Rh6DG003600

eukaryotic translation initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000686
Physical Location & Seq
Reverse (-)
449929 .. 454185
4257 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG003600.1

Sequence Viewer

Length: 1839 bp
ATGTTCAAGAAGGGAGTGGAAGCTCGGTCGCACCAGAGACTGTCAGGGGCTGACAGGAAGAAGCTGAAGAGGACCGTCAAGGAAAGATTTCCCAGAGCTTCCGACGCCGATATCGATGCTTTACTCCCTCCCAAGGTGGAGATAAAGGTTTCAAAGTATCAAAATCGAGTCCTTGTATATGGCATAGAGGGAGGCTTTCCTATGTTTTTTGATATTGATGGGCGTGGCAAAGAAATTTTTCCCACAGTTTATGCCCTCTGGAAGGTCCCTGATCTCTTGCCTTCTTTCATGCTGAAAGGGGGCGAGGTTTCTCGATATGTTATTGGAGGGGCAGATTTGATGTTTCCCGGTATCAGCATACCTGCTGAAGGTTTACCATCGTTTATAGCTGGGGAAGCATGGGCGGTTAAAGTTCCAGGAAATCCAGCTCCCATTGCTGTGGGAACTACTACTATGAGTTGCACTGAAGCATTAAAAGCTGGATTGCGTGGAAAAGCCTTAAAAATTGCTCACTATTATGGTGACTTACTTTGGGAATCAGTTGAGGGCCCTTATGTGCCAAATGCAGGTTTCTTAGAAGATGCTGTTTTTGAGGATCCTACCTTGTCATCAGCTCAAATTTCTGATTCATATAATGGTGCAAATGATGGATCACATGATCAACTGAATGGCATTGATGATAAGGAAATGGGGCAACATGTTGATGTTGCTGATGTGCAGTCTGAACCAAGTTCTGCTTCAGTTGCACCGATTGATGTTAGGAATGAGATTGCTGAGGAAGTAACTGCAAATATAGGTGATCTGAAGCTAACAGATGATGATTCTGCTAATCAGTCGACTGGGGAGGATCAGCATCCTCTTTCTGCTGAGGATGTGGACATGCTTTTGGAAAAATGCCTTTTGCAAGCATTGCATACAACTGTCAAAGACAAAGACCTTCCCATGCCCGGAAGCACTCTATGGTCAAACTATGTTTTACCTTGTAGGCCTTCAGGCATCACACTAGACATCAAGAAATCATCACACAAGAAATTATCAAAGTGGTTACAAGCTAAATGTTCTACAGGATTGATTAGAGTGAAGGAAGATAAATATAAGAAGGAGTCTGTATTACTTTCTATTGACCGCAGCCATCCAGATTACTCGTCTTTCAAGCCAGAGAAACGACAAGTTGAAGAAGCTGTTCAAACTGGTGTTCCTGCTGTCAGTGAAAGTCGGTCGGTCAAAATCCTTGAAGTGGCTGAGATCTATAAACCAAGTGTACATGTAAATCCAGTATTTGCTTCTGTAGGTGCTGACACAGGCGAGCTTTACAGTGCTTCGGATGCCACTGACATTGTGTTTAAATATGTTGAAAAGGAAAACCTGGTTAAGCCGACAGATAAATCCATTGTGATTTTGGATGCGATATTGTGTGATGCACTGTTCAAGGGGGCCATAAAGAAAGGTTCAACGTACCCTACAGAAATTCATAAAAGAGACTTAGAAGCAGCGTTTGTGAACCGGATGCAAGCCCATCACATTGTGACAAGGGGAAATGACTCGGTTGTTCGTAAAGGTGGTTTGAAAACAGTCCAGATAATGACAGAAAGGCGGCAAGGTAATAAGAAGATGACCAAGTTATCAGGACTGGAAACATTTTTAGTGGATCCTGAAGCTTTGGCATCAGAGCTACAAAAGAAGTTCGCTTGTAGTACAACGGTGGCAGAACTACCAGGTAAGAAGGGGCTGGAGGTTCTGGTTCAAGGTGGAGTGATTGAGAATCTGGCAAAACACTTGATTGAACAATATGGGATCCCAAAGAGATACATTGAGGTTCTTGACAAAACCAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SUI1

Protein Analysis

612

Amino Acids

67.12

Weight (kDa)

6.28

Isoelectric Point (pI)

39.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pre-PUA PF17832 2 - 90 1.2e-18 Pre-PUA-like domain
PUA_elF2D PF26292 101 - 175 7.5e-22 elF2D, PUA domain
WHD_eIF2D PF25304 293 - 371 1.2e-28 eIF2D winged helix domain
SWIB_eIF2D PF26291 417 - 477 3.4e-12 eIF2D, SWIB domain
SUI1 PF01253 523 - 600 7.9e-22 Translation initiation factor SUI1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000686)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G71350
fragaria_vesca FvH4_2g00430 FvH4_2g00430 FvH4_2g00430 FvH4_2g00430
malus_domestica MD10G1002600.v1.1
prunus_persica Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0249251 RchiOBHm_Chr6g0249261 RchiOBHm_Chr6g0249701 RchiOBHm_Chr6g0249761 RchiOBHm_Chr6g0249851 RchiOBHm_Chr6g0249861 RchiOBHm_Chr6g0249871 RchiOBHm_Chr6g0249891 RchiOBHm_Chr6g0249901 RchiOBHm_Chr6g0249911 RchiOBHm_Chr6g0249981 RchiOBHm_Chr6g0249991 RchiOBHm_Chr6g0250001 RchiOBHm_Chr6g0250151 RchiOBHm_Chr6g0250171 RchiOBHm_Chr6g0250191 RchiOBHm_Chr6g0250211 RchiOBHm_Chr6g0250221 RchiOBHm_Chr6g0250321 RchiOBHm_Chr6g0250391
rosa_laevigata RLG00000015543 RLG00000015548
rosa_multiflora Rmu_sc0000411.1_g000004 Rmu_sc0000411.1_g000009 Rmu_sc0000704.1_g000007 Rmu_sc0000704.1_g000011 Rmu_sc0001209.1_g000038 Rmu_sc0001209.1_g000042 Rmu_sc0001209.1_g000048 Rmu_sc0003293.1_g000005 Rmu_sc0004691.1_g000005 Rmu_sc0004691.1_g000007 Rmu_sc0004691.1_g000009 Rmu_sc0006032.1_g000001 Rmu_sc0006032.1_g000004 Rmu_sc0006032.1_g000005 Rmu_sc0008209.1_g000003 Rmu_sc0008209.1_g000010 Rmu_sc0009002.1_g000001 Rmu_sc0009002.1_g000005 Rmu_sc0009002.1_g000009
rosa_roxburghii Rroxscaffold_3G00218110 Rroxscaffold_7G00217270 Rroxscaffold_7G00217290 Rroxscaffold_7G00217300 Rroxscaffold_7G00217340
rosa_rugosa Rorug05G0494700 Rorug05G0495000 Rorug05G0496000 Rorug05G0498100 Rorug05G0498200
rosa_samantha Rh6AG000200 Rh6AG000300 Rh6AG004700 Rh6AG004800 Rh6AG005200 Rh6AG005300 Rh6AG005600 Rh6BG005500 Rh6BG005600 Rh6CG003700 Rh6DG003600
rosa_wichuraiana Rw6G000560 Rw6G000600 Rw6G000620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 370, 557
AccI GTMKAC 1 cut(s) 836
AciI CCGC 3 cut(s) 404, 1126, 1594
AclWI GGATC 8 cut(s) 590, 603, 658, 855, 1643, 1656, 1789, 1802
AcsI RAATTY 3 cut(s) 234, 618, 1467
AcuI CTGAAG 7 cut(s) 86, 387, 486, 723, 824, 975, 1674
AcyI GRCGYC 1 cut(s) 105
AdeI CACNNNGTG 1 cut(s) 1525
AfaI GTAC 3 cut(s) 1263, 1457, 1696
AfiI CCNNNNNNNGG 6 cut(s) 133, 262, 368, 566, 947, 1237
AflIII ACRYGT 2 cut(s) 697, 1264
AjnI CCWGG 4 cut(s) 415, 1365, 1714, 1829
AjuI GAANNNNNNNTTGG 2 cut(s) 721, 753
Alw26I GTCTC 2 cut(s) 31, 1473
AlwI GGATC 8 cut(s) 590, 603, 658, 855, 1643, 1656, 1789, 1802
AlwNI CAGNNNCTG 2 cut(s) 40, 50
AoxI GGCC 3 cut(s) 547, 986, 1434
ApaI GGGCCC 1 cut(s) 551
ApeKI GCWGC 2 cut(s) 1128, 1490
ApoI RAATTY 3 cut(s) 234, 618, 1467
Asp700I GAANNNNTTC 3 cut(s) 87, 237, 1182
AspS9I GGNCC 5 cut(s) 72, 265, 547, 548, 1434
AsuC2I CCSGG 2 cut(s) 348, 948
AsuHPI GGTGA 2 cut(s) 533, 809
AvaII GGWCC 2 cut(s) 72, 265
BaeGI GKGCMC 1 cut(s) 551
BamHI GGATCC 3 cut(s) 595, 1648, 1794
BanII GRGCYC 1 cut(s) 551
BbvCI CCTCAGC 2 cut(s) 774, 867
BbvI GCAGC 2 cut(s) 1140, 1502
BccI CCATC 5 cut(s) 212, 385, 641, 1140, 1524
BcgI CGANNNNNNTGC 2 cut(s) 98, 132
BciT130I CCWGG 4 cut(s) 417, 1367, 1716, 1831
BclI TGATCA 1 cut(s) 658
BcnI CCSGG 2 cut(s) 348, 948
BcoDI GTCTC 2 cut(s) 31, 1473
BfaI CTAG 1 cut(s) 1004
BfmI CTRYAG 3 cut(s) 1062, 1287, 1461
BfuAI ACCTGC 2 cut(s) 370, 557
BglII AGATCT 1 cut(s) 1245
BisI GCNGC 3 cut(s) 1129, 1491, 1595
BlsI GCNGC 3 cut(s) 1130, 1492, 1596
Bme1390I CCNGG 6 cut(s) 348, 417, 948, 1367, 1716, 1831
Bme18I GGWCC 2 cut(s) 72, 265
BmgT120I GGNCC 5 cut(s) 72, 265, 547, 548, 1434
BmiI GGNNCC 6 cut(s) 267, 549, 597, 1435, 1650, 1796
BmrFI CCNGG 6 cut(s) 348, 417, 948, 1367, 1716, 1831
BmrI ACTGGG 1 cut(s) 849
BmsI GCATC 9 cut(s) 106, 571, 862, 1005, 1315, 1393, 1408, 1497, 1673
BmuI ACTGGG 1 cut(s) 849
BpmI CTGGAG 1 cut(s) 1751
Bpu10I CCTNAGC 2 cut(s) 774, 867
BpuMI CCSGG 2 cut(s) 348, 948
Bsa29I ATCGAT 1 cut(s) 114
BsaBI GATNNNNATC 1 cut(s) 852
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 1 cut(s) 132
BsaWI WCCGGW 1 cut(s) 1503
Bsc4I CCNNNNNNNGG 6 cut(s) 133, 262, 368, 566, 947, 1237
Bse1I ACTGG 4 cut(s) 844, 1195, 1274, 1635
Bse3DI GCAATG 2 cut(s) 432, 908
Bse8I GATNNNNATC 1 cut(s) 852
BseBI CCWGG 4 cut(s) 417, 1367, 1716, 1831
BseCI ATCGAT 1 cut(s) 114
BseDI CCNNGG 1 cut(s) 132
BseGI GGATG 6 cut(s) 853, 877, 1132, 1330, 1408, 1512
BseJI GATNNNNATC 1 cut(s) 852
BseLI CCNNNNNNNGG 6 cut(s) 133, 262, 368, 566, 947, 1237
BseMI GCAATG 2 cut(s) 432, 908
BseMII CTCAG 3 cut(s) 765, 858, 1233
BseNI ACTGG 4 cut(s) 844, 1195, 1274, 1635
BseSI GKGCMC 1 cut(s) 551
BseXI GCAGC 2 cut(s) 1140, 1502
BseYI CCCAGC 1 cut(s) 389
BsgI GTGCAG 1 cut(s) 737
Bsh1285I CGRYCG 2 cut(s) 29, 1220
BshFI GGCC 3 cut(s) 549, 988, 1436
BshVI ATCGAT 1 cut(s) 114
BsiEI CGRYCG 2 cut(s) 29, 1220
BsiSI CCGG 3 cut(s) 348, 948, 1504
BslFI GGGAC 1 cut(s) 251
BslI CCNNNNNNNGG 6 cut(s) 133, 262, 368, 566, 947, 1237
BsmAI GTCTC 2 cut(s) 31, 1473
BsmFI GGGAC 1 cut(s) 251
BsnI GGCC 3 cut(s) 549, 988, 1436
Bsp120I GGGCCC 1 cut(s) 547
Bsp1286I GDGCHC 1 cut(s) 551
Bsp1407I TGTACA 1 cut(s) 1261
Bsp143I GATC 9 cut(s) 271, 595, 650, 658, 799, 847, 1245, 1648, 1794
BspACI CCGC 3 cut(s) 404, 1126, 1594
BspANI GGCC 3 cut(s) 549, 988, 1436
BspCNI CTCAG 3 cut(s) 766, 859, 1234
BspDI ATCGAT 1 cut(s) 114
BspLI GGNNCC 6 cut(s) 267, 549, 597, 1435, 1650, 1796
BspMI ACCTGC 2 cut(s) 370, 557
BspPI GGATC 8 cut(s) 590, 603, 658, 855, 1643, 1656, 1789, 1802
BsrDI GCAATG 2 cut(s) 432, 908
BsrGI TGTACA 1 cut(s) 1261
BsrI ACTGG 4 cut(s) 844, 1195, 1274, 1635
BssECI CCNNGG 1 cut(s) 132
BssMI GATC 9 cut(s) 271, 595, 650, 658, 799, 847, 1245, 1648, 1794
BssNI GRCGYC 1 cut(s) 105
BssT1I CCWWGG 1 cut(s) 132
Bst2UI CCWGG 4 cut(s) 417, 1367, 1716, 1831
Bst4CI ACNGT 8 cut(s) 42, 76, 247, 922, 1316, 1425, 1573, 1702
Bst6I CTCTTC 1 cut(s) 62
BstACI GRCGYC 1 cut(s) 105
BstAPI GCANNNNNTGC 1 cut(s) 910
BstAUI TGTACA 1 cut(s) 1261
BstC8I GCNNGC 3 cut(s) 906, 1307, 1512
BstDEI CTNAG 5 cut(s) 574, 774, 867, 1242, 1483
BstENI CCTNNNNNAGG 2 cut(s) 260, 366
BstF5I GGATG 6 cut(s) 853, 877, 1132, 1330, 1408, 1512
BstKTI GATC 9 cut(s) 274, 598, 653, 661, 802, 850, 1248, 1651, 1797
BstMAI GTCTC 2 cut(s) 31, 1473
BstMBI GATC 9 cut(s) 271, 595, 650, 658, 799, 847, 1245, 1648, 1794
BstMCI CGRYCG 2 cut(s) 29, 1220
BstMWI GCNNNNNNNGC 7 cut(s) 104, 395, 434, 476, 743, 910, 1325
BstNI CCWGG 4 cut(s) 417, 1367, 1716, 1831
BstNSI RCATGY 3 cut(s) 701, 883, 1268
BstSCI CCNGG 6 cut(s) 346, 415, 946, 1365, 1714, 1829
BstSFI CTRYAG 3 cut(s) 1062, 1287, 1461
BstSLI GKGCMC 1 cut(s) 551
BstV1I GCAGC 2 cut(s) 1140, 1502
BstX2I RGATCY 4 cut(s) 595, 1245, 1648, 1794
BstXI CCANNNNNNTGG 1 cut(s) 439
BstYI RGATCY 4 cut(s) 595, 1245, 1648, 1794
Bsu15I ATCGAT 1 cut(s) 114
BsuRI GGCC 3 cut(s) 549, 988, 1436
BsuTUI ATCGAT 1 cut(s) 114
BtsCI GGATG 6 cut(s) 853, 877, 1132, 1330, 1408, 1512
BtsIMutI CAGTG 5 cut(s) 462, 1213, 1321, 1329, 1421
BveI ACCTGC 2 cut(s) 370, 557
Cac8I GCNNGC 3 cut(s) 906, 1307, 1512
CaiI CAGNNNCTG 2 cut(s) 40, 50
Cfr13I GGNCC 5 cut(s) 72, 265, 547, 548, 1434
ClaI ATCGAT 1 cut(s) 114
CseI GACGC 1 cut(s) 113
CsiI ACCWGGT 2 cut(s) 1365, 1714
Csp6I GTAC 3 cut(s) 1262, 1456, 1695
CspCI CAANNNNNGTGG 2 cut(s) 1318, 1353
CviAII CATG 7 cut(s) 289, 399, 656, 698, 880, 943, 1265
CviQI GTAC 3 cut(s) 1262, 1456, 1695
DdeI CTNAG 5 cut(s) 574, 774, 867, 1242, 1483
DpnI GATC 9 cut(s) 273, 597, 652, 660, 801, 849, 1247, 1650, 1796
DpnII GATC 9 cut(s) 271, 595, 650, 658, 799, 847, 1245, 1648, 1794
DraI TTTAAA 1 cut(s) 1345
DraIII CACNNNGTG 1 cut(s) 1525
Eam1104I CTCTTC 1 cut(s) 62
EarI CTCTTC 1 cut(s) 62
Eco130I CCWWGG 1 cut(s) 132
Eco147I AGGCCT 1 cut(s) 988
Eco24I GRGCYC 1 cut(s) 551
Eco32I GATATC 1 cut(s) 112
Eco47I GGWCC 2 cut(s) 72, 265
Eco57I CTGAAG 7 cut(s) 86, 387, 486, 723, 824, 975, 1674
EcoNI CCTNNNNNAGG 2 cut(s) 260, 366
EcoO109I RGGNCCY 3 cut(s) 265, 547, 548
EcoRII CCWGG 4 cut(s) 415, 1365, 1714, 1829
EcoRV GATATC 1 cut(s) 112
EcoT14I CCWWGG 1 cut(s) 132
EcoT38I GRGCYC 1 cut(s) 551
ErhI CCWWGG 1 cut(s) 132
FaeI CATG 7 cut(s) 292, 402, 659, 701, 883, 946, 1268
FalI AAGNNNNNCTT 2 cut(s) 721, 753
FaqI GGGAC 1 cut(s) 251
FatI CATG 7 cut(s) 288, 398, 655, 697, 879, 942, 1264
FbaI TGATCA 1 cut(s) 658
FblI GTMKAC 1 cut(s) 836
Fnu4HI GCNGC 3 cut(s) 1129, 1491, 1595
FokI GGATG 6 cut(s) 840, 884, 1119, 1337, 1415, 1519
FriOI GRGCYC 1 cut(s) 551
Fsp4HI GCNGC 3 cut(s) 1129, 1491, 1595
FspBI CTAG 1 cut(s) 1004
GluI GCNGC 3 cut(s) 1129, 1491, 1595
GsaI CCCAGC 1 cut(s) 393
GsuI CTGGAG 1 cut(s) 1751
HaeIII GGCC 3 cut(s) 549, 988, 1436
HapII CCGG 3 cut(s) 348, 948, 1504
HgaI GACGC 1 cut(s) 113
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 7 cut(s) 292, 402, 659, 701, 883, 946, 1268
HincII GTYRAC 1 cut(s) 837
HindII GTYRAC 1 cut(s) 837
HindIII AAGCTT 1 cut(s) 1656
HinfI GANTC 7 cut(s) 168, 536, 626, 821, 1103, 1541, 1762
HpaII CCGG 3 cut(s) 348, 948, 1504
HphI GGTGA 2 cut(s) 533, 809
Hpy166II GTNNAC 5 cut(s) 374, 837, 877, 1262, 1501
Hpy188I TCNGA 6 cut(s) 103, 625, 724, 804, 1324, 1669
Hpy188III TCNNGA 9 cut(s) 7, 259, 312, 1012, 1136, 1576, 1626, 1652, 1820
Hpy8I GTNNAC 5 cut(s) 374, 837, 877, 1262, 1501
Hpy99I CGWCG 1 cut(s) 107
HpyAV CCTTC 9 cut(s) 4, 256, 291, 362, 947, 999, 1075, 1093, 1717
HpyCH4III ACNGT 8 cut(s) 42, 76, 247, 922, 1316, 1425, 1573, 1702
HpyCH4IV ACGT 1 cut(s) 1454
HpyF10VI GCNNNNNNNGC 7 cut(s) 104, 395, 434, 476, 743, 910, 1325
HpyF3I CTNAG 5 cut(s) 574, 774, 867, 1242, 1483
HpySE526I ACGT 1 cut(s) 1454
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 7 cut(s) 292, 402, 659, 701, 883, 946, 1268
Ksp22I TGATCA 1 cut(s) 658
Kzo9I GATC 9 cut(s) 271, 595, 650, 658, 799, 847, 1245, 1648, 1794
LmnI GCTCC 1 cut(s) 433
Lsp1109I GCAGC 2 cut(s) 1140, 1502
LweI GCATC 9 cut(s) 106, 571, 862, 1005, 1315, 1393, 1408, 1497, 1673
MabI ACCWGGT 2 cut(s) 1365, 1714
MaeI CTAG 1 cut(s) 1004
MaeII ACGT 1 cut(s) 1454
MaeIII GTNAC 4 cut(s) 521, 781, 1044, 1525
MalI GATC 9 cut(s) 273, 597, 652, 660, 801, 849, 1247, 1650, 1796
MboI GATC 9 cut(s) 271, 595, 650, 658, 799, 847, 1245, 1648, 1794
MboII GAAGA 6 cut(s) 70, 79, 590, 1097, 1187, 1621
MflI RGATCY 4 cut(s) 595, 1245, 1648, 1794
MhlI GDGCHC 1 cut(s) 551
MluCI AATT 5 cut(s) 234, 504, 618, 1031, 1467
MlyI GAGTC 3 cut(s) 177, 1112, 1535
MmeI TCCRAC 1 cut(s) 126
MroXI GAANNNNTTC 3 cut(s) 87, 237, 1182
MseI TTAA 5 cut(s) 408, 473, 500, 1344, 1371
MslI CAYNNNNRTG 3 cut(s) 437, 516, 702
MspI CCGG 3 cut(s) 348, 948, 1504
MspR9I CCNGG 6 cut(s) 348, 417, 948, 1367, 1716, 1831
MvaI CCWGG 4 cut(s) 417, 1367, 1716, 1831
MwoI GCNNNNNNNGC 7 cut(s) 104, 395, 434, 476, 743, 910, 1325
NciI CCSGG 2 cut(s) 348, 948
NdeII GATC 9 cut(s) 271, 595, 650, 658, 799, 847, 1245, 1648, 1794
NlaIII CATG 7 cut(s) 292, 402, 659, 701, 883, 946, 1268
NlaIV GGNNCC 6 cut(s) 267, 549, 597, 1435, 1650, 1796
NmuCI GTSAC 2 cut(s) 521, 1525
NspI RCATGY 3 cut(s) 701, 883, 1268
PceI AGGCCT 1 cut(s) 988
PciI ACATGT 2 cut(s) 697, 1264
PcsI WCGNNNNNNNCGW 1 cut(s) 111
PdmI GAANNNNTTC 3 cut(s) 87, 237, 1182
PfeI GAWTC 4 cut(s) 536, 626, 821, 1762
PfoI TCCNGGA 1 cut(s) 415
PkrI GCNGC 3 cut(s) 1130, 1492, 1596
PleI GAGTC 3 cut(s) 176, 1111, 1535
PpsI GAGTC 3 cut(s) 176, 1111, 1535
PpuMI RGGWCCY 1 cut(s) 265
PscI ACATGT 2 cut(s) 697, 1264
Psp5II RGGWCCY 1 cut(s) 265
Psp6I CCWGG 4 cut(s) 415, 1365, 1714, 1829
PspFI CCCAGC 1 cut(s) 389
PspGI CCWGG 4 cut(s) 415, 1365, 1714, 1829
PspN4I GGNNCC 6 cut(s) 267, 549, 597, 1435, 1650, 1796
PspOMI GGGCCC 1 cut(s) 547
PspPI GGNCC 5 cut(s) 72, 265, 547, 548, 1434
PspPPI RGGWCCY 1 cut(s) 265
PstNI CAGNNNCTG 2 cut(s) 40, 50
PsuI RGATCY 4 cut(s) 595, 1245, 1648, 1794
RsaI GTAC 3 cut(s) 1263, 1457, 1696
RsaNI GTAC 3 cut(s) 1262, 1456, 1695
RseI CAYNNNNRTG 3 cut(s) 437, 516, 702
SalI GTCGAC 1 cut(s) 835
SaqAI TTAA 5 cut(s) 408, 473, 500, 1344, 1371
SatI GCNGC 3 cut(s) 1129, 1491, 1595
Sau3AI GATC 9 cut(s) 271, 595, 650, 658, 799, 847, 1245, 1648, 1794
Sau96I GGNCC 5 cut(s) 72, 265, 547, 548, 1434
SchI GAGTC 3 cut(s) 177, 1112, 1535
ScrFI CCNGG 6 cut(s) 348, 417, 948, 1367, 1716, 1831
SduI GDGCHC 1 cut(s) 551
SexAI ACCWGGT 2 cut(s) 1365, 1714
SfaNI GCATC 9 cut(s) 106, 571, 862, 1005, 1315, 1393, 1408, 1497, 1673
SfcI CTRYAG 3 cut(s) 1062, 1287, 1461
SinI GGWCC 2 cut(s) 72, 265
SmiMI CAYNNNNRTG 3 cut(s) 437, 516, 702
Sse9I AATT 5 cut(s) 234, 504, 618, 1031, 1467
SseBI AGGCCT 1 cut(s) 988
SsiI CCGC 3 cut(s) 404, 1126, 1594
SspMI CTAG 1 cut(s) 1004
StuI AGGCCT 1 cut(s) 988
StyD4I CCNGG 6 cut(s) 346, 415, 946, 1365, 1714, 1829
StyI CCWWGG 1 cut(s) 132
TaaI ACNGT 8 cut(s) 42, 76, 247, 922, 1316, 1425, 1573, 1702
TaiI ACGT 1 cut(s) 1457
TaqI TCGA 4 cut(s) 114, 166, 313, 836
TaqII GACCGA 3 cut(s) 15, 1206, 1210
TasI AATT 5 cut(s) 234, 504, 618, 1031, 1467
TatI WGTACW 2 cut(s) 1261, 1694
TauI GCSGC 1 cut(s) 1597
TfiI GAWTC 4 cut(s) 536, 626, 821, 1762
Tru1I TTAA 5 cut(s) 408, 473, 500, 1344, 1371
Tru9I TTAA 5 cut(s) 408, 473, 500, 1344, 1371
TscAI CASTG 5 cut(s) 469, 1213, 1321, 1336, 1428
TseFI GTSAC 2 cut(s) 521, 1525
TseI GCWGC 2 cut(s) 1128, 1490
Tsp45I GTSAC 2 cut(s) 521, 1525
TspDTI ATGAA 3 cut(s) 277, 618, 1460
TspRI CASTG 5 cut(s) 469, 1213, 1321, 1336, 1428
VpaK11BI GGWCC 2 cut(s) 72, 265
XagI CCTNNNNNAGG 2 cut(s) 260, 366
XapI RAATTY 3 cut(s) 234, 618, 1467
XceI RCATGY 3 cut(s) 701, 883, 1268
XcmI CCANNNNNNNNNTGG 1 cut(s) 1396
XmiI GTMKAC 1 cut(s) 836
XmnI GAANNNNTTC 3 cut(s) 87, 237, 1182
XspI CTAG 1 cut(s) 1004
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.