Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0000233

Physical Location & Seq

Genomic Coordinates Forward (+)

72925998 .. 72927359

Gene Structure 1362 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG455100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

ATGGCGGTCAACATCAGTGTGATTGAGTCGACAGTGGTGAGGCCAGCGGCGGAGACACCTCGACAGTCGTTGTGGCTCTCGAACATGGACTTGGTGATGTCCAGCACTCACACTCCCAGTATTTATATCTACAAGCCAAAAGTCGATGCTGGTGCAGACAAGGACAGTAATTTCTTTGACAGGCATGTCTTGAAGGACGCGCTCGGCAAGGTCCTTATCCCTTTTTACCCCATGGCCGGCCGCCTGAAGCGAAAAATGGATGAGGGAGAGAAGGGTCGTCTCGAAGTAGATTGCAATGCGGAGGGGGCCTTGTTTGTTGTGGCCCATAGCAGCTCTTGCATCGATGACTTCGGCGATTTTGCACCCACTCCCGACTTCGGGACAGGGAGAGGGCTCCTCCCTACCGTTGACTACTCCGGCGGGATATCTTCTTATCCTCTGTTGCTGGTACAGATCACATATTTAAAATGCGGTGGAGTGGCACTTGGTGTTCGCATAGACCATCACTTAGCAGATGGATTTTCTGCTCTTCACTTTATAAATACATGGTCTGATATGGCTCGTGGTCTGGACCTTGCAATCCCACCAACGATCGACAGGACATTACTTCGTGCTCGAGACCCACCTCGAACTTTACTCAACCACAATCACCACATTGTATACCAACCTCCTAATGACCACGATCAACATGAAAGCACCGGGGCAGAAACAGTAGTCTCGGTTCTTACATTTACTAGGGAGCAGCTCAACATCTTGAAAGCTATGTCGACCACGACAAAGGAGGAAGACGATGATATGAATATCAAGTATACCTCATTTGAGGTGTTTTCAGGTCATGTATGGAGATGTGCCTGCAAGGCACGTGAACTAGCTAATGATCAAGAAACCAACTTATTCTTTGCTGTAAACGGAAGGACCAGATTGCAACCCCCACTCCCACCTGGTTACTTTGGTAATGTGATTTTCAGAGCCTCAGCAACAGCCATAGCAGGAGATCTCATATCAAAACCATTATCGTATGCTGCAAGCTGCATTCACAATGCTGTGGTGCGTATGGATGATGATTATGTTCGATCGATACTCGACTATCTTGAACTTCAGCAGCGCCATCAGGATTTGTCAAGCCTTGCTCTTGTGACTCATGTTAGGTGCCCTAATCTTGCGATAACTAGCTGGTTTACGCTTCCCCTCTATGATGCTGATTTTGGGTGGGGGCGACCAAGTTTCATGGGACGCGCTGGAATTCCAAGTGAAGGAAAGGCTTACATGATACCAAGTGCAACTAATGATGGTTTCTCGCTGTGCATAAATTTGCATTCTCGGTATATGAACACATTTTCCAAGTTGGTTTATGACATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

453

Amino Acids

50.31

Weight (kDa)

5.96

Isoelectric Point (pI)

39.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transferase	PF02458	4 - 449	6.1e-103	Transferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000233)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G48930
fragaria_vesca	FvH4_2g37730 FvH4_3g06650 FvH4_3g06650 FvH4_3g06650 FvH4_3g06690 FvH4_3g06690 FvH4_3g06690 FvH4_3g37080 FvH4_3g44400 FvH4_3g44420 FvH4_3g44430 FvH4_3g44440 FvH4_6g28410
malus_domestica	MD09G1226600.v1.1 MD09G1230000.v1.1 MD09G1230100.v1.1 MD17G1224900.v1.1 MD17G1225100.v1.1
prunus_persica	Prupe.3G100800_v2.0.a1 Prupe.3G101000_v2.0.a1 Prupe.3G101400_v2.0.a1 Prupe.3G101500_v2.0.a1 Prupe.3G101600_v2.0.a1 Prupe.3G101900_v2.0.a1
pyrus_communis	pycom09g14560 pycom09g14850 pycom09g14880 pycom17g22900
rosa_chinensis	RchiOBHm_Chr2g0132521 RchiOBHm_Chr2g0132571 RchiOBHm_Chr2g0132581 RchiOBHm_Chr2g0132601 RchiOBHm_Chr2g0132651 RchiOBHm_Chr5g0066491 RchiOBHm_Chr5g0066541 RchiOBHm_Chr5g0066631 RchiOBHm_Chr5g0066641 RchiOBHm_Chr5g0066711 RchiOBHm_Chr5g0066721 RchiOBHm_Chr5g0066761 RchiOBHm_Chr5g0066771 RchiOBHm_Chr5g0066791 RchiOBHm_Chr5g0066811 RchiOBHm_Chr5g0081061 RchiOBHm_Chr5g0081111
rosa_laevigata	RLG00000019264 RLG00000019269 RLG00000019270 RLG00000035871 RLG00000035873 RLG00000035874 RLG00000035875 RLG00000036910
rosa_multiflora	Rmu_co8101688.1_g000001 Rmu_co8204910.1_g000001 Rmu_co8308169.1_g000001 Rmu_sc0000605.1_g000027 Rmu_sc0000605.1_g000029 Rmu_sc0000605.1_g000045 Rmu_sc0000605.1_g000049 Rmu_sc0005460.1_g000001 Rmu_sc0005460.1_g000009 Rmu_sc0008823.1_g000006 Rmu_sc0012629.1_g000001 Rmu_sc0014046.1_g000003 Rmu_sc0025032.1_g000001 Rmu_ssc0000074.1_g000018 Rmu_ssc0000074.1_g000029 Rmu_ssc0000432.1_g000085 Rmu_ssc0000432.1_g000114
rosa_roxburghii	Rroxscaffold_1G00002330 Rroxscaffold_1G00002370 Rroxscaffold_1G00014290 Rroxscaffold_1G00014320 Rroxscaffold_1G00014350 Rroxscaffold_1G00014370 Rroxscaffold_1G00014380 Rroxscaffold_1G00014500 Rroxscaffold_1G00014530 Rroxscaffold_1G00014550 Rroxscaffold_2G00111750 Rroxscaffold_2G00111800 Rroxscaffold_2G00111850
rosa_rugosa	Rorug02G0305200 Rorug02G0305300 Rorug02G0305900 Rorug02G0305900 Rorug05G0378800 Rorug05G0379000 Rorug05G0379000 Rorug05G0473400
rosa_samantha	Rh2AG358000 Rh2AG358100 Rh2AG358200 Rh2AG358300 Rh2AG358600 Rh2AG358700 Rh2AG358900 Rh2BG364400 Rh2BG364900 Rh2BG365000 Rh2BG365100 Rh2BG365500 Rh2CG341500 Rh2CG342100 Rh2DG381100 Rh2DG381500 Rh2DG381800 Rh5AG525900 Rh5BG453900 Rh5BG454100 Rh5BG454200 Rh5BG454500 Rh5BG454700 Rh5BG455100 Rh5BG455300 Rh5BG549800 Rh5BG550200 Rh5CG476200 Rh5CG476400 Rh5CG476500 Rh5CG476800 Rh5CG477000 Rh5CG477200 Rh5CG477400 Rh5CG572500 Rh5CG573100 Rh5DG469000 Rh5DG469200 Rh5DG469900 Rh5DG470000 Rh5DG470100 Rh5DG559900
rosa_wichuraiana	Rw0G002550 Rw0G012040 Rw2G029120 Rw2G029210 Rw5G040950 Rw5G040970 Rw5G048860

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	539
AasI	GACNNNNNNGTC	1 cut(s)	185
AccB1I	GGYRCC	1 cut(s)	1149
AccI	GTMKAC	4 cut(s)	29, 660, 767, 809
AccII	CGCG	2 cut(s)	200, 1236
AciI	CCGC	7 cut(s)	5, 47, 50, 241, 299, 420, 471
AcoI	YGGCCR	2 cut(s)	234, 238
AcsI	RAATTY	2 cut(s)	1242, 1309
AcuI	CTGAAG	2 cut(s)	266, 1082
AcvI	CACGTG	1 cut(s)	863
AdeI	CACNNNGTG	1 cut(s)	488
AfaI	GTAC	1 cut(s)	450
AfiI	CCNNNNNNNGG	4 cut(s)	236, 377, 378, 1253
AgsI	TTSAA	3 cut(s)	193, 757, 1094
AjnI	CCWGG	1 cut(s)	940
AjuI	GAANNNNNNNTTGG	2 cut(s)	74, 106
AloI	GAACNNNNNNTCC	2 cut(s)	1322, 1354
AluBI	AGCT	6 cut(s)	333, 745, 761, 872, 1029, 1173
AluI	AGCT	6 cut(s)	333, 745, 761, 872, 1029, 1173
Alw21I	GWGCWC	1 cut(s)	616
Alw26I	GTCTC	4 cut(s)	47, 284, 612, 721
Ama87I	CYCGRG	1 cut(s)	615
AoxI	GGCC	5 cut(s)	41, 234, 238, 306, 321
ApeKI	GCWGC	5 cut(s)	330, 742, 1022, 1029, 1102
ApoI	RAATTY	2 cut(s)	1242, 1309
AspLEI	GCGC	3 cut(s)	202, 1107, 1238
AspS9I	GGNCC	5 cut(s)	211, 306, 322, 571, 915
AsuC2I	CCSGG	1 cut(s)	700
AsuHPI	GGTGA	3 cut(s)	49, 106, 641
AvaI	CYCGRG	1 cut(s)	615
AvaII	GGWCC	3 cut(s)	211, 571, 915
BaeGI	GKGCMC	1 cut(s)	1154
BanI	GGYRCC	1 cut(s)	1149
BanII	GRGCYC	1 cut(s)	396
BauI	CACGAG	1 cut(s)	561
BbrPI	CACGTG	1 cut(s)	863
BbsI	GAAGAC	1 cut(s)	792
Bbv12I	GWGCWC	1 cut(s)	616
BbvCI	CCTCAGC	1 cut(s)	973
BbvI	GCAGC	5 cut(s)	342, 754, 1009, 1016, 1114
BccI	CCATC	4 cut(s)	509, 510, 1116, 1283
BcgI	CGANNNNNNTGC	2 cut(s)	134, 168
BciT130I	CCWGG	1 cut(s)	942
BclI	TGATCA	1 cut(s)	877
BcnI	CCSGG	1 cut(s)	700
BcoDI	GTCTC	4 cut(s)	47, 284, 612, 721
BfaI	CTAG	3 cut(s)	735, 869, 1170
BfoI	RGCGCY	1 cut(s)	1108
BglI	GCCNNNNNGGC	1 cut(s)	857
BglII	AGATCT	1 cut(s)	994
BisI	GCNGC	7 cut(s)	48, 241, 331, 743, 1023, 1030, 1103
BlsI	GCNGC	7 cut(s)	49, 242, 332, 744, 1024, 1031, 1104
Bme1390I	CCNGG	2 cut(s)	700, 942
Bme18I	GGWCC	3 cut(s)	211, 571, 915
BmeT110I	CYCGRG	1 cut(s)	615
BmgT120I	GGNCC	5 cut(s)	211, 306, 322, 571, 915
BmiI	GGNNCC	3 cut(s)	307, 395, 1151
BmrFI	CCNGG	2 cut(s)	700, 942
BmrI	ACTGGG	1 cut(s)	111
BmsI	GCATC	3 cut(s)	136, 348, 1186
BmuI	ACTGGG	1 cut(s)	111
BpiI	GAAGAC	1 cut(s)	792
BplI	GAGNNNNNCTC	2 cut(s)	381, 413
Bpu10I	CCTNAGC	1 cut(s)	973
BpuMI	CCSGG	1 cut(s)	700
Bsa29I	ATCGAT	2 cut(s)	342, 1076
BsaAI	YACGTR	1 cut(s)	863
BsaI	GGTCTC	1 cut(s)	612
BsaJI	CCNNGG	2 cut(s)	231, 699
BsaXI	ACNNNNNCTCC	4 cut(s)	97, 127, 918, 948
Bsc4I	CCNNNNNNNGG	4 cut(s)	236, 377, 378, 1253
Bse118I	RCCGGY	1 cut(s)	236
Bse1I	ACTGG	1 cut(s)	117
Bse3DI	GCAATG	1 cut(s)	301
BseBI	CCWGG	1 cut(s)	942
BseCI	ATCGAT	2 cut(s)	342, 1076
BseDI	CCNNGG	2 cut(s)	231, 699
BseGI	GGATG	2 cut(s)	265, 1063
BseLI	CCNNNNNNNGG	4 cut(s)	236, 377, 378, 1253
BseMI	GCAATG	1 cut(s)	301
BseMII	CTCAG	1 cut(s)	987
BseNI	ACTGG	1 cut(s)	117
BseRI	GAGGAG	1 cut(s)	386
BseSI	GKGCMC	1 cut(s)	1154
BseX3I	CGGCCG	1 cut(s)	238
BseXI	GCAGC	5 cut(s)	342, 754, 1009, 1016, 1114
BsgI	GTGCAG	1 cut(s)	174
Bsh1236I	CGCG	2 cut(s)	200, 1236
Bsh1285I	CGRYCG	3 cut(s)	241, 594, 1076
BshFI	GGCC	5 cut(s)	43, 236, 240, 308, 323
BshNI	GGYRCC	1 cut(s)	1149
BshVI	ATCGAT	2 cut(s)	342, 1076
BsiEI	CGRYCG	3 cut(s)	241, 594, 1076
BsiHKAI	GWGCWC	1 cut(s)	616
BsiHKCI	CYCGRG	1 cut(s)	615
BsiSI	CCGG	3 cut(s)	237, 417, 699
BslFI	GGGAC	2 cut(s)	394, 1245
BslI	CCNNNNNNNGG	4 cut(s)	236, 377, 378, 1253
BsmAI	GTCTC	4 cut(s)	47, 284, 612, 721
BsmBI	CGTCTC	1 cut(s)	284
BsmFI	GGGAC	2 cut(s)	394, 1245
BsmI	GAATGC	2 cut(s)	1032, 1315
BsnI	GGCC	5 cut(s)	43, 236, 240, 308, 323
Bso31I	GGTCTC	1 cut(s)	612
BsoBI	CYCGRG	1 cut(s)	615
Bsp1286I	GDGCHC	3 cut(s)	396, 616, 1154
Bsp143I	GATC	6 cut(s)	453, 591, 682, 877, 994, 1073
Bsp19I	CCATGG	1 cut(s)	231
BspACI	CCGC	7 cut(s)	5, 47, 50, 241, 299, 420, 471
BspANI	GGCC	5 cut(s)	43, 236, 240, 308, 323
BspCNI	CTCAG	1 cut(s)	986
BspDI	ATCGAT	2 cut(s)	342, 1076
BspFNI	CGCG	2 cut(s)	200, 1236
BspLI	GGNNCC	3 cut(s)	307, 395, 1151
BspQI	GCTCTTC	1 cut(s)	534
BspT107I	GGYRCC	1 cut(s)	1149
BspTNI	GGTCTC	1 cut(s)	612
BsrDI	GCAATG	1 cut(s)	301
BsrFI	RCCGGY	1 cut(s)	236
BsrI	ACTGG	1 cut(s)	117
BssAI	RCCGGY	1 cut(s)	236
BssECI	CCNNGG	2 cut(s)	231, 699
BssMI	GATC	6 cut(s)	453, 591, 682, 877, 994, 1073
BssNAI	GTATAC	2 cut(s)	661, 810
BssSI	CACGAG	1 cut(s)	561
BssT1I	CCWWGG	1 cut(s)	231
Bst1107I	GTATAC	2 cut(s)	661, 810
Bst2BI	CACGAG	1 cut(s)	561
Bst2UI	CCWGG	1 cut(s)	942
Bst4CI	ACNGT	5 cut(s)	34, 66, 167, 406, 712
Bst6I	CTCTTC	1 cut(s)	534
BstAPI	GCANNNNNTGC	1 cut(s)	336
BstBAI	YACGTR	1 cut(s)	863
BstC8I	GCNNGC	4 cut(s)	45, 238, 853, 1027
BstDEI	CTNAG	2 cut(s)	508, 973
BstDSI	CCRYGG	1 cut(s)	231
BstF5I	GGATG	2 cut(s)	265, 1063
BstFNI	CGCG	2 cut(s)	200, 1236
BstH2I	RGCGCY	1 cut(s)	1108
BstHHI	GCGC	3 cut(s)	202, 1107, 1238
BstKTI	GATC	6 cut(s)	456, 594, 685, 880, 997, 1076
BstMAI	GTCTC	4 cut(s)	47, 284, 612, 721
BstMBI	GATC	6 cut(s)	453, 591, 682, 877, 994, 1073
BstMCI	CGRYCG	3 cut(s)	241, 594, 1076
BstMWI	GCNNNNNNNGC	3 cut(s)	305, 336, 857
BstNI	CCWGG	1 cut(s)	942
BstNSI	RCATGY	1 cut(s)	188
BstSCI	CCNGG	2 cut(s)	698, 940
BstSLI	GKGCMC	1 cut(s)	1154
BstUI	CGCG	2 cut(s)	200, 1236
BstV1I	GCAGC	5 cut(s)	342, 754, 1009, 1016, 1114
BstV2I	GAAGAC	1 cut(s)	792
BstX2I	RGATCY	1 cut(s)	994
BstYI	RGATCY	1 cut(s)	994
BstZ17I	GTATAC	2 cut(s)	661, 810
BstZI	CGGCCG	1 cut(s)	238
Bsu15I	ATCGAT	2 cut(s)	342, 1076
BsuRI	GGCC	5 cut(s)	43, 236, 240, 308, 323
BsuTUI	ATCGAT	2 cut(s)	342, 1076
BtgI	CCRYGG	1 cut(s)	231
BtsCI	GGATG	2 cut(s)	265, 1063
BtsIMutI	CAGTG	2 cut(s)	22, 39
Cac8I	GCNNGC	4 cut(s)	45, 238, 853, 1027
CfoI	GCGC	3 cut(s)	202, 1107, 1238
Cfr10I	RCCGGY	1 cut(s)	236
Cfr13I	GGNCC	5 cut(s)	211, 306, 322, 571, 915
ClaI	ATCGAT	2 cut(s)	342, 1076
CseI	GACGC	2 cut(s)	206, 1242
CsiI	ACCWGGT	1 cut(s)	940
Csp6I	GTAC	1 cut(s)	449
CviAII	CATG	9 cut(s)	85, 185, 232, 546, 689, 836, 1142, 1228, 1267
CviQI	GTAC	1 cut(s)	449
DdeI	CTNAG	2 cut(s)	508, 973
DpnI	GATC	6 cut(s)	455, 593, 684, 879, 996, 1075
DpnII	GATC	6 cut(s)	453, 591, 682, 877, 994, 1073
DraI	TTTAAA	1 cut(s)	465
DraIII	CACNNNGTG	1 cut(s)	488
DrdI	GACNNNNNNGTC	1 cut(s)	185
DseDI	GACNNNNNNGTC	1 cut(s)	185
EaeI	YGGCCR	2 cut(s)	234, 238
EagI	CGGCCG	1 cut(s)	238
Eam1104I	CTCTTC	1 cut(s)	534
EarI	CTCTTC	1 cut(s)	534
EciI	GGCGGA	1 cut(s)	65
EclXI	CGGCCG	1 cut(s)	238
Eco130I	CCWWGG	1 cut(s)	231
Eco24I	GRGCYC	1 cut(s)	396
Eco31I	GGTCTC	1 cut(s)	612
Eco32I	GATATC	1 cut(s)	426
Eco47I	GGWCC	3 cut(s)	211, 571, 915
Eco52I	CGGCCG	1 cut(s)	238
Eco57I	CTGAAG	2 cut(s)	266, 1082
Eco72I	CACGTG	1 cut(s)	863
Eco88I	CYCGRG	1 cut(s)	615
EcoO109I	RGGNCCY	2 cut(s)	211, 306
EcoRI	GAATTC	1 cut(s)	1242
EcoRII	CCWGG	1 cut(s)	940
EcoRV	GATATC	1 cut(s)	426
EcoT14I	CCWWGG	1 cut(s)	231
EcoT38I	GRGCYC	1 cut(s)	396
ErhI	CCWWGG	1 cut(s)	231
Esp3I	CGTCTC	1 cut(s)	284
FaeI	CATG	9 cut(s)	88, 188, 235, 549, 692, 839, 1145, 1231, 1270
FaqI	GGGAC	2 cut(s)	394, 1245
FatI	CATG	9 cut(s)	84, 184, 231, 545, 688, 835, 1141, 1227, 1266
FauI	CCCGC	1 cut(s)	413
FbaI	TGATCA	1 cut(s)	877
FblI	GTMKAC	4 cut(s)	29, 660, 767, 809
Fnu4HI	GCNGC	7 cut(s)	48, 241, 331, 743, 1023, 1030, 1103
FokI	GGATG	2 cut(s)	272, 1070
FriOI	GRGCYC	1 cut(s)	396
FseI	GGCCGGCC	1 cut(s)	240
Fsp4HI	GCNGC	7 cut(s)	48, 241, 331, 743, 1023, 1030, 1103
FspBI	CTAG	3 cut(s)	735, 869, 1170
GlaI	GCGC	3 cut(s)	201, 1106, 1237
GluI	GCNGC	7 cut(s)	48, 241, 331, 743, 1023, 1030, 1103
HaeII	RGCGCY	1 cut(s)	1108
HaeIII	GGCC	5 cut(s)	43, 236, 240, 308, 323
HapII	CCGG	3 cut(s)	237, 417, 699
HgaI	GACGC	2 cut(s)	206, 1242
HhaI	GCGC	3 cut(s)	202, 1107, 1238
Hin1II	CATG	9 cut(s)	88, 188, 235, 549, 692, 839, 1145, 1231, 1270
Hin6I	GCGC	3 cut(s)	200, 1105, 1236
HinP1I	GCGC	3 cut(s)	200, 1105, 1236
HincII	GTYRAC	4 cut(s)	10, 30, 409, 768
HindII	GTYRAC	4 cut(s)	10, 30, 409, 768
HinfI	GANTC	2 cut(s)	26, 1138
HpaII	CCGG	3 cut(s)	237, 417, 699
HphI	GGTGA	3 cut(s)	49, 106, 641
Hpy166II	GTNNAC	9 cut(s)	10, 30, 409, 661, 768, 810, 866, 907, 1179
Hpy188I	TCNGA	2 cut(s)	553, 968
Hpy8I	GTNNAC	9 cut(s)	10, 30, 409, 661, 768, 810, 866, 907, 1179
HpyAV	CCTTC	4 cut(s)	187, 265, 906, 1247
HpyCH4III	ACNGT	5 cut(s)	34, 66, 167, 406, 712
HpyCH4IV	ACGT	1 cut(s)	862
HpyF10VI	GCNNNNNNNGC	3 cut(s)	305, 336, 857
HpyF3I	CTNAG	2 cut(s)	508, 973
HpySE526I	ACGT	1 cut(s)	862
Hsp92II	CATG	9 cut(s)	88, 188, 235, 549, 692, 839, 1145, 1231, 1270
HspAI	GCGC	3 cut(s)	200, 1105, 1236
KroI	GCCGGC	1 cut(s)	236
KroNI	GCCGGC	1 cut(s)	238
Ksp22I	TGATCA	1 cut(s)	877
Kzo9I	GATC	6 cut(s)	453, 591, 682, 877, 994, 1073
LguI	GCTCTTC	1 cut(s)	534
LmnI	GCTCC	2 cut(s)	399, 739
Lsp1109I	GCAGC	5 cut(s)	342, 754, 1009, 1016, 1114
LweI	GCATC	3 cut(s)	136, 348, 1186
MabI	ACCWGGT	1 cut(s)	940
MaeI	CTAG	3 cut(s)	735, 869, 1170
MaeII	ACGT	1 cut(s)	862
MaeIII	GTNAC	2 cut(s)	944, 1135
MalI	GATC	6 cut(s)	455, 593, 684, 879, 996, 1075
MboI	GATC	6 cut(s)	453, 591, 682, 877, 994, 1073
MboII	GAAGA	3 cut(s)	420, 521, 797
MflI	RGATCY	1 cut(s)	994
MhlI	GDGCHC	3 cut(s)	396, 616, 1154
MluCI	AATT	3 cut(s)	169, 1242, 1309
MlyI	GAGTC	2 cut(s)	35, 1132
MroNI	GCCGGC	1 cut(s)	236
MseI	TTAA	1 cut(s)	464
MslI	CAYNNNNRTG	1 cut(s)	17
MspA1I	CMGCKG	1 cut(s)	47
MspI	CCGG	3 cut(s)	237, 417, 699
MspR9I	CCNGG	2 cut(s)	700, 942
Mva1269I	GAATGC	2 cut(s)	1032, 1315
MvaI	CCWGG	1 cut(s)	942
MvnI	CGCG	2 cut(s)	200, 1236
MwoI	GCNNNNNNNGC	3 cut(s)	305, 336, 857
NaeI	GCCGGC	1 cut(s)	238
NciI	CCSGG	1 cut(s)	700
NcoI	CCATGG	1 cut(s)	231
NdeII	GATC	6 cut(s)	453, 591, 682, 877, 994, 1073
NgoMIV	GCCGGC	1 cut(s)	236
NlaIII	CATG	9 cut(s)	88, 188, 235, 549, 692, 839, 1145, 1231, 1270
NlaIV	GGNNCC	3 cut(s)	307, 395, 1151
NmeAIII	GCCGAG	1 cut(s)	183
NmuCI	GTSAC	1 cut(s)	1135
NspI	RCATGY	1 cut(s)	188
PaeR7I	CTCGAG	1 cut(s)	615
PciSI	GCTCTTC	1 cut(s)	534
PctI	GAATGC	2 cut(s)	1032, 1315
PdiI	GCCGGC	1 cut(s)	238
PkrI	GCNGC	7 cut(s)	49, 242, 332, 744, 1024, 1031, 1104
Ple19I	CGATCG	2 cut(s)	594, 1076
PleI	GAGTC	2 cut(s)	34, 1132
PmaCI	CACGTG	1 cut(s)	863
PmlI	CACGTG	1 cut(s)	863
PpsI	GAGTC	2 cut(s)	34, 1132
Ppu21I	YACGTR	1 cut(s)	863
PpuMI	RGGWCCY	1 cut(s)	211
PsiI	TTATAA	1 cut(s)	539
Psp5II	RGGWCCY	1 cut(s)	211
Psp6I	CCWGG	1 cut(s)	940
PspCI	CACGTG	1 cut(s)	863
PspGI	CCWGG	1 cut(s)	940
PspN4I	GGNNCC	3 cut(s)	307, 395, 1151
PspPI	GGNCC	5 cut(s)	211, 306, 322, 571, 915
PspPPI	RGGWCCY	1 cut(s)	211
PsrI	GAACNNNNNNTAC	2 cut(s)	705, 737
PsuI	RGATCY	1 cut(s)	994
PvuI	CGATCG	2 cut(s)	594, 1076
RigI	GGCCGGCC	1 cut(s)	240
RsaI	GTAC	1 cut(s)	450
RsaNI	GTAC	1 cut(s)	449
RseI	CAYNNNNRTG	1 cut(s)	17
SalI	GTCGAC	2 cut(s)	28, 766
SapI	GCTCTTC	1 cut(s)	534
SaqAI	TTAA	1 cut(s)	464
SatI	GCNGC	7 cut(s)	48, 241, 331, 743, 1023, 1030, 1103
Sau3AI	GATC	6 cut(s)	453, 591, 682, 877, 994, 1073
Sau96I	GGNCC	5 cut(s)	211, 306, 322, 571, 915
SchI	GAGTC	2 cut(s)	35, 1132
ScrFI	CCNGG	2 cut(s)	700, 942
SduI	GDGCHC	3 cut(s)	396, 616, 1154
SexAI	ACCWGGT	1 cut(s)	940
SfaNI	GCATC	3 cut(s)	136, 348, 1186
Sfr274I	CTCGAG	1 cut(s)	615
SinI	GGWCC	3 cut(s)	211, 571, 915
SlaI	CTCGAG	1 cut(s)	615
SmiMI	CAYNNNNRTG	1 cut(s)	17
SmlI	CTYRAG	1 cut(s)	615
SmoI	CTYRAG	1 cut(s)	615
Sse9I	AATT	3 cut(s)	169, 1242, 1309
SsiI	CCGC	7 cut(s)	5, 47, 50, 241, 299, 420, 471
SspMI	CTAG	3 cut(s)	735, 869, 1170
StyD4I	CCNGG	2 cut(s)	698, 940
StyI	CCWWGG	1 cut(s)	231
TaaI	ACNGT	5 cut(s)	34, 66, 167, 406, 712
TaiI	ACGT	1 cut(s)	865
TasI	AATT	3 cut(s)	169, 1242, 1309
TauI	GCSGC	2 cut(s)	50, 243
Tru1I	TTAA	1 cut(s)	464
Tru9I	TTAA	1 cut(s)	464
TscAI	CASTG	2 cut(s)	22, 39
TseFI	GTSAC	1 cut(s)	1135
TseI	GCWGC	5 cut(s)	330, 742, 1022, 1029, 1102
Tsp45I	GTSAC	1 cut(s)	1135
TspDTI	ATGAA	4 cut(s)	705, 812, 1216, 1343
TspGWI	ACGGA	1 cut(s)	924
TspRI	CASTG	2 cut(s)	22, 39
VpaK11BI	GGWCC	3 cut(s)	211, 571, 915
XapI	RAATTY	2 cut(s)	1242, 1309
XceI	RCATGY	1 cut(s)	188
XhoI	CTCGAG	1 cut(s)	615
XmiI	GTMKAC	4 cut(s)	29, 660, 767, 809
XspI	CTAG	3 cut(s)	735, 869, 1170

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.