Rroxscaffold_7G00217270

eukaryotic translation initiation factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000686
Physical Location & Seq
Forward (+)
67751442 .. 67756825
5384 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00217270.1

Sequence Viewer

Length: 1827 bp
ATGTTCAAGAAGGGAGTGGAAGCTCGGTCGCACCAGAGATTGTCAGGGGCTGACAGGAAGAAGCTGAAGAGGACCGTCAAGGAAAGATTTCCCAGAGCTTCCGACGCCGATGTCGATGCTTTACTCCCTCCCAAGGTGGAGATAAAGGTTTCAAAGTATCAAAATCGAGTCCTTGTATATGGCATAGAGGGAGGCTTTCCTATGTTTTTTGATATTGATGGGCGTGGCAAAGAAATTTTTCCCACAGTTTATGCCCTCTGGAAGGTCCCTGATCTCTTGCCTTCTTTCATGCTGAAAGGGGGCGAGGTTTCTCGATATGTTATTGGAGGGGCAGATTTGATGTTTCCTGGTATCAGCATACCTGCTGAAGGTTTACCATCGTTTATAGCTGGGGAAGCATGGGCGGTTAAAGTTCCAGGAAATCCAGCTCCCATTGCTGTGGGAACTACTACTATGAGTTGCACTGAAGCATTAAAAGCTGGATTGCGTGGAAAAGCCTTAAAAAATTGCTCACTATTATGGGAATCAGTTGAGGGCCCTTATGTGCCAAATGCAGGTTTCTTAGAAGATGCTGTTTTTGAGGATCCTACCTTGTCATCAGCTCAAATTTCTGATTCATATGATGGTGCAAATGATGGATCACATGATCAACTGAATGGCATTGATGATAAGGAAATGGGGCAACATGTTGACGTTGCTGATGTGCAGTCTGAACAAGGTTCTGCTTCGGTTGCACCGATTGATGTTAGGAATGAGATTGCTGAGGAAGTAACTGCAAATGTAGGTGATCTGAAGCTAACAGATGATGATTCTGCTAATCAGTCGACTGGGGAGGATCAACATCCTGTTTCTGCCGAGGATGTGGACATGCTTTTGGAAAAATGCCTTTTGCAAGCATTGCATACAACTGTCAAAGACAAAGACCTTCCCATGCCTGGAAGCACTCTATGGTCAAACTATGTTTTACCTTGTAGGCCTTCAGGCATCACACTAGACATCAAGAAATCATCACACAAGAAATTATCAAAGTGGTTACAAGCTAAATGTTCTACAGGATTGATTAGAGTGAAGGAAGATAAATATAAGAAGGAGTCTGTATTACTTTCTATTGACCGCAGCCATCCAGATTACTCGTCTTTCAAGCCAGAGAAACGACAAGTTGAAGAAGCTGTTCAAACTGGTGTTCCTGCTGTCAGTGAAAGTCGGTCGGTCAAAATCCTTGAAGTGGCTGAGATCTATAAACCAAGTGTACATGTAAATCCAGTTTTTGCTTCACTAGGTGCTGACACTGGCGAGCTTTACAGTGCTTCGGATGCCACTGACATTGTGTTTAAATATGTTGAAAAGGAAAACCTGGTTAAGCCGACAGATAAATCCATTGTGATTTTGGATGCGATATTGTGTGATGCATTGTTCAAGGGGGCCATAAAGAAAGGTTCAACATACCCTACAGAAATTCATAAAAGAGACTTAGGAGCAGCGTTTGTGAACCGGATGCAAGCCCATCACATTGTGACAAGGGGAAATGACTCGGTGGTTCGTAAAGGTGGTTTGAAAACAGTCCAGATAATGACAGAAAGGCGGCAAGGTAATAAGAAAATGACCAAGTTATCAGGACTGGAAACATTTTTAGTGGATCCTGAAGCTTTGGCATCAGAGCTACAAAAGAAGTTTGCTTGTAGTACAACGGTGGCAGAACTACCAGGTAAGAAGGGGCTGGAGGTTCTGGTTCAAGGTGGAGTGATTGAGAATCTGGCAAAACACTTGATTGAACAATATGGGATCCCAAAGAGATACATTGAGGTTCTTGACAAAACCAGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SUI1

Protein Analysis

608

Amino Acids

66.51

Weight (kDa)

6.36

Isoelectric Point (pI)

37.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pre-PUA PF17832 2 - 90 1.7e-18 Pre-PUA-like domain
PUA_elF2D PF26292 101 - 169 5.4e-18 elF2D, PUA domain
WHD_eIF2D PF25304 289 - 367 1.2e-28 eIF2D winged helix domain
SWIB_eIF2D PF26291 413 - 473 3.8e-12 eIF2D, SWIB domain
SUI1 PF01253 519 - 596 7.8e-22 Translation initiation factor SUI1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000686)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G71350
fragaria_vesca FvH4_2g00430 FvH4_2g00430 FvH4_2g00430 FvH4_2g00430
malus_domestica MD10G1002600.v1.1
prunus_persica Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1 Prupe.8G004200_v2.0.a1
rosa_chinensis RchiOBHm_Chr6g0249251 RchiOBHm_Chr6g0249261 RchiOBHm_Chr6g0249701 RchiOBHm_Chr6g0249761 RchiOBHm_Chr6g0249851 RchiOBHm_Chr6g0249861 RchiOBHm_Chr6g0249871 RchiOBHm_Chr6g0249891 RchiOBHm_Chr6g0249901 RchiOBHm_Chr6g0249911 RchiOBHm_Chr6g0249981 RchiOBHm_Chr6g0249991 RchiOBHm_Chr6g0250001 RchiOBHm_Chr6g0250151 RchiOBHm_Chr6g0250171 RchiOBHm_Chr6g0250191 RchiOBHm_Chr6g0250211 RchiOBHm_Chr6g0250221 RchiOBHm_Chr6g0250321 RchiOBHm_Chr6g0250391
rosa_laevigata RLG00000015543 RLG00000015548
rosa_multiflora Rmu_sc0000411.1_g000004 Rmu_sc0000411.1_g000009 Rmu_sc0000704.1_g000007 Rmu_sc0000704.1_g000011 Rmu_sc0001209.1_g000038 Rmu_sc0001209.1_g000042 Rmu_sc0001209.1_g000048 Rmu_sc0003293.1_g000005 Rmu_sc0004691.1_g000005 Rmu_sc0004691.1_g000007 Rmu_sc0004691.1_g000009 Rmu_sc0006032.1_g000001 Rmu_sc0006032.1_g000004 Rmu_sc0006032.1_g000005 Rmu_sc0008209.1_g000003 Rmu_sc0008209.1_g000010 Rmu_sc0009002.1_g000001 Rmu_sc0009002.1_g000005 Rmu_sc0009002.1_g000009
rosa_roxburghii Rroxscaffold_3G00218110 Rroxscaffold_7G00217270 Rroxscaffold_7G00217290 Rroxscaffold_7G00217300 Rroxscaffold_7G00217340
rosa_rugosa Rorug05G0494700 Rorug05G0495000 Rorug05G0496000 Rorug05G0498100 Rorug05G0498200
rosa_samantha Rh6AG000200 Rh6AG000300 Rh6AG004700 Rh6AG004800 Rh6AG005200 Rh6AG005300 Rh6AG005600 Rh6BG005500 Rh6BG005600 Rh6CG003700 Rh6DG003600
rosa_wichuraiana Rw6G000560 Rw6G000600 Rw6G000620

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 110
Acc36I ACCTGC 2 cut(s) 370, 545
AccI GTMKAC 1 cut(s) 824
AciI CCGC 3 cut(s) 404, 1114, 1582
AclWI GGATC 8 cut(s) 578, 591, 646, 843, 1631, 1644, 1777, 1790
AcsI RAATTY 3 cut(s) 234, 606, 1455
AcuI CTGAAG 6 cut(s) 86, 387, 486, 812, 963, 1662
AcyI GRCGYC 1 cut(s) 105
AdeI CACNNNGTG 2 cut(s) 1280, 1513
AfaI GTAC 2 cut(s) 1251, 1684
AfiI CCNNNNNNNGG 6 cut(s) 133, 262, 368, 554, 935, 1225
AflIII ACRYGT 2 cut(s) 685, 1252
AjnI CCWGG 6 cut(s) 346, 415, 934, 1353, 1702, 1817
Alw26I GTCTC 1 cut(s) 1461
AlwI GGATC 8 cut(s) 578, 591, 646, 843, 1631, 1644, 1777, 1790
AlwNI CAGNNNCTG 1 cut(s) 50
AoxI GGCC 3 cut(s) 535, 974, 1422
ApaI GGGCCC 1 cut(s) 539
ApeKI GCWGC 2 cut(s) 1116, 1478
ApoI RAATTY 3 cut(s) 234, 606, 1455
Asp700I GAANNNNTTC 3 cut(s) 87, 237, 1170
AspS9I GGNCC 5 cut(s) 72, 265, 535, 536, 1422
AsuHPI GGTGA 1 cut(s) 797
AvaII GGWCC 2 cut(s) 72, 265
BaeGI GKGCMC 1 cut(s) 539
BamHI GGATCC 3 cut(s) 583, 1636, 1782
BanII GRGCYC 1 cut(s) 539
BbvCI CCTCAGC 1 cut(s) 762
BbvI GCAGC 2 cut(s) 1128, 1490
BccI CCATC 6 cut(s) 212, 385, 617, 629, 1128, 1512
BcgI CGANNNNNNTGC 2 cut(s) 98, 132
BciT130I CCWGG 6 cut(s) 348, 417, 936, 1355, 1704, 1819
BclI TGATCA 1 cut(s) 646
BcoDI GTCTC 1 cut(s) 1461
BfaI CTAG 2 cut(s) 992, 1277
BfmI CTRYAG 2 cut(s) 1050, 1449
BfuAI ACCTGC 2 cut(s) 370, 545
BglII AGATCT 1 cut(s) 1233
BisI GCNGC 3 cut(s) 1117, 1479, 1583
BlsI GCNGC 3 cut(s) 1118, 1480, 1584
Bme1390I CCNGG 6 cut(s) 348, 417, 936, 1355, 1704, 1819
Bme18I GGWCC 2 cut(s) 72, 265
BmgT120I GGNCC 5 cut(s) 72, 265, 535, 536, 1422
BmiI GGNNCC 6 cut(s) 267, 537, 585, 1423, 1638, 1784
BmrFI CCNGG 6 cut(s) 348, 417, 936, 1355, 1704, 1819
BmrI ACTGGG 1 cut(s) 837
BmsI GCATC 8 cut(s) 106, 559, 993, 1303, 1381, 1396, 1485, 1661
BmuI ACTGGG 1 cut(s) 837
BpmI CTGGAG 1 cut(s) 1739
Bpu10I CCTNAGC 1 cut(s) 762
BsaBI GATNNNNATC 1 cut(s) 840
BsaHI GRCGYC 1 cut(s) 105
BsaJI CCNNGG 2 cut(s) 132, 855
BsaWI WCCGGW 1 cut(s) 1491
Bsc4I CCNNNNNNNGG 6 cut(s) 133, 262, 368, 554, 935, 1225
Bse1I ACTGG 5 cut(s) 832, 1183, 1262, 1294, 1623
Bse3DI GCAATG 2 cut(s) 432, 896
Bse8I GATNNNNATC 1 cut(s) 840
BseBI CCWGG 6 cut(s) 348, 417, 936, 1355, 1704, 1819
BseDI CCNNGG 2 cut(s) 132, 855
BseGI GGATG 6 cut(s) 841, 865, 1120, 1318, 1396, 1500
BseJI GATNNNNATC 1 cut(s) 840
BseLI CCNNNNNNNGG 6 cut(s) 133, 262, 368, 554, 935, 1225
BseMI GCAATG 2 cut(s) 432, 896
BseMII CTCAG 2 cut(s) 753, 1221
BseNI ACTGG 5 cut(s) 832, 1183, 1262, 1294, 1623
BseSI GKGCMC 1 cut(s) 539
BseXI GCAGC 2 cut(s) 1128, 1490
BseYI CCCAGC 1 cut(s) 389
BsgI GTGCAG 1 cut(s) 725
Bsh1285I CGRYCG 2 cut(s) 29, 1208
BshFI GGCC 3 cut(s) 537, 976, 1424
BsiEI CGRYCG 2 cut(s) 29, 1208
BsiSI CCGG 1 cut(s) 1492
BslFI GGGAC 1 cut(s) 251
BslI CCNNNNNNNGG 6 cut(s) 133, 262, 368, 554, 935, 1225
BsmAI GTCTC 1 cut(s) 1461
BsmFI GGGAC 1 cut(s) 251
BsnI GGCC 3 cut(s) 537, 976, 1424
Bsp120I GGGCCC 1 cut(s) 535
Bsp1286I GDGCHC 1 cut(s) 539
Bsp1407I TGTACA 1 cut(s) 1249
Bsp143I GATC 9 cut(s) 271, 583, 638, 646, 787, 835, 1233, 1636, 1782
BspACI CCGC 3 cut(s) 404, 1114, 1582
BspANI GGCC 3 cut(s) 537, 976, 1424
BspCNI CTCAG 2 cut(s) 754, 1222
BspLI GGNNCC 6 cut(s) 267, 537, 585, 1423, 1638, 1784
BspMI ACCTGC 2 cut(s) 370, 545
BspPI GGATC 8 cut(s) 578, 591, 646, 843, 1631, 1644, 1777, 1790
BsrDI GCAATG 2 cut(s) 432, 896
BsrGI TGTACA 1 cut(s) 1249
BsrI ACTGG 5 cut(s) 832, 1183, 1262, 1294, 1623
BssECI CCNNGG 2 cut(s) 132, 855
BssMI GATC 9 cut(s) 271, 583, 638, 646, 787, 835, 1233, 1636, 1782
BssNI GRCGYC 1 cut(s) 105
BssT1I CCWWGG 1 cut(s) 132
Bst2UI CCWGG 6 cut(s) 348, 417, 936, 1355, 1704, 1819
Bst4CI ACNGT 6 cut(s) 76, 247, 910, 1304, 1561, 1690
Bst6I CTCTTC 1 cut(s) 62
BstACI GRCGYC 1 cut(s) 105
BstAPI GCANNNNNTGC 1 cut(s) 898
BstAUI TGTACA 1 cut(s) 1249
BstC8I GCNNGC 3 cut(s) 894, 1295, 1500
BstDEI CTNAG 4 cut(s) 562, 762, 1230, 1471
BstENI CCTNNNNNAGG 2 cut(s) 260, 366
BstF5I GGATG 6 cut(s) 841, 865, 1120, 1318, 1396, 1500
BstKTI GATC 9 cut(s) 274, 586, 641, 649, 790, 838, 1236, 1639, 1785
BstMAI GTCTC 1 cut(s) 1461
BstMBI GATC 9 cut(s) 271, 583, 638, 646, 787, 835, 1233, 1636, 1782
BstMCI CGRYCG 2 cut(s) 29, 1208
BstMWI GCNNNNNNNGC 7 cut(s) 104, 395, 434, 476, 731, 898, 1313
BstNI CCWGG 6 cut(s) 348, 417, 936, 1355, 1704, 1819
BstNSI RCATGY 3 cut(s) 689, 871, 1256
BstSCI CCNGG 6 cut(s) 346, 415, 934, 1353, 1702, 1817
BstSFI CTRYAG 2 cut(s) 1050, 1449
BstSLI GKGCMC 1 cut(s) 539
BstV1I GCAGC 2 cut(s) 1128, 1490
BstX2I RGATCY 4 cut(s) 583, 1233, 1636, 1782
BstXI CCANNNNNNTGG 1 cut(s) 439
BstYI RGATCY 4 cut(s) 583, 1233, 1636, 1782
BsuRI GGCC 3 cut(s) 537, 976, 1424
BtsCI GGATG 6 cut(s) 841, 865, 1120, 1318, 1396, 1500
BtsIMutI CAGTG 5 cut(s) 462, 1201, 1287, 1309, 1317
BveI ACCTGC 2 cut(s) 370, 545
Cac8I GCNNGC 3 cut(s) 894, 1295, 1500
CaiI CAGNNNCTG 1 cut(s) 50
Cfr13I GGNCC 5 cut(s) 72, 265, 535, 536, 1422
CseI GACGC 1 cut(s) 113
CsiI ACCWGGT 2 cut(s) 1353, 1702
Csp6I GTAC 2 cut(s) 1250, 1683
CspCI CAANNNNNGTGG 2 cut(s) 1306, 1341
CviAII CATG 7 cut(s) 289, 399, 644, 686, 868, 931, 1253
CviQI GTAC 2 cut(s) 1250, 1683
DdeI CTNAG 4 cut(s) 562, 762, 1230, 1471
DpnI GATC 9 cut(s) 273, 585, 640, 648, 789, 837, 1235, 1638, 1784
DpnII GATC 9 cut(s) 271, 583, 638, 646, 787, 835, 1233, 1636, 1782
DraI TTTAAA 1 cut(s) 1333
DraIII CACNNNGTG 2 cut(s) 1280, 1513
DrdI GACNNNNNNGTC 1 cut(s) 110
DseDI GACNNNNNNGTC 1 cut(s) 110
Eam1104I CTCTTC 1 cut(s) 62
EarI CTCTTC 1 cut(s) 62
Eco130I CCWWGG 1 cut(s) 132
Eco147I AGGCCT 1 cut(s) 976
Eco24I GRGCYC 1 cut(s) 539
Eco47I GGWCC 2 cut(s) 72, 265
Eco57I CTGAAG 6 cut(s) 86, 387, 486, 812, 963, 1662
EcoNI CCTNNNNNAGG 2 cut(s) 260, 366
EcoO109I RGGNCCY 3 cut(s) 265, 535, 536
EcoRII CCWGG 6 cut(s) 346, 415, 934, 1353, 1702, 1817
EcoT14I CCWWGG 1 cut(s) 132
EcoT22I ATGCAT 1 cut(s) 1411
EcoT38I GRGCYC 1 cut(s) 539
ErhI CCWWGG 1 cut(s) 132
FaeI CATG 7 cut(s) 292, 402, 647, 689, 871, 934, 1256
FaqI GGGAC 1 cut(s) 251
FatI CATG 7 cut(s) 288, 398, 643, 685, 867, 930, 1252
FauNDI CATATG 1 cut(s) 619
FbaI TGATCA 1 cut(s) 646
FblI GTMKAC 1 cut(s) 824
Fnu4HI GCNGC 3 cut(s) 1117, 1479, 1583
FokI GGATG 6 cut(s) 828, 872, 1107, 1325, 1403, 1507
FriOI GRGCYC 1 cut(s) 539
Fsp4HI GCNGC 3 cut(s) 1117, 1479, 1583
FspBI CTAG 2 cut(s) 992, 1277
GluI GCNGC 3 cut(s) 1117, 1479, 1583
GsaI CCCAGC 1 cut(s) 393
GsuI CTGGAG 1 cut(s) 1739
HaeIII GGCC 3 cut(s) 537, 976, 1424
HapII CCGG 1 cut(s) 1492
HgaI GACGC 1 cut(s) 113
Hin1I GRCGYC 1 cut(s) 105
Hin1II CATG 7 cut(s) 292, 402, 647, 689, 871, 934, 1256
HincII GTYRAC 2 cut(s) 691, 825
HindII GTYRAC 2 cut(s) 691, 825
HindIII AAGCTT 1 cut(s) 1644
HinfI GANTC 7 cut(s) 168, 524, 614, 809, 1091, 1529, 1750
HpaII CCGG 1 cut(s) 1492
HphI GGTGA 1 cut(s) 797
Hpy166II GTNNAC 6 cut(s) 374, 691, 825, 865, 1250, 1489
Hpy188I TCNGA 6 cut(s) 103, 613, 712, 792, 1312, 1657
Hpy188III TCNNGA 9 cut(s) 7, 259, 312, 1000, 1124, 1564, 1614, 1640, 1808
Hpy8I GTNNAC 6 cut(s) 374, 691, 825, 865, 1250, 1489
Hpy99I CGWCG 1 cut(s) 107
HpyAV CCTTC 9 cut(s) 4, 256, 291, 362, 935, 987, 1063, 1081, 1705
HpyCH4III ACNGT 6 cut(s) 76, 247, 910, 1304, 1561, 1690
HpyCH4IV ACGT 1 cut(s) 693
HpyF10VI GCNNNNNNNGC 7 cut(s) 104, 395, 434, 476, 731, 898, 1313
HpyF3I CTNAG 4 cut(s) 562, 762, 1230, 1471
HpySE526I ACGT 1 cut(s) 693
Hsp92I GRCGYC 1 cut(s) 105
Hsp92II CATG 7 cut(s) 292, 402, 647, 689, 871, 934, 1256
Ksp22I TGATCA 1 cut(s) 646
Kzo9I GATC 9 cut(s) 271, 583, 638, 646, 787, 835, 1233, 1636, 1782
LmnI GCTCC 2 cut(s) 433, 1475
Lsp1109I GCAGC 2 cut(s) 1128, 1490
LweI GCATC 8 cut(s) 106, 559, 993, 1303, 1381, 1396, 1485, 1661
MabI ACCWGGT 2 cut(s) 1353, 1702
MaeI CTAG 2 cut(s) 992, 1277
MaeII ACGT 1 cut(s) 693
MaeIII GTNAC 3 cut(s) 769, 1032, 1513
MalI GATC 9 cut(s) 273, 585, 640, 648, 789, 837, 1235, 1638, 1784
MboI GATC 9 cut(s) 271, 583, 638, 646, 787, 835, 1233, 1636, 1782
MboII GAAGA 5 cut(s) 70, 79, 578, 1085, 1175
MflI RGATCY 4 cut(s) 583, 1233, 1636, 1782
MhlI GDGCHC 1 cut(s) 539
MluCI AATT 5 cut(s) 234, 505, 606, 1019, 1455
MlyI GAGTC 3 cut(s) 177, 1100, 1523
MmeI TCCRAC 1 cut(s) 126
Mph1103I ATGCAT 1 cut(s) 1411
MroXI GAANNNNTTC 3 cut(s) 87, 237, 1170
MseI TTAA 5 cut(s) 408, 473, 500, 1332, 1359
MslI CAYNNNNRTG 2 cut(s) 437, 517
MspI CCGG 1 cut(s) 1492
MspR9I CCNGG 6 cut(s) 348, 417, 936, 1355, 1704, 1819
MvaI CCWGG 6 cut(s) 348, 417, 936, 1355, 1704, 1819
MwoI GCNNNNNNNGC 7 cut(s) 104, 395, 434, 476, 731, 898, 1313
NdeI CATATG 1 cut(s) 619
NdeII GATC 9 cut(s) 271, 583, 638, 646, 787, 835, 1233, 1636, 1782
NlaIII CATG 7 cut(s) 292, 402, 647, 689, 871, 934, 1256
NlaIV GGNNCC 6 cut(s) 267, 537, 585, 1423, 1638, 1784
NmeAIII GCCGAG 1 cut(s) 880
NmuCI GTSAC 1 cut(s) 1513
NsiI ATGCAT 1 cut(s) 1411
NspI RCATGY 3 cut(s) 689, 871, 1256
PceI AGGCCT 1 cut(s) 976
PciI ACATGT 2 cut(s) 685, 1252
PcsI WCGNNNNNNNCGW 2 cut(s) 111, 734
PdmI GAANNNNTTC 3 cut(s) 87, 237, 1170
PfeI GAWTC 4 cut(s) 524, 614, 809, 1750
PfoI TCCNGGA 1 cut(s) 415
PkrI GCNGC 3 cut(s) 1118, 1480, 1584
PleI GAGTC 3 cut(s) 176, 1099, 1523
PpsI GAGTC 3 cut(s) 176, 1099, 1523
PpuMI RGGWCCY 1 cut(s) 265
PscI ACATGT 2 cut(s) 685, 1252
Psp5II RGGWCCY 1 cut(s) 265
Psp6I CCWGG 6 cut(s) 346, 415, 934, 1353, 1702, 1817
PspFI CCCAGC 1 cut(s) 389
PspGI CCWGG 6 cut(s) 346, 415, 934, 1353, 1702, 1817
PspN4I GGNNCC 6 cut(s) 267, 537, 585, 1423, 1638, 1784
PspOMI GGGCCC 1 cut(s) 535
PspPI GGNCC 5 cut(s) 72, 265, 535, 536, 1422
PspPPI RGGWCCY 1 cut(s) 265
PstNI CAGNNNCTG 1 cut(s) 50
PsuI RGATCY 4 cut(s) 583, 1233, 1636, 1782
RsaI GTAC 2 cut(s) 1251, 1684
RsaNI GTAC 2 cut(s) 1250, 1683
RseI CAYNNNNRTG 2 cut(s) 437, 517
SalI GTCGAC 1 cut(s) 823
SaqAI TTAA 5 cut(s) 408, 473, 500, 1332, 1359
SatI GCNGC 3 cut(s) 1117, 1479, 1583
Sau3AI GATC 9 cut(s) 271, 583, 638, 646, 787, 835, 1233, 1636, 1782
Sau96I GGNCC 5 cut(s) 72, 265, 535, 536, 1422
SchI GAGTC 3 cut(s) 177, 1100, 1523
ScrFI CCNGG 6 cut(s) 348, 417, 936, 1355, 1704, 1819
SduI GDGCHC 1 cut(s) 539
SexAI ACCWGGT 2 cut(s) 1353, 1702
SfaNI GCATC 8 cut(s) 106, 559, 993, 1303, 1381, 1396, 1485, 1661
SfcI CTRYAG 2 cut(s) 1050, 1449
SinI GGWCC 2 cut(s) 72, 265
SmiMI CAYNNNNRTG 2 cut(s) 437, 517
Sse9I AATT 5 cut(s) 234, 505, 606, 1019, 1455
SseBI AGGCCT 1 cut(s) 976
SsiI CCGC 3 cut(s) 404, 1114, 1582
SspMI CTAG 2 cut(s) 992, 1277
StuI AGGCCT 1 cut(s) 976
StyD4I CCNGG 6 cut(s) 346, 415, 934, 1353, 1702, 1817
StyI CCWWGG 1 cut(s) 132
TaaI ACNGT 6 cut(s) 76, 247, 910, 1304, 1561, 1690
TaiI ACGT 1 cut(s) 696
TaqI TCGA 4 cut(s) 114, 166, 313, 824
TaqII GACCGA 3 cut(s) 15, 1194, 1198
TasI AATT 5 cut(s) 234, 505, 606, 1019, 1455
TatI WGTACW 2 cut(s) 1249, 1682
TauI GCSGC 1 cut(s) 1585
TfiI GAWTC 4 cut(s) 524, 614, 809, 1750
Tru1I TTAA 5 cut(s) 408, 473, 500, 1332, 1359
Tru9I TTAA 5 cut(s) 408, 473, 500, 1332, 1359
TscAI CASTG 5 cut(s) 469, 1201, 1294, 1309, 1324
TseFI GTSAC 1 cut(s) 1513
TseI GCWGC 2 cut(s) 1116, 1478
Tsp45I GTSAC 1 cut(s) 1513
TspDTI ATGAA 3 cut(s) 277, 606, 1448
TspRI CASTG 5 cut(s) 469, 1201, 1294, 1309, 1324
VpaK11BI GGWCC 2 cut(s) 72, 265
XagI CCTNNNNNAGG 2 cut(s) 260, 366
XapI RAATTY 3 cut(s) 234, 606, 1455
XceI RCATGY 3 cut(s) 689, 871, 1256
XcmI CCANNNNNNNNNTGG 1 cut(s) 1384
XmiI GTMKAC 1 cut(s) 824
XmnI GAANNNNTTC 3 cut(s) 87, 237, 1170
XspI CTAG 2 cut(s) 992, 1277
Zsp2I ATGCAT 1 cut(s) 1411
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.