Rw6G000560

eukaryotic translation initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000686
Physical Location & Seq
Reverse (-)
953031 .. 970606
17576 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G000560.1

Sequence Viewer

Length: 1752 bp
ATGTTCAAGAAGGGAGTGGAAGCTCGGTCGCACCAGAGGCTGTCAGGGGCTGACAGGAAGAAGCTCAAGAGGACCGTCAAGGAAAGATTTCCCAGAGCTTCCGACGCCGATATCGATGCTTTACTCCCTCCCAAGGAAAAAGTATCGGTCGGTCACCCAGCTTGGTTTGAGGTTTTAGGAACGGACGACCGAGGGAAAAGTGAAGACGATTCAACCACAAGTCTCTCGGCTCTCATTTCGGCCGAGACGATTTTGAGGCAAACAGTTTCTCGATATGTTATTGGAGGGGCAGATTTGATGTTTCCCGGTATCAGCATACCTGCTGAAGGTTTACCATCGTTTATGGCTGGGGAAGCATGGGCGGTTAAAGTTCCAGGAAATCCAGCTTCCATTGCTGTGGGAACTACTACTATGAGTTGCACTGAAGCATTAAAAGCTGGATTGCGTGGAAAAGCCTTAAAAATTGCTCACTATTATGGTGACTTACTTTGGGAATCAGTTGAGGGCCCTTATGTGCCAAATGCAGGTTTCTTAGAAGATGCTGTTTTTGAGGATCCTACCTTGTCATCAGCTCAAATTTCTGATTCATATAATGGTGCAAATGATGGATCACATGATCAACTGAATGGCATTGATGATAAGGAAATGGGGCAACATGTTGATGTTGCTGATGTGCAGTCTGAACCAAGTTCTGCTTCGGTTGCACCAATTGATGTTAGGAATGAGATTGCTGAGGAAGTAACTGCAAATGTAGGTGATCTGAAGCTAACAGATGATGATTCTGCTAATCAGTCGACTGGGGAGGATCAACATCCTCTTTTGGCCGAGGATGTGGACATGCTTTTGGAAAAATGCCTTTTGCAAGCATTGCATACAACTGTCAAAGACAAAGACCTTCCCATGCCCGGAAGCACTCTATGGTCAAACTATGTTTTACCTTGTAGGCCTTCAGGCATCACACTAGACATCAAGAAATCATCACACAAGAAATTATCAAAGTGGTTACAAGCTAAATGTTCTACAGGATTGATTAGAGTGAAGGAAGATAAATACAAGAAGGAGTCTGTATTACTTTCTATTGACCGCAGCCATCCAGATTACTCATCTTTCATGCCAGAGAAACGACAAGTTGAAGAAGCTGTTCAAACTGGTGTTCCTGCTGTCAATGAAAGTCGGTCGGTCAAAATCCTTGAAGTGGCTGAGATCTATAAAGCAAGTGTACATGTAAATCCAGTTTTTGCTTCCGTAGGTGCTGACACAGGCGAGCTTTACAGTGCTTTTGATGCCACTGACATTGTGTTTAAATATGTTGAAAAGGAAAACCTGGTTAAGCCGACTGATAAATCCATTGTGATTTTGGATGCGATATTGTGTGATGCACTGTTCAAGGGGGCCATAAAGAAAAGTTCAACGTTCCCTACAGAAATTCATAAAAGAGACTTAGGAGCAGCGTTTGTGAACCGGATGCAAGCCCATCACATTGTGACAAGGGGAAATGACTCGGTGGTTCGTAAAGGTGGTTTGAAAACAGTCCAGATAATGACAGAAAGGCGGCAAGTGGATCCTGAAGCTTTGGCATCAGAGCTGCAAAAGAAGTTTGCTTGTAGTACAACGGTGGCAGAACTACCAGGTAAGAAGGGGCTGGATGTTCTGGTTCAAGGTGGAGTGATTGAGAATCTGGCAAAACACCTGATTGAACAATGTGGGATCCCAAAGAGATACATTGAAGTTCTTGACAAAACCAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SUI1

Protein Analysis

583

Amino Acids

63.58

Weight (kDa)

5.79

Isoelectric Point (pI)

39.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pre-PUA PF17832 2 - 50 2e-06 Pre-PUA-like domain
PUA_elF2D PF26292 87 - 161 5.7e-21 elF2D, PUA domain
WHD_eIF2D PF25304 279 - 357 1.1e-28 eIF2D winged helix domain
SWIB_eIF2D PF26291 403 - 463 1.5e-11 eIF2D, SWIB domain
SUI1 PF01253 508 - 571 1.8e-11 Translation initiation factor SUI1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000686)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G71350
fragaria_vesca FvH4_2g00430 FvH4_2g00430 FvH4_2g00430 FvH4_2g00430
malus_domestica MD10G1002600.v1.1
prunus_persica Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0249251 RchiOBHm_Chr6g0249261 RchiOBHm_Chr6g0249701 RchiOBHm_Chr6g0249761 RchiOBHm_Chr6g0249851 RchiOBHm_Chr6g0249861 RchiOBHm_Chr6g0249871 RchiOBHm_Chr6g0249891 RchiOBHm_Chr6g0249901 RchiOBHm_Chr6g0249911 RchiOBHm_Chr6g0249981 RchiOBHm_Chr6g0249991 RchiOBHm_Chr6g0250001 RchiOBHm_Chr6g0250151 RchiOBHm_Chr6g0250171 RchiOBHm_Chr6g0250191 RchiOBHm_Chr6g0250211 RchiOBHm_Chr6g0250221 RchiOBHm_Chr6g0250321 RchiOBHm_Chr6g0250391
rosa_laevigata RLG00000015543 RLG00000015548
rosa_multiflora Rmu_sc0000411.1_g000004 Rmu_sc0000411.1_g000009 Rmu_sc0000704.1_g000007 Rmu_sc0000704.1_g000011 Rmu_sc0001209.1_g000038 Rmu_sc0001209.1_g000042 Rmu_sc0001209.1_g000048 Rmu_sc0003293.1_g000005 Rmu_sc0004691.1_g000005 Rmu_sc0004691.1_g000007 Rmu_sc0004691.1_g000009 Rmu_sc0006032.1_g000001 Rmu_sc0006032.1_g000004 Rmu_sc0006032.1_g000005 Rmu_sc0008209.1_g000003 Rmu_sc0008209.1_g000010 Rmu_sc0009002.1_g000001 Rmu_sc0009002.1_g000005 Rmu_sc0009002.1_g000009
rosa_roxburghii Rroxscaffold_3G00218110 Rroxscaffold_7G00217270 Rroxscaffold_7G00217290 Rroxscaffold_7G00217300 Rroxscaffold_7G00217340
rosa_rugosa Rorug05G0494700 Rorug05G0495000 Rorug05G0496000 Rorug05G0498100 Rorug05G0498200
rosa_samantha Rh6AG000200 Rh6AG000300 Rh6AG004700 Rh6AG004800 Rh6AG005200 Rh6AG005300 Rh6AG005600 Rh6BG005500 Rh6BG005600 Rh6CG003700 Rh6DG003600
rosa_wichuraiana Rw6G000560 Rw6G000600 Rw6G000620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 328, 515
AccI GTMKAC 1 cut(s) 794
AciI CCGC 3 cut(s) 362, 1084, 1552
AclI AACGTT 1 cut(s) 1412
AclWI GGATC 8 cut(s) 548, 561, 616, 813, 1556, 1569, 1702, 1715
AcoI YGGCCR 2 cut(s) 240, 822
AcsI RAATTY 2 cut(s) 576, 1425
AcuI CTGAAG 5 cut(s) 345, 444, 782, 933, 1587
AcyI GRCGYC 1 cut(s) 105
AdeI CACNNNGTG 1 cut(s) 1483
AfaI GTAC 2 cut(s) 1221, 1609
AfiI CCNNNNNNNGG 5 cut(s) 133, 326, 524, 905, 1195
AflIII ACRYGT 2 cut(s) 655, 1222
AjnI CCWGG 4 cut(s) 373, 1323, 1627, 1742
AjuI GAANNNNNNNTTGG 2 cut(s) 679, 711
Alw26I GTCTC 3 cut(s) 227, 239, 1431
AlwI GGATC 8 cut(s) 548, 561, 616, 813, 1556, 1569, 1702, 1715
AlwNI CAGNNNCTG 2 cut(s) 40, 50
AoxI GGCC 5 cut(s) 240, 505, 822, 944, 1392
ApaI GGGCCC 1 cut(s) 509
ApeKI GCWGC 3 cut(s) 1086, 1448, 1585
ApoI RAATTY 2 cut(s) 576, 1425
Asp700I GAANNNNTTC 2 cut(s) 87, 1140
AspS9I GGNCC 4 cut(s) 72, 505, 506, 1392
AsuC2I CCSGG 2 cut(s) 306, 906
AsuHPI GGTGA 3 cut(s) 146, 491, 767
AvaII GGWCC 1 cut(s) 72
BaeGI GKGCMC 1 cut(s) 509
BamHI GGATCC 3 cut(s) 553, 1561, 1707
BanII GRGCYC 1 cut(s) 509
BbsI GAAGAC 1 cut(s) 210
BbvCI CCTCAGC 1 cut(s) 732
BbvI GCAGC 3 cut(s) 1098, 1460, 1572
BccI CCATC 4 cut(s) 343, 599, 1098, 1482
BcgI CGANNNNNNTGC 2 cut(s) 98, 132
BciT130I CCWGG 4 cut(s) 375, 1325, 1629, 1744
BclI TGATCA 1 cut(s) 616
BcnI CCSGG 2 cut(s) 306, 906
BcoDI GTCTC 3 cut(s) 227, 239, 1431
BfaI CTAG 1 cut(s) 962
BfmI CTRYAG 2 cut(s) 1020, 1419
BfuAI ACCTGC 2 cut(s) 328, 515
BglII AGATCT 1 cut(s) 1203
BisI GCNGC 4 cut(s) 1087, 1449, 1553, 1586
BlsI GCNGC 4 cut(s) 1088, 1450, 1554, 1587
Bme1390I CCNGG 6 cut(s) 306, 375, 906, 1325, 1629, 1744
Bme18I GGWCC 1 cut(s) 72
BmgT120I GGNCC 4 cut(s) 72, 505, 506, 1392
BmiI GGNNCC 5 cut(s) 507, 555, 1393, 1563, 1709
BmrFI CCNGG 6 cut(s) 306, 375, 906, 1325, 1629, 1744
BmrI ACTGGG 1 cut(s) 807
BmsI GCATC 8 cut(s) 106, 529, 963, 1273, 1351, 1366, 1455, 1586
BmuI ACTGGG 1 cut(s) 807
BpiI GAAGAC 1 cut(s) 210
Bpu10I CCTNAGC 1 cut(s) 732
BpuEI CTTGAG 1 cut(s) 50
BpuMI CCSGG 2 cut(s) 306, 906
Bsa29I ATCGAT 1 cut(s) 114
BsaBI GATNNNNATC 1 cut(s) 810
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 3 cut(s) 132, 190, 825
BsaWI WCCGGW 1 cut(s) 1461
Bsc4I CCNNNNNNNGG 5 cut(s) 133, 326, 524, 905, 1195
Bse1I ACTGG 3 cut(s) 802, 1153, 1232
Bse3DI GCAATG 2 cut(s) 390, 866
Bse8I GATNNNNATC 1 cut(s) 810
BseBI CCWGG 4 cut(s) 375, 1325, 1629, 1744
BseCI ATCGAT 1 cut(s) 114
BseDI CCNNGG 3 cut(s) 132, 190, 825
BseGI GGATG 6 cut(s) 811, 835, 1090, 1366, 1470, 1651
BseJI GATNNNNATC 1 cut(s) 810
BseLI CCNNNNNNNGG 5 cut(s) 133, 326, 524, 905, 1195
BseMI GCAATG 2 cut(s) 390, 866
BseMII CTCAG 2 cut(s) 723, 1191
BseNI ACTGG 3 cut(s) 802, 1153, 1232
BseSI GKGCMC 1 cut(s) 509
BseX3I CGGCCG 1 cut(s) 240
BseXI GCAGC 3 cut(s) 1098, 1460, 1572
BseYI CCCAGC 2 cut(s) 157, 347
BsgI GTGCAG 1 cut(s) 695
Bsh1285I CGRYCG 5 cut(s) 29, 150, 190, 243, 1178
BshFI GGCC 5 cut(s) 242, 507, 824, 946, 1394
BshVI ATCGAT 1 cut(s) 114
BsiEI CGRYCG 5 cut(s) 29, 150, 190, 243, 1178
BsiSI CCGG 3 cut(s) 306, 906, 1462
BslI CCNNNNNNNGG 5 cut(s) 133, 326, 524, 905, 1195
BsmAI GTCTC 3 cut(s) 227, 239, 1431
BsmBI CGTCTC 1 cut(s) 239
BsnI GGCC 5 cut(s) 242, 507, 824, 946, 1394
Bsp120I GGGCCC 1 cut(s) 505
Bsp1286I GDGCHC 1 cut(s) 509
Bsp1407I TGTACA 1 cut(s) 1219
Bsp143I GATC 8 cut(s) 553, 608, 616, 757, 805, 1203, 1561, 1707
BspACI CCGC 3 cut(s) 362, 1084, 1552
BspANI GGCC 5 cut(s) 242, 507, 824, 946, 1394
BspCNI CTCAG 2 cut(s) 724, 1192
BspDI ATCGAT 1 cut(s) 114
BspLI GGNNCC 5 cut(s) 507, 555, 1393, 1563, 1709
BspMI ACCTGC 2 cut(s) 328, 515
BspPI GGATC 8 cut(s) 548, 561, 616, 813, 1556, 1569, 1702, 1715
BsrDI GCAATG 2 cut(s) 390, 866
BsrGI TGTACA 1 cut(s) 1219
BsrI ACTGG 3 cut(s) 802, 1153, 1232
BssECI CCNNGG 3 cut(s) 132, 190, 825
BssMI GATC 8 cut(s) 553, 608, 616, 757, 805, 1203, 1561, 1707
BssNI GRCGYC 1 cut(s) 105
BssT1I CCWWGG 1 cut(s) 132
Bst2UI CCWGG 4 cut(s) 375, 1325, 1629, 1744
Bst4CI ACNGT 7 cut(s) 76, 265, 880, 1274, 1383, 1531, 1615
BstACI GRCGYC 1 cut(s) 105
BstAPI GCANNNNNTGC 1 cut(s) 868
BstAUI TGTACA 1 cut(s) 1219
BstC8I GCNNGC 3 cut(s) 864, 1265, 1470
BstDEI CTNAG 4 cut(s) 532, 732, 1200, 1441
BstEII GGTNACC 1 cut(s) 152
BstENI CCTNNNNNAGG 1 cut(s) 324
BstF5I GGATG 6 cut(s) 811, 835, 1090, 1366, 1470, 1651
BstKTI GATC 8 cut(s) 556, 611, 619, 760, 808, 1206, 1564, 1710
BstMAI GTCTC 3 cut(s) 227, 239, 1431
BstMBI GATC 8 cut(s) 553, 608, 616, 757, 805, 1203, 1561, 1707
BstMCI CGRYCG 5 cut(s) 29, 150, 190, 243, 1178
BstMWI GCNNNNNNNGC 8 cut(s) 37, 104, 353, 392, 434, 701, 868, 1283
BstNI CCWGG 4 cut(s) 375, 1325, 1629, 1744
BstNSI RCATGY 3 cut(s) 659, 841, 1226
BstPI GGTNACC 1 cut(s) 152
BstSCI CCNGG 6 cut(s) 304, 373, 904, 1323, 1627, 1742
BstSFI CTRYAG 2 cut(s) 1020, 1419
BstSLI GKGCMC 1 cut(s) 509
BstV1I GCAGC 3 cut(s) 1098, 1460, 1572
BstV2I GAAGAC 1 cut(s) 210
BstX2I RGATCY 4 cut(s) 553, 1203, 1561, 1707
BstXI CCANNNNNNTGG 1 cut(s) 397
BstYI RGATCY 4 cut(s) 553, 1203, 1561, 1707
BstZI CGGCCG 1 cut(s) 240
Bsu15I ATCGAT 1 cut(s) 114
BsuRI GGCC 5 cut(s) 242, 507, 824, 946, 1394
BsuTUI ATCGAT 1 cut(s) 114
BtsCI GGATG 6 cut(s) 811, 835, 1090, 1366, 1470, 1651
BtsIMutI CAGTG 4 cut(s) 420, 1279, 1287, 1379
BveI ACCTGC 2 cut(s) 328, 515
Cac8I GCNNGC 3 cut(s) 864, 1265, 1470
CaiI CAGNNNCTG 2 cut(s) 40, 50
Cfr13I GGNCC 4 cut(s) 72, 505, 506, 1392
ClaI ATCGAT 1 cut(s) 114
CseI GACGC 1 cut(s) 113
CsiI ACCWGGT 2 cut(s) 1323, 1627
Csp6I GTAC 2 cut(s) 1220, 1608
CspCI CAANNNNNGTGG 2 cut(s) 1276, 1311
CviAII CATG 7 cut(s) 357, 614, 656, 838, 901, 1111, 1223
CviQI GTAC 2 cut(s) 1220, 1608
DdeI CTNAG 4 cut(s) 532, 732, 1200, 1441
DpnI GATC 8 cut(s) 555, 610, 618, 759, 807, 1205, 1563, 1709
DpnII GATC 8 cut(s) 553, 608, 616, 757, 805, 1203, 1561, 1707
DraI TTTAAA 1 cut(s) 1303
DraIII CACNNNGTG 1 cut(s) 1483
EaeI YGGCCR 2 cut(s) 240, 822
EagI CGGCCG 1 cut(s) 240
EclXI CGGCCG 1 cut(s) 240
Eco130I CCWWGG 1 cut(s) 132
Eco147I AGGCCT 1 cut(s) 946
Eco24I GRGCYC 1 cut(s) 509
Eco32I GATATC 1 cut(s) 112
Eco47I GGWCC 1 cut(s) 72
Eco52I CGGCCG 1 cut(s) 240
Eco57I CTGAAG 5 cut(s) 345, 444, 782, 933, 1587
Eco91I GGTNACC 1 cut(s) 152
EcoNI CCTNNNNNAGG 1 cut(s) 324
EcoO109I RGGNCCY 2 cut(s) 505, 506
EcoO65I GGTNACC 1 cut(s) 152
EcoRII CCWGG 4 cut(s) 373, 1323, 1627, 1742
EcoRV GATATC 1 cut(s) 112
EcoT14I CCWWGG 1 cut(s) 132
EcoT38I GRGCYC 1 cut(s) 509
ErhI CCWWGG 1 cut(s) 132
Esp3I CGTCTC 1 cut(s) 239
FaeI CATG 7 cut(s) 360, 617, 659, 841, 904, 1114, 1226
FalI AAGNNNNNCTT 2 cut(s) 679, 711
FatI CATG 7 cut(s) 356, 613, 655, 837, 900, 1110, 1222
FbaI TGATCA 1 cut(s) 616
FblI GTMKAC 1 cut(s) 794
Fnu4HI GCNGC 4 cut(s) 1087, 1449, 1553, 1586
FokI GGATG 6 cut(s) 798, 842, 1077, 1373, 1477, 1658
FriOI GRGCYC 1 cut(s) 509
Fsp4HI GCNGC 4 cut(s) 1087, 1449, 1553, 1586
FspBI CTAG 1 cut(s) 962
GluI GCNGC 4 cut(s) 1087, 1449, 1553, 1586
GsaI CCCAGC 2 cut(s) 161, 351
HaeIII GGCC 5 cut(s) 242, 507, 824, 946, 1394
HapII CCGG 3 cut(s) 306, 906, 1462
HgaI GACGC 1 cut(s) 113
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 7 cut(s) 360, 617, 659, 841, 904, 1114, 1226
HincII GTYRAC 1 cut(s) 795
HindII GTYRAC 1 cut(s) 795
HindIII AAGCTT 1 cut(s) 1569
HinfI GANTC 7 cut(s) 209, 494, 584, 779, 1061, 1499, 1675
HpaII CCGG 3 cut(s) 306, 906, 1462
HphI GGTGA 3 cut(s) 146, 491, 767
Hpy166II GTNNAC 5 cut(s) 332, 795, 835, 1220, 1459
Hpy188I TCNGA 5 cut(s) 103, 583, 682, 762, 1582
Hpy188III TCNNGA 8 cut(s) 7, 67, 270, 970, 1094, 1534, 1565, 1733
Hpy8I GTNNAC 5 cut(s) 332, 795, 835, 1220, 1459
Hpy99I CGWCG 1 cut(s) 107
HpyAV CCTTC 7 cut(s) 4, 320, 905, 957, 1033, 1051, 1630
HpyCH4III ACNGT 7 cut(s) 76, 265, 880, 1274, 1383, 1531, 1615
HpyCH4IV ACGT 1 cut(s) 1412
HpyF10VI GCNNNNNNNGC 8 cut(s) 37, 104, 353, 392, 434, 701, 868, 1283
HpyF3I CTNAG 4 cut(s) 532, 732, 1200, 1441
HpySE526I ACGT 1 cut(s) 1412
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 7 cut(s) 360, 617, 659, 841, 904, 1114, 1226
Ksp22I TGATCA 1 cut(s) 616
Kzo9I GATC 8 cut(s) 553, 608, 616, 757, 805, 1203, 1561, 1707
LmnI GCTCC 1 cut(s) 1445
Lsp1109I GCAGC 3 cut(s) 1098, 1460, 1572
LweI GCATC 8 cut(s) 106, 529, 963, 1273, 1351, 1366, 1455, 1586
MabI ACCWGGT 2 cut(s) 1323, 1627
MaeI CTAG 1 cut(s) 962
MaeII ACGT 1 cut(s) 1412
MaeIII GTNAC 5 cut(s) 152, 479, 739, 1002, 1483
MalI GATC 8 cut(s) 555, 610, 618, 759, 807, 1205, 1563, 1709
MboI GATC 8 cut(s) 553, 608, 616, 757, 805, 1203, 1561, 1707
MboII GAAGA 5 cut(s) 70, 215, 548, 1055, 1145
MfeI CAATTG 1 cut(s) 708
MflI RGATCY 4 cut(s) 553, 1203, 1561, 1707
MhlI GDGCHC 1 cut(s) 509
MluCI AATT 5 cut(s) 462, 576, 708, 989, 1425
MlyI GAGTC 2 cut(s) 1070, 1493
MmeI TCCRAC 1 cut(s) 126
MroXI GAANNNNTTC 2 cut(s) 87, 1140
MseI TTAA 5 cut(s) 366, 431, 458, 1302, 1329
MslI CAYNNNNRTG 3 cut(s) 395, 474, 660
MspI CCGG 3 cut(s) 306, 906, 1462
MspR9I CCNGG 6 cut(s) 306, 375, 906, 1325, 1629, 1744
MunI CAATTG 1 cut(s) 708
MvaI CCWGG 4 cut(s) 375, 1325, 1629, 1744
MwoI GCNNNNNNNGC 8 cut(s) 37, 104, 353, 392, 434, 701, 868, 1283
NciI CCSGG 2 cut(s) 306, 906
NdeII GATC 8 cut(s) 553, 608, 616, 757, 805, 1203, 1561, 1707
NlaIII CATG 7 cut(s) 360, 617, 659, 841, 904, 1114, 1226
NlaIV GGNNCC 5 cut(s) 507, 555, 1393, 1563, 1709
NmeAIII GCCGAG 3 cut(s) 206, 268, 850
NmuCI GTSAC 3 cut(s) 152, 479, 1483
NspI RCATGY 3 cut(s) 659, 841, 1226
PceI AGGCCT 1 cut(s) 946
PciI ACATGT 2 cut(s) 655, 1222
PcsI WCGNNNNNNNCGW 2 cut(s) 111, 245
PdmI GAANNNNTTC 2 cut(s) 87, 1140
PfeI GAWTC 5 cut(s) 209, 494, 584, 779, 1675
PfoI TCCNGGA 1 cut(s) 373
PkrI GCNGC 4 cut(s) 1088, 1450, 1554, 1587
PleI GAGTC 2 cut(s) 1069, 1493
PpsI GAGTC 2 cut(s) 1069, 1493
PscI ACATGT 2 cut(s) 655, 1222
Psp1406I AACGTT 1 cut(s) 1412
Psp6I CCWGG 4 cut(s) 373, 1323, 1627, 1742
PspEI GGTNACC 1 cut(s) 152
PspFI CCCAGC 2 cut(s) 157, 347
PspGI CCWGG 4 cut(s) 373, 1323, 1627, 1742
PspN4I GGNNCC 5 cut(s) 507, 555, 1393, 1563, 1709
PspOMI GGGCCC 1 cut(s) 505
PspPI GGNCC 4 cut(s) 72, 505, 506, 1392
PstNI CAGNNNCTG 2 cut(s) 40, 50
PsuI RGATCY 4 cut(s) 553, 1203, 1561, 1707
RsaI GTAC 2 cut(s) 1221, 1609
RsaNI GTAC 2 cut(s) 1220, 1608
RseI CAYNNNNRTG 3 cut(s) 395, 474, 660
SalI GTCGAC 1 cut(s) 793
SaqAI TTAA 5 cut(s) 366, 431, 458, 1302, 1329
SatI GCNGC 4 cut(s) 1087, 1449, 1553, 1586
Sau3AI GATC 8 cut(s) 553, 608, 616, 757, 805, 1203, 1561, 1707
Sau96I GGNCC 4 cut(s) 72, 505, 506, 1392
SchI GAGTC 2 cut(s) 1070, 1493
ScrFI CCNGG 6 cut(s) 306, 375, 906, 1325, 1629, 1744
SduI GDGCHC 1 cut(s) 509
SexAI ACCWGGT 2 cut(s) 1323, 1627
SfaNI GCATC 8 cut(s) 106, 529, 963, 1273, 1351, 1366, 1455, 1586
SfcI CTRYAG 2 cut(s) 1020, 1419
SinI GGWCC 1 cut(s) 72
SmiMI CAYNNNNRTG 3 cut(s) 395, 474, 660
SmlI CTYRAG 1 cut(s) 65
SmoI CTYRAG 1 cut(s) 65
Sse9I AATT 5 cut(s) 462, 576, 708, 989, 1425
SseBI AGGCCT 1 cut(s) 946
SsiI CCGC 3 cut(s) 362, 1084, 1552
SspMI CTAG 1 cut(s) 962
StuI AGGCCT 1 cut(s) 946
StyD4I CCNGG 6 cut(s) 304, 373, 904, 1323, 1627, 1742
StyI CCWWGG 1 cut(s) 132
TaaI ACNGT 7 cut(s) 76, 265, 880, 1274, 1383, 1531, 1615
TaiI ACGT 1 cut(s) 1415
TaqI TCGA 3 cut(s) 114, 271, 794
TaqII GACCGA 6 cut(s) 15, 136, 140, 204, 1164, 1168
TasI AATT 5 cut(s) 462, 576, 708, 989, 1425
TatI WGTACW 2 cut(s) 1219, 1607
TauI GCSGC 1 cut(s) 1555
TfiI GAWTC 5 cut(s) 209, 494, 584, 779, 1675
Tru1I TTAA 5 cut(s) 366, 431, 458, 1302, 1329
Tru9I TTAA 5 cut(s) 366, 431, 458, 1302, 1329
TscAI CASTG 4 cut(s) 427, 1279, 1294, 1386
TseFI GTSAC 3 cut(s) 152, 479, 1483
TseI GCWGC 3 cut(s) 1086, 1448, 1585
Tsp45I GTSAC 3 cut(s) 152, 479, 1483
TspDTI ATGAA 4 cut(s) 576, 1099, 1182, 1418
TspGWI ACGGA 2 cut(s) 197, 1234
TspRI CASTG 4 cut(s) 427, 1279, 1294, 1386
VpaK11BI GGWCC 1 cut(s) 72
XagI CCTNNNNNAGG 1 cut(s) 324
XapI RAATTY 2 cut(s) 576, 1425
XceI RCATGY 3 cut(s) 659, 841, 1226
XcmI CCANNNNNNNNNTGG 1 cut(s) 1354
XmiI GTMKAC 1 cut(s) 794
XmnI GAANNNNTTC 2 cut(s) 87, 1140
XspI CTAG 1 cut(s) 962
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.