Prupe.1G227900_v2.0.a1

f-box protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
24117519 .. 24118908
1390 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G227900.1

Sequence Viewer

Length: 1188 bp
ATGGCTTATGCTTATTCCACCAAAAGGAGGCTAAAATATTCAAGCACAACACCAAATAAGTGGGCTGATGAGCTCCCAACTGAGCTGTTAGGGTTGATCGTGAAAAAGCTCGCTTCTAATTTCATGGACATCAGTCGCTTCAAAGCCGTCTGTTCTTCTTGGAATGGCGCTGCAAGATCGTATACCTCCGCCCCGTTGCCTCAATATCCAGGGCTCATGTACCCCTCCACGCGATGGGGTTGGAATCGGAATGGCATATGCTTCTTCAGCCTTGCAGAGAACAAGGTTTACAAGACTGAAGCGTCTCAAGGCTTTCTTAGAGTCGATTCCTTTTTGGGTTCATCACAAGGGTGGCTGGTGATGGGGAAGGGTGCTTGGACATTGGGCGAGATTCGTCTTTTCAATCCAATTTCTAGAAAAAGCAGGACGCTTCCTCCCTTGCCGCGCTGGTCTCCAATCCGTAAAGTTGTGCTTTCCTCGGACCCCTCTCGCAACAACAACTTTGTCGTTGTGGTAATTCATGAGACCTTGAACGTACCGACAAGGCTAGCATTCTATCAGCACGGCAGAGGAGGAGAAAACGCTACTGCATGGACTGAATTAGAGGGTTCACATGATCATTATTTTGATATCCTACTCCGAAACAATGGTCATTTATTTGCACTGTCCATAGACTACTCAATTCAGGTTTGGGACTTCGGAGACACCTATAATAATAATAATCCCACGAAGATCATGCATTTTCGACCTTCCATGGCTCGGAATGGTATTCACGGAACCATGATGGGGGATAAAAAATGGTTGGTGGAGTCAATGGGTGAGCTTTTGCTTGTGGAGCGGGAATGGTTGGGGGACAATATCAGAGGAACAGAGAAATTTGATGTCTACAAGTTAAACATTGCTGCCAAAACGTGGGAGAAGGTGGAATGTTTGCGTAATTGTGCTTTATTTTTGGCCAAAAATCAACCAGCAATGTCATTATCCACCCAGAAATTGCCAAGATTGAAAGAAAACTCAATTTACTTCGCAGATGAGTATCACGAGTATTCACATGGTGGTGATATTATTGATATTCATGTTCGAGGAGTATTCAACTTTGAAACTAAAGTTGTTAAGCAATACTGTATAACTGGAGCGCATAACTTTAGTTATTCATCAGCCGTTTGGATTGTGCCTAGTCCTTGGTGA

Protein Analysis

396

Amino Acids

45.16

Weight (kDa)

9.3

Isoelectric Point (pI)

40.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000700)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 301
AccB7I CCANNNNNTGG 2 cut(s) 234, 912
AccBSI CCGCTC 1 cut(s) 838
AccI GTMKAC 2 cut(s) 182, 885
AccII CGCG 2 cut(s) 232, 445
AciI CCGC 3 cut(s) 189, 443, 838
AcoI YGGCCR 1 cut(s) 954
AcsI RAATTY 1 cut(s) 875
AcuI CTGAAG 2 cut(s) 250, 318
AdeI CACNNNGTG 1 cut(s) 1055
AfaI GTAC 2 cut(s) 221, 537
AfiI CCNNNNNNNGG 6 cut(s) 24, 27, 234, 759, 786, 912
AgsI TTSAA 7 cut(s) 42, 142, 403, 532, 1006, 1093, 1100
AjnI CCWGG 1 cut(s) 208
AleI CACNNNNGTG 1 cut(s) 349
AluBI AGCT 4 cut(s) 73, 85, 109, 823
AluI AGCT 4 cut(s) 73, 85, 109, 823
Alw21I GWGCWC 1 cut(s) 75
Alw26I GTCTC 4 cut(s) 309, 456, 518, 696
AoxI GGCC 1 cut(s) 954
ApeKI GCWGC 2 cut(s) 170, 902
ApoI RAATTY 1 cut(s) 875
ArsI GACNNNNNNTTYG 2 cut(s) 634, 666
AspLEI GCGC 3 cut(s) 170, 447, 1138
AspS9I GGNCC 1 cut(s) 481
AsuHPI GGTGA 3 cut(s) 370, 830, 1070
AsuNHI GCTAGC 1 cut(s) 547
AvaII GGWCC 1 cut(s) 481
BalI TGGCCA 1 cut(s) 956
BanII GRGCYC 2 cut(s) 75, 216
BauI CACGAG 1 cut(s) 1040
Bbv12I GWGCWC 1 cut(s) 75
BbvI GCAGC 2 cut(s) 157, 889
BccI CCATC 3 cut(s) 228, 355, 778
BceAI ACGGC 3 cut(s) 131, 580, 1145
BcgI CGANNNNNNTGC 2 cut(s) 718, 752
BciT130I CCWGG 1 cut(s) 210
BclI TGATCA 1 cut(s) 616
BcoDI GTCTC 4 cut(s) 309, 456, 518, 696
BfaI CTAG 3 cut(s) 414, 548, 1176
BfoI RGCGCY 1 cut(s) 171
BisI GCNGC 3 cut(s) 171, 443, 903
BlsI GCNGC 3 cut(s) 172, 444, 904
Bme1390I CCNGG 1 cut(s) 210
Bme18I GGWCC 1 cut(s) 481
BmgT120I GGNCC 1 cut(s) 481
BmiI GGNNCC 2 cut(s) 483, 778
BmrFI CCNGG 1 cut(s) 210
BmtI GCTAGC 1 cut(s) 551
BoxI GACNNNNGTC 1 cut(s) 132
BpmI CTGGAG 1 cut(s) 1152
BpuEI CTTGAG 1 cut(s) 291
BsaBI GATNNNNATC 1 cut(s) 1035
BsaI GGTCTC 2 cut(s) 456, 518
BsaJI CCNNGG 4 cut(s) 209, 477, 753, 1181
BsaXI ACNNNNNCTCC 2 cut(s) 418, 448
Bsc4I CCNNNNNNNGG 6 cut(s) 24, 27, 234, 759, 786, 912
Bse1I ACTGG 1 cut(s) 1135
Bse3DI GCAATG 2 cut(s) 897, 978
Bse8I GATNNNNATC 1 cut(s) 1035
BseBI CCWGG 1 cut(s) 210
BseDI CCNNGG 4 cut(s) 209, 477, 753, 1181
BseJI GATNNNNATC 1 cut(s) 1035
BseLI CCNNNNNNNGG 6 cut(s) 24, 27, 234, 759, 786, 912
BseMI GCAATG 2 cut(s) 897, 978
BseMII CTCAG 1 cut(s) 72
BseNI ACTGG 1 cut(s) 1135
BseRI GAGGAG 3 cut(s) 585, 588, 1098
BseXI GCAGC 2 cut(s) 157, 889
Bsh1236I CGCG 2 cut(s) 232, 445
BshFI GGCC 1 cut(s) 956
BsiHKAI GWGCWC 1 cut(s) 75
BslFI GGGAC 2 cut(s) 707, 866
BslI CCNNNNNNNGG 6 cut(s) 24, 27, 234, 759, 786, 912
BsmAI GTCTC 4 cut(s) 309, 456, 518, 696
BsmBI CGTCTC 1 cut(s) 309
BsmFI GGGAC 2 cut(s) 707, 866
BsmI GAATGC 1 cut(s) 551
BsnI GGCC 1 cut(s) 956
Bso31I GGTCTC 2 cut(s) 456, 518
Bsp1286I GDGCHC 2 cut(s) 75, 216
Bsp143I GATC 4 cut(s) 96, 176, 616, 732
Bsp19I CCATGG 1 cut(s) 753
BspACI CCGC 3 cut(s) 189, 443, 838
BspANI GGCC 1 cut(s) 956
BspCNI CTCAG 1 cut(s) 73
BspFNI CGCG 2 cut(s) 232, 445
BspHI TCATGA 1 cut(s) 520
BspLI GGNNCC 2 cut(s) 483, 778
BspOI GCTAGC 1 cut(s) 551
BspTNI GGTCTC 2 cut(s) 456, 518
BsrBI CCGCTC 1 cut(s) 838
BsrDI GCAATG 2 cut(s) 897, 978
BsrI ACTGG 1 cut(s) 1135
BssECI CCNNGG 4 cut(s) 209, 477, 753, 1181
BssMI GATC 4 cut(s) 96, 176, 616, 732
BssNAI GTATAC 1 cut(s) 183
BssSI CACGAG 1 cut(s) 1040
BssT1I CCWWGG 2 cut(s) 753, 1181
Bst1107I GTATAC 1 cut(s) 183
Bst2BI CACGAG 1 cut(s) 1040
Bst2UI CCWGG 1 cut(s) 210
Bst4CI ACNGT 2 cut(s) 666, 1124
BstC8I GCNNGC 2 cut(s) 111, 549
BstDEI CTNAG 2 cut(s) 81, 317
BstDSI CCRYGG 1 cut(s) 753
BstFNI CGCG 2 cut(s) 232, 445
BstH2I RGCGCY 1 cut(s) 171
BstHHI GCGC 3 cut(s) 170, 447, 1138
BstKTI GATC 4 cut(s) 99, 179, 619, 735
BstMAI GTCTC 4 cut(s) 309, 456, 518, 696
BstMBI GATC 4 cut(s) 96, 176, 616, 732
BstMWI GCNNNNNNNGC 2 cut(s) 267, 835
BstNI CCWGG 1 cut(s) 210
BstPAI GACNNNNGTC 1 cut(s) 132
BstSCI CCNGG 1 cut(s) 208
BstUI CGCG 2 cut(s) 232, 445
BstV1I GCAGC 2 cut(s) 157, 889
BstXI CCANNNNNNTGG 1 cut(s) 60
BstZ17I GTATAC 1 cut(s) 183
BsuRI GGCC 1 cut(s) 956
BtgI CCRYGG 1 cut(s) 753
BtgZI GCGATG 1 cut(s) 247
BtsIMutI CAGTG 1 cut(s) 662
Cac8I GCNNGC 2 cut(s) 111, 549
CciI TCATGA 1 cut(s) 520
CfoI GCGC 3 cut(s) 170, 447, 1138
Cfr13I GGNCC 1 cut(s) 481
CseI GACGC 2 cut(s) 291, 436
Csp6I GTAC 2 cut(s) 220, 536
CviQI GTAC 2 cut(s) 220, 536
DdeI CTNAG 2 cut(s) 81, 317
DpnI GATC 4 cut(s) 98, 178, 618, 734
DpnII GATC 4 cut(s) 96, 176, 616, 732
DraIII CACNNNGTG 1 cut(s) 1055
DrdI GACNNNNNNGTC 1 cut(s) 301
DseDI GACNNNNNNGTC 1 cut(s) 301
EaeI YGGCCR 1 cut(s) 954
EciI GGCGGA 1 cut(s) 178
Ecl136II GAGCTC 1 cut(s) 73
Eco130I CCWWGG 2 cut(s) 753, 1181
Eco24I GRGCYC 2 cut(s) 75, 216
Eco31I GGTCTC 2 cut(s) 456, 518
Eco32I GATATC 1 cut(s) 631
Eco47I GGWCC 1 cut(s) 481
Eco53kI GAGCTC 1 cut(s) 73
Eco57I CTGAAG 2 cut(s) 250, 318
EcoICRI GAGCTC 1 cut(s) 73
EcoRII CCWGG 1 cut(s) 208
EcoRV GATATC 1 cut(s) 631
EcoT14I CCWWGG 2 cut(s) 753, 1181
EcoT22I ATGCAT 1 cut(s) 741
EcoT38I GRGCYC 2 cut(s) 75, 216
ErhI CCWWGG 2 cut(s) 753, 1181
Esp3I CGTCTC 1 cut(s) 309
FalI AAGNNNNNCTT 4 cut(s) 300, 332, 456, 488
FaqI GGGAC 2 cut(s) 707, 866
FauI CCCGC 1 cut(s) 831
FauNDI CATATG 1 cut(s) 257
FbaI TGATCA 1 cut(s) 616
FblI GTMKAC 2 cut(s) 182, 885
Fnu4HI GCNGC 3 cut(s) 171, 443, 903
FriOI GRGCYC 2 cut(s) 75, 216
Fsp4HI GCNGC 3 cut(s) 171, 443, 903
FspBI CTAG 3 cut(s) 414, 548, 1176
GlaI GCGC 3 cut(s) 169, 446, 1137
GluI GCNGC 3 cut(s) 171, 443, 903
GsuI CTGGAG 1 cut(s) 1152
HaeII RGCGCY 1 cut(s) 171
HaeIII GGCC 1 cut(s) 956
HgaI GACGC 2 cut(s) 291, 436
HhaI GCGC 3 cut(s) 170, 447, 1138
Hin6I GCGC 3 cut(s) 168, 445, 1136
HinP1I GCGC 3 cut(s) 168, 445, 1136
HinfI GANTC 5 cut(s) 244, 321, 326, 391, 809
HphI GGTGA 3 cut(s) 370, 830, 1070
Hpy166II GTNNAC 4 cut(s) 183, 289, 611, 886
Hpy188I TCNGA 6 cut(s) 249, 481, 641, 701, 762, 863
Hpy188III TCNNGA 4 cut(s) 100, 414, 521, 1040
Hpy8I GTNNAC 4 cut(s) 183, 289, 611, 886
HpyAV CCTTC 3 cut(s) 361, 759, 913
HpyCH4III ACNGT 2 cut(s) 666, 1124
HpyCH4IV ACGT 2 cut(s) 534, 911
HpyCH4V TGCA 5 cut(s) 173, 275, 590, 662, 739
HpyF10VI GCNNNNNNNGC 2 cut(s) 267, 835
HpyF3I CTNAG 2 cut(s) 81, 317
HpySE526I ACGT 2 cut(s) 534, 911
HspAI GCGC 3 cut(s) 168, 445, 1136
Ksp22I TGATCA 1 cut(s) 616
Kzo9I GATC 4 cut(s) 96, 176, 616, 732
LmnI GCTCC 3 cut(s) 78, 835, 1133
LpnPI CCDG 9 cut(s) 195, 222, 341, 409, 433, 671, 981, 1001, 1116
Lsp1109I GCAGC 2 cut(s) 157, 889
MaeI CTAG 3 cut(s) 414, 548, 1176
MaeII ACGT 2 cut(s) 534, 911
MalI GATC 4 cut(s) 98, 178, 618, 734
MbiI CCGCTC 1 cut(s) 838
MboI GATC 4 cut(s) 96, 176, 616, 732
MboII GAAGA 3 cut(s) 147, 256, 742
MhlI GDGCHC 2 cut(s) 75, 216
MlsI TGGCCA 1 cut(s) 956
MluCI AATT 9 cut(s) 118, 408, 516, 599, 681, 875, 937, 992, 1017
MluNI TGGCCA 1 cut(s) 956
MlyI GAGTC 2 cut(s) 330, 818
MmeI TCCRAC 1 cut(s) 221
Mox20I TGGCCA 1 cut(s) 956
Mph1103I ATGCAT 1 cut(s) 741
MscI TGGCCA 1 cut(s) 956
MseI TTAA 2 cut(s) 893, 1113
MslI CAYNNNNRTG 2 cut(s) 349, 1056
Msp20I TGGCCA 1 cut(s) 956
MspR9I CCNGG 1 cut(s) 210
Mva1269I GAATGC 1 cut(s) 551
MvaI CCWGG 1 cut(s) 210
MvnI CGCG 2 cut(s) 232, 445
MwoI GCNNNNNNNGC 2 cut(s) 267, 835
NcoI CCATGG 1 cut(s) 753
NdeI CATATG 1 cut(s) 257
NdeII GATC 4 cut(s) 96, 176, 616, 732
NheI GCTAGC 1 cut(s) 547
NlaIV GGNNCC 2 cut(s) 483, 778
NsiI ATGCAT 1 cut(s) 741
OliI CACNNNNGTG 1 cut(s) 349
PagI TCATGA 1 cut(s) 520
PctI GAATGC 1 cut(s) 551
PfeI GAWTC 3 cut(s) 244, 326, 391
PflMI CCANNNNNTGG 2 cut(s) 234, 912
PkrI GCNGC 3 cut(s) 172, 444, 904
PleI GAGTC 2 cut(s) 329, 817
PpsI GAGTC 2 cut(s) 329, 817
PshAI GACNNNNGTC 1 cut(s) 132
Psp124BI GAGCTC 1 cut(s) 75
Psp6I CCWGG 1 cut(s) 208
PspGI CCWGG 1 cut(s) 208
PspN4I GGNNCC 2 cut(s) 483, 778
PspPI GGNCC 1 cut(s) 481
PsrI GAACNNNNNNTAC 2 cut(s) 272, 304
RsaI GTAC 2 cut(s) 221, 537
RsaNI GTAC 2 cut(s) 220, 536
RseI CAYNNNNRTG 2 cut(s) 349, 1056
SacI GAGCTC 1 cut(s) 75
SaqAI TTAA 2 cut(s) 893, 1113
SatI GCNGC 3 cut(s) 171, 443, 903
Sau3AI GATC 4 cut(s) 96, 176, 616, 732
Sau96I GGNCC 1 cut(s) 481
SchI GAGTC 2 cut(s) 330, 818
ScrFI CCNGG 1 cut(s) 210
SduI GDGCHC 2 cut(s) 75, 216
SinI GGWCC 1 cut(s) 481
SmiMI CAYNNNNRTG 2 cut(s) 349, 1056
SmlI CTYRAG 1 cut(s) 306
SmoI CTYRAG 1 cut(s) 306
Sse9I AATT 9 cut(s) 118, 408, 516, 599, 681, 875, 937, 992, 1017
SsiI CCGC 3 cut(s) 189, 443, 838
SspI AATATT 1 cut(s) 38
SspMI CTAG 3 cut(s) 414, 548, 1176
SstI GAGCTC 1 cut(s) 75
StyD4I CCNGG 1 cut(s) 208
StyI CCWWGG 2 cut(s) 753, 1181
TaaI ACNGT 2 cut(s) 666, 1124
TaiI ACGT 2 cut(s) 537, 914
TaqI TCGA 3 cut(s) 324, 745, 1081
TasI AATT 9 cut(s) 118, 408, 516, 599, 681, 875, 937, 992, 1017
TauI GCSGC 1 cut(s) 445
TfiI GAWTC 3 cut(s) 244, 326, 391
Tru1I TTAA 2 cut(s) 893, 1113
Tru9I TTAA 2 cut(s) 893, 1113
TscAI CASTG 1 cut(s) 669
TseI GCWGC 2 cut(s) 170, 902
TspDTI ATGAA 5 cut(s) 112, 330, 509, 1064, 1143
TspGWI ACGGA 2 cut(s) 449, 789
TspRI CASTG 1 cut(s) 669
Van91I CCANNNNNTGG 2 cut(s) 234, 912
VpaK11BI GGWCC 1 cut(s) 481
XapI RAATTY 1 cut(s) 875
XbaI TCTAGA 1 cut(s) 413
XmiI GTMKAC 2 cut(s) 182, 885
XspI CTAG 3 cut(s) 414, 548, 1176
Zsp2I ATGCAT 1 cut(s) 741
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.