RchiOBHm_Chr5g0066541

Shikimate O-hydroxycinnamoyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000233
Physical Location & Seq
Forward (+)
72693870 .. 72695508
1639 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ34230

Sequence Viewer

Length: 1368 bp
ATGGCAGTCAACGTTAGCATGCGAGAGACAACAGTGGTGAGGCCAGCAGCGGAGACTCCTGGGCTGTCACTTTGGATCTCAAACTTAGACATGGTGAAGACCAACACTCACACTCCTCTTGTTTATTTCTACAAGCCAAAAAACATAGCTGGTGCAGGCGAGGACAACAATTTCTTTGACATGCACGTGCTGAAGGACGCGCTCAGCAAGGCCCTTGTGCCCTTTTACCCGTTCGCCGGTCGCCTACGGCAGAAAAAGGACGAAGGAGAGAATGGCCGTATCGAAATCGATTGCAATGCAGAGGGAGCCTTGTTTGCTGTGGCCGATAGCAGCTCTTGCATTAGTGATTTTGGTGATTTTGCACCCACTCCCGAATTCGGGAGAGGGCTCATCCCCATAGTTGATTATTCAGCTGGGATATCTTCTTTTCCCTTGTTGCTGGTTCAGATCACATACTTGAAATGTGGTGGAGTGGCACTTGGTCTTCGCGTGGACCCTCGTGTATCGGATGGATTATCTACTTTCCACTTCATAAATACATGGTCTGATATGGCTTGTGGTCTCGAGGTTGCAATTCGGCCAAGCATGGACCGGACGATACTTCTTGCCCGAGACCCACCTCGGCCTTTACCCGACCACATTCACCACATTGCATACCCTCCTCGAAATAAGCATGAGCGCACTTCAGCAACAACGGTTACAAAATTTAGATTTACAAGGGAGCAGCTCAATGTCTTGAAAGCTATGTCAACCATGACTATAGCGGATGGGGATGATATGAACACTTTACCTGTCAAGTTTACCTCATTTGAGGTGTTTGCAGGTCATGTATGGAGATGTGCCTGCAAGGCACGTGAACTAGCTAATGATCAAGAAACTATATTATACCTTTTTGTAAATGGAAGGTCCAGATTACAACCCCCTCTGCCACCTGGTTACTTCGGCAATGTGGTTTTCAGAGCCACAGCAACAGCCTTAGCAGGGGATCTCATATCGAAACCAATATGGTATGCTGCACGCTGTATTCACAATGCTTTGGTGCGTATGGACGATGATTATCTTCGATCAGCAATCGACTACCTGGAACTTCAGCAGCGTCATCAGGAACTGTCAAGCCTTGCTCATGGGACTCATTATAGGTGTCCTAATCTTGAGATAAATAGCTGGTGTAAATTGCCCATCTATGATGCTGATTTTGGGTGGGGTAGACCAATTTCCGTTGGGCGTTCTGAAATTCCAAGTGTAGGGAAGGGCTACATGGTACCTAGTGCAACTGATGATGGGAGTTTGTCACTATCCATTAGTCTGCAATCTCAGCATATGATATCATTTTCCAAGAACGTCTTACTTAACCACCCTCGGATGTAA

Protein Analysis

455

Amino Acids

50.61

Weight (kDa)

6.92

Isoelectric Point (pI)

43.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transferase PF02458 4 - 447 5.4e-99 Transferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000233)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G48930
fragaria_vesca FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 812
Acc65I GGTACC 1 cut(s) 1261
AccB1I GGYRCC 1 cut(s) 1261
AccI GTMKAC 1 cut(s) 1207
AccII CGCG 2 cut(s) 200, 489
AciI CCGC 2 cut(s) 50, 764
AclI AACGTT 1 cut(s) 12
AclWI GGATC 2 cut(s) 83, 993
AcoI YGGCCR 3 cut(s) 274, 321, 578
AcsI RAATTY 3 cut(s) 374, 704, 1233
AcuI CTGAAG 3 cut(s) 212, 669, 1073
AcvI CACGTG 2 cut(s) 187, 854
AfaI GTAC 1 cut(s) 1263
AfiI CCNNNNNNNGG 5 cut(s) 236, 377, 378, 981, 1244
AgsI TTSAA 2 cut(s) 460, 739
AjnI CCWGG 3 cut(s) 58, 931, 1080
AluBI AGCT 7 cut(s) 149, 333, 413, 727, 743, 863, 1164
AluI AGCT 7 cut(s) 149, 333, 413, 727, 743, 863, 1164
Alw26I GTCTC 4 cut(s) 20, 47, 566, 606
AlwI GGATC 2 cut(s) 83, 993
AlwNI CAGNNNCTG 1 cut(s) 1108
Ama87I CYCGRG 2 cut(s) 563, 609
AoxI GGCC 6 cut(s) 41, 210, 274, 321, 578, 623
ApeKI GCWGC 5 cut(s) 47, 330, 724, 1013, 1093
ApoI RAATTY 3 cut(s) 374, 704, 1233
Asp718I GGTACC 1 cut(s) 1261
AspLEI GCGC 2 cut(s) 202, 681
AspS9I GGNCC 4 cut(s) 211, 493, 589, 906
AsuHPI GGTGA 4 cut(s) 49, 106, 365, 635
AvaI CYCGRG 2 cut(s) 563, 609
AvaII GGWCC 3 cut(s) 493, 589, 906
BaeGI GKGCMC 1 cut(s) 222
BanI GGYRCC 1 cut(s) 1261
BanII GRGCYC 1 cut(s) 390
BauI CACGAG 1 cut(s) 498
BbrPI CACGTG 2 cut(s) 187, 854
BbsI GAAGAC 2 cut(s) 104, 476
BbvI GCAGC 5 cut(s) 59, 342, 736, 1000, 1105
BccI CCATC 4 cut(s) 503, 761, 1187, 1274
BceAI ACGGC 2 cut(s) 261, 263
BcgI CGANNNNNNTGC 2 cut(s) 278, 312
BciT130I CCWGG 3 cut(s) 60, 933, 1082
BclI TGATCA 1 cut(s) 868
BcoDI GTCTC 4 cut(s) 20, 47, 566, 606
BfaI CTAG 2 cut(s) 860, 1266
BfmI CTRYAG 1 cut(s) 759
BfuAI ACCTGC 1 cut(s) 812
BglI GCCNNNNNGGC 1 cut(s) 848
BisI GCNGC 5 cut(s) 48, 331, 725, 1014, 1094
BlpI GCTNAGC 1 cut(s) 203
BlsI GCNGC 5 cut(s) 49, 332, 726, 1015, 1095
Bme1390I CCNGG 3 cut(s) 60, 933, 1082
Bme18I GGWCC 3 cut(s) 493, 589, 906
BmeT110I CYCGRG 2 cut(s) 563, 609
BmgT120I GGNCC 4 cut(s) 211, 493, 589, 906
BmiI GGNNCC 3 cut(s) 307, 495, 1263
BmrFI CCNGG 3 cut(s) 60, 933, 1082
BmsI GCATC 1 cut(s) 1177
BpiI GAAGAC 2 cut(s) 104, 476
Bpu10I CCTNAGC 1 cut(s) 976
Bpu1102I GCTNAGC 1 cut(s) 203
BpuEI CTTGAG 1 cut(s) 1172
Bsa29I ATCGAT 1 cut(s) 288
BsaAI YACGTR 2 cut(s) 187, 854
BsaBI GATNNNNATC 1 cut(s) 1056
BsaI GGTCTC 2 cut(s) 566, 606
BsaJI CCNNGG 3 cut(s) 59, 620, 1358
BsaWI WCCGGW 1 cut(s) 591
BsaXI ACNNNNNCTCC 2 cut(s) 97, 127
Bsc4I CCNNNNNNNGG 5 cut(s) 236, 377, 378, 981, 1244
Bse118I RCCGGY 1 cut(s) 236
Bse3DI GCAATG 3 cut(s) 301, 648, 952
Bse8I GATNNNNATC 1 cut(s) 1056
BseBI CCWGG 3 cut(s) 60, 933, 1082
BseCI ATCGAT 1 cut(s) 288
BseDI CCNNGG 3 cut(s) 59, 620, 1358
BseGI GGATG 5 cut(s) 390, 514, 772, 778, 1368
BseJI GATNNNNATC 1 cut(s) 1056
BseLI CCNNNNNNNGG 5 cut(s) 236, 377, 378, 981, 1244
BseMI GCAATG 3 cut(s) 301, 648, 952
BseMII CTCAG 2 cut(s) 217, 1328
BseRI GAGGAG 2 cut(s) 105, 651
BseSI GKGCMC 1 cut(s) 222
BseXI GCAGC 5 cut(s) 59, 342, 736, 1000, 1105
BseYI CCCAGC 1 cut(s) 413
BsgI GTGCAG 2 cut(s) 174, 999
Bsh1236I CGCG 2 cut(s) 200, 489
Bsh1285I CGRYCG 1 cut(s) 241
BshFI GGCC 6 cut(s) 43, 212, 276, 323, 580, 625
BshNI GGYRCC 1 cut(s) 1261
BshVI ATCGAT 1 cut(s) 288
BsiEI CGRYCG 1 cut(s) 241
BsiHKCI CYCGRG 2 cut(s) 563, 609
BsiSI CCGG 2 cut(s) 237, 592
BslFI GGGAC 1 cut(s) 1141
BslI CCNNNNNNNGG 5 cut(s) 236, 377, 378, 981, 1244
BsmAI GTCTC 4 cut(s) 20, 47, 566, 606
BsmFI GGGAC 1 cut(s) 1141
BsnI GGCC 6 cut(s) 43, 212, 276, 323, 580, 625
Bso31I GGTCTC 2 cut(s) 566, 606
BsoBI CYCGRG 2 cut(s) 563, 609
Bsp1286I GDGCHC 2 cut(s) 222, 390
Bsp143I GATC 5 cut(s) 75, 447, 868, 985, 1064
Bsp1720I GCTNAGC 1 cut(s) 203
BspACI CCGC 2 cut(s) 50, 764
BspANI GGCC 6 cut(s) 43, 212, 276, 323, 580, 625
BspCNI CTCAG 2 cut(s) 216, 1327
BspDI ATCGAT 1 cut(s) 288
BspFNI CGCG 2 cut(s) 200, 489
BspLI GGNNCC 3 cut(s) 307, 495, 1263
BspMI ACCTGC 1 cut(s) 812
BspPI GGATC 2 cut(s) 83, 993
BspT107I GGYRCC 1 cut(s) 1261
BspTNI GGTCTC 2 cut(s) 566, 606
BsrDI GCAATG 3 cut(s) 301, 648, 952
BsrFI RCCGGY 1 cut(s) 236
BssAI RCCGGY 1 cut(s) 236
BssECI CCNNGG 3 cut(s) 59, 620, 1358
BssMI GATC 5 cut(s) 75, 447, 868, 985, 1064
BssSI CACGAG 1 cut(s) 498
Bst2BI CACGAG 1 cut(s) 498
Bst2UI CCWGG 3 cut(s) 60, 933, 1082
Bst4CI ACNGT 3 cut(s) 34, 697, 1110
BstAPI GCANNNNNTGC 1 cut(s) 336
BstBAI YACGTR 2 cut(s) 187, 854
BstC8I GCNNGC 5 cut(s) 20, 45, 157, 844, 1018
BstDEI CTNAG 4 cut(s) 85, 203, 976, 1314
BstF5I GGATG 5 cut(s) 390, 514, 772, 778, 1368
BstFNI CGCG 2 cut(s) 200, 489
BstHHI GCGC 2 cut(s) 202, 681
BstKTI GATC 5 cut(s) 78, 450, 871, 988, 1067
BstMAI GTCTC 4 cut(s) 20, 47, 566, 606
BstMBI GATC 5 cut(s) 75, 447, 868, 985, 1064
BstMCI CGRYCG 1 cut(s) 241
BstMWI GCNNNNNNNGC 5 cut(s) 305, 314, 336, 848, 1315
BstNI CCWGG 3 cut(s) 60, 933, 1082
BstNSI RCATGY 2 cut(s) 22, 184
BstSCI CCNGG 3 cut(s) 58, 931, 1080
BstSFI CTRYAG 1 cut(s) 759
BstSLI GKGCMC 1 cut(s) 222
BstUI CGCG 2 cut(s) 200, 489
BstV1I GCAGC 5 cut(s) 59, 342, 736, 1000, 1105
BstV2I GAAGAC 2 cut(s) 104, 476
BstX2I RGATCY 2 cut(s) 75, 985
BstYI RGATCY 2 cut(s) 75, 985
Bsu15I ATCGAT 1 cut(s) 288
BsuRI GGCC 6 cut(s) 43, 212, 276, 323, 580, 625
BsuTUI ATCGAT 1 cut(s) 288
BtsCI GGATG 5 cut(s) 390, 514, 772, 778, 1368
BtsIMutI CAGTG 1 cut(s) 39
BveI ACCTGC 1 cut(s) 812
Cac8I GCNNGC 5 cut(s) 20, 45, 157, 844, 1018
CaiI CAGNNNCTG 1 cut(s) 1108
CfoI GCGC 2 cut(s) 202, 681
Cfr10I RCCGGY 1 cut(s) 236
Cfr13I GGNCC 4 cut(s) 211, 493, 589, 906
ClaI ATCGAT 1 cut(s) 288
CseI GACGC 2 cut(s) 206, 1085
CsiI ACCWGGT 1 cut(s) 931
Csp6I GTAC 1 cut(s) 1262
CviQI GTAC 1 cut(s) 1262
DdeI CTNAG 4 cut(s) 85, 203, 976, 1314
DpnI GATC 5 cut(s) 77, 449, 870, 987, 1066
DpnII GATC 5 cut(s) 75, 447, 868, 985, 1064
EaeI YGGCCR 3 cut(s) 274, 321, 578
Eco24I GRGCYC 1 cut(s) 390
Eco31I GGTCTC 2 cut(s) 566, 606
Eco32I GATATC 2 cut(s) 420, 1326
Eco47I GGWCC 3 cut(s) 493, 589, 906
Eco57I CTGAAG 3 cut(s) 212, 669, 1073
Eco72I CACGTG 2 cut(s) 187, 854
Eco88I CYCGRG 2 cut(s) 563, 609
EcoO109I RGGNCCY 1 cut(s) 211
EcoRI GAATTC 1 cut(s) 374
EcoRII CCWGG 3 cut(s) 58, 931, 1080
EcoRV GATATC 2 cut(s) 420, 1326
EcoT38I GRGCYC 1 cut(s) 390
FalI AAGNNNNNCTT 2 cut(s) 1328, 1360
FaqI GGGAC 1 cut(s) 1141
FauNDI CATATG 1 cut(s) 1320
FbaI TGATCA 1 cut(s) 868
FblI GTMKAC 1 cut(s) 1207
Fnu4HI GCNGC 5 cut(s) 48, 331, 725, 1014, 1094
FokI GGATG 4 cut(s) 377, 521, 779, 785
FriOI GRGCYC 1 cut(s) 390
Fsp4HI GCNGC 5 cut(s) 48, 331, 725, 1014, 1094
FspBI CTAG 2 cut(s) 860, 1266
GlaI GCGC 2 cut(s) 201, 680
GluI GCNGC 5 cut(s) 48, 331, 725, 1014, 1094
GsaI CCCAGC 1 cut(s) 417
HaeIII GGCC 6 cut(s) 43, 212, 276, 323, 580, 625
HapII CCGG 2 cut(s) 237, 592
HgaI GACGC 2 cut(s) 206, 1085
HhaI GCGC 2 cut(s) 202, 681
Hin6I GCGC 2 cut(s) 200, 679
HinP1I GCGC 2 cut(s) 200, 679
HincII GTYRAC 2 cut(s) 10, 750
HindII GTYRAC 2 cut(s) 10, 750
HinfI GANTC 2 cut(s) 55, 1129
HpaII CCGG 2 cut(s) 237, 592
HphI GGTGA 4 cut(s) 49, 106, 365, 635
Hpy166II GTNNAC 6 cut(s) 10, 493, 750, 801, 857, 1208
Hpy188I TCNGA 6 cut(s) 447, 508, 547, 959, 1231, 1362
Hpy188III TCNNGA 8 cut(s) 371, 379, 563, 736, 872, 909, 1103, 1151
Hpy8I GTNNAC 6 cut(s) 10, 493, 750, 801, 857, 1208
HpyAV CCTTC 4 cut(s) 187, 257, 897, 1243
HpyCH4III ACNGT 3 cut(s) 34, 697, 1110
HpyCH4IV ACGT 4 cut(s) 12, 186, 853, 1341
HpyF10VI GCNNNNNNNGC 5 cut(s) 305, 314, 336, 848, 1315
HpyF3I CTNAG 4 cut(s) 85, 203, 976, 1314
HpySE526I ACGT 4 cut(s) 12, 186, 853, 1341
HspAI GCGC 2 cut(s) 200, 679
KpnI GGTACC 1 cut(s) 1265
Ksp22I TGATCA 1 cut(s) 868
Kzo9I GATC 5 cut(s) 75, 447, 868, 985, 1064
LmnI GCTCC 2 cut(s) 305, 721
Lsp1109I GCAGC 5 cut(s) 59, 342, 736, 1000, 1105
LweI GCATC 1 cut(s) 1177
MabI ACCWGGT 1 cut(s) 931
MaeI CTAG 2 cut(s) 860, 1266
MaeII ACGT 4 cut(s) 12, 186, 853, 1341
MaeIII GTNAC 4 cut(s) 66, 697, 935, 1290
MalI GATC 5 cut(s) 77, 449, 870, 987, 1066
MboI GATC 5 cut(s) 75, 447, 868, 985, 1064
MboII GAAGA 4 cut(s) 109, 414, 476, 1052
MflI RGATCY 2 cut(s) 75, 985
MhlI GDGCHC 2 cut(s) 222, 390
MluCI AATT 7 cut(s) 169, 374, 573, 704, 1172, 1212, 1233
MlyI GAGTC 2 cut(s) 49, 1123
MseI TTAA 1 cut(s) 1350
MslI CAYNNNNRTG 1 cut(s) 185
MspA1I CMGCKG 2 cut(s) 50, 413
MspI CCGG 2 cut(s) 237, 592
MspR9I CCNGG 3 cut(s) 60, 933, 1082
MvaI CCWGG 3 cut(s) 60, 933, 1082
MvnI CGCG 2 cut(s) 200, 489
MwoI GCNNNNNNNGC 5 cut(s) 305, 314, 336, 848, 1315
NdeI CATATG 1 cut(s) 1320
NdeII GATC 5 cut(s) 75, 447, 868, 985, 1064
NlaIV GGNNCC 3 cut(s) 307, 495, 1263
NmeAIII GCCGAG 1 cut(s) 601
NmuCI GTSAC 2 cut(s) 66, 1290
NspI RCATGY 2 cut(s) 22, 184
PaeI GCATGC 1 cut(s) 22
PaeR7I CTCGAG 1 cut(s) 563
PkrI GCNGC 5 cut(s) 49, 332, 726, 1015, 1095
PleI GAGTC 2 cut(s) 49, 1123
PmaCI CACGTG 2 cut(s) 187, 854
PmlI CACGTG 2 cut(s) 187, 854
PpsI GAGTC 2 cut(s) 49, 1123
Ppu21I YACGTR 2 cut(s) 187, 854
Psp1406I AACGTT 1 cut(s) 12
Psp6I CCWGG 3 cut(s) 58, 931, 1080
PspCI CACGTG 2 cut(s) 187, 854
PspFI CCCAGC 1 cut(s) 413
PspGI CCWGG 3 cut(s) 58, 931, 1080
PspN4I GGNNCC 3 cut(s) 307, 495, 1263
PspPI GGNCC 4 cut(s) 211, 493, 589, 906
PstNI CAGNNNCTG 1 cut(s) 1108
PsuI RGATCY 2 cut(s) 75, 985
PvuII CAGCTG 1 cut(s) 413
RsaI GTAC 1 cut(s) 1263
RsaNI GTAC 1 cut(s) 1262
RseI CAYNNNNRTG 1 cut(s) 185
SaqAI TTAA 1 cut(s) 1350
SatI GCNGC 5 cut(s) 48, 331, 725, 1014, 1094
Sau3AI GATC 5 cut(s) 75, 447, 868, 985, 1064
Sau96I GGNCC 4 cut(s) 211, 493, 589, 906
SchI GAGTC 2 cut(s) 49, 1123
ScrFI CCNGG 3 cut(s) 60, 933, 1082
SduI GDGCHC 2 cut(s) 222, 390
SexAI ACCWGGT 1 cut(s) 931
SfaNI GCATC 1 cut(s) 1177
SfcI CTRYAG 1 cut(s) 759
Sfr274I CTCGAG 1 cut(s) 563
SinI GGWCC 3 cut(s) 493, 589, 906
SlaI CTCGAG 1 cut(s) 563
SmiMI CAYNNNNRTG 1 cut(s) 185
SmlI CTYRAG 2 cut(s) 563, 1151
SmoI CTYRAG 2 cut(s) 563, 1151
SphI GCATGC 1 cut(s) 22
Sse9I AATT 7 cut(s) 169, 374, 573, 704, 1172, 1212, 1233
SsiI CCGC 2 cut(s) 50, 764
SspMI CTAG 2 cut(s) 860, 1266
StyD4I CCNGG 3 cut(s) 58, 931, 1080
TaaI ACNGT 3 cut(s) 34, 697, 1110
TaiI ACGT 4 cut(s) 15, 189, 856, 1344
TaqI TCGA 7 cut(s) 282, 288, 564, 664, 995, 1063, 1074
TasI AATT 7 cut(s) 169, 374, 573, 704, 1172, 1212, 1233
Tru1I TTAA 1 cut(s) 1350
Tru9I TTAA 1 cut(s) 1350
TscAI CASTG 1 cut(s) 39
TseFI GTSAC 2 cut(s) 66, 1290
TseI GCWGC 5 cut(s) 47, 330, 724, 1013, 1093
Tsp45I GTSAC 2 cut(s) 66, 1290
TspDTI ATGAA 2 cut(s) 520, 794
TspGWI ACGGA 1 cut(s) 1207
TspRI CASTG 1 cut(s) 39
VpaK11BI GGWCC 3 cut(s) 493, 589, 906
XapI RAATTY 3 cut(s) 374, 704, 1233
XceI RCATGY 2 cut(s) 22, 184
XhoI CTCGAG 1 cut(s) 563
XmiI GTMKAC 1 cut(s) 1207
XspI CTAG 2 cut(s) 860, 1266
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.