Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Forward (+)

72805047 .. 72807327

Gene Structure 2281 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG453900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1443 bp

ATGCAGATACAAGGAGCTTGGCTATATGAGCTTTTAAGCCCAGGTCCAGGGCTTCTAACTTCCAAGGAATCGAAGATGGCAGTCAACGTTAGCATGAGAGAGACAACGGTAGTGAGGCCAGCAGCGGCGACTCCTCGGCAGTCGCTTTGGATCTCAAACTTGGATAAGGCGATGCCCAACACTCACACTCCCCTTATTTATTTCTACAAGCCAAACAACATTGCTGGTGCAGGCACGGACAACAATTTCTTTGACATGCGCGTGTTGAAGGTGGCGCTCAGCAAGGCCCTCGTGCCCTTTTACCCTTTGGCCGGCCGCCTACGGCAGAAAAAGGATGAGGGAGAGAATGGCCGTATCGAAATCGATTGCAATGCAGAGGGGGCCTTGTTTGCTGTGGCCGATAGCAGCTCTTGCATTAGTGATTTTGGTGATTTTGTGCCCACTCCTGAATTTGGGAGAGGGCTTGTCCCTATGGTTGATTATTCAGCTGGGATATCTTCTTTTCCCTTGTTGCTGGTTCAGATCACATACTTGAAATATGGTGGAGTGGCACTTGGTCTTCGAGTGGACCATCGAGTAGCAGATGGATTCTCTACCTTCCACTTCGTAAATACATGGTCTGATATGGCTCGTGGTTTCGAGGTTGCAATTCGGCCAAGCATGGACAGGACGATACTTCGTGCCCGAGACCCACCTCGGCCTTTACCCGACCACATTCACCACATTGCATACCCTCGTCGGAATAAGCACGAGAGCACTGCAGCAACAAACGTTACAAATTTTAGATTTACAAGGGAGCAGCTCAATGTCTTGAAAGCTATGTCAACCATGACTATAGCGGATGACGATGATATGAACACCTTACCAGTCAAGTTTACCACATTTGAGGTGCTTGCAGGTCATGTATGGAGATGTGCCTGCAAGGCACGTGAACTAGCTAATGATCAAGAAACTGTATTATACCTTACTGTAAATGGAAGGTCCAGATTACAACCCCCTCTGCCACCTGGTTACTTTGGTAATGTGGTCTTCAGAGCGACAGCAATAGCCTTAGCAGGGGATCTCATATCGAAACCAATATGGTATGCCGCAGGCTGTGTTCACAATGCTTTGGTGCGTATGGACGATGATTATCTTCGATCAGCAATTGACTACCTTGAACTTCAGCAGCGTCATCAGGAACTGTCAAGCCTTGCTCATGGGACTCATGTCAGGTGTCCTAATCTTGGGATAAACAGCTTGTGTACATTGCCCATCTATGAAGCTAATTTTGGGTGGGGTAGACCAATTTCCGCTGGGCGTTCTGGAATTCGAAGTGAAGGGAAGGGCTATGTGCAACCTAGTGCAACCGATGATGGGAGTTTGTCACTGTCCATTAGTCTGCAATCTCAGCATATGATATCATTTTCCAAGAATGTCTTGCTTAACCATCCCCGGATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

480

Amino Acids

53.19

Weight (kDa)

8.58

Isoelectric Point (pI)

41.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	29 - 472	4.1e-97	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	887
AccI	GTMKAC	1 cut(s)	1282
AccII	CGCG	1 cut(s)	261
AciI	CCGC	5 cut(s)	125, 316, 839, 1089, 1293
AclI	AACGTT	2 cut(s)	87, 771
AclWI	GGATC	2 cut(s)	158, 1068
AcoI	YGGCCR	5 cut(s)	309, 313, 349, 396, 653
AcsI	RAATTY	3 cut(s)	449, 778, 1308
AcuI	CTGAAG	2 cut(s)	1015, 1148
AcvI	CACGTG	1 cut(s)	929
AfaI	GTAC	1 cut(s)	1246
AfiI	CCNNNNNNNGG	6 cut(s)	47, 311, 452, 1056, 1226, 1356
AgsI	TTSAA	4 cut(s)	268, 535, 814, 1160
AjnI	CCWGG	3 cut(s)	40, 46, 1006
AjuI	GAANNNNNNNTTGG	2 cut(s)	1254, 1286
AluBI	AGCT	9 cut(s)	17, 31, 408, 488, 802, 818, 938, 1239, 1265
AluI	AGCT	9 cut(s)	17, 31, 408, 488, 802, 818, 938, 1239, 1265
Alw21I	GWGCWC	1 cut(s)	758
Alw26I	GTCTC	2 cut(s)	95, 681
AlwI	GGATC	2 cut(s)	158, 1068
AlwNI	CAGNNNCTG	1 cut(s)	1183
Ama87I	CYCGRG	1 cut(s)	684
AoxI	GGCC	9 cut(s)	116, 285, 309, 313, 349, 381, 396, 653, 698
ApeKI	GCWGC	5 cut(s)	122, 405, 761, 799, 1168
ApoI	RAATTY	3 cut(s)	449, 778, 1308
AspLEI	GCGC	2 cut(s)	261, 277
AspS9I	GGNCC	5 cut(s)	44, 286, 381, 568, 981
AsuC2I	CCSGG	1 cut(s)	1435
AsuHPI	GGTGA	2 cut(s)	440, 710
AsuII	TTCGAA	1 cut(s)	1312
AvaI	CYCGRG	1 cut(s)	684
AvaII	GGWCC	3 cut(s)	44, 568, 981
BaeGI	GKGCMC	3 cut(s)	297, 441, 685
BauI	CACGAG	3 cut(s)	290, 630, 749
BbrPI	CACGTG	1 cut(s)	929
BbsI	GAAGAC	2 cut(s)	551, 1021
Bbv12I	GWGCWC	1 cut(s)	758
BbvI	GCAGC	5 cut(s)	134, 417, 773, 811, 1180
BccI	CCATC	6 cut(s)	70, 578, 579, 1262, 1349, 1437
BceAI	ACGGC	2 cut(s)	336, 338
BcgI	CGANNNNNNTGC	6 cut(s)	271, 305, 353, 387, 740, 774
BciT130I	CCWGG	3 cut(s)	42, 48, 1008
BclI	TGATCA	1 cut(s)	943
BcnI	CCSGG	1 cut(s)	1435
BcoDI	GTCTC	2 cut(s)	95, 681
BfaI	CTAG	2 cut(s)	935, 1341
BfmI	CTRYAG	2 cut(s)	759, 834
BfoI	RGCGCY	1 cut(s)	278
BfuAI	ACCTGC	1 cut(s)	887
BglI	GCCNNNNNGGC	1 cut(s)	923
BisI	GCNGC	8 cut(s)	123, 126, 316, 406, 762, 800, 1089, 1169
BlpI	GCTNAGC	1 cut(s)	278
BlsI	GCNGC	8 cut(s)	124, 127, 317, 407, 763, 801, 1090, 1170
Bme1390I	CCNGG	4 cut(s)	42, 48, 1008, 1435
Bme18I	GGWCC	3 cut(s)	44, 568, 981
BmeT110I	CYCGRG	1 cut(s)	684
BmgT120I	GGNCC	5 cut(s)	44, 286, 381, 568, 981
BmiI	GGNNCC	1 cut(s)	382
BmrFI	CCNGG	4 cut(s)	42, 48, 1008, 1435
BmsI	GCATC	1 cut(s)	162
BoxI	GACNNNNGTC	1 cut(s)	1208
BpiI	GAAGAC	2 cut(s)	551, 1021
Bpu10I	CCTNAGC	1 cut(s)	1051
Bpu1102I	GCTNAGC	1 cut(s)	278
Bpu14I	TTCGAA	1 cut(s)	1312
BpuMI	CCSGG	1 cut(s)	1435
Bsa29I	ATCGAT	1 cut(s)	363
BsaAI	YACGTR	1 cut(s)	929
BsaBI	GATNNNNATC	1 cut(s)	1131
BsaI	GGTCTC	1 cut(s)	681
BsaJI	CCNNGG	6 cut(s)	40, 47, 63, 134, 695, 1433
BsaXI	ACNNNNNCTCC	2 cut(s)	172, 202
Bsc4I	CCNNNNNNNGG	6 cut(s)	47, 311, 452, 1056, 1226, 1356
Bse118I	RCCGGY	1 cut(s)	311
Bse1I	ACTGG	1 cut(s)	866
Bse3DI	GCAATG	4 cut(s)	219, 376, 723, 1247
Bse8I	GATNNNNATC	1 cut(s)	1131
BseBI	CCWGG	3 cut(s)	42, 48, 1008
BseCI	ATCGAT	1 cut(s)	363
BseDI	CCNNGG	6 cut(s)	40, 47, 63, 134, 695, 1433
BseGI	GGATG	4 cut(s)	340, 847, 1429, 1443
BseJI	GATNNNNATC	1 cut(s)	1131
BseLI	CCNNNNNNNGG	6 cut(s)	47, 311, 452, 1056, 1226, 1356
BseMI	GCAATG	4 cut(s)	219, 376, 723, 1247
BseMII	CTCAG	2 cut(s)	292, 1403
BseNI	ACTGG	1 cut(s)	866
BseRI	GAGGAG	1 cut(s)	123
BseSI	GKGCMC	3 cut(s)	297, 441, 685
BseX3I	CGGCCG	1 cut(s)	313
BseXI	GCAGC	5 cut(s)	134, 417, 773, 811, 1180
BseYI	CCCAGC	2 cut(s)	488, 1295
BsgI	GTGCAG	1 cut(s)	249
Bsh1236I	CGCG	1 cut(s)	261
Bsh1285I	CGRYCG	1 cut(s)	316
BshFI	GGCC	9 cut(s)	118, 287, 311, 315, 351, 383, 398, 655, 700
BshVI	ATCGAT	1 cut(s)	363
BsiEI	CGRYCG	1 cut(s)	316
BsiHKAI	GWGCWC	1 cut(s)	758
BsiHKCI	CYCGRG	1 cut(s)	684
BsiSI	CCGG	2 cut(s)	312, 1435
BslFI	GGGAC	2 cut(s)	452, 1216
BslI	CCNNNNNNNGG	6 cut(s)	47, 311, 452, 1056, 1226, 1356
BsmAI	GTCTC	2 cut(s)	95, 681
BsmFI	GGGAC	2 cut(s)	452, 1216
BsnI	GGCC	9 cut(s)	118, 287, 311, 315, 351, 383, 398, 655, 700
Bso31I	GGTCTC	1 cut(s)	681
BsoBI	CYCGRG	1 cut(s)	684
Bsp119I	TTCGAA	1 cut(s)	1312
Bsp1286I	GDGCHC	4 cut(s)	297, 441, 685, 758
Bsp1407I	TGTACA	1 cut(s)	1244
Bsp143I	GATC	5 cut(s)	150, 522, 943, 1060, 1139
Bsp1720I	GCTNAGC	1 cut(s)	278
BspACI	CCGC	5 cut(s)	125, 316, 839, 1089, 1293
BspANI	GGCC	9 cut(s)	118, 287, 311, 315, 351, 383, 398, 655, 700
BspCNI	CTCAG	2 cut(s)	291, 1402
BspDI	ATCGAT	1 cut(s)	363
BspFNI	CGCG	1 cut(s)	261
BspLI	GGNNCC	1 cut(s)	382
BspMAI	CTGCAG	1 cut(s)	763
BspMI	ACCTGC	1 cut(s)	887
BspPI	GGATC	2 cut(s)	158, 1068
BspT104I	TTCGAA	1 cut(s)	1312
BspTNI	GGTCTC	1 cut(s)	681
BsrDI	GCAATG	4 cut(s)	219, 376, 723, 1247
BsrFI	RCCGGY	1 cut(s)	311
BsrGI	TGTACA	1 cut(s)	1244
BsrI	ACTGG	1 cut(s)	866
BssAI	RCCGGY	1 cut(s)	311
BssECI	CCNNGG	6 cut(s)	40, 47, 63, 134, 695, 1433
BssMI	GATC	5 cut(s)	150, 522, 943, 1060, 1139
BssSI	CACGAG	3 cut(s)	290, 630, 749
BssT1I	CCWWGG	1 cut(s)	63
Bst2BI	CACGAG	3 cut(s)	290, 630, 749
Bst2UI	CCWGG	3 cut(s)	42, 48, 1008
Bst4CI	ACNGT	5 cut(s)	109, 955, 970, 1185, 1371
BstAPI	GCANNNNNTGC	1 cut(s)	411
BstAUI	TGTACA	1 cut(s)	1244
BstBAI	YACGTR	1 cut(s)	929
BstBI	TTCGAA	1 cut(s)	1312
BstC8I	GCNNGC	6 cut(s)	120, 232, 313, 894, 919, 1093
BstDEI	CTNAG	3 cut(s)	278, 1051, 1389
BstF5I	GGATG	4 cut(s)	340, 847, 1429, 1443
BstFNI	CGCG	1 cut(s)	261
BstH2I	RGCGCY	1 cut(s)	278
BstHHI	GCGC	2 cut(s)	261, 277
BstKTI	GATC	5 cut(s)	153, 525, 946, 1063, 1142
BstMAI	GTCTC	2 cut(s)	95, 681
BstMBI	GATC	5 cut(s)	150, 522, 943, 1060, 1139
BstMCI	CGRYCG	1 cut(s)	316
BstMWI	GCNNNNNNNGC	6 cut(s)	28, 380, 389, 411, 923, 1390
BstNI	CCWGG	3 cut(s)	42, 48, 1008
BstNSI	RCATGY	1 cut(s)	259
BstPAI	GACNNNNGTC	1 cut(s)	1208
BstSCI	CCNGG	4 cut(s)	40, 46, 1006, 1433
BstSFI	CTRYAG	2 cut(s)	759, 834
BstSLI	GKGCMC	3 cut(s)	297, 441, 685
BstUI	CGCG	1 cut(s)	261
BstV1I	GCAGC	5 cut(s)	134, 417, 773, 811, 1180
BstV2I	GAAGAC	2 cut(s)	551, 1021
BstX2I	RGATCY	2 cut(s)	150, 1060
BstYI	RGATCY	2 cut(s)	150, 1060
BstZI	CGGCCG	1 cut(s)	313
Bsu15I	ATCGAT	1 cut(s)	363
BsuRI	GGCC	9 cut(s)	118, 287, 311, 315, 351, 383, 398, 655, 700
BsuTUI	ATCGAT	1 cut(s)	363
BtgZI	GCGATG	1 cut(s)	185
BtsCI	GGATG	4 cut(s)	340, 847, 1429, 1443
BtsI	GCAGTG	1 cut(s)	756
BtsIMutI	CAGTG	2 cut(s)	756, 1367
BveI	ACCTGC	1 cut(s)	887
Cac8I	GCNNGC	6 cut(s)	120, 232, 313, 894, 919, 1093
CaiI	CAGNNNCTG	1 cut(s)	1183
CfoI	GCGC	2 cut(s)	261, 277
Cfr10I	RCCGGY	1 cut(s)	311
Cfr13I	GGNCC	5 cut(s)	44, 286, 381, 568, 981
ClaI	ATCGAT	1 cut(s)	363
CseI	GACGC	1 cut(s)	1160
CsiI	ACCWGGT	1 cut(s)	1006
Csp6I	GTAC	1 cut(s)	1245
CviAII	CATG	8 cut(s)	94, 256, 615, 661, 829, 902, 1199, 1208
CviQI	GTAC	1 cut(s)	1245
DdeI	CTNAG	3 cut(s)	278, 1051, 1389
DpnI	GATC	5 cut(s)	152, 524, 945, 1062, 1141
DpnII	GATC	5 cut(s)	150, 522, 943, 1060, 1139
EaeI	YGGCCR	5 cut(s)	309, 313, 349, 396, 653
EagI	CGGCCG	1 cut(s)	313
EclXI	CGGCCG	1 cut(s)	313
Eco130I	CCWWGG	1 cut(s)	63
Eco31I	GGTCTC	1 cut(s)	681
Eco32I	GATATC	2 cut(s)	495, 1401
Eco47I	GGWCC	3 cut(s)	44, 568, 981
Eco52I	CGGCCG	1 cut(s)	313
Eco57I	CTGAAG	2 cut(s)	1015, 1148
Eco72I	CACGTG	1 cut(s)	929
Eco88I	CYCGRG	1 cut(s)	684
EcoO109I	RGGNCCY	2 cut(s)	286, 381
EcoRI	GAATTC	1 cut(s)	1308
EcoRII	CCWGG	3 cut(s)	40, 46, 1006
EcoRV	GATATC	2 cut(s)	495, 1401
EcoT14I	CCWWGG	1 cut(s)	63
ErhI	CCWWGG	1 cut(s)	63
FaeI	CATG	8 cut(s)	97, 259, 618, 664, 832, 905, 1202, 1211
FalI	AAGNNNNNCTT	2 cut(s)	1403, 1435
FaqI	GGGAC	2 cut(s)	452, 1216
FatI	CATG	8 cut(s)	93, 255, 614, 660, 828, 901, 1198, 1207
FauNDI	CATATG	1 cut(s)	1395
FbaI	TGATCA	1 cut(s)	943
FblI	GTMKAC	1 cut(s)	1282
Fnu4HI	GCNGC	8 cut(s)	123, 126, 316, 406, 762, 800, 1089, 1169
FokI	GGATG	3 cut(s)	347, 854, 1416
FseI	GGCCGGCC	1 cut(s)	315
Fsp4HI	GCNGC	8 cut(s)	123, 126, 316, 406, 762, 800, 1089, 1169
FspBI	CTAG	2 cut(s)	935, 1341
GlaI	GCGC	2 cut(s)	260, 276
GluI	GCNGC	8 cut(s)	123, 126, 316, 406, 762, 800, 1089, 1169
GsaI	CCCAGC	2 cut(s)	492, 1299
HaeII	RGCGCY	1 cut(s)	278
HaeIII	GGCC	9 cut(s)	118, 287, 311, 315, 351, 383, 398, 655, 700
HapII	CCGG	2 cut(s)	312, 1435
HgaI	GACGC	1 cut(s)	1160
HhaI	GCGC	2 cut(s)	261, 277
Hin1II	CATG	8 cut(s)	97, 259, 618, 664, 832, 905, 1202, 1211
Hin6I	GCGC	2 cut(s)	259, 275
HinP1I	GCGC	2 cut(s)	259, 275
HincII	GTYRAC	2 cut(s)	85, 825
HindII	GTYRAC	2 cut(s)	85, 825
HinfI	GANTC	4 cut(s)	68, 130, 588, 1204
HpaII	CCGG	2 cut(s)	312, 1435
HphI	GGTGA	2 cut(s)	440, 710
Hpy166II	GTNNAC	8 cut(s)	85, 568, 825, 876, 932, 1102, 1245, 1283
Hpy188I	TCNGA	4 cut(s)	522, 622, 741, 1034
Hpy188III	TCNNGA	6 cut(s)	446, 811, 947, 984, 1178, 1305
Hpy8I	GTNNAC	8 cut(s)	85, 568, 825, 876, 932, 1102, 1245, 1283
Hpy99I	CGWCG	1 cut(s)	741
HpyAV	CCTTC	5 cut(s)	262, 607, 972, 1313, 1318
HpyCH4III	ACNGT	5 cut(s)	109, 955, 970, 1185, 1371
HpyCH4IV	ACGT	3 cut(s)	87, 771, 928
HpyF10VI	GCNNNNNNNGC	6 cut(s)	28, 380, 389, 411, 923, 1390
HpyF3I	CTNAG	3 cut(s)	278, 1051, 1389
HpySE526I	ACGT	3 cut(s)	87, 771, 928
Hsp92II	CATG	8 cut(s)	97, 259, 618, 664, 832, 905, 1202, 1211
HspAI	GCGC	2 cut(s)	259, 275
KroI	GCCGGC	1 cut(s)	311
KroNI	GCCGGC	1 cut(s)	313
Ksp22I	TGATCA	1 cut(s)	943
Kzo9I	GATC	5 cut(s)	150, 522, 943, 1060, 1139
LmnI	GCTCC	2 cut(s)	14, 796
Lsp1109I	GCAGC	5 cut(s)	134, 417, 773, 811, 1180
LweI	GCATC	1 cut(s)	162
MabI	ACCWGGT	1 cut(s)	1006
MaeI	CTAG	2 cut(s)	935, 1341
MaeII	ACGT	3 cut(s)	87, 771, 928
MaeIII	GTNAC	3 cut(s)	772, 1010, 1365
MalI	GATC	5 cut(s)	152, 524, 945, 1062, 1141
MboI	GATC	5 cut(s)	150, 522, 943, 1060, 1139
MboII	GAAGA	5 cut(s)	85, 489, 551, 1021, 1127
MfeI	CAATTG	1 cut(s)	1146
MflI	RGATCY	2 cut(s)	150, 1060
MhlI	GDGCHC	4 cut(s)	297, 441, 685, 758
MluCI	AATT	8 cut(s)	244, 449, 648, 778, 1146, 1267, 1287, 1308
MlyI	GAGTC	2 cut(s)	124, 1198
MmeI	TCCRAC	1 cut(s)	719
MroNI	GCCGGC	1 cut(s)	311
MseI	TTAA	2 cut(s)	35, 1425
MslI	CAYNNNNRTG	1 cut(s)	260
MspA1I	CMGCKG	3 cut(s)	125, 488, 1295
MspI	CCGG	2 cut(s)	312, 1435
MspR9I	CCNGG	4 cut(s)	42, 48, 1008, 1435
MunI	CAATTG	1 cut(s)	1146
MvaI	CCWGG	3 cut(s)	42, 48, 1008
MvnI	CGCG	1 cut(s)	261
MwoI	GCNNNNNNNGC	6 cut(s)	28, 380, 389, 411, 923, 1390
NaeI	GCCGGC	1 cut(s)	313
NciI	CCSGG	1 cut(s)	1435
NdeI	CATATG	1 cut(s)	1395
NdeII	GATC	5 cut(s)	150, 522, 943, 1060, 1139
NgoMIV	GCCGGC	1 cut(s)	311
NlaIII	CATG	8 cut(s)	97, 259, 618, 664, 832, 905, 1202, 1211
NlaIV	GGNNCC	1 cut(s)	382
NmeAIII	GCCGAG	2 cut(s)	115, 676
NmuCI	GTSAC	1 cut(s)	1365
NspI	RCATGY	1 cut(s)	259
NspV	TTCGAA	1 cut(s)	1312
PdiI	GCCGGC	1 cut(s)	313
PfeI	GAWTC	2 cut(s)	68, 588
PkrI	GCNGC	8 cut(s)	124, 127, 317, 407, 763, 801, 1090, 1170
PleI	GAGTC	2 cut(s)	124, 1198
PmaCI	CACGTG	1 cut(s)	929
PmlI	CACGTG	1 cut(s)	929
PpsI	GAGTC	2 cut(s)	124, 1198
Ppu21I	YACGTR	1 cut(s)	929
PshAI	GACNNNNGTC	1 cut(s)	1208
Psp1406I	AACGTT	2 cut(s)	87, 771
Psp6I	CCWGG	3 cut(s)	40, 46, 1006
PspCI	CACGTG	1 cut(s)	929
PspFI	CCCAGC	2 cut(s)	488, 1295
PspGI	CCWGG	3 cut(s)	40, 46, 1006
PspN4I	GGNNCC	1 cut(s)	382
PspPI	GGNCC	5 cut(s)	44, 286, 381, 568, 981
PstI	CTGCAG	1 cut(s)	763
PstNI	CAGNNNCTG	1 cut(s)	1183
PsuI	RGATCY	2 cut(s)	150, 1060
PvuII	CAGCTG	1 cut(s)	488
RigI	GGCCGGCC	1 cut(s)	315
RsaI	GTAC	1 cut(s)	1246
RsaNI	GTAC	1 cut(s)	1245
RseI	CAYNNNNRTG	1 cut(s)	260
SaqAI	TTAA	2 cut(s)	35, 1425
SatI	GCNGC	8 cut(s)	123, 126, 316, 406, 762, 800, 1089, 1169
Sau3AI	GATC	5 cut(s)	150, 522, 943, 1060, 1139
Sau96I	GGNCC	5 cut(s)	44, 286, 381, 568, 981
SchI	GAGTC	2 cut(s)	124, 1198
ScrFI	CCNGG	4 cut(s)	42, 48, 1008, 1435
SduI	GDGCHC	4 cut(s)	297, 441, 685, 758
SexAI	ACCWGGT	1 cut(s)	1006
SfaNI	GCATC	1 cut(s)	162
SfcI	CTRYAG	2 cut(s)	759, 834
SfuI	TTCGAA	1 cut(s)	1312
SinI	GGWCC	3 cut(s)	44, 568, 981
SmiMI	CAYNNNNRTG	1 cut(s)	260
Sse9I	AATT	8 cut(s)	244, 449, 648, 778, 1146, 1267, 1287, 1308
SsiI	CCGC	5 cut(s)	125, 316, 839, 1089, 1293
SspMI	CTAG	2 cut(s)	935, 1341
StyD4I	CCNGG	4 cut(s)	40, 46, 1006, 1433
StyI	CCWWGG	1 cut(s)	63
TaaI	ACNGT	5 cut(s)	109, 955, 970, 1185, 1371
TaiI	ACGT	3 cut(s)	90, 774, 931
TaqI	TCGA	9 cut(s)	71, 357, 363, 562, 574, 639, 1070, 1138, 1312
TasI	AATT	8 cut(s)	244, 449, 648, 778, 1146, 1267, 1287, 1308
TatI	WGTACW	1 cut(s)	1244
TauI	GCSGC	3 cut(s)	128, 318, 1091
TfiI	GAWTC	2 cut(s)	68, 588
Tru1I	TTAA	2 cut(s)	35, 1425
Tru9I	TTAA	2 cut(s)	35, 1425
TscAI	CASTG	2 cut(s)	763, 1374
TseFI	GTSAC	1 cut(s)	1365
TseI	GCWGC	5 cut(s)	122, 405, 761, 799, 1168
Tsp45I	GTSAC	1 cut(s)	1365
TspDTI	ATGAA	2 cut(s)	869, 1275
TspGWI	ACGGA	1 cut(s)	251
TspRI	CASTG	2 cut(s)	763, 1374
VpaK11BI	GGWCC	3 cut(s)	44, 568, 981
XapI	RAATTY	3 cut(s)	449, 778, 1308
XceI	RCATGY	1 cut(s)	259
XmiI	GTMKAC	1 cut(s)	1282
XspI	CTAG	2 cut(s)	935, 1341

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.