FvH4_3g43771

f-box protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
Physical Location & Seq
Forward (+)
36483852 .. 36485108
1257 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g43771.t1

Sequence Viewer

Length: 1257 bp
ATGTGCACCACCACAAGTAAAAGGAGAAGTAAAAGGAGGAGGCTTTCAAGTGAGTTGTGCACCAACACAAGCACAACCCCAACCCCAAGGCCAAACTGGTCTGATCTCCAACCTGACCTCTTGGAGTTGATCTTTGAAAAGCTCCCTGCTGAGGACGCAATTCGATTCCCAGCCGTTTGTCATTTTTGGGAACTCGCTGCAAAATCATCTGTTTCATCCACATACACACCCTTGTCGCAACAACCACCGATGCTCATATTCCCTAGTCAAGACATGTCTAGCCGACTCTTGTTCAGCTCTGCAAGGAAAAAGGTTTATAGCATTACCAACGAGTTCCCAGAAGATGACATTGTGCTTTCGTCACATGGTTGGTTACTAACGTGTGAAAAGTATTACAAAGAGTATACCAAGGTGATCTATCTCTTTAACCCGCTTTCTGGTGCTAGAATTGAACTCCCACCGATCACTGATCAGCATCGACTGCCTGTCCATAGAGCTGCGATCTCCGCTGACCCCTCTCGCAACAACAACTTCATTGTTGTCATTGTTTTGAAACTACGTGTTGATGAAACTAGGATGATATTCTTGAAGCATGGGGACACCGAATGGAAGGACTTCTGTTGGTTGCATGACCACTATGACTGCCAAGTTGATATTATGTTCTATGAAGACCAGTTATCTGTAGTGTCTAGCGACCGCATTGTGGTTTGGGACTTTCGGGAAAAACCCGATCCCACCAAAAACGAGGATTTTCCCACCATAACCAAGGATTTCCAAATCTCAGGGTTGAAGATAGAGAGACAGTGGAACATGTCCACTTATAGACTGGAGTCACAAGGTGATATAATGTTTGTGAAGAAAGTTCGAAGGAGATACTCTTTTCACTTTTATGTCTACAGATTATATGACGAGGATAAAACATGGGAAAAGGTAGAAAGTTTGATAGGCCGGGCCCTATTTCTTCAGGAAAAGCTTTCAACAATGGCATTATCTACTCGGAATTTTCCAACACTACTTGAAGGCAACTCGATTTATTTTGTAGAAATATATGAGAAGTTCAAGAAGTCCAAGGATCCCAGCCGTAATATGGCTGAGATCAGAATACTACAATACAACTTGGAGGATAAGAAGAAGCCTAAAGTGTATGAAAAGTTCAAAGTGAAGGAAGCAGACCATTATCCACCACCTTGGATTTTACCTAATCCGGTATTGCATGGGGAGAAGAAGCACAAATCAAGTGAAACTGAAGCTGATTAG

Protein Analysis

419

Amino Acids

49.31

Weight (kDa)

8.5

Isoelectric Point (pI)

48.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 97 - 355 6.9e-40 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000700)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 404, 894
AciI CCGC 3 cut(s) 431, 507, 697
AclWI GGATC 3 cut(s) 725, 1067, 1080
AcsI RAATTY 1 cut(s) 1000
AcuI CTGAAG 1 cut(s) 947
AdeI CACNNNGTG 1 cut(s) 839
AfiI CCNNNNNNNGG 4 cut(s) 151, 437, 703, 1087
AflIII ACRYGT 4 cut(s) 273, 380, 559, 810
AhdI GACNNNNNGTC 1 cut(s) 485
AluBI AGCT 5 cut(s) 142, 297, 497, 973, 1250
AluI AGCT 5 cut(s) 142, 297, 497, 973, 1250
Alw21I GWGCWC 2 cut(s) 8, 62
Alw26I GTCTC 1 cut(s) 793
Alw44I GTGCAC 2 cut(s) 4, 58
AlwI GGATC 3 cut(s) 725, 1067, 1080
AoxI GGCC 3 cut(s) 89, 946, 951
ApaI GGGCCC 1 cut(s) 955
ApaLI GTGCAC 2 cut(s) 4, 58
ApeKI GCWGC 2 cut(s) 197, 497
ApoI RAATTY 1 cut(s) 1000
Asp700I GAANNNNTTC 1 cut(s) 614
AspS9I GGNCC 2 cut(s) 951, 952
AsuC2I CCSGG 1 cut(s) 950
AsuHPI GGTGA 2 cut(s) 424, 851
AsuII TTCGAA 1 cut(s) 865
BaeGI GKGCMC 3 cut(s) 8, 62, 955
BamHI GGATCC 1 cut(s) 1072
BanII GRGCYC 1 cut(s) 955
BbsI GAAGAC 1 cut(s) 675
Bbv12I GWGCWC 2 cut(s) 8, 62
BbvCI CCTCAGC 1 cut(s) 150
BbvI GCAGC 2 cut(s) 184, 484
BceAI ACGGC 2 cut(s) 158, 1065
BclI TGATCA 1 cut(s) 469
BcnI CCSGG 1 cut(s) 950
BcoDI GTCTC 1 cut(s) 793
BfaI CTAG 5 cut(s) 264, 279, 444, 573, 690
BfmI CTRYAG 2 cut(s) 681, 895
BisI GCNGC 2 cut(s) 198, 498
BlsI GCNGC 2 cut(s) 199, 499
Bme1390I CCNGG 1 cut(s) 950
BmeRI GACNNNNNGTC 1 cut(s) 485
BmgT120I GGNCC 2 cut(s) 951, 952
BmiI GGNNCC 2 cut(s) 953, 1074
BmrFI CCNGG 1 cut(s) 950
BmsI GCATC 2 cut(s) 240, 484
BoxI GACNNNNGTC 1 cut(s) 829
BpiI GAAGAC 1 cut(s) 675
BpmI CTGGAG 1 cut(s) 848
Bpu10I CCTNAGC 1 cut(s) 150
Bpu14I TTCGAA 1 cut(s) 865
BpuMI CCSGG 1 cut(s) 950
BsaAI YACGTR 1 cut(s) 560
BsaBI GATNNNNATC 1 cut(s) 474
BsaJI CCNNGG 5 cut(s) 86, 408, 765, 1068, 1187
BsaWI WCCGGW 1 cut(s) 1204
Bsc4I CCNNNNNNNGG 4 cut(s) 151, 437, 703, 1087
Bse1I ACTGG 3 cut(s) 101, 673, 831
Bse8I GATNNNNATC 1 cut(s) 474
BseDI CCNNGG 5 cut(s) 86, 408, 765, 1068, 1187
BseGI GGATG 2 cut(s) 215, 582
BseJI GATNNNNATC 1 cut(s) 474
BseLI CCNNNNNNNGG 4 cut(s) 151, 437, 703, 1087
BseMII CTCAG 3 cut(s) 141, 795, 1083
BseNI ACTGG 3 cut(s) 101, 673, 831
BseRI GAGGAG 1 cut(s) 52
BseSI GKGCMC 3 cut(s) 8, 62, 955
BseXI GCAGC 2 cut(s) 184, 484
BseYI CCCAGC 2 cut(s) 169, 1076
Bsh1285I CGRYCG 1 cut(s) 697
BshFI GGCC 3 cut(s) 91, 948, 953
BsiEI CGRYCG 1 cut(s) 697
BsiHKAI GWGCWC 2 cut(s) 8, 62
BsiSI CCGG 2 cut(s) 949, 1205
BslFI GGGAC 2 cut(s) 611, 725
BslI CCNNNNNNNGG 4 cut(s) 151, 437, 703, 1087
BsmAI GTCTC 1 cut(s) 793
BsmFI GGGAC 2 cut(s) 611, 725
BsnI GGCC 3 cut(s) 91, 948, 953
Bsp119I TTCGAA 1 cut(s) 865
Bsp120I GGGCCC 1 cut(s) 951
Bsp1286I GDGCHC 3 cut(s) 8, 62, 955
Bsp143I GATC 9 cut(s) 103, 129, 414, 462, 469, 501, 730, 1072, 1095
BspACI CCGC 3 cut(s) 431, 507, 697
BspANI GGCC 3 cut(s) 91, 948, 953
BspCNI CTCAG 3 cut(s) 142, 794, 1084
BspLI GGNNCC 2 cut(s) 953, 1074
BspPI GGATC 3 cut(s) 725, 1067, 1080
BspT104I TTCGAA 1 cut(s) 865
BsrI ACTGG 3 cut(s) 101, 673, 831
BssECI CCNNGG 5 cut(s) 86, 408, 765, 1068, 1187
BssMI GATC 9 cut(s) 103, 129, 414, 462, 469, 501, 730, 1072, 1095
BssNAI GTATAC 1 cut(s) 405
BssT1I CCWWGG 5 cut(s) 86, 408, 765, 1068, 1187
Bst1107I GTATAC 1 cut(s) 405
Bst4CI ACNGT 1 cut(s) 804
BstAPI GCANNNNNTGC 1 cut(s) 481
BstBAI YACGTR 1 cut(s) 560
BstBI TTCGAA 1 cut(s) 865
BstDEI CTNAG 3 cut(s) 150, 781, 1092
BstF5I GGATG 2 cut(s) 215, 582
BstKTI GATC 9 cut(s) 106, 132, 417, 465, 472, 504, 733, 1075, 1098
BstMAI GTCTC 1 cut(s) 793
BstMBI GATC 9 cut(s) 103, 129, 414, 462, 469, 501, 730, 1072, 1095
BstMCI CGRYCG 1 cut(s) 697
BstMWI GCNNNNNNNGC 3 cut(s) 155, 481, 506
BstNSI RCATGY 2 cut(s) 277, 814
BstPAI GACNNNNGTC 1 cut(s) 829
BstSCI CCNGG 1 cut(s) 948
BstSFI CTRYAG 2 cut(s) 681, 895
BstSLI GKGCMC 3 cut(s) 8, 62, 955
BstV1I GCAGC 2 cut(s) 184, 484
BstV2I GAAGAC 1 cut(s) 675
BstX2I RGATCY 1 cut(s) 1072
BstXI CCANNNNNNTGG 1 cut(s) 1188
BstYI RGATCY 1 cut(s) 1072
BstZ17I GTATAC 1 cut(s) 405
BsuRI GGCC 3 cut(s) 91, 948, 953
BtsCI GGATG 2 cut(s) 215, 582
BtsIMutI CAGTG 2 cut(s) 465, 809
Cfr13I GGNCC 2 cut(s) 951, 952
CseI GACGC 1 cut(s) 164
CviAII CATG 7 cut(s) 274, 365, 593, 629, 811, 921, 1214
DdeI CTNAG 3 cut(s) 150, 781, 1092
DpnI GATC 9 cut(s) 105, 131, 416, 464, 471, 503, 732, 1074, 1097
DpnII GATC 9 cut(s) 103, 129, 414, 462, 469, 501, 730, 1072, 1095
DraIII CACNNNGTG 1 cut(s) 839
DriI GACNNNNNGTC 1 cut(s) 485
Eam1105I GACNNNNNGTC 1 cut(s) 485
Eco130I CCWWGG 5 cut(s) 86, 408, 765, 1068, 1187
Eco24I GRGCYC 1 cut(s) 955
Eco57I CTGAAG 1 cut(s) 947
EcoO109I RGGNCCY 1 cut(s) 952
EcoT14I CCWWGG 5 cut(s) 86, 408, 765, 1068, 1187
EcoT38I GRGCYC 1 cut(s) 955
ErhI CCWWGG 5 cut(s) 86, 408, 765, 1068, 1187
FaeI CATG 7 cut(s) 277, 368, 596, 632, 814, 924, 1217
FaqI GGGAC 2 cut(s) 611, 725
FatI CATG 7 cut(s) 273, 364, 592, 628, 810, 920, 1213
FauI CCCGC 1 cut(s) 438
FbaI TGATCA 1 cut(s) 469
FblI GTMKAC 2 cut(s) 404, 894
Fnu4HI GCNGC 2 cut(s) 198, 498
FokI GGATG 2 cut(s) 202, 589
FriOI GRGCYC 1 cut(s) 955
Fsp4HI GCNGC 2 cut(s) 198, 498
FspBI CTAG 5 cut(s) 264, 279, 444, 573, 690
GluI GCNGC 2 cut(s) 198, 498
GsaI CCCAGC 2 cut(s) 173, 1080
GsuI CTGGAG 1 cut(s) 848
HaeIII GGCC 3 cut(s) 91, 948, 953
HapII CCGG 2 cut(s) 949, 1205
HgaI GACGC 1 cut(s) 164
Hin1II CATG 7 cut(s) 277, 368, 596, 632, 814, 924, 1217
HindIII AAGCTT 1 cut(s) 971
HinfI GANTC 3 cut(s) 165, 285, 830
HpaII CCGG 2 cut(s) 949, 1205
HphI GGTGA 2 cut(s) 424, 851
Hpy166II GTNNAC 5 cut(s) 6, 60, 405, 816, 895
Hpy188I TCNGA 3 cut(s) 103, 999, 1100
Hpy188III TCNNGA 5 cut(s) 269, 586, 719, 965, 1060
Hpy8I GTNNAC 5 cut(s) 6, 60, 405, 816, 895
HpyAV CCTTC 4 cut(s) 604, 861, 1013, 1156
HpyCH4III ACNGT 1 cut(s) 804
HpyCH4IV ACGT 2 cut(s) 380, 559
HpyCH4V TGCA 6 cut(s) 6, 60, 200, 302, 628, 1213
HpyF10VI GCNNNNNNNGC 3 cut(s) 155, 481, 506
HpyF3I CTNAG 3 cut(s) 150, 781, 1092
HpySE526I ACGT 2 cut(s) 380, 559
Hsp92II CATG 7 cut(s) 277, 368, 596, 632, 814, 924, 1217
Ksp22I TGATCA 1 cut(s) 469
Kzo9I GATC 9 cut(s) 103, 129, 414, 462, 469, 501, 730, 1072, 1095
LmnI GCTCC 1 cut(s) 147
Lsp1109I GCAGC 2 cut(s) 184, 484
LweI GCATC 2 cut(s) 240, 484
MaeI CTAG 5 cut(s) 264, 279, 444, 573, 690
MaeII ACGT 2 cut(s) 380, 559
MaeIII GTNAC 3 cut(s) 360, 372, 831
MalI GATC 9 cut(s) 105, 131, 416, 464, 471, 503, 732, 1074, 1097
MboI GATC 9 cut(s) 103, 129, 414, 462, 469, 501, 730, 1072, 1095
MboII GAAGA 7 cut(s) 353, 680, 802, 868, 953, 1141, 1234
MflI RGATCY 1 cut(s) 1072
MhlI GDGCHC 3 cut(s) 8, 62, 955
MluCI AATT 3 cut(s) 159, 447, 1000
MlyI GAGTC 2 cut(s) 279, 839
MmeI TCCRAC 2 cut(s) 133, 1031
MnlI CCTC 8 cut(s) 30, 33, 128, 145, 526, 739, 904, 1114
MroXI GAANNNNTTC 1 cut(s) 614
MseI TTAA 1 cut(s) 426
MslI CAYNNNNRTG 1 cut(s) 888
MspA1I CMGCKG 1 cut(s) 509
MspI CCGG 2 cut(s) 949, 1205
MspR9I CCNGG 1 cut(s) 950
MwoI GCNNNNNNNGC 3 cut(s) 155, 481, 506
NciI CCSGG 1 cut(s) 950
NdeII GATC 9 cut(s) 103, 129, 414, 462, 469, 501, 730, 1072, 1095
NlaIII CATG 7 cut(s) 277, 368, 596, 632, 814, 924, 1217
NlaIV GGNNCC 2 cut(s) 953, 1074
NmuCI GTSAC 2 cut(s) 360, 831
NspI RCATGY 2 cut(s) 277, 814
NspV TTCGAA 1 cut(s) 865
PciI ACATGT 2 cut(s) 273, 810
PdmI GAANNNNTTC 1 cut(s) 614
PfeI GAWTC 1 cut(s) 165
PkrI GCNGC 2 cut(s) 199, 499
PleI GAGTC 2 cut(s) 279, 838
PpsI GAGTC 2 cut(s) 279, 838
Ppu21I YACGTR 1 cut(s) 560
PscI ACATGT 2 cut(s) 273, 810
PshAI GACNNNNGTC 1 cut(s) 829
PspFI CCCAGC 2 cut(s) 169, 1076
PspN4I GGNNCC 2 cut(s) 953, 1074
PspOMI GGGCCC 1 cut(s) 951
PspPI GGNCC 2 cut(s) 951, 952
PsrI GAACNNNNNNTAC 2 cut(s) 1136, 1168
PsuI RGATCY 1 cut(s) 1072
RseI CAYNNNNRTG 1 cut(s) 888
SaqAI TTAA 1 cut(s) 426
SatI GCNGC 2 cut(s) 198, 498
Sau3AI GATC 9 cut(s) 103, 129, 414, 462, 469, 501, 730, 1072, 1095
Sau96I GGNCC 2 cut(s) 951, 952
SchI GAGTC 2 cut(s) 279, 839
ScrFI CCNGG 1 cut(s) 950
SduI GDGCHC 3 cut(s) 8, 62, 955
SfaNI GCATC 2 cut(s) 240, 484
SfcI CTRYAG 2 cut(s) 681, 895
SfuI TTCGAA 1 cut(s) 865
SmiMI CAYNNNNRTG 1 cut(s) 888
Sse9I AATT 3 cut(s) 159, 447, 1000
SsiI CCGC 3 cut(s) 431, 507, 697
SspMI CTAG 5 cut(s) 264, 279, 444, 573, 690
StyD4I CCNGG 1 cut(s) 948
StyI CCWWGG 5 cut(s) 86, 408, 765, 1068, 1187
TaaI ACNGT 1 cut(s) 804
TaiI ACGT 2 cut(s) 383, 562
TaqI TCGA 4 cut(s) 163, 478, 865, 1028
TasI AATT 3 cut(s) 159, 447, 1000
TfiI GAWTC 1 cut(s) 165
Tru1I TTAA 1 cut(s) 426
Tru9I TTAA 1 cut(s) 426
TscAI CASTG 2 cut(s) 472, 809
TseFI GTSAC 2 cut(s) 360, 831
TseI GCWGC 2 cut(s) 197, 497
Tsp45I GTSAC 2 cut(s) 360, 831
TspDTI ATGAA 5 cut(s) 204, 523, 582, 681, 1161
TspRI CASTG 2 cut(s) 472, 809
VneI GTGCAC 2 cut(s) 4, 58
XapI RAATTY 1 cut(s) 1000
XceI RCATGY 2 cut(s) 277, 814
XcmI CCANNNNNNNNNTGG 3 cut(s) 93, 823, 1084
XmiI GTMKAC 2 cut(s) 404, 894
XmnI GAANNNNTTC 1 cut(s) 614
XspI CTAG 5 cut(s) 264, 279, 444, 573, 690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.