Rmu_sc0009002.1_g000005

eukaryotic translation initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009002.1
OG0000686
Physical Location & Seq
Forward (+)
16801 .. 22200
5400 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009002.1_g000005.1.cds

Sequence Viewer

Length: 2097 bp
atggtgtggagatggtgttgcatgtcgggaacgacggagaggatggcagggtgggattggagctatgatttgagagtagagggctcgcgagcccgtccgctctatgttgaccagcggcaccctcttcaatctcgtctccgattccgtccgctcctctccaccgaaaaacagctgtatcgccaacattccgaccaccttcagctcccgaaactcgtgcccgctcgctccgatcgccacgtggtgtgctatgttcccgccggcgctgtccccgggcagaaaacactgcccgagattcgcgccctcgaacaagctactttgactgtctgcgatgaacttgaggacttcgaaaccgtcgtcgtactggcacggatatcgatgctccggcgcggggcggtagttgacggagacgacgacggcggggagctcgcgagcgaagcgtttacagaagtcgtcgtagggttcaagagagagagagggaggagagatgttcaagaagggagtggaagcgcggtcgcaccagtcctgcgaatggtccctgatctcttgccttctttcatgctgaaagggggcgaggtttctcgttatgttattggcggggcggatttgatgtttcccggtatcagcatacctgctgaaggtttaccatcgtttatagctggggaagcatgggcggttaaagttccaggaaatccagctcccattgctgtgggaactactactatgagttgcactgaagcattaaaagctggattgcgtggaaaagccttaaaaattgctcactattatggtgacttactttgggaatcagttgagggcccttatgtgccaaatgcaggtttcttagaagatgttgtttttgaggatcctaccttgtcatcagctcaaatttctgattcatacaatggtgcaaatgatggatcacatgatcaactgaatggcattgatgataaggaaatggggcaacatgttgatgttgctgatatgcagtctgaaccaagttctgcttcggttgcactgattgatgttaggaatgagattgctgaggaagtaactgcaaatgtaggtgatctgaagctaacagatgatgattctgctaatcagtcgactggggaggatcaacatcctctttctgccgagaatgtggacatgctttgggaaaaatgccttttgcaagcattgcatacaactgtcaaagacaaagaccttcccatgcccggaagcactctatggtcaaactatgttttaccttgtaggccttcaggcgtcacactagacatcaagaaatcatcacacaagaaattatcgaagtggttgcaagctaaatgttctacaggattgattagagtgaaggaagataaatataagaaggagtctgtattactttctattgaccgcagccatccagattactcgtctttcaagccagagaaacgacaagttgaagaagctgttcaaactggtgttcctgctgtctgtgaaagtcggtcggtcaaaatccttgaagtggctgagatctataaaccaaatgtacatgtaaatccagtatttgcttctgtaggtgctgacacaggcgagctttacagtgcttcggatgccactgatattgtgtttaaatatgttgaaaaggaaaacctggttaagccgacagataaatccattgtgattttggatgcgatactgtgtgatgcactgttcaagggggccataaagaaaggttcaacgtaccctacagaaattcataaaagagacttaggagcagcgtttgtgaaccggatgcaggcccatcacattgtgacaaggggaaatgactcggttgttcgtttgaaaacagtccagataatgacagaaaggcggcaaggtaataagaagatgaccaagttatcaggactggaaacatttttagtggatcctgaagctttggcatcagagctacaaaagaagttcgcttgtagtacaagggtggcggaactaccaggtaagaaggggctggaggttcttgttcaaggtggagtgattgagaatctggcaaaacacttgattgaacaatatgggatcccaaagagatacattgaagttcttgacaaaaccaggagatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SUI1

Protein Analysis

698

Amino Acids

76.93

Weight (kDa)

5.9

Isoelectric Point (pI)

45.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000686)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G71350
fragaria_vesca FvH4_2g00430 FvH4_2g00430 FvH4_2g00430 FvH4_2g00430
malus_domestica MD10G1002600.v1.1
prunus_persica Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0249251 RchiOBHm_Chr6g0249261 RchiOBHm_Chr6g0249701 RchiOBHm_Chr6g0249761 RchiOBHm_Chr6g0249851 RchiOBHm_Chr6g0249861 RchiOBHm_Chr6g0249871 RchiOBHm_Chr6g0249891 RchiOBHm_Chr6g0249901 RchiOBHm_Chr6g0249911 RchiOBHm_Chr6g0249981 RchiOBHm_Chr6g0249991 RchiOBHm_Chr6g0250001 RchiOBHm_Chr6g0250151 RchiOBHm_Chr6g0250171 RchiOBHm_Chr6g0250191 RchiOBHm_Chr6g0250211 RchiOBHm_Chr6g0250221 RchiOBHm_Chr6g0250321 RchiOBHm_Chr6g0250391
rosa_laevigata RLG00000015543 RLG00000015548
rosa_multiflora Rmu_sc0000411.1_g000004 Rmu_sc0000411.1_g000009 Rmu_sc0000704.1_g000007 Rmu_sc0000704.1_g000011 Rmu_sc0001209.1_g000038 Rmu_sc0001209.1_g000042 Rmu_sc0001209.1_g000048 Rmu_sc0003293.1_g000005 Rmu_sc0004691.1_g000005 Rmu_sc0004691.1_g000007 Rmu_sc0004691.1_g000009 Rmu_sc0006032.1_g000001 Rmu_sc0006032.1_g000004 Rmu_sc0006032.1_g000005 Rmu_sc0008209.1_g000003 Rmu_sc0008209.1_g000010 Rmu_sc0009002.1_g000001 Rmu_sc0009002.1_g000005 Rmu_sc0009002.1_g000009
rosa_roxburghii Rroxscaffold_3G00218110 Rroxscaffold_7G00217270 Rroxscaffold_7G00217290 Rroxscaffold_7G00217300 Rroxscaffold_7G00217340
rosa_rugosa Rorug05G0494700 Rorug05G0495000 Rorug05G0496000 Rorug05G0498100 Rorug05G0498200
rosa_samantha Rh6AG000200 Rh6AG000300 Rh6AG004700 Rh6AG004800 Rh6AG005200 Rh6AG005300 Rh6AG005600 Rh6BG005500 Rh6BG005600 Rh6CG003700 Rh6DG003600
rosa_wichuraiana Rw6G000560 Rw6G000600 Rw6G000620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 637, 824
AccB1I GGYRCC 1 cut(s) 117
AccBSI CCGCTC 3 cut(s) 100, 151, 221
AccI GTMKAC 1 cut(s) 1103
AccII CGCG 5 cut(s) 88, 297, 387, 428, 509
AclWI GGATC 8 cut(s) 857, 870, 925, 1122, 1901, 1914, 2047, 2060
AcsI RAATTY 2 cut(s) 885, 1734
AcuI CTGAAG 6 cut(s) 182, 654, 753, 1091, 1242, 1932
AcvI CACGTG 1 cut(s) 238
AcyI GRCGYC 1 cut(s) 1263
AdeI CACNNNGTG 2 cut(s) 241, 1792
AfaI GTAC 4 cut(s) 360, 1530, 1724, 1954
AfiI CCNNNNNNNGG 7 cut(s) 388, 529, 635, 833, 1214, 1504, 1777
AflIII ACRYGT 2 cut(s) 964, 1531
AjnI CCWGG 4 cut(s) 682, 1632, 1972, 2087
AjuI GAANNNNNNNTTGG 2 cut(s) 988, 1020
Alw21I GWGCWC 1 cut(s) 426
Alw26I GTCTC 3 cut(s) 140, 399, 1740
AlwI GGATC 8 cut(s) 857, 870, 925, 1122, 1901, 1914, 2047, 2060
Ama87I CYCGRG 2 cut(s) 269, 287
AoxI GGCC 4 cut(s) 814, 1253, 1701, 1779
ApaI GGGCCC 1 cut(s) 818
ApeKI GCWGC 2 cut(s) 1395, 1757
ApoI RAATTY 2 cut(s) 885, 1734
ArsI GACNNNNNNTTYG 2 cut(s) 339, 371
Asp700I GAANNNNTTC 1 cut(s) 1449
AspLEI GCGC 4 cut(s) 263, 299, 387, 509
AspS9I GGNCC 5 cut(s) 532, 814, 815, 1701, 1780
AsuC2I CCSGG 4 cut(s) 270, 271, 615, 1215
AsuHPI GGTGA 2 cut(s) 800, 1076
AsuII TTCGAA 1 cut(s) 345
AvaI CYCGRG 2 cut(s) 269, 287
AvaII GGWCC 1 cut(s) 532
BaeGI GKGCMC 2 cut(s) 219, 818
BaeI ACNNNNGTAYC 2 cut(s) 158, 191
BamHI GGATCC 3 cut(s) 862, 1906, 2052
BanI GGYRCC 1 cut(s) 117
BanII GRGCYC 4 cut(s) 86, 94, 426, 818
BauI CACGAG 1 cut(s) 212
BbrPI CACGTG 1 cut(s) 238
Bbv12I GWGCWC 1 cut(s) 426
BbvCI CCTCAGC 1 cut(s) 1041
BbvI GCAGC 2 cut(s) 1407, 1769
BccI CCATC 6 cut(s) 6, 37, 652, 908, 1407, 1791
BceAI ACGGC 1 cut(s) 430
BcgI CGANNNNNNTGC 6 cut(s) 196, 230, 354, 388, 1294, 1328
BciT130I CCWGG 4 cut(s) 684, 1634, 1974, 2089
BclI TGATCA 1 cut(s) 925
BcnI CCSGG 4 cut(s) 270, 271, 615, 1215
BcoDI GTCTC 3 cut(s) 140, 399, 1740
BfaI CTAG 1 cut(s) 1271
BfmI CTRYAG 3 cut(s) 1329, 1554, 1728
BfoI RGCGCY 1 cut(s) 264
BfuAI ACCTGC 2 cut(s) 637, 824
BglII AGATCT 1 cut(s) 1512
BisI GCNGC 4 cut(s) 116, 1396, 1758, 1853
BlsI GCNGC 4 cut(s) 117, 1397, 1759, 1854
Bme1390I CCNGG 8 cut(s) 270, 271, 615, 684, 1215, 1634, 1974, 2089
Bme18I GGWCC 1 cut(s) 532
BmeT110I CYCGRG 2 cut(s) 269, 287
BmgT120I GGNCC 5 cut(s) 532, 814, 815, 1701, 1780
BmiI GGNNCC 7 cut(s) 119, 534, 816, 864, 1702, 1908, 2054
BmrFI CCNGG 8 cut(s) 270, 271, 615, 684, 1215, 1634, 1974, 2089
BmrI ACTGGG 1 cut(s) 1116
BmsI GCATC 6 cut(s) 366, 1582, 1660, 1675, 1764, 1931
BmuI ACTGGG 1 cut(s) 1116
BpmI CTGGAG 1 cut(s) 2009
Bpu10I CCTNAGC 1 cut(s) 1041
Bpu14I TTCGAA 1 cut(s) 345
BpuEI CTTGAG 1 cut(s) 356
BpuMI CCSGG 4 cut(s) 270, 271, 615, 1215
Bsa29I ATCGAT 1 cut(s) 374
BsaAI YACGTR 1 cut(s) 238
BsaBI GATNNNNATC 1 cut(s) 1119
BsaHI GRCGYC 1 cut(s) 1263
BsaJI CCNNGG 2 cut(s) 268, 269
BsaWI WCCGGW 1 cut(s) 1770
BsaXI ACNNNNNCTCC 1 cut(s) 31
Bsc4I CCNNNNNNNGG 7 cut(s) 388, 529, 635, 833, 1214, 1504, 1777
Bse118I RCCGGY 1 cut(s) 257
Bse1I ACTGG 6 cut(s) 366, 518, 1111, 1462, 1541, 1893
Bse3DI GCAATG 2 cut(s) 699, 1175
Bse8I GATNNNNATC 1 cut(s) 1119
BseBI CCWGG 4 cut(s) 684, 1634, 1974, 2089
BseCI ATCGAT 1 cut(s) 374
BseDI CCNNGG 2 cut(s) 268, 269
BseGI GGATG 6 cut(s) 48, 1120, 1399, 1597, 1675, 1779
BseJI GATNNNNATC 1 cut(s) 1119
BseLI CCNNNNNNNGG 7 cut(s) 388, 529, 635, 833, 1214, 1504, 1777
BseMI GCAATG 2 cut(s) 699, 1175
BseMII CTCAG 2 cut(s) 1032, 1500
BseNI ACTGG 6 cut(s) 366, 518, 1111, 1462, 1541, 1893
BseRI GAGGAG 2 cut(s) 143, 493
BseSI GKGCMC 2 cut(s) 219, 818
BseXI GCAGC 2 cut(s) 1407, 1769
BseYI CCCAGC 1 cut(s) 656
Bsh1236I CGCG 5 cut(s) 88, 297, 387, 428, 509
Bsh1285I CGRYCG 3 cut(s) 232, 513, 1487
BshFI GGCC 4 cut(s) 816, 1255, 1703, 1781
BshNI GGYRCC 1 cut(s) 117
BshVI ATCGAT 1 cut(s) 374
BsiEI CGRYCG 3 cut(s) 232, 513, 1487
BsiHKAI GWGCWC 1 cut(s) 426
BsiHKCI CYCGRG 2 cut(s) 269, 287
BsiSI CCGG 6 cut(s) 258, 270, 382, 615, 1215, 1771
BslFI GGGAC 2 cut(s) 251, 518
BslI CCNNNNNNNGG 7 cut(s) 388, 529, 635, 833, 1214, 1504, 1777
BsmAI GTCTC 3 cut(s) 140, 399, 1740
BsmBI CGTCTC 2 cut(s) 140, 399
BsmFI GGGAC 2 cut(s) 251, 518
BsnI GGCC 4 cut(s) 816, 1255, 1703, 1781
BsoBI CYCGRG 2 cut(s) 269, 287
Bsp119I TTCGAA 1 cut(s) 345
Bsp120I GGGCCC 1 cut(s) 814
Bsp1286I GDGCHC 5 cut(s) 86, 94, 219, 426, 818
Bsp1407I TGTACA 1 cut(s) 1528
Bsp68I TCGCGA 2 cut(s) 88, 428
BspANI GGCC 4 cut(s) 816, 1255, 1703, 1781
BspCNI CTCAG 2 cut(s) 1033, 1501
BspDI ATCGAT 1 cut(s) 374
BspFNI CGCG 5 cut(s) 88, 297, 387, 428, 509
BspLI GGNNCC 7 cut(s) 119, 534, 816, 864, 1702, 1908, 2054
BspMI ACCTGC 2 cut(s) 637, 824
BspPI GGATC 8 cut(s) 857, 870, 925, 1122, 1901, 1914, 2047, 2060
BspT104I TTCGAA 1 cut(s) 345
BspT107I GGYRCC 1 cut(s) 117
BsrBI CCGCTC 3 cut(s) 100, 151, 221
BsrDI GCAATG 2 cut(s) 699, 1175
BsrFI RCCGGY 1 cut(s) 257
BsrGI TGTACA 1 cut(s) 1528
BsrI ACTGG 6 cut(s) 366, 518, 1111, 1462, 1541, 1893
BssAI RCCGGY 1 cut(s) 257
BssECI CCNNGG 2 cut(s) 268, 269
BssNI GRCGYC 1 cut(s) 1263
BssSI CACGAG 1 cut(s) 212
Bst2BI CACGAG 1 cut(s) 212
Bst2UI CCWGG 4 cut(s) 684, 1634, 1974, 2089
Bst4CI ACNGT 7 cut(s) 322, 352, 1189, 1583, 1680, 1692, 1831
Bst6I CTCTTC 1 cut(s) 129
BstACI GRCGYC 1 cut(s) 1263
BstAPI GCANNNNNTGC 1 cut(s) 1177
BstAUI TGTACA 1 cut(s) 1528
BstBAI YACGTR 1 cut(s) 238
BstBI TTCGAA 1 cut(s) 345
BstDEI CTNAG 4 cut(s) 841, 1041, 1509, 1750
BstENI CCTNNNNNAGG 1 cut(s) 633
BstF5I GGATG 6 cut(s) 48, 1120, 1399, 1597, 1675, 1779
BstFNI CGCG 5 cut(s) 88, 297, 387, 428, 509
BstH2I RGCGCY 1 cut(s) 264
BstHHI GCGC 4 cut(s) 263, 299, 387, 509
BstMAI GTCTC 3 cut(s) 140, 399, 1740
BstMCI CGRYCG 3 cut(s) 232, 513, 1487
BstMWI GCNNNNNNNGC 8 cut(s) 231, 434, 662, 701, 743, 1010, 1177, 1592
BstNI CCWGG 4 cut(s) 684, 1634, 1974, 2089
BstNSI RCATGY 4 cut(s) 25, 968, 1150, 1535
BstSCI CCNGG 8 cut(s) 268, 269, 613, 682, 1213, 1632, 1972, 2087
BstSFI CTRYAG 3 cut(s) 1329, 1554, 1728
BstSLI GKGCMC 2 cut(s) 219, 818
BstUI CGCG 5 cut(s) 88, 297, 387, 428, 509
BstV1I GCAGC 2 cut(s) 1407, 1769
BstX2I RGATCY 4 cut(s) 862, 1512, 1906, 2052
BstXI CCANNNNNNTGG 1 cut(s) 706
BstYI RGATCY 4 cut(s) 862, 1512, 1906, 2052
Bsu15I ATCGAT 1 cut(s) 374
BsuRI GGCC 4 cut(s) 816, 1255, 1703, 1781
BsuTUI ATCGAT 1 cut(s) 374
BtgZI GCGATG 1 cut(s) 342
BtsCI GGATG 6 cut(s) 48, 1120, 1399, 1597, 1675, 1779
BtsI GCAGTG 1 cut(s) 281
BtsIMutI CAGTG 6 cut(s) 281, 729, 1013, 1588, 1596, 1688
BtuMI TCGCGA 2 cut(s) 88, 428
BveI ACCTGC 2 cut(s) 637, 824
CfoI GCGC 4 cut(s) 263, 299, 387, 509
Cfr10I RCCGGY 1 cut(s) 257
Cfr13I GGNCC 5 cut(s) 532, 814, 815, 1701, 1780
Cfr9I CCCGGG 1 cut(s) 269
ClaI ATCGAT 1 cut(s) 374
CseI GACGC 1 cut(s) 1252
CsiI ACCWGGT 2 cut(s) 1632, 1972
Csp6I GTAC 4 cut(s) 359, 1529, 1723, 1953
CspCI CAANNNNNGTGG 2 cut(s) 1585, 1620
CviAII CATG 8 cut(s) 22, 556, 666, 923, 965, 1147, 1210, 1532
CviQI GTAC 4 cut(s) 359, 1529, 1723, 1953
DdeI CTNAG 4 cut(s) 841, 1041, 1509, 1750
DraI TTTAAA 1 cut(s) 1612
DraIII CACNNNGTG 2 cut(s) 241, 1792
Eam1104I CTCTTC 1 cut(s) 129
EarI CTCTTC 1 cut(s) 129
EciI GGCGGA 2 cut(s) 614, 1979
Ecl136II GAGCTC 1 cut(s) 424
Eco147I AGGCCT 1 cut(s) 1255
Eco24I GRGCYC 4 cut(s) 86, 94, 426, 818
Eco32I GATATC 1 cut(s) 372
Eco47I GGWCC 1 cut(s) 532
Eco53kI GAGCTC 1 cut(s) 424
Eco57I CTGAAG 6 cut(s) 182, 654, 753, 1091, 1242, 1932
Eco72I CACGTG 1 cut(s) 238
Eco88I CYCGRG 2 cut(s) 269, 287
EcoICRI GAGCTC 1 cut(s) 424
EcoNI CCTNNNNNAGG 1 cut(s) 633
EcoO109I RGGNCCY 2 cut(s) 814, 815
EcoRII CCWGG 4 cut(s) 682, 1632, 1972, 2087
EcoRV GATATC 1 cut(s) 372
EcoT38I GRGCYC 4 cut(s) 86, 94, 426, 818
Esp3I CGTCTC 2 cut(s) 140, 399
FaeI CATG 8 cut(s) 25, 559, 669, 926, 968, 1150, 1213, 1535
FalI AAGNNNNNCTT 2 cut(s) 988, 1020
FaqI GGGAC 2 cut(s) 251, 518
FatI CATG 8 cut(s) 21, 555, 665, 922, 964, 1146, 1209, 1531
FauI CCCGC 5 cut(s) 226, 262, 380, 410, 587
FbaI TGATCA 1 cut(s) 925
FblI GTMKAC 1 cut(s) 1103
Fnu4HI GCNGC 4 cut(s) 116, 1396, 1758, 1853
FokI GGATG 6 cut(s) 55, 1107, 1386, 1604, 1682, 1786
FriOI GRGCYC 4 cut(s) 86, 94, 426, 818
Fsp4HI GCNGC 4 cut(s) 116, 1396, 1758, 1853
FspBI CTAG 1 cut(s) 1271
GlaI GCGC 4 cut(s) 262, 298, 386, 508
GluI GCNGC 4 cut(s) 116, 1396, 1758, 1853
GsaI CCCAGC 1 cut(s) 660
GsuI CTGGAG 1 cut(s) 2009
HaeII RGCGCY 1 cut(s) 264
HaeIII GGCC 4 cut(s) 816, 1255, 1703, 1781
HapII CCGG 6 cut(s) 258, 270, 382, 615, 1215, 1771
HgaI GACGC 1 cut(s) 1252
HhaI GCGC 4 cut(s) 263, 299, 387, 509
Hin1I GRCGYC 1 cut(s) 1263
Hin1II CATG 8 cut(s) 25, 559, 669, 926, 968, 1150, 1213, 1535
Hin6I GCGC 4 cut(s) 261, 297, 385, 507
HinP1I GCGC 4 cut(s) 261, 297, 385, 507
HincII GTYRAC 3 cut(s) 109, 400, 1104
HindII GTYRAC 3 cut(s) 109, 400, 1104
HindIII AAGCTT 1 cut(s) 1914
HinfI GANTC 8 cut(s) 141, 292, 803, 893, 1088, 1370, 1808, 2020
HpaII CCGG 6 cut(s) 258, 270, 382, 615, 1215, 1771
HphI GGTGA 2 cut(s) 800, 1076
Hpy166II GTNNAC 7 cut(s) 109, 400, 441, 641, 1104, 1144, 1768
Hpy188I TCNGA 8 cut(s) 140, 190, 229, 892, 991, 1071, 1591, 1927
Hpy8I GTNNAC 7 cut(s) 109, 400, 441, 641, 1104, 1144, 1768
Hpy99I CGWCG 6 cut(s) 37, 356, 359, 413, 416, 455
HpyAV CCTTC 9 cut(s) 206, 488, 558, 629, 1214, 1266, 1342, 1360, 1975
HpyCH4III ACNGT 7 cut(s) 322, 352, 1189, 1583, 1680, 1692, 1831
HpyCH4IV ACGT 2 cut(s) 237, 1721
HpyF10VI GCNNNNNNNGC 8 cut(s) 231, 434, 662, 701, 743, 1010, 1177, 1592
HpyF3I CTNAG 4 cut(s) 841, 1041, 1509, 1750
HpySE526I ACGT 2 cut(s) 237, 1721
Hsp92I GRCGYC 1 cut(s) 1263
Hsp92II CATG 8 cut(s) 25, 559, 669, 926, 968, 1150, 1213, 1535
HspAI GCGC 4 cut(s) 261, 297, 385, 507
KroI GCCGGC 1 cut(s) 257
KroNI GCCGGC 1 cut(s) 259
Ksp22I TGATCA 1 cut(s) 925
LmnI GCTCC 8 cut(s) 60, 156, 207, 230, 384, 421, 700, 1754
Lsp1109I GCAGC 2 cut(s) 1407, 1769
LweI GCATC 6 cut(s) 366, 1582, 1660, 1675, 1764, 1931
MabI ACCWGGT 2 cut(s) 1632, 1972
MaeI CTAG 1 cut(s) 1271
MaeII ACGT 2 cut(s) 237, 1721
MaeIII GTNAC 4 cut(s) 788, 1048, 1264, 1792
MbiI CCGCTC 3 cut(s) 100, 151, 221
MboII GAAGA 5 cut(s) 116, 857, 1364, 1454, 1879
MflI RGATCY 4 cut(s) 862, 1512, 1906, 2052
MhlI GDGCHC 5 cut(s) 86, 94, 219, 426, 818
MluCI AATT 4 cut(s) 771, 885, 1298, 1734
MlyI GAGTC 2 cut(s) 1379, 1802
MmeI TCCRAC 1 cut(s) 213
MreI CGCCGGCG 1 cut(s) 257
MroNI GCCGGC 1 cut(s) 257
MroXI GAANNNNTTC 1 cut(s) 1449
MseI TTAA 5 cut(s) 675, 740, 767, 1611, 1638
MslI CAYNNNNRTG 3 cut(s) 704, 783, 969
MspA1I CMGCKG 2 cut(s) 115, 172
MspI CCGG 6 cut(s) 258, 270, 382, 615, 1215, 1771
MspR9I CCNGG 8 cut(s) 270, 271, 615, 684, 1215, 1634, 1974, 2089
MvaI CCWGG 4 cut(s) 684, 1634, 1974, 2089
MvnI CGCG 5 cut(s) 88, 297, 387, 428, 509
MwoI GCNNNNNNNGC 8 cut(s) 231, 434, 662, 701, 743, 1010, 1177, 1592
NaeI GCCGGC 1 cut(s) 259
NciI CCSGG 4 cut(s) 270, 271, 615, 1215
NgoMIV GCCGGC 1 cut(s) 257
NlaIII CATG 8 cut(s) 25, 559, 669, 926, 968, 1150, 1213, 1535
NlaIV GGNNCC 7 cut(s) 119, 534, 816, 864, 1702, 1908, 2054
NmeAIII GCCGAG 1 cut(s) 1159
NmuCI GTSAC 3 cut(s) 788, 1264, 1792
NruI TCGCGA 2 cut(s) 88, 428
NspI RCATGY 4 cut(s) 25, 968, 1150, 1535
NspV TTCGAA 1 cut(s) 345
PceI AGGCCT 1 cut(s) 1255
PciI ACATGT 2 cut(s) 964, 1531
PcsI WCGNNNNNNNCGW 2 cut(s) 351, 408
PdiI GCCGGC 1 cut(s) 259
PdmI GAANNNNTTC 1 cut(s) 1449
PfeI GAWTC 6 cut(s) 141, 292, 803, 893, 1088, 2020
PfoI TCCNGGA 1 cut(s) 682
PkrI GCNGC 4 cut(s) 117, 1397, 1759, 1854
Ple19I CGATCG 1 cut(s) 232
PleI GAGTC 2 cut(s) 1378, 1802
PmaCI CACGTG 1 cut(s) 238
PmlI CACGTG 1 cut(s) 238
PpsI GAGTC 2 cut(s) 1378, 1802
Ppu21I YACGTR 1 cut(s) 238
PscI ACATGT 2 cut(s) 964, 1531
Psp124BI GAGCTC 1 cut(s) 426
Psp6I CCWGG 4 cut(s) 682, 1632, 1972, 2087
PspCI CACGTG 1 cut(s) 238
PspFI CCCAGC 1 cut(s) 656
PspGI CCWGG 4 cut(s) 682, 1632, 1972, 2087
PspN4I GGNNCC 7 cut(s) 119, 534, 816, 864, 1702, 1908, 2054
PspOMI GGGCCC 1 cut(s) 814
PspPI GGNCC 5 cut(s) 532, 814, 815, 1701, 1780
PsuI RGATCY 4 cut(s) 862, 1512, 1906, 2052
PvuI CGATCG 1 cut(s) 232
PvuII CAGCTG 1 cut(s) 172
RruI TCGCGA 2 cut(s) 88, 428
RsaI GTAC 4 cut(s) 360, 1530, 1724, 1954
RsaNI GTAC 4 cut(s) 359, 1529, 1723, 1953
RseI CAYNNNNRTG 3 cut(s) 704, 783, 969
SacI GAGCTC 1 cut(s) 426
SalI GTCGAC 1 cut(s) 1102
SaqAI TTAA 5 cut(s) 675, 740, 767, 1611, 1638
SatI GCNGC 4 cut(s) 116, 1396, 1758, 1853
Sau96I GGNCC 5 cut(s) 532, 814, 815, 1701, 1780
SchI GAGTC 2 cut(s) 1379, 1802
ScrFI CCNGG 8 cut(s) 270, 271, 615, 684, 1215, 1634, 1974, 2089
SduI GDGCHC 5 cut(s) 86, 94, 219, 426, 818
SexAI ACCWGGT 2 cut(s) 1632, 1972
SfaNI GCATC 6 cut(s) 366, 1582, 1660, 1675, 1764, 1931
SfcI CTRYAG 3 cut(s) 1329, 1554, 1728
SfuI TTCGAA 1 cut(s) 345
SgrAI CRCCGGYG 1 cut(s) 257
SinI GGWCC 1 cut(s) 532
SmaI CCCGGG 1 cut(s) 271
SmiMI CAYNNNNRTG 3 cut(s) 704, 783, 969
SmlI CTYRAG 1 cut(s) 335
SmoI CTYRAG 1 cut(s) 335
Sse9I AATT 4 cut(s) 771, 885, 1298, 1734
SseBI AGGCCT 1 cut(s) 1255
SspMI CTAG 1 cut(s) 1271
SstI GAGCTC 1 cut(s) 426
StuI AGGCCT 1 cut(s) 1255
StyD4I CCNGG 8 cut(s) 268, 269, 613, 682, 1213, 1632, 1972, 2087
TaaI ACNGT 7 cut(s) 322, 352, 1189, 1583, 1680, 1692, 1831
TaiI ACGT 2 cut(s) 240, 1724
TaqI TCGA 5 cut(s) 303, 345, 374, 1103, 1304
TaqII GACCGA 2 cut(s) 1473, 1477
TasI AATT 4 cut(s) 771, 885, 1298, 1734
TatI WGTACW 2 cut(s) 1528, 1952
TauI GCSGC 2 cut(s) 118, 1855
TfiI GAWTC 6 cut(s) 141, 292, 803, 893, 1088, 2020
Tru1I TTAA 5 cut(s) 675, 740, 767, 1611, 1638
Tru9I TTAA 5 cut(s) 675, 740, 767, 1611, 1638
TscAI CASTG 6 cut(s) 288, 736, 1020, 1588, 1603, 1695
TseFI GTSAC 3 cut(s) 788, 1264, 1792
TseI GCWGC 2 cut(s) 1395, 1757
Tsp45I GTSAC 3 cut(s) 788, 1264, 1792
TspDTI ATGAA 4 cut(s) 345, 544, 885, 1727
TspGWI ACGGA 4 cut(s) 50, 134, 382, 417
TspMI CCCGGG 1 cut(s) 269
TspRI CASTG 6 cut(s) 288, 736, 1020, 1588, 1603, 1695
VpaK11BI GGWCC 1 cut(s) 532
XagI CCTNNNNNAGG 1 cut(s) 633
XapI RAATTY 2 cut(s) 885, 1734
XceI RCATGY 4 cut(s) 25, 968, 1150, 1535
XcmI CCANNNNNNNNNTGG 1 cut(s) 1663
XmaI CCCGGG 1 cut(s) 269
XmiI GTMKAC 1 cut(s) 1103
XmnI GAANNNNTTC 1 cut(s) 1449
XspI CTAG 1 cut(s) 1271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.