Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Reverse (-)

17742039 .. 17743376

Gene Structure 1338 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00014380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1338 bp

ATGGTGAAGCCAGCAGTGGAGACGCCTCGCCGGTCGCTGTGGATCTCAAACTTGGACATGGTGAGTTCGAATGCTCACACTCCCACTGTTTATTTCTACAGGCCCGAAAACGGCGGTGCAGTTGACAATGGCAACTTCTTTGACCCCATCGTGCTGAAGGAAGCACTCAGCAAGGCCCTAGTGCCCTTTTACCCGTTGGCTGGTCGCCTGCAGCGAAACAACGAGGACAAGAATGGTCGTGTCGAAATTGATTGCAATGCAGATGGCGTGTTGTTTGTTTTGGCCGACAGCAGCTATTGCATGGATGACTTTGGTGATTTTCTGCCCACTCCCGAGTTTGGGAGCATGCTCATCCCTGACGTTGATTATTCGGCGGGGATATCTTCTTATGCCCTCCTTGTAGTTCAGATCACGTACTTGAAATGCGGTGGAGTGGTACTTGGTATTGGCTTTGAACATAGCGTAGCAGATGGATTTTCTGCTCTTCACTTTATAAATGCATGGTCTGATATGGCTCGTGGTCTCGACCTTGCAATTCCACCAAACCTTGACAGGACATTACTTCGTGCACGAGAACCACCTCAGCCTTTACTTCACCACAATCACCATGTCGAATACCAACCTGCTCCACCGCCCACCACAGAAGCCACTGCTGGTGCTGATCCCGACTATGAGACCGCCACGGCAACGACAGTCTCCATTTTTAAGTTCACAAAGGAGCATATCAACATCTTGAAAGCTAAGTCATCAAATGATGATGGGAATTCATCAATTAAGTACACTTCATATGAGGTATTTGCAGCTCATGTCTGGAGATGTGCATGCAAGGCACGTGAACTTGCTGATGATCAAGAGACACAATTCCACATTGCCGCAAACGGAAGGTCGAGATTGCAGCCCCCAATTCCACCTGGTTACTTTGGTAATGTGATTTTCTGCGGCGCATCAACTGCATTAGCAGGGGATATCATATCGAAACCAATAGGGTATGCAGCGAGCTGTATTCACAATACTTTGGTACGTATGGACGATGATTATCTTCGATCAGCTCTCGACTATCTTGAGCTTCAGCAATCTCATCGTCATCTGTCAGACTTCGCTAGCGGGGCTCATTATTGGAAGTGCCCTAATCTTGGGATAACTAGTTGGGTCACGCTGCCGATCTACGATGCTGATTTTAGATGGGGTCGACCCATTTTCGTGGGCCGTGGTAAAATTTTACATGAAGGGAAGGCTTACACAATACCAAAGGCAAGTAACGATGGGAGTTTTTCTCTGGCCATTGCTCTGCAATATCAACATATGAAGTCATTTTCCAAGTTGATTTATGAAATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

445

Amino Acids

49.22

Weight (kDa)

5.79

Isoelectric Point (pI)

35.16

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	1 - 441	2.7e-98	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	494
Acc36I	ACCTGC	1 cut(s)	631
AccI	GTMKAC	1 cut(s)	1189
AciI	CCGC	8 cut(s)	114, 374, 426, 632, 678, 873, 939, 1104
AclWI	GGATC	2 cut(s)	50, 656
AcoI	YGGCCR	2 cut(s)	282, 1278
AcsI	RAATTY	2 cut(s)	763, 1215
AcuI	CTGAAG	2 cut(s)	176, 1052
AcvI	CACGTG	1 cut(s)	833
AcyI	GRCGYC	1 cut(s)	23
AfaI	GTAC	4 cut(s)	416, 438, 779, 1020
AfiI	CCNNNNNNNGG	5 cut(s)	110, 200, 338, 339, 1133
AgsI	TTSAA	3 cut(s)	421, 455, 736
AhlI	ACTAGT	1 cut(s)	1142
AjnI	CCWGG	1 cut(s)	910
AluBI	AGCT	6 cut(s)	294, 740, 803, 999, 1049, 1066
AluI	AGCT	6 cut(s)	294, 740, 803, 999, 1049, 1066
Alw21I	GWGCWC	1 cut(s)	571
Alw26I	GTCTC	5 cut(s)	14, 527, 668, 700, 848
Alw44I	GTGCAC	1 cut(s)	567
AlwI	GGATC	2 cut(s)	50, 656
Ama87I	CYCGRG	1 cut(s)	332
AoxI	GGCC	5 cut(s)	101, 174, 282, 1204, 1278
ApaLI	GTGCAC	1 cut(s)	567
ApeKI	GCWGC	6 cut(s)	211, 291, 800, 895, 992, 1156
ApoI	RAATTY	2 cut(s)	763, 1215
ArsI	GACNNNNNNTTYG	2 cut(s)	869, 901
AspLEI	GCGC	1 cut(s)	944
AspS9I	GGNCC	3 cut(s)	102, 175, 1204
AsuHPI	GGTGA	5 cut(s)	16, 73, 326, 587, 596
AsuII	TTCGAA	1 cut(s)	68
AsuNHI	GCTAGC	1 cut(s)	1100
AvaI	CYCGRG	1 cut(s)	332
BaeGI	GKGCMC	3 cut(s)	186, 571, 1127
BalI	TGGCCA	1 cut(s)	1280
BanII	GRGCYC	1 cut(s)	1111
BauI	CACGAG	2 cut(s)	516, 570
BbrPI	CACGTG	1 cut(s)	833
Bbv12I	GWGCWC	1 cut(s)	571
BbvCI	CCTCAGC	1 cut(s)	582
BbvI	GCAGC	6 cut(s)	223, 303, 812, 907, 1004, 1143
BccI	CCATC	6 cut(s)	155, 257, 464, 752, 1176, 1256
BceAI	ACGGC	3 cut(s)	127, 699, 1191
BcgI	CGANNNNNNTGC	2 cut(s)	1061, 1095
BciT130I	CCWGG	1 cut(s)	912
BclI	TGATCA	1 cut(s)	847
BcoDI	GTCTC	5 cut(s)	14, 527, 668, 700, 848
BcuI	ACTAGT	1 cut(s)	1142
BfaI	CTAG	3 cut(s)	179, 1101, 1143
BfmI	CTRYAG	2 cut(s)	97, 209
BfuAI	ACCTGC	1 cut(s)	631
BisI	GCNGC	8 cut(s)	212, 292, 801, 873, 896, 940, 993, 1157
BlsI	GCNGC	8 cut(s)	213, 293, 802, 874, 897, 941, 994, 1158
Bme1390I	CCNGG	1 cut(s)	912
BmeT110I	CYCGRG	1 cut(s)	332
BmgT120I	GGNCC	3 cut(s)	102, 175, 1204
BmrFI	CCNGG	1 cut(s)	912
BmsI	GCATC	2 cut(s)	953, 1159
BmtI	GCTAGC	1 cut(s)	1104
BplI	GAGNNNNNCTC	2 cut(s)	1258, 1290
BpmI	CTGGAG	1 cut(s)	832
Bpu10I	CCTNAGC	1 cut(s)	582
Bpu14I	TTCGAA	1 cut(s)	68
BpuEI	CTTGAG	1 cut(s)	1082
BsaAI	YACGTR	3 cut(s)	414, 833, 1022
BsaBI	GATNNNNATC	1 cut(s)	1035
BsaHI	GRCGYC	1 cut(s)	23
BsaI	GGTCTC	2 cut(s)	527, 668
BsaJI	CCNNGG	2 cut(s)	681, 1207
Bsc4I	CCNNNNNNNGG	5 cut(s)	110, 200, 338, 339, 1133
Bse118I	RCCGGY	1 cut(s)	30
Bse3DI	GCAATG	3 cut(s)	262, 867, 1281
Bse8I	GATNNNNATC	1 cut(s)	1035
BseBI	CCWGG	1 cut(s)	912
BseDI	CCNNGG	2 cut(s)	681, 1207
BseGI	GGATG	2 cut(s)	310, 351
BseJI	GATNNNNATC	1 cut(s)	1035
BseLI	CCNNNNNNNGG	5 cut(s)	110, 200, 338, 339, 1133
BseMI	GCAATG	3 cut(s)	262, 867, 1281
BseMII	CTCAG	2 cut(s)	181, 596
BseSI	GKGCMC	3 cut(s)	186, 571, 1127
BseXI	GCAGC	6 cut(s)	223, 303, 812, 907, 1004, 1143
BsgI	GTGCAG	1 cut(s)	138
Bsh1285I	CGRYCG	1 cut(s)	35
BshFI	GGCC	5 cut(s)	103, 176, 284, 1206, 1280
BsiEI	CGRYCG	1 cut(s)	35
BsiHKAI	GWGCWC	1 cut(s)	571
BsiHKCI	CYCGRG	1 cut(s)	332
BsiSI	CCGG	1 cut(s)	31
BslI	CCNNNNNNNGG	5 cut(s)	110, 200, 338, 339, 1133
BsmAI	GTCTC	5 cut(s)	14, 527, 668, 700, 848
BsmBI	CGTCTC	1 cut(s)	14
BsmI	GAATGC	1 cut(s)	76
BsnI	GGCC	5 cut(s)	103, 176, 284, 1206, 1280
Bso31I	GGTCTC	2 cut(s)	527, 668
BsoBI	CYCGRG	1 cut(s)	332
Bsp119I	TTCGAA	1 cut(s)	68
Bsp1286I	GDGCHC	4 cut(s)	186, 571, 1111, 1127
Bsp143I	GATC	6 cut(s)	42, 408, 661, 847, 1043, 1161
BspACI	CCGC	8 cut(s)	114, 374, 426, 632, 678, 873, 939, 1104
BspANI	GGCC	5 cut(s)	103, 176, 284, 1206, 1280
BspCNI	CTCAG	2 cut(s)	180, 595
BspMAI	CTGCAG	1 cut(s)	213
BspMI	ACCTGC	1 cut(s)	631
BspOI	GCTAGC	1 cut(s)	1104
BspPI	GGATC	2 cut(s)	50, 656
BspQI	GCTCTTC	1 cut(s)	489
BspT104I	TTCGAA	1 cut(s)	68
BspTNI	GGTCTC	2 cut(s)	527, 668
BsrDI	GCAATG	3 cut(s)	262, 867, 1281
BsrFI	RCCGGY	1 cut(s)	30
BssAI	RCCGGY	1 cut(s)	30
BssECI	CCNNGG	2 cut(s)	681, 1207
BssMI	GATC	6 cut(s)	42, 408, 661, 847, 1043, 1161
BssNI	GRCGYC	1 cut(s)	23
BssSI	CACGAG	2 cut(s)	516, 570
Bst2BI	CACGAG	2 cut(s)	516, 570
Bst2UI	CCWGG	1 cut(s)	912
Bst4CI	ACNGT	2 cut(s)	88, 694
Bst6I	CTCTTC	1 cut(s)	489
BstACI	GRCGYC	1 cut(s)	23
BstAPI	GCANNNNNTGC	2 cut(s)	297, 950
BstBAI	YACGTR	3 cut(s)	414, 833, 1022
BstBI	TTCGAA	1 cut(s)	68
BstC8I	GCNNGC	6 cut(s)	12, 209, 347, 823, 997, 1102
BstDEI	CTNAG	3 cut(s)	167, 582, 741
BstDSI	CCRYGG	2 cut(s)	681, 1207
BstF5I	GGATG	2 cut(s)	310, 351
BstHHI	GCGC	1 cut(s)	944
BstKTI	GATC	6 cut(s)	45, 411, 664, 850, 1046, 1164
BstMAI	GTCTC	5 cut(s)	14, 527, 668, 700, 848
BstMBI	GATC	6 cut(s)	42, 408, 661, 847, 1043, 1161
BstMCI	CGRYCG	1 cut(s)	35
BstMWI	GCNNNNNNNGC	4 cut(s)	297, 827, 950, 1106
BstNI	CCWGG	1 cut(s)	912
BstNSI	RCATGY	2 cut(s)	349, 825
BstSCI	CCNGG	1 cut(s)	910
BstSFI	CTRYAG	2 cut(s)	97, 209
BstSLI	GKGCMC	3 cut(s)	186, 571, 1127
BstSNI	TACGTA	1 cut(s)	1022
BstV1I	GCAGC	6 cut(s)	223, 303, 812, 907, 1004, 1143
BstX2I	RGATCY	1 cut(s)	42
BstXI	CCANNNNNNTGG	1 cut(s)	1201
BstYI	RGATCY	1 cut(s)	42
BsuRI	GGCC	5 cut(s)	103, 176, 284, 1206, 1280
BtgI	CCRYGG	2 cut(s)	681, 1207
BtsCI	GGATG	2 cut(s)	310, 351
BtsI	GCAGTG	2 cut(s)	21, 648
BtsIMutI	CAGTG	3 cut(s)	21, 84, 648
BveI	ACCTGC	1 cut(s)	631
Cac8I	GCNNGC	6 cut(s)	12, 209, 347, 823, 997, 1102
CfoI	GCGC	1 cut(s)	944
Cfr10I	RCCGGY	1 cut(s)	30
Cfr13I	GGNCC	3 cut(s)	102, 175, 1204
CseI	GACGC	1 cut(s)	31
CsiI	ACCWGGT	1 cut(s)	910
Csp6I	GTAC	4 cut(s)	415, 437, 778, 1019
CviAII	CATG	8 cut(s)	58, 301, 346, 501, 608, 806, 822, 1223
CviQI	GTAC	4 cut(s)	415, 437, 778, 1019
DdeI	CTNAG	3 cut(s)	167, 582, 741
DpnI	GATC	6 cut(s)	44, 410, 663, 849, 1045, 1163
DpnII	GATC	6 cut(s)	42, 408, 661, 847, 1043, 1161
EaeI	YGGCCR	2 cut(s)	282, 1278
Eam1104I	CTCTTC	1 cut(s)	489
EarI	CTCTTC	1 cut(s)	489
Eco105I	TACGTA	1 cut(s)	1022
Eco24I	GRGCYC	1 cut(s)	1111
Eco31I	GGTCTC	2 cut(s)	527, 668
Eco32I	GATATC	2 cut(s)	381, 967
Eco57I	CTGAAG	2 cut(s)	176, 1052
Eco72I	CACGTG	1 cut(s)	833
Eco88I	CYCGRG	1 cut(s)	332
EcoO109I	RGGNCCY	1 cut(s)	175
EcoRI	GAATTC	1 cut(s)	763
EcoRII	CCWGG	1 cut(s)	910
EcoRV	GATATC	2 cut(s)	381, 967
EcoT22I	ATGCAT	1 cut(s)	502
EcoT38I	GRGCYC	1 cut(s)	1111
Esp3I	CGTCTC	1 cut(s)	14
FaeI	CATG	8 cut(s)	61, 304, 349, 504, 611, 809, 825, 1226
FatI	CATG	8 cut(s)	57, 300, 345, 500, 607, 805, 821, 1222
FauI	CCCGC	2 cut(s)	367, 1097
FauNDI	CATATG	2 cut(s)	787, 1302
FbaI	TGATCA	1 cut(s)	847
FblI	GTMKAC	1 cut(s)	1189
Fnu4HI	GCNGC	8 cut(s)	212, 292, 801, 873, 896, 940, 993, 1157
FokI	GGATG	2 cut(s)	317, 338
FriOI	GRGCYC	1 cut(s)	1111
Fsp4HI	GCNGC	8 cut(s)	212, 292, 801, 873, 896, 940, 993, 1157
FspBI	CTAG	3 cut(s)	179, 1101, 1143
GlaI	GCGC	1 cut(s)	943
GluI	GCNGC	8 cut(s)	212, 292, 801, 873, 896, 940, 993, 1157
GsuI	CTGGAG	1 cut(s)	832
HaeIII	GGCC	5 cut(s)	103, 176, 284, 1206, 1280
HapII	CCGG	1 cut(s)	31
HgaI	GACGC	1 cut(s)	31
HhaI	GCGC	1 cut(s)	944
Hin1I	GRCGYC	1 cut(s)	23
Hin1II	CATG	8 cut(s)	61, 304, 349, 504, 611, 809, 825, 1226
Hin6I	GCGC	1 cut(s)	942
HinP1I	GCGC	1 cut(s)	942
HincII	GTYRAC	2 cut(s)	124, 1190
HindII	GTYRAC	2 cut(s)	124, 1190
HpaII	CCGG	1 cut(s)	31
HphI	GGTGA	5 cut(s)	16, 73, 326, 587, 596
Hpy166II	GTNNAC	6 cut(s)	124, 569, 711, 780, 836, 1190
Hpy188I	TCNGA	3 cut(s)	408, 508, 1093
Hpy188III	TCNNGA	9 cut(s)	332, 524, 665, 733, 811, 851, 888, 1052, 1061
Hpy8I	GTNNAC	6 cut(s)	124, 569, 711, 780, 836, 1190
HpyAV	CCTTC	4 cut(s)	151, 876, 1220, 1225
HpyCH4III	ACNGT	2 cut(s)	88, 694
HpyCH4IV	ACGT	4 cut(s)	360, 413, 832, 1021
HpyF10VI	GCNNNNNNNGC	4 cut(s)	297, 827, 950, 1106
HpyF3I	CTNAG	3 cut(s)	167, 582, 741
HpySE526I	ACGT	4 cut(s)	360, 413, 832, 1021
Hsp92I	GRCGYC	1 cut(s)	23
Hsp92II	CATG	8 cut(s)	61, 304, 349, 504, 611, 809, 825, 1226
HspAI	GCGC	1 cut(s)	942
Ksp22I	TGATCA	1 cut(s)	847
Kzo9I	GATC	6 cut(s)	42, 408, 661, 847, 1043, 1161
LguI	GCTCTTC	1 cut(s)	489
LmnI	GCTCC	3 cut(s)	342, 631, 718
Lsp1109I	GCAGC	6 cut(s)	223, 303, 812, 907, 1004, 1143
LweI	GCATC	2 cut(s)	953, 1159
MabI	ACCWGGT	1 cut(s)	910
MaeI	CTAG	3 cut(s)	179, 1101, 1143
MaeII	ACGT	4 cut(s)	360, 413, 832, 1021
MaeIII	GTNAC	3 cut(s)	914, 1150, 1256
MalI	GATC	6 cut(s)	44, 410, 663, 849, 1045, 1163
MboI	GATC	6 cut(s)	42, 408, 661, 847, 1043, 1161
MboII	GAAGA	3 cut(s)	375, 476, 1031
MflI	RGATCY	1 cut(s)	42
MhlI	GDGCHC	4 cut(s)	186, 571, 1111, 1127
MlsI	TGGCCA	1 cut(s)	1280
MluCI	AATT	7 cut(s)	246, 534, 763, 771, 860, 903, 1215
MluNI	TGGCCA	1 cut(s)	1280
MnlI	CCTC	5 cut(s)	36, 217, 404, 591, 784
Mox20I	TGGCCA	1 cut(s)	1280
Mph1103I	ATGCAT	1 cut(s)	502
MscI	TGGCCA	1 cut(s)	1280
MseI	TTAA	2 cut(s)	705, 774
MslI	CAYNNNNRTG	1 cut(s)	1199
Msp20I	TGGCCA	1 cut(s)	1280
MspI	CCGG	1 cut(s)	31
MspR9I	CCNGG	1 cut(s)	912
Mva1269I	GAATGC	1 cut(s)	76
MvaI	CCWGG	1 cut(s)	912
MwoI	GCNNNNNNNGC	4 cut(s)	297, 827, 950, 1106
NdeI	CATATG	2 cut(s)	787, 1302
NdeII	GATC	6 cut(s)	42, 408, 661, 847, 1043, 1161
NheI	GCTAGC	1 cut(s)	1100
NlaIII	CATG	8 cut(s)	61, 304, 349, 504, 611, 809, 825, 1226
NmuCI	GTSAC	1 cut(s)	1150
NsiI	ATGCAT	1 cut(s)	502
NspI	RCATGY	2 cut(s)	349, 825
NspV	TTCGAA	1 cut(s)	68
PaeI	GCATGC	2 cut(s)	349, 825
PciSI	GCTCTTC	1 cut(s)	489
PcsI	WCGNNNNNNNCGW	1 cut(s)	211
PctI	GAATGC	1 cut(s)	76
PkrI	GCNGC	8 cut(s)	213, 293, 802, 874, 897, 941, 994, 1158
PmaCI	CACGTG	1 cut(s)	833
PmlI	CACGTG	1 cut(s)	833
Ppu21I	YACGTR	3 cut(s)	414, 833, 1022
PsiI	TTATAA	1 cut(s)	494
Psp6I	CCWGG	1 cut(s)	910
PspCI	CACGTG	1 cut(s)	833
PspGI	CCWGG	1 cut(s)	910
PspPI	GGNCC	3 cut(s)	102, 175, 1204
PstI	CTGCAG	1 cut(s)	213
PsuI	RGATCY	1 cut(s)	42
RsaI	GTAC	4 cut(s)	416, 438, 779, 1020
RsaNI	GTAC	4 cut(s)	415, 437, 778, 1019
RseI	CAYNNNNRTG	1 cut(s)	1199
SalI	GTCGAC	1 cut(s)	1188
SapI	GCTCTTC	1 cut(s)	489
SaqAI	TTAA	2 cut(s)	705, 774
SatI	GCNGC	8 cut(s)	212, 292, 801, 873, 896, 940, 993, 1157
Sau3AI	GATC	6 cut(s)	42, 408, 661, 847, 1043, 1161
Sau96I	GGNCC	3 cut(s)	102, 175, 1204
ScrFI	CCNGG	1 cut(s)	912
SduI	GDGCHC	4 cut(s)	186, 571, 1111, 1127
SexAI	ACCWGGT	1 cut(s)	910
SfaNI	GCATC	2 cut(s)	953, 1159
SfcI	CTRYAG	2 cut(s)	97, 209
SfuI	TTCGAA	1 cut(s)	68
SmiMI	CAYNNNNRTG	1 cut(s)	1199
SmlI	CTYRAG	1 cut(s)	1061
SmoI	CTYRAG	1 cut(s)	1061
SnaBI	TACGTA	1 cut(s)	1022
SpeI	ACTAGT	1 cut(s)	1142
SphI	GCATGC	2 cut(s)	349, 825
Sse9I	AATT	7 cut(s)	246, 534, 763, 771, 860, 903, 1215
SsiI	CCGC	8 cut(s)	114, 374, 426, 632, 678, 873, 939, 1104
SspMI	CTAG	3 cut(s)	179, 1101, 1143
StyD4I	CCNGG	1 cut(s)	910
TaaI	ACNGT	2 cut(s)	88, 694
TaiI	ACGT	4 cut(s)	363, 416, 835, 1024
TaqI	TCGA	9 cut(s)	68, 243, 525, 612, 887, 974, 1042, 1053, 1189
TasI	AATT	7 cut(s)	246, 534, 763, 771, 860, 903, 1215
TatI	WGTACW	1 cut(s)	777
TauI	GCSGC	2 cut(s)	875, 942
Tru1I	TTAA	2 cut(s)	705, 774
Tru9I	TTAA	2 cut(s)	705, 774
TscAI	CASTG	3 cut(s)	21, 91, 655
TseFI	GTSAC	1 cut(s)	1150
TseI	GCWGC	6 cut(s)	211, 291, 800, 895, 992, 1156
Tsp45I	GTSAC	1 cut(s)	1150
TspDTI	ATGAA	4 cut(s)	756, 774, 1239, 1319
TspGWI	ACGGA	1 cut(s)	894
TspRI	CASTG	3 cut(s)	21, 91, 655
VneI	GTGCAC	1 cut(s)	567
XapI	RAATTY	2 cut(s)	763, 1215
XceI	RCATGY	2 cut(s)	349, 825
XmiI	GTMKAC	1 cut(s)	1189
XspI	CTAG	3 cut(s)	179, 1101, 1143
Zsp2I	ATGCAT	1 cut(s)	502

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.