 13, 833
BstC8I GCNNGC 3 cut(s) 247, 621, 997
BstDEI CTNAG 2 cut(s) 753, 1040
BstDSI CCRYGG 1 cut(s) 825
BstENI CCTNNNNNAGG 1 cut(s) 215
BstF5I GGATG 1 cut(s) 821
BstFNI CGCG 1 cut(s) 1095
BstH2I RGCGCY 2 cut(s) 71, 1052
BstHHI GCGC 7 cut(s) 70, 158, 361, 695, 821, 944, 1051
BstKTI GATC 6 cut(s) 285, 631, 652, 850, 1046, 1155
BstMAI GTCTC 5 cut(s) 317, 521, 600, 848, 1114
BstMBI GATC 6 cut(s) 282, 628, 649, 847, 1043, 1152
BstMCI CGRYCG 1 cut(s) 250
BstMWI GCNNNNNNNGC 2 cut(s) 827, 950
BstNI CCWGG 3 cut(s) 485, 912, 1200
BstSCI CCNGG 3 cut(s) 483, 910, 1198
BstSFI CTRYAG 3 cut(s) 130, 678, 954
BstSLI GKGCMC 3 cut(s) 231, 604, 1118
BstUI CGCG 1 cut(s) 1095
BstV1I GCAGC 5 cut(s) 739, 940, 968, 979, 1134
BstZI CGGCCG 1 cut(s) 247
Bsu15I ATCGAT 1 cut(s) 285
BsuI GTATCC 1 cut(s) 712
BsuRI GGCC 6 cut(s) 139, 221, 245, 249, 483, 1198
BsuTUI ATCGAT 1 cut(s) 285
BtgI CCRYGG 1 cut(s) 825
BtsCI GGATG 1 cut(s) 821
BtsIMutI CAGTG 2 cut(s) 36, 1272
BveI ACCTGC 1 cut(s) 791
Cac8I GCNNGC 3 cut(s) 247, 621, 997
CaiI CAGNNNCTG 1 cut(s) 70
CciI TCATGA 1 cut(s) 1006
CfoI GCGC 7 cut(s) 70, 158, 361, 695, 821, 944, 1051
Cfr10I RCCGGY 2 cut(s) 245, 665
Cfr13I GGNCC 5 cut(s) 7, 220, 334, 885, 1196
ClaI ATCGAT 1 cut(s) 285
Csp6I GTAC 2 cut(s) 437, 669
CspAI ACCGGT 1 cut(s) 665
CspCI CAANNNNNGTGG 2 cut(s) 442, 477
CviAII CATG 5 cut(s) 534, 984, 1007, 1088, 1192
CviQI GTAC 2 cut(s) 437, 669
DdeI CTNAG 2 cut(s) 753, 1040
DpnI GATC 6 cut(s) 284, 630, 651, 849, 1045, 1154
DpnII GATC 6 cut(s) 282, 628, 649, 847, 1043, 1152
DraIII CACNNNGTG 1 cut(s) 476
EaeI YGGCCR 2 cut(s) 243, 247
EagI CGGCCG 1 cut(s) 247
EciI GGCGGA 1 cut(s) 335
Ecl136II GAGCTC 1 cut(s) 1100
EclXI CGGCCG 1 cut(s) 247
Eco130I CCWWGG 3 cut(s) 112, 216, 240
Eco24I GRGCYC 1 cut(s) 1102
Eco31I GGTCTC 3 cut(s) 521, 600, 848
Eco32I GATATC 5 cut(s) 78, 91, 414, 544, 967
Eco47I GGWCC 3 cut(s) 7, 334, 885
Eco47III AGCGCT 1 cut(s) 1050
Eco52I CGGCCG 1 cut(s) 247
Eco53kI GAGCTC 1 cut(s) 1100
Eco57I CTGAAG 2 cut(s) 275, 1052
Eco72I CACGTG 2 cut(s) 13, 833
Eco88I CYCGRG 3 cut(s) 549, 603, 1117
EcoICRI GAGCTC 1 cut(s) 1100
EcoNI CCTNNNNNAGG 1 cut(s) 215
EcoO109I RGGNCCY 2 cut(s) 220, 1196
EcoRII CCWGG 3 cut(s) 483, 910, 1198
EcoRV GATATC 5 cut(s) 78, 91, 414, 544, 967
EcoT14I CCWWGG 3 cut(s) 112, 216, 240
EcoT38I GRGCYC 1 cut(s) 1102
ErhI CCWWGG 3 cut(s) 112, 216, 240
FaeI CATG 5 cut(s) 537, 987, 1010, 1091, 1195
FaqI GGGAC 2 cut(s) 285, 365
FatI CATG 5 cut(s) 533, 983, 1006, 1087, 1191
FauNDI CATATG 1 cut(s) 787
FbaI TGATCA 1 cut(s) 847
FblI GTMKAC 1 cut(s) 1180
Fnu4HI GCNGC 6 cut(s) 250, 728, 954, 957, 993, 1148
FokI GGATG 1 cut(s) 808
FriOI GRGCYC 1 cut(s) 1102
FseI GGCCGGCC 1 cut(s) 249
Fsp4HI GCNGC 6 cut(s) 250, 728, 954, 957, 993, 1148
FspAI RTGCGCAY 1 cut(s) 820
FspBI CTAG 1 cut(s) 1143
FspI TGCGCA 1 cut(s) 820
GlaI GCGC 7 cut(s) 69, 157, 360, 694, 820, 943, 1050
GluI GCNGC 6 cut(s) 250, 728, 954, 957, 993, 1148
GsaI CCCAGC 1 cut(s) 411
HaeII RGCGCY 2 cut(s) 71, 1052
HaeIII GGCC 6 cut(s) 139, 221, 245, 249, 483, 1198
HapII CCGG 3 cut(s) 246, 376, 666
HhaI GCGC 7 cut(s) 70, 158, 361, 695, 821, 944, 1051
Hin1II CATG 5 cut(s) 537, 987, 1010, 1091, 1195
Hin6I GCGC 7 cut(s) 68, 156, 359, 693, 819, 942, 1049
HinP1I GCGC 7 cut(s) 68, 156, 359, 693, 819, 942, 1049
HincII GTYRAC 1 cut(s) 1181
HindII GTYRAC 1 cut(s) 1181
HinfI GANTC 4 cut(s) 26, 188, 329, 364
HpaII CCGG 3 cut(s) 246, 376, 666
HphI GGTGA 3 cut(s) 49, 101, 695
Hpy166II GTNNAC 4 cut(s) 10, 124, 836, 1181
Hpy188I TCNGA 2 cut(s) 193, 541
Hpy8I GTNNAC 4 cut(s) 10, 124, 836, 1181
HpyAV CCTTC 2 cut(s) 241, 876
HpyCH4III ACNGT 2 cut(s) 179, 700
HpyCH4IV ACGT 6 cut(s) 12, 144, 274, 832, 927, 1291
HpyCH4V TGCA 9 cut(s) 291, 623, 872, 895, 956, 995, 1127, 1244, 1282
HpyF10VI GCNNNNNNNGC 2 cut(s) 827, 950
HpyF3I CTNAG 2 cut(s) 753, 1040
HpySE526I ACGT 6 cut(s) 12, 144, 274, 832, 927, 1291
Hsp92II CATG 5 cut(s) 537, 987, 1010, 1091, 1195
HspAI GCGC 7 cut(s) 68, 156, 359, 693, 819, 942, 1049
Kpn2I TCCGGA 1 cut(s) 375
KroI GCCGGC 1 cut(s) 245
KroNI GCCGGC 1 cut(s) 247
Ksp22I TGATCA 1 cut(s) 847
Kzo9I GATC 6 cut(s) 282, 628, 649, 847, 1043, 1152
LmnI GCTCC 3 cut(s) 212, 724, 1097
Lsp1109I GCAGC 5 cut(s) 739, 940, 968, 979, 1134
LweI GCATC 4 cut(s) 806, 830, 1000, 1150
MaeI CTAG 1 cut(s) 1143
MaeII ACGT 6 cut(s) 12, 144, 274, 832, 927, 1291
MaeIII GTNAC 4 cut(s) 442, 468, 1080, 1233
MalI GATC 6 cut(s) 284, 630, 651, 849, 1045, 1154
MboI GATC 6 cut(s) 282, 628, 649, 847, 1043, 1152
MboII GAAGA 3 cut(s) 158, 770, 910
MfeI CAATTG 1 cut(s) 948
MhlI GDGCHC 6 cut(s) 201, 209, 231, 604, 1102, 1118
MluCI AATT 5 cut(s) 567, 948, 1033, 1135, 1206
MlyI GAGTC 3 cut(s) 35, 323, 358
MroI TCCGGA 1 cut(s) 375
MroNI GCCGGC 1 cut(s) 245
MroXI GAANNNNTTC 1 cut(s) 1301
MseI TTAA 1 cut(s) 660
MspA1I CMGCKG 1 cut(s) 407
MspI CCGG 3 cut(s) 246, 376, 666
MspR9I CCNGG 3 cut(s) 485, 912, 1200
MunI CAATTG 1 cut(s) 948
Mva1269I GAATGC 1 cut(s) 623
MvaI CCWGG 3 cut(s) 485, 912, 1200
MvnI CGCG 1 cut(s) 1095
MwoI GCNNNNNNNGC 2 cut(s) 827, 950
NaeI GCCGGC 1 cut(s) 247
NdeI CATATG 1 cut(s) 787
NdeII GATC 6 cut(s) 282, 628, 649, 847, 1043, 1152
NgoMIV GCCGGC 1 cut(s) 245
NlaIII CATG 5 cut(s) 537, 987, 1010, 1091, 1195
NlaIV GGNNCC 2 cut(s) 1115, 1197
NmuCI GTSAC 2 cut(s) 442, 468
NsbI TGCGCA 1 cut(s) 820
PaeR7I CTCGAG 1 cut(s) 549
PagI TCATGA 1 cut(s) 1006
PctI GAATGC 1 cut(s) 623
PdiI GCCGGC 1 cut(s) 247
PdmI GAANNNNTTC 1 cut(s) 1301
PfeI GAWTC 1 cut(s) 188
PflFI GACNNNGTC 1 cut(s) 332
PinAI ACCGGT 1 cut(s) 665
PkrI GCNGC 6 cut(s) 251, 729, 955, 958, 994, 1149
PleI GAGTC 3 cut(s) 34, 323, 358
PmaCI CACGTG 2 cut(s) 13, 833
PmlI CACGTG 2 cut(s) 13, 833
PpsI GAGTC 3 cut(s) 34, 323, 358
Ppu21I YACGTR 2 cut(s) 13, 833
Psp124BI GAGCTC 1 cut(s) 1102
Psp1406I AACGTT 1 cut(s) 144
Psp6I CCWGG 3 cut(s) 483, 910, 1198
PspCI CACGTG 2 cut(s) 13, 833
PspFI CCCAGC 1 cut(s) 407
PspGI CCWGG 3 cut(s) 483, 910, 1198
PspN4I GGNNCC 2 cut(s) 1115, 1197
PspPI GGNCC 5 cut(s) 7, 220, 334, 885, 1196
PspXI VCTCGAGB 1 cut(s) 549
PstI CTGCAG 1 cut(s) 958
PstNI CAGNNNCTG 1 cut(s) 70
PsyI GACNNNGTC 1 cut(s) 332
RigI GGCCGGCC 1 cut(s) 249
RsaI GTAC 2 cut(s) 438, 670
RsaNI GTAC 2 cut(s) 437, 669
SacI GAGCTC 1 cut(s) 1102
SalI GTCGAC 1 cut(s) 1179
SaqAI TTAA 1 cut(s) 660
SatI GCNGC 6 cut(s) 250, 728, 954, 957, 993, 1148
Sau3AI GATC 6 cut(s) 282, 628, 649, 847, 1043, 1152
Sau96I GGNCC 5 cut(s) 7, 220, 334, 885, 1196
SchI GAGTC 3 cut(s) 35, 323, 358
ScrFI CCNGG 3 cut(s) 485, 912, 1200
SduI GDGCHC 6 cut(s) 201, 209, 231, 604, 1102, 1118
SfaNI GCATC 4 cut(s) 806, 830, 1000, 1150
SfcI CTRYAG 3 cut(s) 130, 678, 954
Sfr274I CTCGAG 1 cut(s) 549
SinI GGWCC 3 cut(s) 7, 334, 885
SlaI CTCGAG 1 cut(s) 549
SmlI CTYRAG 3 cut(s) 200, 368, 549
SmoI CTYRAG 3 cut(s) 200, 368, 549
Sse9I AATT 5 cut(s) 567, 948, 1033, 1135, 1206
SsiI CCGC 4 cut(s) 250, 320, 405, 1095
SspMI CTAG 1 cut(s) 1143
SstI GAGCTC 1 cut(s) 1102
StyD4I CCNGG 3 cut(s) 483, 910, 1198
StyI CCWWGG 3 cut(s) 112, 216, 240
TaaI ACNGT 2 cut(s) 179, 700
TaiI ACGT 6 cut(s) 15, 147, 277, 835, 930, 1294
TaqI TCGA 6 cut(s) 279, 285, 550, 582, 627, 1180
TaqII GACCGA 1 cut(s) 322
TasI AATT 5 cut(s) 567, 948, 1033, 1135, 1206
TauI GCSGC 1 cut(s) 252
TfiI GAWTC 1 cut(s) 188
Tru1I TTAA 1 cut(s) 660
Tru9I TTAA 1 cut(s) 660
TscAI CASTG 2 cut(s) 36, 1272
TseFI GTSAC 2 cut(s) 442, 468
TseI GCWGC 5 cut(s) 727, 953, 956, 992, 1147
Tsp45I GTSAC 2 cut(s) 442, 468
TspDTI ATGAA 4 cut(s) 568, 995, 1180, 1310
TspGWI ACGGA 1 cut(s) 814
TspRI CASTG 2 cut(s) 36, 1272
Tth111I GACNNNGTC 1 cut(s) 332
VpaK11BI GGWCC 3 cut(s) 7, 334, 885
XagI CCTNNNNNAGG 1 cut(s) 215
XhoI CTCGAG 1 cut(s) 549
XmiI GTMKAC 1 cut(s) 1180
XmnI GAANNNNTTC 1 cut(s) 1301
XspI CTAG 1 cut(s) 1143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.