FvH4_2g00430

eukaryotic translation initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000686
Physical Location & Seq
Reverse (-)
529026 .. 534865
5840 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g00430.t1

Sequence Viewer

Length: 1845 bp
ATGTTCAAGAAGGGAGTGGAAGCGCGGTCGCACCAGAGACTGTCGGGGGCTGACAGGAAGAAGCTCAAGAGGACCGTCCGAGATAGATTTCCCAGGGCTTCCGACGCCGATATCGATGCTCTACTCCCTCCCAAGGTGGAGATTAAGGTTTCAAAGTATCAAAATCGAGTCCTTGTTTATGGCATTGAGGGAGGCTTCCCTATGTTTTTCGATATTGATGGCCGTGGTAAAGAGATTTTTCCCACAGTTTATGCTCTCTGGAAGGTCCCTGATATCTTGCCTTCTTTCATGCTGAAAGGAGGCGAGGTTTCTCGATATGTTATTGGAGGGGCGGATTTGATGTTTCCCGGTATCAGCATACCGGCTGAAGGTTTACCTTCGTTTCTAGCTGGGGAAGCATGGTCGGTTAAAGTTCCAGGAAATCCTGCTCCCATTGCTGTGGGAACTACTACTATGAGTTGCACTGAAGCATTAAAAGCTGGGTTGCGCGGAAAAGCCTTAAAAATTGCTCACTATTATGGTGACTTACTTTGGGAATCAGTTGAGGTCCCTTATGTGCCAAATGCAGGTTTCTATGAGGATGCTGTTTTTGAGGATCCTACTTTGTCATCAGCTCAAGTTTCTGATTCATATGATGGTGCAAATGATGGATCAAATGATCAACTGAATGGCATTAATGATAAGGAAATGGGGCAACATGTTGATGTTGCCGATGTCCAGTCTGAACCAAGTTCTGCTTCAGTTGCACCTATTGATGCTAGGAATGAGATTGCTGAGGAAGCAACTGCACATGTAAGTGATCTGAAGCTAACAGATAATGATTCCGTCGATCAGTCGACTGTGGAGGATAGTCAGGATACACATCCTCTTTCCACTGAGGATGTGGACACGCTTTTGGAGAAATGCCTTTTGCAAGCATTGCATACAACTGTTAAAGACAAAGACCTTCCCATGCCCGGAAGCACTCTATGGTCAAACCATGTTTTACCTTGTAGGCCTTCAGGCATCACATTAGACATCAAGAAATCATCATACAAGAAATTATCGAAGTGGTTACAAGCTAAATGTTCTTCAGGATTGATCAGAGTGAAGGAAGATAAATATAAGAAGGAGTCTGTATTACTTTCTGTTAACCGTACCCATCCAGATTACTCATCGTTCAAGCCAGAGAAACGGCAAGTTGAAGAAGCTGTTAAAACTGGTGTTCCTGTCACTGAAAGCCGGTCGGTCAAAATCCTTGAAGTGGCTGAGATCTATAAACCAAGTGTACATGTAAATCCAGTATTTGCTTCTGTAGGTGCTGACACAGGGGAGCTTTACAGTGCTTTGGATGCCACTGACATTGTATTTAGATATGTTGAAAAGGAAAACATGGTTAAGCCGACTGATAAATCCATTGTGATTTTGGATGCAACATTGTGTGATGGGCTGTTCAAGGGGGCCATAAAAAAAGGTTCAATGTACCCTACAGAAATCCATAAAAGAGACTTGGGAGCAGCATTTGTAAACCGGATGCAACCCCATCACATTGTGACAAGGGGAAATGACTCCGTCGTTCGTAAAGGTGGTTTGAAAACAGTCCAGATAATGACAGAAAGGCGGCAAGGTAATAAGAAAATGACCAAGTTATCAGGACTGGAGACTTTTTTGGTGGATCCTGAAGCCTTGGCATCAGAGCTCCAAAAGAAGTTTGCTTGCAGTACAACAGTGGCAGAACTACCAGGTAAGAAGGGGCTGGAGGTTTTGGTTCAAGGTGGAGTGATAGAGAATCTGGCAAAACACTTGATTGAACAATATGGAATCCCAAAGAGATACATTGAGGTTCTTGATAAAACCAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SUI1

Protein Analysis

615

Amino Acids

67.52

Weight (kDa)

6.54

Isoelectric Point (pI)

40.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pre-PUA PF17832 2 - 90 2.6e-18 Pre-PUA-like domain
PUA_elF2D PF26292 101 - 175 1.2e-21 elF2D, PUA domain
WHD_eIF2D PF25304 296 - 378 9.3e-30 eIF2D winged helix domain
SWIB_eIF2D PF26291 419 - 478 1.4e-09 eIF2D, SWIB domain
SUI1 PF01253 525 - 602 7.9e-22 Translation initiation factor SUI1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000686)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G71350
fragaria_vesca FvH4_2g00430 FvH4_2g00430 FvH4_2g00430 FvH4_2g00430
malus_domestica MD10G1002600.v1.1
prunus_persica Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0249251 RchiOBHm_Chr6g0249261 RchiOBHm_Chr6g0249701 RchiOBHm_Chr6g0249761 RchiOBHm_Chr6g0249851 RchiOBHm_Chr6g0249861 RchiOBHm_Chr6g0249871 RchiOBHm_Chr6g0249891 RchiOBHm_Chr6g0249901 RchiOBHm_Chr6g0249911 RchiOBHm_Chr6g0249981 RchiOBHm_Chr6g0249991 RchiOBHm_Chr6g0250001 RchiOBHm_Chr6g0250151 RchiOBHm_Chr6g0250171 RchiOBHm_Chr6g0250191 RchiOBHm_Chr6g0250211 RchiOBHm_Chr6g0250221 RchiOBHm_Chr6g0250321 RchiOBHm_Chr6g0250391
rosa_laevigata RLG00000015543 RLG00000015548
rosa_multiflora Rmu_sc0000411.1_g000004 Rmu_sc0000411.1_g000009 Rmu_sc0000704.1_g000007 Rmu_sc0000704.1_g000011 Rmu_sc0001209.1_g000038 Rmu_sc0001209.1_g000042 Rmu_sc0001209.1_g000048 Rmu_sc0003293.1_g000005 Rmu_sc0004691.1_g000005 Rmu_sc0004691.1_g000007 Rmu_sc0004691.1_g000009 Rmu_sc0006032.1_g000001 Rmu_sc0006032.1_g000004 Rmu_sc0006032.1_g000005 Rmu_sc0008209.1_g000003 Rmu_sc0008209.1_g000010 Rmu_sc0009002.1_g000001 Rmu_sc0009002.1_g000005 Rmu_sc0009002.1_g000009
rosa_roxburghii Rroxscaffold_3G00218110 Rroxscaffold_7G00217270 Rroxscaffold_7G00217290 Rroxscaffold_7G00217300 Rroxscaffold_7G00217340
rosa_rugosa Rorug05G0494700 Rorug05G0495000 Rorug05G0496000 Rorug05G0498100 Rorug05G0498200
rosa_samantha Rh6AG000200 Rh6AG000300 Rh6AG004700 Rh6AG004800 Rh6AG005200 Rh6AG005300 Rh6AG005600 Rh6BG005500 Rh6BG005600 Rh6CG003700 Rh6DG003600
rosa_wichuraiana Rw6G000560 Rw6G000600 Rw6G000620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 557
AccI GTMKAC 1 cut(s) 836
AccII CGCG 2 cut(s) 25, 489
AciI CCGC 4 cut(s) 25, 332, 489, 1600
AclWI GGATC 5 cut(s) 590, 603, 658, 1649, 1662
AcoI YGGCCR 1 cut(s) 220
AcuI CTGAAG 7 cut(s) 387, 486, 723, 824, 984, 1056, 1680
AcyI GRCGYC 1 cut(s) 105
AdeI CACNNNGTG 1 cut(s) 1531
AfaI GTAC 4 cut(s) 1138, 1269, 1463, 1702
AfiI CCNNNNNNNGG 5 cut(s) 133, 368, 566, 956, 1243
AflIII ACRYGT 3 cut(s) 697, 790, 1270
AjnI CCWGG 4 cut(s) 92, 415, 1720, 1835
AjuI GAANNNNNNNTTGG 2 cut(s) 721, 753
AluBI AGCT 9 cut(s) 64, 389, 479, 614, 808, 1061, 1190, 1315, 1678
AluI AGCT 9 cut(s) 64, 389, 479, 614, 808, 1061, 1190, 1315, 1678
Alw21I GWGCWC 1 cut(s) 1680
Alw26I GTCTC 3 cut(s) 31, 1479, 1634
AlwI GGATC 5 cut(s) 590, 603, 658, 1649, 1662
AlwNI CAGNNNCTG 1 cut(s) 40
AoxI GGCC 3 cut(s) 220, 995, 1440
ApeKI GCWGC 1 cut(s) 1496
AseI ATTAAT 1 cut(s) 675
AspLEI GCGC 2 cut(s) 25, 489
AspS9I GGNCC 4 cut(s) 72, 265, 547, 1440
AsuC2I CCSGG 2 cut(s) 348, 957
AsuHPI GGTGA 1 cut(s) 533
AvaII GGWCC 3 cut(s) 72, 265, 547
BamHI GGATCC 2 cut(s) 595, 1654
BanII GRGCYC 1 cut(s) 1680
Bbv12I GWGCWC 1 cut(s) 1680
BbvCI CCTCAGC 1 cut(s) 774
BbvI GCAGC 1 cut(s) 1508
BccI CCATC 6 cut(s) 212, 629, 641, 1149, 1418, 1530
BceAI ACGGC 2 cut(s) 207, 1190
BcgI CGANNNNNNTGC 2 cut(s) 98, 132
BciT130I CCWGG 4 cut(s) 94, 417, 1722, 1837
BciVI GTATCC 1 cut(s) 850
BclI TGATCA 2 cut(s) 658, 1080
BcnI CCSGG 2 cut(s) 348, 957
BcoDI GTCTC 3 cut(s) 31, 1479, 1634
BfaI CTAG 2 cut(s) 386, 759
BfmI CTRYAG 2 cut(s) 1293, 1467
BfuAI ACCTGC 1 cut(s) 557
BfuI GTATCC 1 cut(s) 850
BglII AGATCT 1 cut(s) 1251
BisI GCNGC 2 cut(s) 1497, 1601
BlsI GCNGC 2 cut(s) 1498, 1602
Bme1390I CCNGG 6 cut(s) 94, 348, 417, 957, 1722, 1837
Bme18I GGWCC 3 cut(s) 72, 265, 547
BmgT120I GGNCC 4 cut(s) 72, 265, 547, 1440
BmiI GGNNCC 5 cut(s) 267, 549, 597, 1441, 1656
BmrFI CCNGG 6 cut(s) 94, 348, 417, 957, 1722, 1837
BmsI GCATC 8 cut(s) 106, 571, 745, 1014, 1321, 1399, 1503, 1679
BpmI CTGGAG 2 cut(s) 1658, 1757
Bpu10I CCTNAGC 1 cut(s) 774
BpuEI CTTGAG 2 cut(s) 50, 600
BpuMI CCSGG 2 cut(s) 348, 957
Bsa29I ATCGAT 1 cut(s) 114
BsaBI GATNNNNATC 1 cut(s) 861
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 5 cut(s) 92, 93, 132, 223, 1665
BsaWI WCCGGW 1 cut(s) 1509
BsaXI ACNNNNNCTCC 2 cut(s) 291, 321
Bsc4I CCNNNNNNNGG 5 cut(s) 133, 368, 566, 956, 1243
Bse118I RCCGGY 2 cut(s) 361, 1221
Bse1I ACTGG 4 cut(s) 718, 1204, 1280, 1641
Bse3DI GCAATG 2 cut(s) 432, 917
Bse8I GATNNNNATC 1 cut(s) 861
BseBI CCWGG 4 cut(s) 94, 417, 1722, 1837
BseCI ATCGAT 1 cut(s) 114
BseDI CCNNGG 5 cut(s) 92, 93, 132, 223, 1665
BseGI GGATG 7 cut(s) 586, 862, 886, 1141, 1336, 1414, 1518
BseJI GATNNNNATC 1 cut(s) 861
BseLI CCNNNNNNNGG 5 cut(s) 133, 368, 566, 956, 1243
BseMI GCAATG 2 cut(s) 432, 917
BseMII CTCAG 3 cut(s) 765, 867, 1239
BseNI ACTGG 4 cut(s) 718, 1204, 1280, 1641
BseXI GCAGC 1 cut(s) 1508
BseYI CCCAGC 2 cut(s) 389, 479
BsgI GTGCAG 1 cut(s) 771
Bsh1236I CGCG 2 cut(s) 25, 489
Bsh1285I CGRYCG 2 cut(s) 29, 1226
BshFI GGCC 3 cut(s) 222, 997, 1442
BshVI ATCGAT 1 cut(s) 114
BsiEI CGRYCG 2 cut(s) 29, 1226
BsiHKAI GWGCWC 1 cut(s) 1680
BsiSI CCGG 5 cut(s) 348, 362, 957, 1222, 1510
BslFI GGGAC 2 cut(s) 251, 533
BslI CCNNNNNNNGG 5 cut(s) 133, 368, 566, 956, 1243
BsmAI GTCTC 3 cut(s) 31, 1479, 1634
BsmFI GGGAC 2 cut(s) 251, 533
BsnI GGCC 3 cut(s) 222, 997, 1442
Bsp1286I GDGCHC 1 cut(s) 1680
Bsp1407I TGTACA 1 cut(s) 1267
Bsp143I GATC 8 cut(s) 595, 650, 658, 799, 829, 1080, 1251, 1654
BspACI CCGC 4 cut(s) 25, 332, 489, 1600
BspANI GGCC 3 cut(s) 222, 997, 1442
BspCNI CTCAG 3 cut(s) 766, 868, 1240
BspDI ATCGAT 1 cut(s) 114
BspFNI CGCG 2 cut(s) 25, 489
BspLI GGNNCC 5 cut(s) 267, 549, 597, 1441, 1656
BspMI ACCTGC 1 cut(s) 557
BspPI GGATC 5 cut(s) 590, 603, 658, 1649, 1662
BsrDI GCAATG 2 cut(s) 432, 917
BsrFI RCCGGY 2 cut(s) 361, 1221
BsrGI TGTACA 1 cut(s) 1267
BsrI ACTGG 4 cut(s) 718, 1204, 1280, 1641
BssAI RCCGGY 2 cut(s) 361, 1221
BssECI CCNNGG 5 cut(s) 92, 93, 132, 223, 1665
BssMI GATC 8 cut(s) 595, 650, 658, 799, 829, 1080, 1251, 1654
BssNI GRCGYC 1 cut(s) 105
BssT1I CCWWGG 2 cut(s) 132, 1665
Bst2UI CCWGG 4 cut(s) 94, 417, 1722, 1837
Bst4CI ACNGT 9 cut(s) 42, 76, 247, 841, 931, 1136, 1322, 1579, 1708
BstACI GRCGYC 1 cut(s) 105
BstAPI GCANNNNNTGC 1 cut(s) 919
BstAUI TGTACA 1 cut(s) 1267
BstC8I GCNNGC 2 cut(s) 915, 1696
BstDEI CTNAG 3 cut(s) 774, 876, 1248
BstDSI CCRYGG 1 cut(s) 223
BstF5I GGATG 7 cut(s) 586, 862, 886, 1141, 1336, 1414, 1518
BstFNI CGCG 2 cut(s) 25, 489
BstHHI GCGC 2 cut(s) 25, 489
BstKTI GATC 8 cut(s) 598, 653, 661, 802, 832, 1083, 1254, 1657
BstMAI GTCTC 3 cut(s) 31, 1479, 1634
BstMBI GATC 8 cut(s) 595, 650, 658, 799, 829, 1080, 1251, 1654
BstMCI CGRYCG 2 cut(s) 29, 1226
BstMWI GCNNNNNNNGC 8 cut(s) 104, 395, 434, 476, 743, 779, 919, 1331
BstNI CCWGG 4 cut(s) 94, 417, 1722, 1837
BstNSI RCATGY 3 cut(s) 701, 794, 1274
BstSCI CCNGG 6 cut(s) 92, 346, 415, 955, 1720, 1835
BstSFI CTRYAG 2 cut(s) 1293, 1467
BstUI CGCG 2 cut(s) 25, 489
BstV1I GCAGC 1 cut(s) 1508
BstX2I RGATCY 3 cut(s) 595, 1251, 1654
BstXI CCANNNNNNTGG 1 cut(s) 439
BstYI RGATCY 3 cut(s) 595, 1251, 1654
Bsu15I ATCGAT 1 cut(s) 114
BsuI GTATCC 1 cut(s) 850
BsuRI GGCC 3 cut(s) 222, 997, 1442
BsuTUI ATCGAT 1 cut(s) 114
BtgI CCRYGG 1 cut(s) 223
BtsCI GGATG 7 cut(s) 586, 862, 886, 1141, 1336, 1414, 1518
BtsIMutI CAGTG 6 cut(s) 462, 873, 1212, 1327, 1335, 1713
BveI ACCTGC 1 cut(s) 557
Cac8I GCNNGC 2 cut(s) 915, 1696
CaiI CAGNNNCTG 1 cut(s) 40
CfoI GCGC 2 cut(s) 25, 489
Cfr10I RCCGGY 2 cut(s) 361, 1221
Cfr13I GGNCC 4 cut(s) 72, 265, 547, 1440
ClaI ATCGAT 1 cut(s) 114
CseI GACGC 1 cut(s) 113
CsiI ACCWGGT 1 cut(s) 1720
Csp6I GTAC 4 cut(s) 1137, 1268, 1462, 1701
CspCI CAANNNNNGTGG 2 cut(s) 1324, 1359
CviAII CATG 8 cut(s) 289, 399, 698, 791, 952, 980, 1271, 1372
CviQI GTAC 4 cut(s) 1137, 1268, 1462, 1701
DdeI CTNAG 3 cut(s) 774, 876, 1248
DpnI GATC 8 cut(s) 597, 652, 660, 801, 831, 1082, 1253, 1656
DpnII GATC 8 cut(s) 595, 650, 658, 799, 829, 1080, 1251, 1654
DraIII CACNNNGTG 1 cut(s) 1531
EaeI YGGCCR 1 cut(s) 220
EciI GGCGGA 1 cut(s) 347
Ecl136II GAGCTC 1 cut(s) 1678
Eco130I CCWWGG 2 cut(s) 132, 1665
Eco147I AGGCCT 1 cut(s) 997
Eco24I GRGCYC 1 cut(s) 1680
Eco32I GATATC 2 cut(s) 112, 274
Eco47I GGWCC 3 cut(s) 72, 265, 547
Eco53kI GAGCTC 1 cut(s) 1678
Eco57I CTGAAG 7 cut(s) 387, 486, 723, 824, 984, 1056, 1680
EcoICRI GAGCTC 1 cut(s) 1678
EcoO109I RGGNCCY 2 cut(s) 265, 547
EcoRII CCWGG 4 cut(s) 92, 415, 1720, 1835
EcoRV GATATC 2 cut(s) 112, 274
EcoT14I CCWWGG 2 cut(s) 132, 1665
EcoT38I GRGCYC 1 cut(s) 1680
ErhI CCWWGG 2 cut(s) 132, 1665
FaeI CATG 8 cut(s) 292, 402, 701, 794, 955, 983, 1274, 1375
FalI AAGNNNNNCTT 2 cut(s) 721, 753
FaqI GGGAC 2 cut(s) 251, 533
FatI CATG 8 cut(s) 288, 398, 697, 790, 951, 979, 1270, 1371
FauNDI CATATG 1 cut(s) 631
FbaI TGATCA 2 cut(s) 658, 1080
FblI GTMKAC 1 cut(s) 836
Fnu4HI GCNGC 2 cut(s) 1497, 1601
FokI GGATG 7 cut(s) 593, 849, 893, 1128, 1343, 1421, 1525
FriOI GRGCYC 1 cut(s) 1680
Fsp4HI GCNGC 2 cut(s) 1497, 1601
FspBI CTAG 2 cut(s) 386, 759
GlaI GCGC 2 cut(s) 24, 488
GluI GCNGC 2 cut(s) 1497, 1601
GsaI CCCAGC 2 cut(s) 393, 483
GsuI CTGGAG 2 cut(s) 1658, 1757
HaeIII GGCC 3 cut(s) 222, 997, 1442
HapII CCGG 5 cut(s) 348, 362, 957, 1222, 1510
HgaI GACGC 1 cut(s) 113
HhaI GCGC 2 cut(s) 25, 489
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 8 cut(s) 292, 402, 701, 794, 955, 983, 1274, 1375
Hin6I GCGC 2 cut(s) 23, 487
HinP1I GCGC 2 cut(s) 23, 487
HincII GTYRAC 2 cut(s) 837, 1132
HindII GTYRAC 2 cut(s) 837, 1132
HinfI GANTC 8 cut(s) 168, 536, 626, 821, 1112, 1547, 1768, 1800
HpaI GTTAAC 1 cut(s) 1132
HpaII CCGG 5 cut(s) 348, 362, 957, 1222, 1510
HphI GGTGA 1 cut(s) 533
Hpy166II GTNNAC 6 cut(s) 374, 837, 886, 1132, 1268, 1507
Hpy188I TCNGA 7 cut(s) 80, 103, 625, 724, 804, 1085, 1675
Hpy8I GTNNAC 6 cut(s) 374, 837, 886, 1132, 1268, 1507
Hpy99I CGWCG 3 cut(s) 107, 830, 1556
HpyCH4III ACNGT 9 cut(s) 42, 76, 247, 841, 931, 1136, 1322, 1579, 1708
HpyF10VI GCNNNNNNNGC 8 cut(s) 104, 395, 434, 476, 743, 779, 919, 1331
HpyF3I CTNAG 3 cut(s) 774, 876, 1248
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 8 cut(s) 292, 402, 701, 794, 955, 983, 1274, 1375
HspAI GCGC 2 cut(s) 23, 487
Ksp22I TGATCA 2 cut(s) 658, 1080
KspAI GTTAAC 1 cut(s) 1132
Kzo9I GATC 8 cut(s) 595, 650, 658, 799, 829, 1080, 1251, 1654
LmnI GCTCC 4 cut(s) 433, 1312, 1493, 1683
Lsp1109I GCAGC 1 cut(s) 1508
LweI GCATC 8 cut(s) 106, 571, 745, 1014, 1321, 1399, 1503, 1679
MabI ACCWGGT 1 cut(s) 1720
MaeI CTAG 2 cut(s) 386, 759
MaeIII GTNAC 4 cut(s) 521, 1053, 1210, 1531
MalI GATC 8 cut(s) 597, 652, 660, 801, 831, 1082, 1253, 1656
MboI GATC 8 cut(s) 595, 650, 658, 799, 829, 1080, 1251, 1654
MboII GAAGA 4 cut(s) 70, 1062, 1106, 1196
MflI RGATCY 3 cut(s) 595, 1251, 1654
MhlI GDGCHC 1 cut(s) 1680
MluCI AATT 2 cut(s) 504, 1040
MlyI GAGTC 3 cut(s) 177, 1121, 1541
MmeI TCCRAC 1 cut(s) 126
MseI TTAA 9 cut(s) 144, 408, 473, 500, 675, 933, 1131, 1194, 1377
MslI CAYNNNNRTG 4 cut(s) 437, 516, 702, 795
MspI CCGG 5 cut(s) 348, 362, 957, 1222, 1510
MspR9I CCNGG 6 cut(s) 94, 348, 417, 957, 1722, 1837
MvaI CCWGG 4 cut(s) 94, 417, 1722, 1837
MvnI CGCG 2 cut(s) 25, 489
MwoI GCNNNNNNNGC 8 cut(s) 104, 395, 434, 476, 743, 779, 919, 1331
NciI CCSGG 2 cut(s) 348, 957
NdeI CATATG 1 cut(s) 631
NdeII GATC 8 cut(s) 595, 650, 658, 799, 829, 1080, 1251, 1654
NlaIII CATG 8 cut(s) 292, 402, 701, 794, 955, 983, 1274, 1375
NlaIV GGNNCC 5 cut(s) 267, 549, 597, 1441, 1656
NmuCI GTSAC 3 cut(s) 521, 1210, 1531
NspI RCATGY 3 cut(s) 701, 794, 1274
PasI CCCWGGG 1 cut(s) 93
PceI AGGCCT 1 cut(s) 997
PciI ACATGT 3 cut(s) 697, 790, 1270
PcsI WCGNNNNNNNCGW 1 cut(s) 111
PfeI GAWTC 5 cut(s) 536, 626, 821, 1768, 1800
PflFI GACNNNGTC 1 cut(s) 1550
PfoI TCCNGGA 1 cut(s) 415
PkrI GCNGC 2 cut(s) 1498, 1602
PleI GAGTC 3 cut(s) 176, 1120, 1541
PpsI GAGTC 3 cut(s) 176, 1120, 1541
PpuMI RGGWCCY 2 cut(s) 265, 547
PscI ACATGT 3 cut(s) 697, 790, 1270
PshBI ATTAAT 1 cut(s) 675
Psp124BI GAGCTC 1 cut(s) 1680
Psp5II RGGWCCY 2 cut(s) 265, 547
Psp6I CCWGG 4 cut(s) 92, 415, 1720, 1835
PspFI CCCAGC 2 cut(s) 389, 479
PspGI CCWGG 4 cut(s) 92, 415, 1720, 1835
PspN4I GGNNCC 5 cut(s) 267, 549, 597, 1441, 1656
PspPI GGNCC 4 cut(s) 72, 265, 547, 1440
PspPPI RGGWCCY 2 cut(s) 265, 547
PstNI CAGNNNCTG 1 cut(s) 40
PsuI RGATCY 3 cut(s) 595, 1251, 1654
PsyI GACNNNGTC 1 cut(s) 1550
RsaI GTAC 4 cut(s) 1138, 1269, 1463, 1702
RsaNI GTAC 4 cut(s) 1137, 1268, 1462, 1701
RseI CAYNNNNRTG 4 cut(s) 437, 516, 702, 795
SacI GAGCTC 1 cut(s) 1680
SalI GTCGAC 1 cut(s) 835
SaqAI TTAA 9 cut(s) 144, 408, 473, 500, 675, 933, 1131, 1194, 1377
SatI GCNGC 2 cut(s) 1497, 1601
Sau3AI GATC 8 cut(s) 595, 650, 658, 799, 829, 1080, 1251, 1654
Sau96I GGNCC 4 cut(s) 72, 265, 547, 1440
SchI GAGTC 3 cut(s) 177, 1121, 1541
ScrFI CCNGG 6 cut(s) 94, 348, 417, 957, 1722, 1837
SduI GDGCHC 1 cut(s) 1680
SexAI ACCWGGT 1 cut(s) 1720
SfaNI GCATC 8 cut(s) 106, 571, 745, 1014, 1321, 1399, 1503, 1679
SfcI CTRYAG 2 cut(s) 1293, 1467
SinI GGWCC 3 cut(s) 72, 265, 547
SmiMI CAYNNNNRTG 4 cut(s) 437, 516, 702, 795
SmlI CTYRAG 2 cut(s) 65, 615
SmoI CTYRAG 2 cut(s) 65, 615
Sse9I AATT 2 cut(s) 504, 1040
SseBI AGGCCT 1 cut(s) 997
SsiI CCGC 4 cut(s) 25, 332, 489, 1600
SspMI CTAG 2 cut(s) 386, 759
SstI GAGCTC 1 cut(s) 1680
StuI AGGCCT 1 cut(s) 997
StyD4I CCNGG 6 cut(s) 92, 346, 415, 955, 1720, 1835
StyI CCWWGG 2 cut(s) 132, 1665
TaaI ACNGT 9 cut(s) 42, 76, 247, 841, 931, 1136, 1322, 1579, 1708
TaqI TCGA 7 cut(s) 114, 166, 210, 313, 828, 836, 1046
TaqII GACCGA 1 cut(s) 1216
TasI AATT 2 cut(s) 504, 1040
TatI WGTACW 2 cut(s) 1267, 1700
TauI GCSGC 1 cut(s) 1603
TfiI GAWTC 5 cut(s) 536, 626, 821, 1768, 1800
Tru1I TTAA 9 cut(s) 144, 408, 473, 500, 675, 933, 1131, 1194, 1377
Tru9I TTAA 9 cut(s) 144, 408, 473, 500, 675, 933, 1131, 1194, 1377
TscAI CASTG 6 cut(s) 469, 880, 1219, 1327, 1342, 1713
TseFI GTSAC 3 cut(s) 521, 1210, 1531
TseI GCWGC 1 cut(s) 1496
Tsp45I GTSAC 3 cut(s) 521, 1210, 1531
TspDTI ATGAA 2 cut(s) 277, 618
TspGWI ACGGA 2 cut(s) 814, 1540
TspRI CASTG 6 cut(s) 469, 880, 1219, 1327, 1342, 1713
Tth111I GACNNNGTC 1 cut(s) 1550
VpaK11BI GGWCC 3 cut(s) 72, 265, 547
VspI ATTAAT 1 cut(s) 675
XceI RCATGY 3 cut(s) 701, 794, 1274
XcmI CCANNNNNNNNNTGG 2 cut(s) 880, 1402
XmiI GTMKAC 1 cut(s) 836
XspI CTAG 2 cut(s) 386, 759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.